Pregenerated sensors for HTRA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006205Ensembl transcript IDs: ENSMUST00000006367.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCCGCAAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTaGACAAGCAAAATGTTGGACAAAGGTCCCGGGTGTCCTGCGTCA | + |
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Preference number: 1 (lower is better) Translates to: CPQTIKKDSVGRGVP*TSKMLDKGPGCPAS Trigger: TGACGCAGGACACCCGGGACCTTTGTCCAACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTTGCGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CCA 90 bp | AGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTaGACAAAGGTCCCGGGTGTCCTGCGTCACCAGCTCAGTTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: RRILSAGVFPEQAKC*TKVPGVLRHQLSSH Trigger: ATGAGAACTGAGCTGGTGACGCAGGACACCCGGGACCTTTGTCCAACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR GCA 90 bp | GAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTTaGCCGCAAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: EGRTSACAPATLHLF*PQTIKKDSVGRGVP Trigger: GGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR GCA 90 bp | AAGCACGCTGCATACATAGCATACAGAAGGCAGGACTTCTGCCTGTaGACCTGCAACATTACATTTGTTTTGCCCGCAAACTATCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: KHAAYIAYRRQDFCL*TCNITFVLPANYQE Trigger: TTCTTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTATGCTATGTATGCAGCGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGGCCCAAGACCATGGCTaGGAGGACCTTCCTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RGIFGHLRSQGHPPVVSGAQDHG*EDLPLA Trigger: GGCAAGAGGAAGGTCCTCGCAGCCATGGTCTTGGGC...CCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGCATCAAATTCCTCTGAGATCCCCTGGAGTCTTTaGGGGAAACATGAAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SQKPGSPTCGLGASNSSEIPWSL*GKHEVW Trigger: CCAGACTTCATGTTTCCCTCAAAGACTCCAGGGGAT...CTCAGAGGAATTTGATGCCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGGGAAGGGACAAATGTTaGCTGTGTAAGCAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: RGIFGHLRSQGHPPVVSGGRDKC*LCKQEQ Trigger: CTGTTCCTGCTTACACAGTCAACATTTGTCCCTTCC...CCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTTCTTTGAGGGAAACATaGAGTCTGGCTCCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: IPKRHFWPSQKPGSPTCGSLRET*SLAPAS Trigger: AGAGGCAGGAGCCAGACTTCATGTTTCCCTCAAAGA...ACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR GCA 90 bp | AACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTAGGTCCCGGGTGTCCTaGGTCACCAGCTCAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NYQEGFCRQGCSLNKQNVRSRVS*VTSSVL Trigger: GAGAACTGAGCTGGTGACGCAGGACACCCGGGACCT...AACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CAA 90 bp | AGAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTaGCCCGCAAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RRQDFCLCTCNITFV*PANYQEGFCRQGCS Trigger: GGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CAA 90 bp | CATACAGAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTaGTTTTGCCCGCAAACTATCAAGAAGGATTCTGTCGGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HTEGRTSACAPATLH*FCPQTIKKDSVGRG Trigger: ACCCCTGCCGACAGAATCCTTCTTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR GCA 90 bp | AACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTCCAGCTCAGTTCTCATaGGCCATCCCCTGGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: NYQEGFCRQGCSLNKQNVPAQFS*AIPWSL Trigger: AAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGG...AACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CCA 72 bp | CTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTaGACAAAGGTCCCGGGTGTCCTGCGTCACCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: LSAGVFPEQAKC*TKVPGVLRHQL Trigger: GAGCTGGTGACGCAGGACACCCGGGACCTTTGTCCAACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR GCA 72 bp | AACAAGCAAAATGTTGGACAAAGGTCCCGGGTGTCCTaGGTCACCAGCTCAGTTCTCATGCGCCATCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: NKQNVGQRSRVS*VTSSVLMRHPL Trigger: CAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGACACCCGGGACCTTTGTCCAACATTTTGCTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CCA 72 bp | TGTACTCCGGGTTCCAGGATTCCTAAGAGGCATTTTTaGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CTPGSRIPKRHF*PSQKPGSPTCG Trigger: ACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGGAACCCGGAGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR TCA 72 bp | ACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTaGACAAGCAAAATGTTGGACAAAGGTCCCGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: TIKKDSVGRGVP*TSKMLDKGPGC Trigger: ACACCCGGGACCTTTGTCCAACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTCCTGCAACATTACATTaGTTTTGCCCGCAAACTATC | + |
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Preference number: 3 (lower is better) Translates to: IPKRHFWPSQKPGSPTCGPATLH*FCPQTI Trigger: GATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGG...ACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR GCA 72 bp | GCATACATAGCATACAGAAGGCAGGACTTCTGCCTGTaGACCTGCAACATTACATTTGTTTTGCCCGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: AYIAYRRQDFCL*TCNITFVLPAN Trigger: GTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTATGCTATGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR GCA 72 bp | ATAGCATACAGAAGGCAGGACTTCTGCCTGTGCACCTaGAACATTACATTTGTTTTGCCCGCAAACTATCAA | + |
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Preference number: 3 (lower is better) Translates to: IAYRRQDFCLCT*NITFVLPANYQ Trigger: TTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTATGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | CCCGGGTGTCCTGCGTCACCAGCTCAGTTCTCATGCGCCATCCCCTGGAGTCTTAAGGGCACTACGCATTaGAGCCCCTCGCCGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PGCPASPAQFSCAIPWSLKGTTH*SPSPQG Trigger: TCCCTGCGGCGAGGGGCTGCAATGCGTAGTGCCCTT...AAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGACACCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | CTCCGGGTTCCAGGATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCCGCAGGGACCCTCCTaGAGGCCGCACGCTGCACCC | + |
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Preference number: 4 (lower is better) Translates to: LRVPGFLRGIFGHLRSQGPQGPS*RPHAAP Trigger: GGGTGCAGCGTGCGGCCTGCAGGAGGGTCCCTGCGG...ACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGGAACCCGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | CCAGGATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTCGCGCCGTCGTACTGTaGCCGAGGCCGGCACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PGFLRGIFGHLRSQGHPPRAVVL*PRPAPR Trigger: TCGGGGTGCCGGCCTCGGCCACAGTACGACGGCGCG...AGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR TCA 90 bp | GCCCGCAAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCACGCGCTGCAGGACGATaGCCGGCGGCTGGCGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ARKLSRRILSAGVFPEQARAAGR*PAAGEA Trigger: AGCTTCGCCAGCCGCCGGTCATCGTCCTGCAGCGCG...TGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTTGCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | CCAGGATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTCACACACCGGCTCGCTaGTGGCACACACGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: PGFLRGIFGHLRSQGHPPHTPAR*WHTRTG Trigger: GCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGTGTG...AGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | GGAACAGCCCAAGCTTGTAAGGAAAAGCACGCTGCATACATAGCATACAGAAGGTCTCGGAGCGGCGGCTaGCGGCGCGCAGCTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: GTAQACKEKHAAYIAYRRSRSGG*RRAAGT Trigger: TGTGCCAGCTGCGCGCCGCCAGCCGCCGCTCCGAGA...CCTTCTGTATGCTATGTATGCAGCGTGCTTTTCCTTACAAGCTTGGGCTGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | ATACAGAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTTGCCCTGCAGGCCGCACGCTaGACCCTCGAGCGCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: IQKAGLLPVHLQHYICFALQAAR*TLERAA Trigger: TGCGGCGCGCTCGAGGGTGCAGCGTGCGGCCTGCAG...GGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | GTCCTGCGTCACCAGCTCAGTTCTCATGCGCCATCCCCTGGAGTCTTTGAGGGACTTATCGGATGGAATTaGGAAGGAGATGCCCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: VLRHQLSSHAPSPGVFEGLIGWN*EGDARR Trigger: ACGGCGGGCATCTCCTTCGCAATTCCATCCGATAAG...TCCCTCAAAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | CTCCGGGTTCCAGGATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTGCAGCTGGCACAGGTTaGTGTAGGTCTTGGCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LRVPGFLRGIFGHLRSQGAAGTG*CRSWRR Trigger: GCGACGCCAAGACCTACACCAACCTGTGCCAGCTGC...ACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGGAACCCGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | CGGGTGTCCTGCGTCACCAGCTCAGTTCTCATGCGCCATCCCCTGGAGTCTTTGTATGACGCAAACTGTTaGGATCTTCCTGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RVSCVTSSVLMRHPLESLYDANC*DLPALG Trigger: GCCAAGGGCAGGAAGATCCCAACAGTTTGCGTCATA...CAAAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGACACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | GGAACAGCCCAAGCTTGTAAGGAAAAGCACGCTGCATACATAGCATACAGAAGGACGATGACCGGCGGCTaGCGAAGCTTCTCGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GTAQACKEKHAAYIAYRRTMTGG*RSFSER Trigger: CCGCTCCGAGAAGCTTCGCCAGCCGCCGGTCATCGT...CCTTCTGTATGCTATGTATGCAGCGTGCTTTTCCTTACAAGCTTGGGCTGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR TCA 90 bp | CGGGTGTCCTGCGTCACCAGCTCAGTTCTCATGCGCCATCCCCTGGAGTCTTTGTATACTTCTTCTTGGTaGCAGCTTTCCCTTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RVSCVTSSVLMRHPLESLYTSSW*QLSLWP Trigger: AGGCCAAAGGGAAAGCTGTCACCAAGAAGAAGTATA...CAAAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGACACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | GGAACAGCCCAAGCTTGTAAGGAAAAGCACGCTGCATACATAGCATACAGAAGGGAAGTCCCAGCTCTTTaGCGCCTCGCTGGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GTAQACKEKHAAYIAYRREVPAL*RLAGWC Trigger: GCACCACCCAGCGAGGCGGCAAAGAGCTGGGACTTC...CCTTCTGTATGCTATGTATGCAGCGTGCTTTTCCTTACAAGCTTGGGCTGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | AAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTACACCGGCTCGCTGCTaGCACACACGCACAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KLSRRILSAGVFPEQAKCTPARC*HTRTGR Trigger: CCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGT...ACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR TCA 90 bp | ATAGCATACAGAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTCCAGGTCTCAGCTCTaGGGAGCGGCCGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IAYRRQDFCLCTCNITFVSRSQL*GAAEQQ Trigger: CTGCTGCTCGGCCGCTCCTCAGAGCTGAGACCTGGA...AACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTATGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR TCA 90 bp | CCCGGGTGTCCTGCGTCACCAGCTCAGTTCTCATGCGCCATCCCCTGGAGTCTTATAAAGTTGTACTTATaGCGCAAACTGTTGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: PGCPASPAQFSCAIPWSLIKLYL*RKLLGS Trigger: AGATCCCAACAGTTTGCGTCATAAGTACAACTTTAT...AAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGACACCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR TCA 90 bp | CATCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGCATCAAATTCCTCTGTTGTTGGTGACCACGTaGGCATTTGTCACAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: HLRSQGHPPVVSGHQIPLLLVTT*AFVTIS Trigger: ACTGATTGTGACAAATGCTCACGTGGTCACCAACAA...CAGAGGAATTTGATGCCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | CATCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGCATCAAATTCCTCTGAAAAGGGGCTTCCAATaGCAACTACAAATTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HLRSQGHPPVVSGHQIPLKRGFQ*QLQILQ Trigger: CTGGAGAATTTGTAGTTGCCATTGGAAGCCCCTTTT...CAGAGGAATTTGATGCCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | AAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTCTTTGCCGCCTCGCTaGGTGGTGCTGACGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLSRRILSAGVFPEQAKCSLPPR*VVLTIP Trigger: TGGGATCGTCAGCACCACCCAGCGAGGCGGCAAAGA...ACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR TCA 90 bp | AACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTTCCGGGAAGTCTCGGTaGCGGTCCTTCAGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NYQEGFCRQGCSLNKQNVSGKSR*RSFSSL Trigger: CAAAGAGCTGAAGGACCGTCACCGAGACTTCCCGGA...AACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | ATAGCATACAGAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTGTCTTCATTGCCCCTaGGGACAACCATGTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IAYRRQDFCLCTCNITFVCLHCP*GQPCSG Trigger: CCCTGAACATGGTTGTCCGCAGGGGCAATGAAGACA...AACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTATGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | CGCAAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAAACTGGCAGCTTTCCCTaGTGGTCAATCTTGATAAGC | + |
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Preference number: 4 (lower is better) Translates to: RKLSRRILSAGVFPEQAKTGSFP*WSILIS Trigger: GCTTATCAAGATTGACCACCAGGGAAAGCTGCCAGT...TTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR GCA 90 bp | CCAGGATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTTCGAGAAAGGAAGCTTaGGATATAGTTCAATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PGFLRGIFGHLRSQGHPPSRKEA*DIVQCE Trigger: TTCACATTGAACTATATCGCAAGCTTCCTTTCTCGA...AGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CAA 72 bp | GACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTaGCCCGCAAACTATCAAGAAGGATTCTGTCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DFCLCTCNITFV*PANYQEGFCRQ Trigger: CTGCCGACAGAATCCTTCTTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| 3UTR CAA 72 bp | GGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTaGTTTTGCCCGCAAACTATCAAGAAGGATTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GRTSACAPATLH*FCPQTIKKDSV Trigger: GACAGAATCCTTCTTGATAGTTTGCGGGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CCA 90 bp | AACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTTTGGCCTGTCGATCGTaGGACTCTGTCAAGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: NYQEGFCRQGCSLNKQNVLACRS*DSVKNF Trigger: AAAGTTCTTGACAGAGTCCCACGATCGACAGGCCAA...AACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 90 bp | CCCTCGCAGTCCGTGGGCGGCGGGGCGCAGCGGGTGGGATCGCAGTaGTCGGGACAGACGGTGGCAGCTGGGGCCGAGCGGCCGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: PSQSVGGGAQRVGSQ*SGQTVAAGAERPVP Trigger: GGGGACCGGCCGCTCGGCCCCAGCTGCCACCGTCTGTCCCGAGCACTGCGATCCCACCCGCTGCGCCCCGCCGCCCACGGACTGCGAGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 90 bp | GGACGCGGCCACCCTCGCAGTCCGTGGGCGGCGGGGCGCAGCGGGTaGGATCGCAGTGCTCGGGACAGACGGTGGCAGCTGGGGCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: GRGHPRSPWAAGRSG*DRSARDRRWQLGPS Trigger: GCTCGGCCCCAGCTGCCACCGTCTGTCCCGAGCACTGCGATCCCACCCGCTGCGCCCCGCCGCCCACGGACTGCGAGGGTGGCCGCGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 90 bp | CCGAAGGGCACTACGCATTGCAGCCCCTCGCCGCAGGGACCCTCCTaGAGGCCGCACGCTGCACCCTCGAGCGCGCCGCACACCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PKGTTHCSPSPQGPS*RPHAAPSSAPHTSQ Trigger: CTGCGAGGTGTGCGGCGCGCTCGAGGGTGCAGCGTGCGGCCTGCAGGAGGGTCCCTGCGGCGAGGGGCTGCAATGCGTAGTGCCCTTCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 90 bp | ACCACACACCGGCTCGCTGCTGGCACACACGCACAGGCCGGCCTGTaGGCGCCGTCGTACTGTGGCCGAGGCCGGCACCCCGAAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TTHRLAAGTHAQAGL*APSYCGRGRHPEGH Trigger: GTGCCCTTCGGGGTGCCGGCCTCGGCCACAGTACGACGGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGTGTGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 90 bp | TGCTGGCACACACGCACAGGCCGGCCTGTGCGCGCCGTCGTACTGTaGCCGAGGCCGGCACCCCGAAGGGCACTACGCATTGCAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CWHTRTGRPVRAVVL*PRPAPRRALRIAAP Trigger: AGGGGCTGCAATGCGTAGTGCCCTTCGGGGTGCCGGCCTCGGCCACAGTACGACGGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 90 bp | GGTTGGTGTAGGTCTTGGCGTCGCTACCACACACCGGCTCGCTGCTaGCACACACGCACAGGCCGGCCTGTGCGCGCCGTCGTACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWCRSWRRYHTPARC*HTRTGRPVRAVVLW Trigger: CCACAGTACGACGGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGTGTGGTAGCGACGCCAAGACCTACACCAACC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 90 bp | ACAGGTTGGTGTAGGTCTTGGCGTCGCTACCACACACCGGCTCGCTaGTGGCACACACGCACAGGCCGGCCTGTGCGCGCCGTCGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: TGWCRSWRRYHTPAR*WHTRTGRPVRAVVL Trigger: CAGTACGACGGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGTGTGGTAGCGACGCCAAGACCTACACCAACCTGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | CCCGGGTGTCCTGCGTCACCAGCTCAGTTCTCATGCGCCATCCCCTGGAGTCTTCGAAGTCCCAGCTCTTaGCCGCCTCGCTGGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCPASPAQFSCAIPWSLRSPSS*PPRWVV Trigger: CACCACCCAGCGAGGCGGCAAAGAGCTGGGACTTCG...AAGACTCCAGGGGATGGCGCATGAGAACTGAGCTGGTGACGCAGGACACCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | ATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTGGGATCTTCCTGCCCTaGGCCGCAGGCGCCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPKRHFWPSQKPGSPTCGGIFLP*AAGAAL Trigger: CAGCGCGGCGCCTGCGGCCAAGGGCAGGAAGATCCC...ACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | CTCCGGGTTCCAGGATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTGAAGGGCACTACGCATaGCAGCCCCTCGCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRVPGFLRGIFGHLRSQGEGHYA*QPLAAG Trigger: CCCTGCGGCGAGGGGCTGCAATGCGTAGTGCCCTTC...ACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAATCCTGGAACCCGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 90 bp | AAAGGGGCTTCCAATGGCAACTACAAATTCTCCAGGTCTCAGCTCTaGGGAGCGGCCGAGCAGCAGGACTGGCAGCTTTCCCTGGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGASNGNYKFSRSQL*GAAEQQDWQLSLVV Trigger: GACCACCAGGGAAAGCTGCCAGTCCTGCTGCTCGGCCGCTCCTCAGAGCTGAGACCTGGAGAATTTGTAGTTGCCATTGGAAGCCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 90 bp | CCCTCCGGCTTCTGCCGGGGTGTCAGGAATGACTTCAATGATATATaGCCCAGAGAGCACATCCGGGAAGTCTCGGTGACGGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSGFCRGVRNDFNDI*PREHIREVSVTVLQ Trigger: CTGAAGGACCGTCACCGAGACTTCCCGGATGTGCTCTCTGGGGCATATATCATTGAAGTCATTCCTGACACCCCGGCAGAAGCCGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGCCCTGGTGGTCAATCTaGATAAGCGCAATGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGIFGHLRSQGHPPVVSGPWWSI*ISAMSA Trigger: GGCGGACATTGCGCTTATCAAGATTGACCACCAGGG...CCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 90 bp | CTCAGCTCTGAGGAGCGGCCGAGCAGCAGGACTGGCAGCTTTCCCTaGTGGTCAATCTTGATAAGCGCAATGTCCGCCTTTTCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSSEERPSSRTGSFP*WSILISAMSAFSST Trigger: TGTGGATGAAAAGGCGGACATTGCGCTTATCAAGATTGACCACCAGGGAAAGCTGCCAGTCCTGCTGCTCGGCCGCTCCTCAGAGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTCTCGGGGCGGTCCTTCAGCTCTTaGGCTTTGCTAGATGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGIFGHLRSQGHPPVVSGRSFSS*ALLDVS Trigger: GCTCACATCTAGCAAAGCCAAAGAGCTGAAGGACCG...CCCCGAGACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 90 bp | GTGAGCATTTGTCACAATCAGTCCATCCTCCGATACGATGAATCCTaGCCCACTGGCCACTGGCACCTCCCTCTTCGAGAAAGGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSICHNQSILRYDES*PTGHWHLPLRERKL Trigger: AAGCTTCCTTTCTCGAAGAGGGAGGTGCCAGTGGCCAGTGGGTCAGGATTCATCGTATCGGAGGATGGACTGATTGTGACAAATGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 90 bp | ACTTCAATGATATATGCCCCAGAGAGCACATCCGGGAAGTCTCGGTaGCGGTCCTTCAGCTCTTTGGCTTTGCTAGATGTGAGCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: TSMIYAPESTSGKSR*RSFSSLALLDVSDI Trigger: GATGTCGCTCACATCTAGCAAAGCCAAAGAGCTGAAGGACCGTCACCGAGACTTCCCGGATGTGCTCTCTGGGGCATATATCATTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 90 bp | CCATTCTTCAGCTCAACCTTGACCCGGTTTTTGTTGGTGACCACGTaGGCATTTGTCACAATCAGTCCATCCTCCGATACGATGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFFSSTLTRFLLVTT*AFVTISPSSDTMNP Trigger: AGGATTCATCGTATCGGAGGATGGACTGATTGTGACAAATGCTCACGTGGTCACCAACAAAAACCGGGTCAAGGTTGAGCTGAAGAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | ATTCCTAAGAGGCATTTTTGGCCATCTCAGAAGCCAGGGTCACCCACCTGTGGTCCAATATACTTCTTCTaGGTGACAGCTTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPKRHFWPSQKPGSPTCGPIYFF*VTAFPL Trigger: CAAAGGGAAAGCTGTCACCAAGAAGAAGTATATTGG...ACCACAGGTGGGTGACCCTGGCTTCTGAGATGGCCAAAAATGCCTCTTAGGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | GGAACAGCCCAAGCTTGTAAGGAAAAGCACGCTGCATACATAGCATACAGAAGGAGGGTGTTCTCCTTTTaGATGACATCGCTGACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTAQACKEKHAAYIAYRRRVFSF*MTSLTS Trigger: TGACGTCAGCGATGTCATCAAAAAGGAGAACACCCT...CCTTCTGTATGCTATGTATGCAGCGTGCTTTTCCTTACAAGCTTGGGCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | ATACAGAAGGCAGGACTTCTGCCTGTGCACCTGCAACATTACATTTGTTTTGCCTTCTTCAGCTCAACCTaGACCCGGTTTTTGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IQKAGLLPVHLQHYICFAFFSST*TRFLLV Trigger: CACCAACAAAAACCGGGTCAAGGTTGAGCTGAAGAA...GGCAAAACAAATGTAATGTTGCAGGTGCACAGGCAGAAGTCCTGCCTTCTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | AAACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTATCACAATGTCTTCATaGCCCCTGCGGACAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: KLSRRILSAGVFPEQAKCITMSS*PLRTTM Trigger: CATGGTTGTCCGCAGGGGCAATGAAGACATTGTGAT...ACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS-3UTR CAA 90 bp | AACTATCAAGAAGGATTCTGTCGGCAGGGGTGTTCCCTGAACAAGCAAAATGTTAGTGGTGACTGTGTTTaGAAGAGAAAAGGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NYQEGFCRQGCSLNKQNVSGDCV*KRKGAS Trigger: GGAAGCCCCTTTTCTCTTCAAAACACAGTCACCACT...AACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGAATCCTTCTTGATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 72 bp | CGCACGCGTCGCGGACGCGGCCACCCTCGCAGTCCGTaGGCGGCGGGGCGCAGCGGGTGGGATCGCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTRRGRGHPRSP*AAGRSGWDRSA Trigger: AGCACTGCGATCCCACCCGCTGCGCCCCGCCGCCCACGGACTGCGAGGGTGGCCGCGTCCGCGACGCGTGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | TCCGTGGGCGGCGGGGCGCAGCGGGTGGGATCGCAGTaGTCGGGACAGACGGTGGCAGCTGGGGCCGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SVGGGAQRVGSQ*SGQTVAAGAER Trigger: CCGCTCGGCCCCAGCTGCCACCGTCTGTCCCGAGCACTGCGATCCCACCCGCTGCGCCCCGCCGCCCACGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 72 bp | CCTGCCCTTGGCCGCAGGCGCCGCGCTGCAGGACGATaGCCGGCGGCTGGCGAAGCTTCTCGGAGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PALGRRRRAAGR*PAAGEASRSGG Trigger: GCCGCCGCTCCGAGAAGCTTCGCCAGCCGCCGGTCATCGTCCTGCAGCGCGGCGCCTGCGGCCAAGGGCAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | CGGCTCGCTGCTGGCACACACGCACAGGCCGGCCTGTaGGCGCCGTCGTACTGTGGCCGAGGCCGGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLAAGTHAQAGL*APSYCGRGRHP Trigger: GGGGTGCCGGCCTCGGCCACAGTACGACGGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | ACTACGCATTGCAGCCCCTCGCCGCAGGGACCCTCCTaGAGGCCGCACGCTGCACCCTCGAGCGCGCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TTHCSPSPQGPS*RPHAAPSSAPH Trigger: GTGCGGCGCGCTCGAGGGTGCAGCGTGCGGCCTGCAGGAGGGTCCCTGCGGCGAGGGGCTGCAATGCGTAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | TGTGGCCGAGGCCGGCACCCCGAAGGGCACTACGCATaGCAGCCCCTCGCCGCAGGGACCCTCCTGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CGRGRHPEGHYA*QPLAAGTLLQA Trigger: GGCCTGCAGGAGGGTCCCTGCGGCGAGGGGCTGCAATGCGTAGTGCCCTTCGGGGTGCCGGCCTCGGCCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 90 bp | CCGTCGTACTGTGGCCGAGGCCGGCACCCCGAAGGGCACTACGCATaGCAGCCCCTCGCCGCAGGGACCCTCCTGCAGGCCGCACGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSYCGRGRHPEGHYA*QPLAAGTLLQAARC Trigger: GCAGCGTGCGGCCTGCAGGAGGGTCCCTGCGGCGAGGGGCTGCAATGCGTAGTGCCCTTCGGGGTGCCGGCCTCGGCCACAGTACGACGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 72 bp | ACACGCACAGGCCGGCCTGTGCGCGCCGTCGTACTGTaGCCGAGGCCGGCACCCCGAAGGGCACTACGCATT | + |
|
Preference number: 6 (lower is better) Translates to: TRTGRPVRAVVL*PRPAPRRALRI Trigger: AATGCGTAGTGCCCTTCGGGGTGCCGGCCTCGGCCACAGTACGACGGCGCGCACAGGCCGGCCTGTGCGTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 72 bp | AGGTCTTGGCGTCGCTACCACACACCGGCTCGCTGCTaGCACACACGCACAGGCCGGCCTGTGCGCGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSWRRYHTPARC*HTRTGRPVRAV Trigger: GACGGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGTGTGGTAGCGACGCCAAGACCT 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | TGTAGGTCTTGGCGTCGCTACCACACACCGGCTCGCTaGTGGCACACACGCACAGGCCGGCCTGTGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: CRSWRRYHTPAR*WHTRTGRPVRA Trigger: GGCGCGCACAGGCCGGCCTGTGCGTGTGTGCCAGCAGCGAGCCGGTGTGTGGTAGCGACGCCAAGACCTACA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | TTGGGATCTTCCTGCCCTTGGCCGCAGGCGCCGCGCTaGAGGACGATGACCGGCGGCTGGCGAAGCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LGSSCPWPQAPR*RTMTGGWRSFS Trigger: CGAGAAGCTTCGCCAGCCGCCGGTCATCGTCCTGCAGCGCGGCGCCTGCGGCCAAGGGCAGGAAGATCCCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CCA 72 bp | TGGCGGCGCGCAGCTGGCACAGGTTGGTGTAGGTCTTaGCGTCGCTACCACACACCGGCTCGCTGCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WRRAAGTGWCRS*RRYHTPARCWH Trigger: GTGCCAGCAGCGAGCCGGTGTGTGGTAGCGACGCCAAGACCTACACCAACCTGTGCCAGCTGCGCGCCGCCA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 72 bp | TCCAATGGCAACTACAAATTCTCCAGGTCTCAGCTCTaGGGAGCGGCCGAGCAGCAGGACTGGCAGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SNGNYKFSRSQL*GAAEQQDWQLS Trigger: GGAAAGCTGCCAGTCCTGCTGCTCGGCCGCTCCTCAGAGCTGAGACCTGGAGAATTTGTAGTTGCCATTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | TGGCCACTGGCACCTCCCTCTTCGAGAAAGGAAGCTTaGGATATAGTTCAATGTGAACCACAGCCGGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: WPLAPPSSRKEA*DIVQCEPQPGR Trigger: TCGCCCCGGCTGTGGTTCACATTGAACTATATCGCAAGCTTCCTTTCTCGAAGAGGGAGGTGCCAGTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | GACTGTCCGTTGATGCTGATGATGACGTCATTTTCCTaGAGCCCTCCGGCTTCTGCCGGGGTGTCAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: DCPLMLMMTSFS*SPPASAGVSGM Trigger: CATTCCTGACACCCCGGCAGAAGCCGGAGGGCTCAAGGAAAATGACGTCATCATCAGCATCAACGGACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 72 bp | GAGCATTTGTCACAATCAGTCCATCCTCCGATACGATaGATCCTGACCCACTGGCCACTGGCACCTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EHLSQSVHPPIR*ILTHWPLAPPS Trigger: AGAGGGAGGTGCCAGTGGCCAGTGGGTCAGGATTCATCGTATCGGAGGATGGACTGATTGTGACAAATGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 90 bp | GTGACCACAGACTGTCCGTTGATGCTGATGATGACGTCATTTTCCTaGAGCCCTCCGGCTTCTGCCGGGGTGTCAGGAATGACTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: VTTDCPLMLMMTSFS*SPPASAGVSGMTSM Trigger: CATTGAAGTCATTCCTGACACCCCGGCAGAAGCCGGAGGGCTCAAGGAAAATGACGTCATCATCAGCATCAACGGACAGTCTGTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 72 bp | ATATATGCCCCAGAGAGCACATCCGGGAAGTCTCGGTaGCGGTCCTTCAGCTCTTTGGCTTTGCTAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: IYAPESTSGKSR*RSFSSLALLDV Trigger: CACATCTAGCAAAGCCAAAGAGCTGAAGGACCGTCACCGAGACTTCCCGGATGTGCTCTCTGGGGCATATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | AGCAGCAGGACTGGCAGCTTTCCCTGGTGGTCAATCTaGATAAGCGCAATGTCCGCCTTTTCATCCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRTGSFPWWSI*ISAMSAFSSTS Trigger: GGATGTGGATGAAAAGGCGGACATTGCGCTTATCAAGATTGACCACCAGGGAAAGCTGCCAGTCCTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 90 bp | TCTTCATTGCCCCTGCGGACAACCATGTTCAGGGTGTTCTCCTTTTaGATGACATCGCTGACGTCATTGGCAGTGACCACAGACTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSLPLRTTMFRVFSF*MTSLTSLAVTTDCP Trigger: CGGACAGTCTGTGGTCACTGCCAATGACGTCAGCGATGTCATCAAAAAGGAGAACACCCTGAACATGGTTGTCCGCAGGGGCAATGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 90 bp | TTGATGACATCGCTGACGTCATTGGCAGTGACCACAGACTGTCCGTaGATGCTGATGATGACGTCATTTTCCTTGAGCCCTCCGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LMTSLTSLAVTTDCP*MLMMTSFSLSPPAS Trigger: AGAAGCCGGAGGGCTCAAGGAAAATGACGTCATCATCAGCATCAACGGACAGTCTGTGGTCACTGCCAATGACGTCAGCGATGTCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | TCGCTGACGTCATTGGCAGTGACCACAGACTGTCCGTaGATGCTGATGATGACGTCATTTTCCTTGAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLTSLAVTTDCP*MLMMTSFSLSP Trigger: AGGGCTCAAGGAAAATGACGTCATCATCAGCATCAACGGACAGTCTGTGGTCACTGCCAATGACGTCAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 72 bp | AGCTCAACCTTGACCCGGTTTTTGTTGGTGACCACGTaGGCATTTGTCACAATCAGTCCATCCTCCGATACG | + |
|
Preference number: 6 (lower is better) Translates to: SSTLTRFLLVTT*AFVTISPSSDT Trigger: CGTATCGGAGGATGGACTGATTGTGACAAATGCTCACGTGGTCACCAACAAAAACCGGGTCAAGGTTGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS TCA 72 bp | GCGACATCATTCGGATCCCAATATACTTCTTCTTGGTaGCAGCTTTCCCTTTGGCCTGTCGATCGTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ATSFGSQYTSSW*QLSLWPVDRGT Trigger: AGTCCCACGATCGACAGGCCAAAGGGAAAGCTGTCACCAAGAAGAAGTATATTGGGATCCGAATGATGTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS GCA 72 bp | GATGATGACGTCATTTTCCTTGAGCCCTCCGGCTTCTaGCGGGGTGTCAGGAATGACTTCAATGATATATGC | + |
|
Preference number: 6 (lower is better) Translates to: DDDVIFLEPSGF*RGVRNDFNDIC Trigger: GCATATATCATTGAAGTCATTCCTGACACCCCGGCAGAAGCCGGAGGGCTCAAGGAAAATGACGTCATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | GTGAGCGACATCATTCGGATCCCAATATACTTCTTCTaGGTGACAGCTTTCCCTTTGGCCTGTCGATCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSDIIRIPIYFF*VTAFPLACRSW Trigger: CCACGATCGACAGGCCAAAGGGAAAGCTGTCACCAAGAAGAAGTATATTGGGATCCGAATGATGTCGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | AGGGTGTTCTCCTTTTTGATGACATCGCTGACGTCATaGGCAGTGACCACAGACTGTCCGTTGATGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RVFSFLMTSLTS*AVTTDCPLMLM Trigger: CATCAGCATCAACGGACAGTCTGTGGTCACTGCCAATGACGTCAGCGATGTCATCAAAAAGGAGAACACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 90 bp | ACCATGTTCAGGGTGTTCTCCTTTTTGATGACATCGCTGACGTCATaGGCAGTGACCACAGACTGTCCGTTGATGCTGATGATGACGTCA | + |
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Preference number: 6 (lower is better) Translates to: TMFRVFSFLMTSLTS*AVTTDCPLMLMMTS Trigger: TGACGTCATCATCAGCATCAACGGACAGTCTGTGGTCACTGCCAATGACGTCAGCGATGTCATCAAAAAGGAGAACACCCTGAACATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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| CDS CAA 72 bp | ATTTCTTCAGGAATCACGGTAATCACAATGTCTTCATaGCCCCTGCGGACAACCATGTTCAGGGTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ISSGITVITMSS*PLRTTMFRVFS Trigger: GGAGAACACCCTGAACATGGTTGTCCGCAGGGGCAATGAAGACATTGTGATTACCGTGATTCCTGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006367.8 |
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