Pregenerated sensors for HTR5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039106Ensembl transcript IDs: ENSMUST00000036227.7
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTaGTGTAAGTACTCAGCATACCAGGGTGGGCAGTCACTCTACTGC | + |
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Preference number: 1 (lower is better) Translates to: VGRLGPFRWQGWTKC*CKYSAYQGGQSLYC Trigger: GCAGTAGAGTGACTGCCCACCCTGGTATGCTGAGTACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR GCA 90 bp | GGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTaGTGCTGTAAGTACTCAGCATACCAGGGTGGGCAGTCACTCTAC | + |
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Preference number: 1 (lower is better) Translates to: GVGRLGPFRWQGWTK*CCKYSAYQGGQSLY Trigger: GTAGAGTGACTGCCCACCCTGGTATGCTGAGTACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | GATAAAAGTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATaGACTAAGTGCTGCTGTAAGTACTCAGCATACCAGGGTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: DKSGVGRLGPFRWQG*TKCCCKYSAYQGGQ Trigger: CTGCCCACCCTGGTATGCTGAGTACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCACTTTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | ATGGGCGAATGGTCCCATGTGGTGATAAAAGTGGTGTCGGTCGGTTaGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: MGEWSHVVIKVVSVG*DPSGGKDGLSAAVS Trigger: ACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCACTTTTATCACCACATGGGACCATTCGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | GACCCCATATTGGGACATACACTCCAGGACCACAGAGCAGAACTCTaGAATGAGGGCTGTTCTGGAAATTTTGCCCTTATGGGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: DPILGHTLQDHRAEL*NEGCSGNFALMGCC Trigger: GCAGCAGCCCATAAGGGCAAAATTTCCAGAACAGCCCTCATTTCAGAGTTCTGCTCTGTGGTCCTGGAGTGTATGTCCCAATATGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR GCA 90 bp | CAGGTGTGTGTGATCCCCACTAGCCTTGTTCTTTCTGTCTTTCTCTaGCTGCCCCAGTTGTCTCACTTCCTCCCTCCTGATGTTCTAATC | + |
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Preference number: 1 (lower is better) Translates to: QVCVIPTSLVLSVFL*LPQLSHFLPPDVLI Trigger: GATTAGAACATCAGGAGGGAGGAAGTGAGACAACTGGGGCAGGCAGAGAAAGACAGAAAGAACAAGGCTAGTGGGGATCACACACACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | CTGGGTGGCTGTAAAAGCAAACCAGTGTTTCTCGCTGCTGGGATCTaGAGTGTGGGTGCTTTTGCTGAGAACCACATGCTAAGAGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: LGGCKSKPVFLAAGI*SVGAFAENHMLRVV Trigger: GACAACTCTTAGCATGTGGTTCTCAGCAAAAGCACCCACACTTCAGATCCCAGCAGCGAGAAACACTGGTTTGCTTTTACAGCCACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | TTCTGTCTTTCTCTGCCTGCCCCAGTTGTCTCACTTCCTCCCTCCTaGTGTTCTAATCAAACTTCTCATGTCTCTGCTGGAGTGGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: FCLSLPAPVVSLPPS*CSNQTSHVSAGVEL Trigger: CAACTCCACTCCAGCAGAGACATGAGAAGTTTGATTAGAACATCAGGAGGGAGGAAGTGAGACAACTGGGGCAGGCAGAGAAAGACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | GGTTTTCTGTGGCCGTATAAACACTGTGTCTTCCCTAGCCTGTCTTaGCTCACCAGTCACACTGCCAACTTGATAGTGGCATCACTTGAC | + |
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Preference number: 1 (lower is better) Translates to: GFLWPYKHCVFPSLS*LTSHTANLIVASLD Trigger: GTCAAGTGATGCCACTATCAAGTTGGCAGTGTGACTGGTGAGTCAAGACAGGCTAGGGAAGACACAGTGTTTATACGGCCACAGAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | CTAGAGACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTaGGGAAAGATAGAATCCAGGTCACCTGCAAGAGCAGGATGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LETVLHVVMRCLMWC*GKIESRSPARAGCA Trigger: AGCACATCCTGCTCTTGCAGGTGACCTGGATTCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | CTTCAGTTTATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTaGCTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCTTTTGATAGT | + |
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Preference number: 1 (lower is better) Translates to: LQFMGEVSTDRVLKR*LALALLSLLGSFDS Trigger: ACTATCAAAAGAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | TTAATGAAACCTTGTTATGAGAACAGTCATGACAGTCTGGACGCATaGGTCCTTCGTTCTGTTCACTTTCCAGCCTGGCTCAGGCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LMKPCYENSHDSLDA*VLRSVHFPAWLRPV Trigger: GACTGGCCTGAGCCAGGCTGGAAAGTGAACAGAACGAAGGACTCATGCGTCCAGACTGTCATGACTGTTCTCATAACAAGGTTTCATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | AAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATaGCTGTGTGTAATAGCACTGACTCCTCCGTCAGAGGACCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: KEMDLRKEMYLGLEK*LCVIALTPPSEDLS Trigger: ACTCAGGTCCTCTGACGGAGGAGTCAGTGCTATTACACACAGCCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | ACCCCATCAGAAATTTTAGATAGACAGACATGGTACAGTTTACACTaGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTGGGCACTCAA | + |
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Preference number: 1 (lower is better) Translates to: TPSEILDRQTWYSLH*SPYAVSIPSLVGTQ Trigger: TTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAACTGTACCATGTCTGTCTATCTAAAATTTCTGATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | TTTGGGGACAGAATTTGTGATCAAATATTAGGAAGGACCCCATATTaGGACATACACTCCAGGACCACAGAGCAGAACTCTGAAATGAGG | + |
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Preference number: 1 (lower is better) Translates to: FGDRICDQILGRTPY*DIHSRTTEQNSEMR Trigger: CCTCATTTCAGAGTTCTGCTCTGTGGTCCTGGAGTGTATGTCCCAATATGGGGTCCTTCCTAATATTTGATCACAAATTCTGTCCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | CCTATCTGGTCAAGTTCATACACCAACAAAACCATCACTATAAAATaGCCAGCACTCCTGTTCACTTCATGTGTCTGGTTGTCAGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: PIWSSSYTNKTITIK*PALLFTSCVWLSGP Trigger: AGGACCTGACAACCAGACACATGAAGTGAACAGGAGTGCTGGCCATTTTATAGTGATGGTTTTGTTGGTGTATGAACTTGACCAGATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR TCA 90 bp | CTTTCATGCACAGACAGGAATCAACATGAAACATGTCCACAGTCATaGAGCTGGCTGTCGAACTCCTTTCATCAGTTCATATTCTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LSCTDRNQHETCPQS*SWLSNSFHQFIFWC Trigger: ACACCAGAATATGAACTGATGAAAGGAGTTCGACAGCCAGCTTCATGACTGTGGACATGTTTCATGTTGATTCCTGTCTGTGCATGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | ACAGTTTACACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTaGGCACTCAACAAACACATCCTCATTATAACACTGAAAAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: TVYTGVRMRCPFLLL*ALNKHILIITLKSQ Trigger: TTGACTTTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CCA 90 bp | GCTCACAAATATCTGTACAGTTCCAGGGGATTTGGTGCCCTCTTCTaGATTACACAAGTACTGCAAGTACATAATTCATGCACATGTAGA | + |
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Preference number: 1 (lower is better) Translates to: AHKYLYSSRGFGALF*ITQVLQVHNSCTCR Trigger: TCTACATGTGCATGAATTATGTACTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCCTGGAACTGTACAGATATTTGTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR GCA 90 bp | ACAAATGGTAAAGACAGGAATCACTGTGCATCACAAATGGGCTGGTaGTTTGATATGTTTGGGGACAGAATTTGTGATCAAATATTAGGA | + |
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Preference number: 1 (lower is better) Translates to: TNGKDRNHCASQMGW*FDMFGDRICDQILG Trigger: TCCTAATATTTGATCACAAATTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCCTGTCTTTACCATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR GCA 90 bp | ACAGTTCCAGGGGATTTGGTGCCCTCTTCTGGATTACACAAGTACTaGAAGTACATAATTCATGCACATGTAGACAATCATACAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: TVPGDLVPSSGLHKY*KYIIHAHVDNHTNK Trigger: TTTATTTGTATGATTGTCTACATGTGCATGAATTATGTACTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCCTGGAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTCTGTCTTTCTCTGCCTaGCCCAGTTGTCTCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: VVSVGWDPSGGKDGLSAALSFSA*PSCLTS Trigger: GGAAGTGAGACAACTGGGGCAGGCAGAGAAAGACAG...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | GGTCCGTGGCTGCTGGTACAGAGTGAGGAAGAGTGCCCAGACATAAACCACCAGGACAGCTGGGCAGCCTaGAAAGGTTCATGGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: GPWLLVQSEEECPDINHQDSWAA*KGSWDN Trigger: ATTGTCCCATGAACCTTTGCAGGCTGCCCAGCTGTC...CTGGTGGTTTATGTCTGGGCACTCTTCCTCACTCTGTACCAGCAGCCACGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTCTGAGCTACAAGCTATaGGAAGAAGGCACTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: VVSVGWDPSGGKDGLSAALSYKL*EEGTPM Trigger: CATGGGAGTGCCTTCTTCCCATAGCTTGTAGCTCAG...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTCATCATAGTGAGTCCTCCAGGCTGAGCATAGGCAGTAAAGGACAGACATGTGGGCCAGGTCCGTaGCTGCTGGTACAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: EAHHSESSRLSIGSKGQTCGPGP*LLVQSE Trigger: CTCACTCTGTACCAGCAGCCACGGACCTGGCCCACA...TGTCTGTCCTTTACTGCCTATGCTCAGCCTGGAGGACTCACTATGATGAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTTGGGTCTAGAGGCTCATGCCAACTCTCTGCAATaGCAGCATCGTCTGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LYCCYRGAPRLSLGLEAHANSLQ*QHRLGV Trigger: CACACCCAGACGATGCTGCCATTGCAGAGAGTTGGC...ATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CAA 90 bp | TATGGGCGAATGGTCCCATGTGGTGATAAAAGTGGTGTCGGTCGGTaGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: YGRMVPCGDKSGVGR*GPFRWQGWTKCCCK Trigger: CTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCACTTTTATCACCACATGGGACCATTCGCCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGGTTCTCAAAAGGTGACTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCCTGCTGGAGTGGAGTTaGAGGAGGAATGGGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: RQGSQKVTGSGSSFPPWLLLEWS*RRNGHF Trigger: AAAGTGCCCATTCCTCCTTCAACTCCACTCCAGCAG...GAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCATCATAGTGAGTCCTCCAGGCTGAGCATAGGCAGTAAAGGACAGACATTCCCTAGCCTGTCTTaGCTCACCAGTCACACTGCC | + |
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Preference number: 2 (lower is better) Translates to: EAHHSESSRLSIGSKGQTFPSLS*LTSHTA Trigger: GGCAGTGTGACTGGTGAGTCAAGACAGGCTAGGGAA...TGTCTGTCCTTTACTGCCTATGCTCAGCCTGGAGGACTCACTATGATGAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCATGCCTGTAGGCAGCTGCTCAGGCCAGAGATATCAGATCCCCTAGAGACGCACTTGACCCGTGTCTaGCTATCTGGTCAAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VHACRQLLRPEISDPLETHLTRV*LSGQVH Trigger: ATGAACTTGACCAGATAGGCAGACACGGGTCAAGTG...CGTCTCTAGGGGATCTGATATCTCTGGCCTGAGCAGCTGCCTACAGGCATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | TTTACACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTGGGCACTCAACAGGGCAGTCACTCTACTaGTGCTACAGAGGAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: FTLESVCGVHSFSCGHSTGQSLY*CYRGAP Trigger: GGGTGCTCCTCTGTAGCAGCAGTAGAGTGACTGCCC...TGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCATGCCTGTAGGCAGCTGCTCAGGCCAGAGATATCAGATCCCCTAGAGACGAACTTCTCATGTCTCTaGTGGAGTGGAGTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VHACRQLLRPEISDPLETNFSCL*WSGVEG Trigger: TCCTTCAACTCCACTCCAGCAGAGACATGAGAAGTT...CGTCTCTAGGGGATCTGATATCTCTGGCCTGAGCAGCTGCCTACAGGCATGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCATGCCTGTAGGCAGCTGCTCAGGCCAGAGATATCAGATCCCCTAGAGACGAGTTCTCCACTGCATTaGTTTCATGCACAGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VHACRQLLRPEISDPLETSSPLH*FHAQTG Trigger: TCCTGTCTGTGCATGAAAGCAATGCAGTGGAGAACT...CGTCTCTAGGGGATCTGATATCTCTGGCCTGAGCAGCTGCCTACAGGCATGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTTGGGTCTAGAGGCTCATGCCCAAGGTTTTCTGTaGCCGTATAAACACTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LYCCYRGAPRLSLGLEAHAQGFL*PYKHCV Trigger: GACACAGTGTTTATACGGCCACAGAAAACCTTGGGC...ATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR TCA 90 bp | GTGCATGCCTGTAGGCAGCTGCTCAGGCCAGAGATATCAGATCCCCTAGAGACGTGTTTTAAATTGAGGTaGTATGGGCGAATGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VHACRQLLRPEISDPLETCFKLR*YGRMVP Trigger: TGGGACCATTCGCCCATATCACCTCAATTTAAAACA...CGTCTCTAGGGGATCTGATATCTCTGGCCTGAGCAGCTGCCTACAGGCATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGGGTCCCAGTGATCCTGGGGACAGGAAATATGAGGAAGTAAGCGAGTCTTTTGCCCTTATGGGCTaGTGCTTTTCAAACAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PLGPSDPGDRKYEEVSESFALMG*CFSNSL Trigger: GAGACTGTTTGAAAAGCAGCAGCCCATAAGGGCAAA...AGACTCGCTTACTTCCTCATATTTCCTGTCCCCAGGATCACTGGGACCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | GATTCTTCAGCCAACGGCCCCTGGGTGGCTGTAAAAGCAAACCAGTGTTTCTCGTTCTCAAAAGGTGACTaGCTCTGGCTCTTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: DSSANGPWVAVKANQCFSFSKGD*LWLFFP Trigger: GGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAA...CGAGAAACACTGGTTTGCTTTTACAGCCACCCAGGGGCCGTTGGCTGAAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | TTTACACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTGGGCACTCAACAGCCCTTATGGGCTGCTaGTTTTCAAACAGTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: FTLESVCGVHSFSCGHSTALMGC*FSNSLS Trigger: GGAGAGACTGTTTGAAAAGCAGCAGCCCATAAGGGC...TGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTCATCATAGTGAGTCCTCCAGGCTGAGCATAGGCAGTAAAGGACAGACATTCTCAGAGTTCCCTTaGGATAGCCTTGGAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: EAHHSESSRLSIGSKGQTFSEFP*DSLGGK Trigger: CTTACCTCCAAGGCTATCCCAAGGGAACTCTGAGAA...TGTCTGTCCTTTACTGCCTATGCTCAGCCTGGAGGACTCACTATGATGAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCATGCCTGTAGGCAGCTGCTCAGGCCAGAGATATCAGATCCCCTAGAGACGTCTATCTTCAGTTTATaGGAGAAGTCAGCACAGACA | + |
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Preference number: 2 (lower is better) Translates to: VHACRQLLRPEISDPLETSIFSL*EKSAQT Trigger: TGTCTGTGCTGACTTCTCCCATAAACTGAAGATAGA...CGTCTCTAGGGGATCTGATATCTCTGGCCTGAGCAGCTGCCTACAGGCATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR CAA 90 bp | ACAGGGTTCTCAAAAGGTGACTGGCTCTGGCTCTTCTTTCCCTCCTaGGCTCTTTTGATAGTGTTCTCAGAGTTCCCTTGGGATAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TGFSKGDWLWLFFPS*ALLIVFSEFPWDSL Trigger: AAGGCTATCCCAAGGGAACTCTGAGAACACTATCAAAAGAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCATCATAGTGAGTCCTCCAGGCTGAGCATAGGCAGTAAAGGACAGACATCACTTCCTCCCTCCTaGTGTTCTAATCAAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: EAHHSESSRLSIGSKGQTSLPPS*CSNQTS Trigger: AGAAGTTTGATTAGAACATCAGGAGGGAGGAAGTGA...TGTCTGTCCTTTACTGCCTATGCTCAGCCTGGAGGACTCACTATGATGAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | GGAATCACTGTGCATCACAAATGGGCTGGTGCTTTGATATGTTTGGGGACAGAACAGAGTGAGGAAGAGTaGCCAGACATAAACCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GITVHHKWAGALICLGTEQSEEE*PDINHQ Trigger: CTGGTGGTTTATGTCTGGGCACTCTTCCTCACTCTG...TTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGGCTGCTGGTACAGAGTaGGGAAGAGTGCCCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWAAGTE*GRVPRH Trigger: ATGTCTGGGCACTCTTCCTCACTCTGTACCAGCAGC...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTCATCATAGTGAGTCCTCCAGGCTGAGCATAGGCAGTAAAGGACAGACATGGGGACAGAATTTGTaGTCAAATATTAGGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: EAHHSESSRLSIGSKGQTWGQNL*SNIRKD Trigger: GTCCTTCCTAATATTTGATCACAAATTCTGTCCCCA...TGTCTGTCCTTTACTGCCTATGCTCAGCCTGGAGGACTCACTATGATGAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTTGGGTCTAGAGGCTCATAAACAGTCTCTCCATTaGATTTGCTGTTGCTATATA | + |
|
Preference number: 2 (lower is better) Translates to: LYCCYRGAPRLSLGLEAHKQSLH*ICCCYI Trigger: TATATAGCAACAGCAAATGCAATGGAGAGACTGTTT...ATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGACCGTGTCTGCCTATCTaGTCAAGTTCATACACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: DGVTCGYALPNVVLRKDRPCLPI*SSSYTN Trigger: GTTGGTGTATGAACTTGACCAGATAGGCAGACACGG...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGTCAGCCAACGGCCCCTaGGTGGCTGTAAAAGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWSANGP*VAVKAN Trigger: GTTTGCTTTTACAGCCACCCAGGGGCCGTTGGCTGA...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGCTCAGCATACCAGGGTaGGCAGTCACTCTACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWLSIPG*AVTLLL Trigger: CAGCAGTAGAGTGACTGCCCACCCTGGTATGCTGAG...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR TCA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGATGTGCTCATAGCCACTaGGCTGTCATTTTAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: DGVTCGYALPNVVLRKDRCAHSH*AVILAS Trigger: TGAAGCTAAAATGACAGCTCAGTGGCTATGAGCACA...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGAGTTCGGGCTGGTTTTaGACTTACCATGTTAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWSSGWF*TYHVSP Trigger: TGGGCTAACATGGTAAGTTCAAAACCAGCCCGAACT...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGTGCCTAATGTGGTGCTaGGGAAAGATAGAATCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWCLMWC*GKIESR Trigger: CCTGGATTCTATCTTTCCTCAGCACCACATTAGGCA...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAATTCTCATGTCTCTGCTaGAGTGGAGTTGAAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PFLLLWALNKHILIITLKFSCLC*SGVEGG Trigger: TCCTCCTTCAACTCCACTCCAGCAGAGACATGAGAA...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGAGAAATTTTGCCCTTATaGGCTGCTGCTTTTCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: DGVTCGYALPNVVLRKDREILPL*AAAFQT Trigger: TGTTTGAAAAGCAGCAGCCCATAAGGGCAAAATTTC...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 90 bp | TCAACTACTTGGTGGCTCACAAATATCTGTACAGTTCCAGGGGATTaGGTGCCCTCTTCTGGATTACACAAGTACTGCAAGTACATAATT | + |
|
Preference number: 2 (lower is better) Translates to: STTWWLTNICTVPGD*VPSSGLHKYCKYII Trigger: AATTATGTACTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCCTGGAACTGTACAGATATTTGTGAGCCACCAAGTAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGACCAGAGCCTTCAGGTaGATACAACTTCCAACACAT | + |
|
Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWTRAFR*IQLPTH Trigger: ATGTGTTGGAAGTTGTATTCACCTGAAGGCTCTGGT...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAAACCATCACTATAAAATGGCCAGCACTCCTGTTCACTTCATGTGTCTGACTGTGCATCACAAATaGGCTGGTGCTTTGATATGT | + |
|
Preference number: 2 (lower is better) Translates to: QQNHHYKMASTPVHFMCLTVHHK*AGALIC Trigger: ACATATCAAAGCACCAGCCCATTTGTGATGCACAGT...CAGACACATGAAGTGAACAGGAGTGCTGGCCATTTTATAGTGATGGTTTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGCCATTCCTTCTCTTGTaGGCACTCAACAAACACATC | + |
|
Preference number: 2 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWPFLLL*ALNKHI Trigger: GATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAAACCATCACTATAAAATaGCCAGCACTCCTGTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: PFLLLWALNKHILIITLKTITIK*PALLFT Trigger: AGTGAACAGGAGTGCTGGCCATTTTATAGTGATGGT...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CCA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGACATCAGTTCATATTCTaGTGTAAAGATTGTCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: DGVTCGYALPNVVLRKDRHQFIF*CKDCLC Trigger: GCAAAGACAATCTTTACACCAGAATATGAACTGATG...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR TCA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAACTGTTTGTTTTAAATTaGGGTGATATGGGCGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: PFLLLWALNKHILIITLKLFVLN*GDMGEW Trigger: CCATTCGCCCATATCACCTCAATTTAAAACAAACAG...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR GCA 90 bp | CAACAAAACCATCACTATAAAATGGCCAGCACTCCTGTTCACTTCATGTGTCTGTCTCTCCATTGCATTTaGTGTTGCTATATATGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QQNHHYKMASTPVHFMCLSLHCI*CCYICC Trigger: ACAACATATATAGCAACAGCAAATGCAATGGAGAGA...CAGACACATGAAGTGAACAGGAGTGCTGGCCATTTTATAGTGATGGTTTTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTTCTGCTGGAGTGGAGTaGAAGGAGGAATGGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: VVSVGWDPSGGKDGLSAASAGVE*KEEWAL Trigger: AAGTGCCCATTCCTCCTTCAACTCCACTCCAGCAGA...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | ACTTTGTGGGCCAGGTCCGTGGCTGCTGGTACAGAGTaGGGAAGAGTGCCCAGACATAAACCACCAGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLWARSVAAGTE*GRVPRHKPPEP Trigger: AGGCTCTGGTGGTTTATGTCTGGGCACTCTTCCTCACTCTGTACCAGCAGCCACGGACCTGGCCCACAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | CGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTaGTGCTGTAAGTACTCAGCATACCAGGGTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLGPFRWQGWTK*CCKYSAYQGGQ Trigger: CTGCCCACCCTGGTATGCTGAGTACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | CCAACTCTCTGCAATGGCAGCATCGTCTGGGTGTGCTaGGAGCCCACTTCCTGGATGAGGATTCTTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PTLCNGSIVWVC*EPTSWMRILQP Trigger: TGGCTGAAGAATCCTCATCCAGGAAGTGGGCTCTCAGCACACCCAGACGATGCTGCCATTGCAGAGAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | TACTCAGCATACCAGGGTGGGCAGTCACTCTACTGCTaGTACAGAGGAGCACCCCGACTTTCCTTGGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: YSAYQGGQSLYC*YRGAPRLSLGL Trigger: TAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAGTGACTGCCCACCCTGGTATGCTGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | GGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATaGACTAAGTGCTGCTGTAAGTACTCAGCATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVGRLGPFRWQG*TKCCCKYSAYQ Trigger: CTGGTATGCTGAGTACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTCATCATAGTGAGTCCTCCAGGCTGAGCATAGGCAGTAAAGGACAGACAGTGACCCTGGTGCCCTaGGCAGATGGATCTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAHHSESSRLSIGSKGQTVTLVP*ADGSCP Trigger: AGGACAAGATCCATCTGCCAAGGGCACCAGGGTCAC...TGTCTGTCCTTTACTGCCTATGCTCAGCCTGGAGGACTCACTATGATGAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTAGTCACACTGCCAACTaGATAGTGGCATCACTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVSVGWDPSGGKDGLSAASHTAN*IVASLD Trigger: GTCAAGTGATGCCACTATCAAGTTGGCAGTGTGACT...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTCCCTCCTTGGCTCTTTaGATAGTGTTCTCAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVSVGWDPSGGKDGLSAAPSLAL*IVFSEF Trigger: GAACTCTGAGAACACTATCAAAAGAGCCAAGGAGGG...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | TTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTaGTGTAAGTACTCAGCATACCAGGGTGGGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGPFRWQGWTKC*CKYSAYQGGQS Trigger: TGACTGCCCACCCTGGTATGCTGAGTACTTACAGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | TGGTCCCATGTGGTGATAAAAGTGGTGTCGGTCGGTTaGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WSHVVIKVVSVG*DPSGGKDGLSA Trigger: AGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCACTTTTATCACCACATGGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGGGTCCCAGTGATCCTGGGGACAGGAAATATGAGGAAGTAAGCGAGTCTAGGTTGGCTCCAAATTaGAGCTCCTCCTGCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLGPSDPGDRKYEEVSESRLAPN*SSSCLS Trigger: ACTAAGGCAGGAGGAGCTCAAATTTGGAGCCAACCT...AGACTCGCTTACTTCCTCATATTTCCTGTCCCCAGGATCACTGGGACCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | ATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTaGCTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MGEVSTDRVLKR*LALALLSLLGS Trigger: AGAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | GTGATCCCCACTAGCCTTGTTCTTTCTGTCTTTCTCTaGCTGCCCCAGTTGTCTCACTTCCTCCCTCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VIPTSLVLSVFL*LPQLSHFLPPD Trigger: ATCAGGAGGGAGGAAGTGAGACAACTGGGGCAGGCAGAGAAAGACAGAAAGAACAAGGCTAGTGGGGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAGTTTATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTGACTGGCTCCCTTGGGATAGCCTaGGAGGTAAGAGTGTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSVYGRSQHRQGSQKVTGSLGIA*EVRVCP Trigger: TGGGCACACTCTTACCTCCAAGGCTATCCCAAGGGA...GCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | CTAATCAAACTTCTCATGTCTCTGCTGGAGTGGAGTTaGAGGAGGAATGGGCACTTTGTGGGCCAGGTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LIKLLMSLLEWS*RRNGHFVGQVR Trigger: ACGGACCTGGCCCACAAAGTGCCCATTCCTCCTTCAACTCCACTCCAGCAGAGACATGAGAAGTTTGATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | TGGCCGTATAAACACTGTGTCTTCCCTAGCCTGTCTTaGCTCACCAGTCACACTGCCAACTTGATAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WPYKHCVFPSLS*LTSHTANLIVA Trigger: TGCCACTATCAAGTTGGCAGTGTGACTGGTGAGTCAAGACAGGCTAGGGAAGACACAGTGTTTATACGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | CCTTGTTATGAGAACAGTCATGACAGTCTGGACGCATaGGTCCTTCGTTCTGTTCACTTTCCAGCCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PCYENSHDSLDA*VLRSVHFPAWL Trigger: GAGCCAGGCTGGAAAGTGAACAGAACGAAGGACTCATGCGTCCAGACTGTCATGACTGTTCTCATAACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | TCAGCACAGACAGGGTTCTCAAAAGGTGACTGGCTCTaGCTCTTCTTTCCCTCCTTGGCTCTTTTGATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SAQTGFSKGDWL*LFFPSLALLIV Trigger: CACTATCAAAAGAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGGGTCCCAGTGATCCTGGGGACAGGAAATATGAGGAAGTAAGCGAGTCTGTCTCTCCATTGCATTaGCTGTTGCTATATATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLGPSDPGDRKYEEVSESVSPLH*LLLYML Trigger: CAACATATATAGCAACAGCAAATGCAATGGAGAGAC...AGACTCGCTTACTTCCTCATATTTCCTGTCCCCAGGATCACTGGGACCCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | ACATACACTCCAGGACCACAGAGCAGAACTCTGAAATaGGGGCTGTTCTGGAAATTTTGCCCTTATGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TYTPGPQSRTLK*GLFWKFCPYGL Trigger: CAGCCCATAAGGGCAAAATTTCCAGAACAGCCCTCATTTCAGAGTTCTGCTCTGTGGTCCTGGAGTGTATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | TCCTTGGCTCTTTTGATAGTGTTCTCAGAGTTCCCTTaGGATAGCCTTGGAGGTAAGAGTGTGCCCAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLALLIVFSEFP*DSLGGKSVPKV Trigger: AACCTTGGGCACACTCTTACCTCCAAGGCTATCCCAAGGGAACTCTGAGAACACTATCAAAAGAGCCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | TGTAAAAGCAAACCAGTGTTTCTCGCTGCTGGGATCTaGAGTGTGGGTGCTTTTGCTGAGAACCACATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CKSKPVFLAAGI*SVGAFAENHML Trigger: TAGCATGTGGTTCTCAGCAAAAGCACCCACACTTCAGATCCCAGCAGCGAGAAACACTGGTTTGCTTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | GTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTaGGGAAAGATAGAATCCAGGTCACCTGCAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLHVVMRCLMWC*GKIESRSPARA Trigger: TGCTCTTGCAGGTGACCTGGATTCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | ACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTaGGCACTCAACAAACACATCCTCATTATAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: TGVRMRCPFLLL*ALNKHILIITL Trigger: CAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | GACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATaGCTGTGTGTAATAGCACTGACTCCTCCGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLRKEMYLGLEK*LCVIALTPPSE Trigger: CTCTGACGGAGGAGTCAGTGCTATTACACACAGCCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | CACTGCATTGCTTTCATGCACAGACAGGAATCAACATaGAACATGTCCACAGTCATGAAGCTGGCTGTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: HCIAFMHRQEST*NMSTVMKLAVE Trigger: TTCGACAGCCAGCTTCATGACTGTGGACATGTTTCATGTTGATTCCTGTCTGTGCATGAAAGCAATGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | GAGGGCTGTTCTGGAAATTTTGCCCTTATGGGCTGCTaGTTTTCAAACAGTCTCTCCATTGCATTTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EGCSGNFALMGC*FSNSLSIAFAV Trigger: AACAGCAAATGCAATGGAGAGACTGTTTGAAAAGCAGCAGCCCATAAGGGCAAAATTTCCAGAACAGCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | GGCTCACAAATATCTGTACAGTTCCAGGGGATTTGGTaGCCTCTTCTGGATTACACAAGTACTGCAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GSQISVQFQGIW*PLLDYTSTAST Trigger: TGTACTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCCTGGAACTGTACAGATATTTGTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | AACCCTGTAGGTCCTGATAGCTCTATCTTCAGTTTATaGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NPVGPDSSIFSL*EKSAQTGFSKG Trigger: ACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAGATAGAGCTATCAGGACCTACAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGACTGTTGCTATATATGTaGTTAGATAGTTCGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DGVTCGYALPNVVLRKDRLLLYM*LDSSGW Trigger: CCAGCCCGAACTATCTAACAACATATATAGCAACAG...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGACAAACAGTCTCTCCATaGCATTTGCTGTTGCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: DGVTCGYALPNVVLRKDRQTVSP*HLLLLY Trigger: ATATAGCAACAGCAAATGCAATGGAGAGACTGTTTG...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | CAGAGAGACAGACAGAGGGGGACTTTGTGTTTACAATaGACAAATGGTAAAGACAGGAATCACTGTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QRDRQRGTLCLQ*TNGKDRNHCAS Trigger: TGATGCACAGTGATTCCTGTCTTTACCATTTGTTCATTGTAAACACAAAGTCCCCCTCTGTCTGTCTCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | ACAGACAGGAATCAACATGAAACATGTCCACAGTCATaGAGCTGGCTGTCGAACTCCTTTCATCAGTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: TDRNQHETCPQS*SWLSNSFHQFI Trigger: TATGAACTGATGAAAGGAGTTCGACAGCCAGCTTCATGACTGTGGACATGTTTCATGTTGATTCCTGTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | GAAATCCCAAGTAAGTTCTCCACTGCATTGCTTTCATaGACAGACAGGAATCAACATGAAACATGTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: EIPSKFSTALLS*TDRNQHETCPQ Trigger: CTGTGGACATGTTTCATGTTGATTCCTGTCTGTGCATGAAAGCAATGCAGTGGAGAACTTACTTGGGATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | AGAATTTGTGATCAAATATTAGGAAGGACCCCATATTaGGACATACACTCCAGGACCACAGAGCAGAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RICDQILGRTPY*DIHSRTTEQNS Trigger: AGAGTTCTGCTCTGTGGTCCTGGAGTGTATGTCCCAATATGGGGTCCTTCCTAATATTTGATCACAAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | GGTAAAGACAGGAATCACTGTGCATCACAAATGGGCTaGTGCTTTGATATGTTTGGGGACAGAATTTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GKDRNHCASQMG*CFDMFGDRICD Trigger: ATCACAAATTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCCTGTCTTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | GAAATTTTAGATAGACAGACATGGTACAGTTTACACTaGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: EILDRQTWYSLH*SPYAVSIPSLV Trigger: CACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAACTGTACCATGTCTGTCTATCTAAAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | TATCTGTACAGTTCCAGGGGATTTGGTGCCCTCTTCTaGATTACACAAGTACTGCAAGTACATAATTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: YLYSSRGFGALF*ITQVLQVHNSC Trigger: GCATGAATTATGTACTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCCTGGAACTGTACAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGAAATGGGCTGGTGCTTaGATATGTTTGGGGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWKWAGA*ICLGTE Trigger: TTCTGTCCCCAAACATATCAAAGCACCAGCCCATTT...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAACTCTTCTTTCCCTCCTaGGCTCTTTTGATAGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PFLLLWALNKHILIITLKLFFPS*ALLIVF Trigger: GAACACTATCAAAAGAGCCAAGGAGGGAAAGAAGAG...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | AAAGACAGGAATCACTGTGCATCACAAATGGGCTGGTaGTTTGATATGTTTGGGGACAGAATTTGTGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: KDRNHCASQMGW*FDMFGDRICDQ Trigger: TTGATCACAAATTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCCTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | GGGGATTTGGTGCCCTCTTCTGGATTACACAAGTACTaGAAGTACATAATTCATGCACATGTAGACAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: GDLVPSSGLHKY*KYIIHAHVDNH Trigger: ATGATTGTCTACATGTGCATGAATTATGTACTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | CAAATGGTAAAGACAGGAATCACTGTGCATCACAAATaGGCTGGTGCTTTGATATGTTTGGGGACAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: QMVKTGITVHHK*AGALICLGTEF Trigger: AAATTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCCTGTCTTTACCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | TCAAGTTCATACACCAACAAAACCATCACTATAAAATaGCCAGCACTCCTGTTCACTTCATGTGTCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSYTNKTITIK*PALLFTSCVWL Trigger: CAACCAGACACATGAAGTGAACAGGAGTGCTGGCCATTTTATAGTGATGGTTTTGTTGGTGTATGAACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR TCA 72 bp | CATCAGGTGTTCCATGCTCTAGGTTTGCAGGGTATATaGTTTAAATGTTGGCCAGGAGATGCTAAATACATA | + |
|
Preference number: 3 (lower is better) Translates to: HQVFHALGLQGI*FKCWPGDAKYI Trigger: TATGTATTTAGCATCTCCTGGCCAACATTTAAATCATATACCCTGCAAACCTAGAGCATGGAACACCTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR GCA 72 bp | AATCTAAGGAAATCCCAAGTAAGTTCTCCACTGCATTaGTTTCATGCACAGACAGGAATCAACATGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: NLRKSQVSSPLH*FHAQTGINMKH Trigger: ATGTTTCATGTTGATTCCTGTCTGTGCATGAAAGCAATGCAGTGGAGAACTTACTTGGGATTTCCTTAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CCA 72 bp | AGCTGGCTGTCGAACTCCTTTCATCAGTTCATATTCTaGTGTAAAGATTGTCTTTGCAGGAAATTCAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: SWLSNSFHQFIF*CKDCLCRKFKI Trigger: TATCTTGAATTTCCTGCAAAGACAATCTTTACACCAGAATATGAACTGATGAAAGGAGTTCGACAGCCAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGTTTATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTGACTGGCAGACGCCGGCCCAGCTaGCAGCGGCGCCCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVYGRSQHRQGSQKVTGRRRPS*QRRPDS Trigger: GCTGTCTGGGCGCCGCTGGCAGCTGGGCCGGCGTCT...GCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR GCA 90 bp | GGTCCGTGGCTGCTGGTACAGAGTGAGGAAGAGTGCCCAGACATAAACCACCAGGCCCACCATGAGGGCTaGCCTTTGCTCCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPWLLVQSEEECPDINHQAHHEG*PLLLLL Trigger: GAGCAGAAGGAGCAAAGGGCAGCCCTCATGGTGGGC...CTGGTGGTTTATGTCTGGGCACTCTTCCTCACTCTGTACCAGCAGCCACGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTTGGGTCTAGAGGCTCATCGGGGGAGACGCTGTTaGTCTTCCTGGAGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LYCCYRGAPRLSLGLEAHRGRRC*SSWSPC Trigger: GCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCG...ATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR TCA 90 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTTGGGTCTAGAGGCTCATACTCCAGGTGGCGCGTaGTTGACCAGTAGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYCCYRGAPRLSLGLEAHTPGGA*LTSSGP Trigger: TGGACCGCTACTGGTCAATCACGCGCCACCTGGAGT...ATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTAGCTACCAGGTTGTGTaGTACTCGGTGGAAGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VVSVGWDPSGGKDGLSAASYQVV*YSVEGA Trigger: CGCACCTTCCACCGAGTACCACACAACCTGGTAGCT...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR TCA 90 bp | GGTCCGTGGCTGCTGGTACAGAGTGAGGAAGAGTGCCCAGACATAAACCACCAGTGGAGAGTGCCCAGGTaGGCAGGATCATCACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPWLLVQSEEECPDINHQWRVPR*AGSSHW Trigger: CCAATGTGATGATCCTGCTCACCTGGGCACTCTCCA...CTGGTGGTTTATGTCTGGGCACTCTTCCTCACTCTGTACCAGCAGCCACGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR TCA 90 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTTGGGTCTAGAGGCTCATTGGCATGGCGGACCGTaGACACCATCTGGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYCCYRGAPRLSLGLEAHWHGGP*TPSGDV Trigger: AACATCCCCAGATGGTGTTCACGGTCCGCCATGCCA...ATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTCATCCGAGATGGCCATaGAAGCTACCAGGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVSVGWDPSGGKDGLSAAHPRWP*KLPGCV Trigger: CACACAACCTGGTAGCTTCCATGGCCATCTCGGATG...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | GTGGTGTCGGTCGGTTGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGCTGCTTCACATTCCAGATGCTaGCAGTACAGCAGAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VVSVGWDPSGGKDGLSAASHSRC*QYSRAR Trigger: ACGTGCTCTGCTGTACTGCCAGCATCTGGAATGTGA...AGCAGCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGTTCTCAAAAGGTGACTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCGGCTCGCGACTGACTTaGCATTCCTCACTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSQKVTGSGSSFPPWLGSRLT*HSSLGS Trigger: TGAGCCCAGTGAGGAATGCCAAGTCAGTCGCGAGCC...GAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | CTCTACTGCTGCTACAGAGGAGCACCCCGACTTTCCTaGGGTCTAGAGGCTCATCATAGTGAGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYCCYRGAPRLS*GLEAHHSESSR Trigger: CCTGGAGGACTCACTATGATGAGCCTCTAGACCCAAGGAAAGTCGGGGTGCTCCTCTGTAGCAGCAGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | ATGGTCCCATGTGGTGATAAAAGTGGTGTCGGTCGGTaGGGACCCTTCAGGTGGCAAGGATGGACTAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MVPCGDKSGVGR*GPFRWQGWTKC Trigger: GCACTTAGTCCATCCTTGCCACCTGAAGGGTCCCAACCGACCGACACCACTTTTATCACCACATGGGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGTTCTCAAAAGGTGACTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCTTGTGTGGTACTCGGTaGAAGGTGCGTACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGSQKVTGSGSSFPPWLLCGTR*KVRTLR Trigger: CCTCAAGGTACGCACCTTCCACCGAGTACCACACAA...GAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | TTTACACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTGGGCACTCAACACGCTGTTGGTCTTCCTaGAGCCCATGCGGAATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLESVCGVHSFSCGHSTRCWSS*SPCGIS Trigger: CGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCG...TGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | TCATGTCTCTGCTGGAGTGGAGTTGAAGGAGGAATGGGCACTTTGTGGGCCAGGACCGTGAACACCATCTaGGGATGTTGTGTAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLCWSGVEGGMGTLWARTVNTI*GCCVAF Trigger: GAATGCTACACAACATCCCCAGATGGTGTTCACGGT...CCTGGCCCACAAAGTGCCCATTCCTCCTTCAACTCCACTCCAGCAGAGACATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR TCA 90 bp | GGAATCACTGTGCATCACAAATGGGCTGGTGCTTTGATATGTTTGGGGACAGAAAGGAAGGCTCGCGACTaGCTTGGCATTCCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GITVHHKWAGALICLGTERKARD*LGIPHW Trigger: CCAGTGAGGAATGCCAAGTCAGTCGCGAGCCTTCCT...TTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR GCA 90 bp | TTTACACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTTGTGGGCACTCAACAGATGACAGTGGAGAGTaGCCAGGTGAGCAGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTLESVCGVHSFSCGHSTDDSGE*PGEQDH Trigger: ATGATCCTGCTCACCTGGGCACTCTCCACTGTCATC...TGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTTTATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTGACTGGCGTATCCCCTTCTGTCTaGAAGGTGACGGTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVYGRSQHRQGSQKVTGVSPSV*KVTVAW Trigger: CCATGCCACCGTCACCTTCCAGACAGAAGGGGATAC...GCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | TCTAATCAAACTTCTCATGTCTCTGCTGGAGTGGAGTaGAAGGAGGAATGGGCACTTTGTGGGCCAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SNQTSHVSAGVE*KEEWALCGPGP Trigger: CGGACCTGGCCCACAAAGTGCCCATTCCTCCTTCAACTCCACTCCAGCAGAGACATGAGAAGTTTGATTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR TCA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAACAGGTGGCGCGTGATTaGCCAGTAGCGGTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFLLLWALNKHILIITLKQVARD*PVAVQS Trigger: GCTCTGGACCGCTACTGGTCAATCACGCGCCACCTG...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAAGGAAATGGACCTTAGAAAAGAAATGTATCTGGGCCTGGAGAAATGGCTTCTGTCTGGAAGGTaGCGGTGGCATGGCGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: SSKEMDLRKEMYLGLEKWLLSGR*RWHGGP Trigger: CGGTCCGCCATGCCACCGTCACCTTCCAGACAGAAG...CCATTTCTCCAGGCCCAGATACATTTCTTTTCTAAGGTCCATTTCCTTTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | GACTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCTTTaGATAGTGTTCTCAGAGTTCCCTTGGGATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DWLWLFFPSLAL*IVFSEFPWDSL Trigger: AAGGCTATCCCAAGGGAACTCTGAGAACACTATCAAAAGAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGTTTATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTGACTGGCGCGGTCCAGAGCTATTaGTGTCACATTCCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVYGRSQHRQGSQKVTGAVQSY*CHIPDA Trigger: AGCATCTGGAATGTGACAGCAATAGCTCTGGACCGC...GCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | TCAAAAGGTGACTGGCTCTGGCTCTTCTTTCCCTCCTaGGCTCTTTTGATAGTGTTCTCAGAGTTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGDWLWLFFPS*ALLIVFSEFPW Trigger: CCAAGGGAACTCTGAGAACACTATCAAAAGAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTTTATGGGAGAAGTCAGCACAGACAGGGTTCTCAAAAGGTGACTGGCCTTGGCATTCCTCACTaGGCTCAGAATAAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVYGRSQHRQGSQKVTGLGIPH*AQNKSL Trigger: GAGAGACTTATTCTGAGCCCAGTGAGGAATGCCAAG...GCCAGTCACCTTTTGAGAACCCTGTCTGTGCTGACTTCTCCCATAAACTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | AGATCCCCTAGAGACGGTGTTACATGTGGTTATGCGTaGCCTAATGTGGTGCTGAGGAAAGATAGAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPRDGVTCGYA*PNVVLRKDRIQ Trigger: CTGGATTCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTCTCTAGGGGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | TGGTGGCTCACAAATATCTGTACAGTTCCAGGGGATTaGGTGCCCTCTTCTGGATTACACAAGTACTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WWLTNICTVPGD*VPSSGLHKYCK Trigger: CTTGCAGTACTTGTGTAATCCAGAAGAGGGCACCAAATCCCCTGGAACTGTACAGATATTTGTGAGCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS-3UTR GCA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAACCAACCACAGGAAGATaGTCTTCCAGATGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLLWALNKHILIITLKPTTGR*SSRWQG Trigger: TCCCTGCCATCTGGAAGAGCATCTTCCTGTGGTTGG...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | GAGCAGAACTCTGAAATGAGGGCTGTTCTGGAAATTTaGCCCTTATGGGCTGCTGCTTTTCAAACAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQNSEMRAVLEI*PLWAAAFQTVS Trigger: AGAGACTGTTTGAAAAGCAGCAGCCCATAAGGGCAAAATTTCCAGAACAGCCCTCATTTCAGAGTTCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | TACACTGGAGTCCGTATGCGGTGTCCATTCCTTCTCTaGTGGGCACTCAACAAACACATCCTCATTATAACA | + |
|
Preference number: 4 (lower is better) Translates to: YTGVRMRCPFLL*WALNKHILIIT Trigger: TGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGGACACCGCATACGGACTCCAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| 3UTR CAA 72 bp | AAATCTAAGGAAATCCCAAGTAAGTTCTCCACTGCATaGCTTTCATGCACAGACAGGAATCAACATGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KSKEIPSKFSTA*LSCTDRNQHET Trigger: TGTTTCATGTTGATTCCTGTCTGTGCATGAAAGCAATGCAGTGGAGAACTTACTTGGGATTTCCTTAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
||
| CDS CCA 90 bp | CAGATGCTGGCAGTACAGCAGAGCACGTCACATGCGATCCACAGCTaGCATAGACGCCGGCCCAGCTGCCAGCGGCGCCCAGACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QMLAVQQSTSHAIHS*HRRRPSCQRRPDSS Trigger: TGAGCTGTCTGGGCGCCGCTGGCAGCTGGGCCGGCGTCTATGCCAGCTGTGGATCGCATGTGACGTGCTCTGCTGTACTGCCAGCATCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 90 bp | AGCACGTCACATGCGATCCACAGCTGGCATAGACGCCGGCCCAGCTaGCAGCGGCGCCCAGACAGCTCATGTACCAGGCTCAGTGGCATA | + |
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Preference number: 5 (lower is better) Translates to: STSHAIHSWHRRRPS*QRRPDSSCTRLSGI Trigger: TATGCCACTGAGCCTGGTACATGAGCTGTCTGGGCGCCGCTGGCAGCTGGGCCGGCGTCTATGCCAGCTGTGGATCGCATGTGACGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 90 bp | GCTGCCCTTTGCTCCTTCTGCTCCCTCCACGTATCCCCTTCTGTCTaGAAGGTGACGGTGGCATGGCGGACCGTGAACACCATCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: AALCSFCSLHVSPSV*KVTVAWRTVNTIWG Trigger: TCCCCAGATGGTGTTCACGGTCCGCCATGCCACCGTCACCTTCCAGACAGAAGGGGATACGTGGAGGGAGCAGAAGGAGCAAAGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 90 bp | ACTCCGATGAGGATGCCCACCATGAGGGCTGCCCTTTGCTCCTTCTaGTCCCTCCACGTATCCCCTTCTGTCTGGAAGGTGACGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: TPMRMPTMRAALCSF*SLHVSPSVWKVTVA Trigger: TGCCACCGTCACCTTCCAGACAGAAGGGGATACGTGGAGGGAGCAGAAGGAGCAAAGGGCAGCCCTCATGGTGGGCATCCTCATCGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS TCA 90 bp | TGGAGACACGCTTGCGGGTACGGAGTGTGTACTCCAGGTGGCGCGTaGTTGACCAGTAGCGGTCCAGAGCTATTGCTGTCACATTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: WRHACGYGVCTPGGA*LTSSGPELLLSHSR Trigger: TCTGGAATGTGACAGCAATAGCTCTGGACCGCTACTGGTCAATCACGCGCCACCTGGAGTACACACTCCGTACCCGCAAGCGTGTCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 90 bp | TCACCTCCACAGCTTCGGGTACGGGGGAGACGCTGTTGGTCTTCCTaGAGCCCATGCGGAATTTCGCCGCCCTGTAAATTTTCCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SPPQLRVRGRRCWSS*SPCGISPPCKFSST Trigger: TGTACTGGAAAATTTACAGGGCGGCGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGTACCCGAAGCTGTGGAGGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 90 bp | TGCTCCCTCCACGTATCCCCTTCTGTCTGGAAGGTGACGGTGGCATaGCGGACCGTGAACACCATCTGGGGATGTTGTGTAGCATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CSLHVSPSVWKVTVA*RTVNTIWGCCVAFF Trigger: GAAGAATGCTACACAACATCCCCAGATGGTGTTCACGGTCCGCCATGCCACCGTCACCTTCCAGACAGAAGGGGATACGTGGAGGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 90 bp | CAGCTTCGGGTACGGGGGAGACGCTGTTGGTCTTCCTGGAGCCCATaGGGAATTTCGCCGCCCTGTAAATTTTCCAGTACACAAAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: QLRVRGRRCWSSWSP*GISPPCKFSSTQRA Trigger: TGCTCTTTGTGTACTGGAAAATTTACAGGGCGGCGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGTACCCGAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS-3UTR CAA 90 bp | CCCCTGGGTCCCAGTGATCCTGGGGACAGGAAATATGAGGAAGTAAGCGAGTCTAGCGGTCCAGAGCTATaGCTGTCACATTCCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: PLGPSDPGDRKYEEVSESSGPEL*LSHSRC Trigger: GCATCTGGAATGTGACAGCAATAGCTCTGGACCGCT...AGACTCGCTTACTTCCTCATATTTCCTGTCCCCAGGATCACTGGGACCCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS-3UTR CAA 90 bp | AGACAGGGTTCTCAAAAGGTGACTGGCTCTGGCTCTTCTTTCCCTCCTTGGCTCATGGAAGCTACCAGGTaGTGTGGTACTCGGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RQGSQKVTGSGSSFPPWLMEATR*CGTRWK Trigger: CTTCCACCGAGTACCACACAACCTGGTAGCTTCCAT...GAGCCAAGGAGGGAAAGAAGAGCCAGAGCCAGTCACCTTTTGAGAACCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS-3UTR CAA 90 bp | GACGGTGTTACATGTGGTTATGCGTTGCCTAATGTGGTGCTGAGGAAAGATAGAACGGGGGAGACGCTGTaGGTCTTCCTGGAGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: DGVTCGYALPNVVLRKDRTGETL*VFLEPM Trigger: CATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGT...TCTATCTTTCCTCAGCACCACATTAGGCAACGCATAACCACATGTAACACCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS-3UTR CAA 90 bp | GGAATCACTGTGCATCACAAATGGGCTGGTGCTTTGATATGTTTGGGGACAGAAAGCAGGATCATCACATaGGAGACACGCTTGCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: GITVHHKWAGALICLGTESRIIT*ETRLRV Trigger: TACCCGCAAGCGTGTCTCCAATGTGATGATCCTGCT...TTCTGTCCCCAAACATATCAAAGCACCAGCCCATTTGTGATGCACAGTGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS-3UTR CAA 90 bp | CCATTCCTTCTCTTGTGGGCACTCAACAAACACATCCTCATTATAACACTGAAATGGAAGGTGCGTACCTaGAGGATGGTAGCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: PFLLLWALNKHILIITLKWKVRT*RMVAST Trigger: GGTGCTGGCTACCATCCTCAAGGTACGCACCTTCCA...TTTCAGTGTTATAATGAGGATGTGTTTGTTGAGTGCCCACAAGAGAAGGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 90 bp | CTTGGAGAAGAAGACCTTGAAAGCACTGCTGTAGCTCCTGTTGAATaGTGTGTAGATGAGTGGGTTGAAGAAGGAATTAGAATAGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LGEEDLESTAVAPVE*CVDEWVEEGIRIAQ Trigger: TTGGGCTATTCTAATTCCTTCTTCAACCCACTCATCTACACAGCATTCAACAGGAGCTACAGCAGTGCTTTCAAGGTCTTCTTCTCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 72 bp | CATGCGATCCACAGCTGGCATAGACGCCGGCCCAGCTaGCAGCGGCGCCCAGACAGCTCATGTACCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HAIHSWHRRRPS*QRRPDSSCTRL Trigger: GAGCCTGGTACATGAGCTGTCTGGGCGCCGCTGGCAGCTGGGCCGGCGTCTATGCCAGCTGTGGATCGCATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | GCAGTACAGCAGAGCACGTCACATGCGATCCACAGCTaGCATAGACGCCGGCCCAGCTGCCAGCGGCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: AVQQSTSHAIHS*HRRRPSCQRRP Trigger: TGGGCGCCGCTGGCAGCTGGGCCGGCGTCTATGCCAGCTGTGGATCGCATGTGACGTGCTCTGCTGTACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | TCACCTCCACAGCTTCGGGTACGGGGGAGACGCTGTTaGTCTTCCTGGAGCCCATGCGGAATTTCGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SPPQLRVRGRRC*SSWSPCGISPP Trigger: GGGCGGCGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGTACCCGAAGCTGTGGAGGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | TGCTCCTTCTGCTCCCTCCACGTATCCCCTTCTGTCTaGAAGGTGACGGTGGCATGGCGGACCGTGAACACC | + |
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Preference number: 6 (lower is better) Translates to: CSFCSLHVSPSV*KVTVAWRTVNT Trigger: GGTGTTCACGGTCCGCCATGCCACCGTCACCTTCCAGACAGAAGGGGATACGTGGAGGGAGCAGAAGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CAA 72 bp | GCCCAGGTGAGCAGGATCATCACATTGGAGACACGCTaGCGGGTACGGAGTGTGTACTCCAGGTGGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: AQVSRIITLETR*RVRSVYSRWRV Trigger: CACGCGCCACCTGGAGTACACACTCCGTACCCGCAAGCGTGTCTCCAATGTGATGATCCTGCTCACCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 72 bp | AGGATGCCCACCATGAGGGCTGCCCTTTGCTCCTTCTaGTCCCTCCACGTATCCCCTTCTGTCTGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RMPTMRAALCSF*SLHVSPSVWKV Trigger: CACCTTCCAGACAGAAGGGGATACGTGGAGGGAGCAGAAGGAGCAAAGGGCAGCCCTCATGGTGGGCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CAA 90 bp | GTGGAGAGTGCCCAGGTGAGCAGGATCATCACATTGGAGACACGCTaGCGGGTACGGAGTGTGTACTCCAGGTGGCGCGTGATTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: VESAQVSRIITLETR*RVRSVYSRWRVIDQ Trigger: CTGGTCAATCACGCGCCACCTGGAGTACACACTCCGTACCCGCAAGCGTGTCTCCAATGTGATGATCCTGCTCACCTGGGCACTCTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CAA 90 bp | GGCACCCACGGTGGAGAACACGGTGTAGGAAGGCTCGCGACTGACTaGGCATTCCTCACTGGGCTCAGAATAAGTCTCTCCCCAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GTHGGEHGVGRLATD*AFLTGLRISLSPAK Trigger: TTTGGCTGGGGAGAGACTTATTCTGAGCCCAGTGAGGAATGCCAAGTCAGTCGCGAGCCTTCCTACACCGTGTTCTCCACCGTGGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS TCA 72 bp | GCTTGCGGGTACGGAGTGTGTACTCCAGGTGGCGCGTaGTTGACCAGTAGCGGTCCAGAGCTATTGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ACGYGVCTPGGA*LTSSGPELLLS Trigger: TGACAGCAATAGCTCTGGACCGCTACTGGTCAATCACGCGCCACCTGGAGTACACACTCCGTACCCGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | CAGCTTCGGGTACGGGGGAGACGCTGTTGGTCTTCCTaGAGCCCATGCGGAATTTCGCCGCCCTGTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: QLRVRGRRCWSS*SPCGISPPCKF Trigger: AAATTTACAGGGCGGCGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGTACCCGAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | ATGGCCATGGAAGCTACCAGGTTGTGTGGTACTCGGTaGAAGGTGCGTACCTTGAGGATGGTAGCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: MAMEATRLCGTR*KVRTLRMVAST Trigger: GGTGCTGGCTACCATCCTCAAGGTACGCACCTTCCACCGAGTACCACACAACCTGGTAGCTTCCATGGCCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | CACGTATCCCCTTCTGTCTGGAAGGTGACGGTGGCATaGCGGACCGTGAACACCATCTGGGGATGTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: HVSPSVWKVTVA*RTVNTIWGCCV Trigger: TACACAACATCCCCAGATGGTGTTCACGGTCCGCCATGCCACCGTCACCTTCCAGACAGAAGGGGATACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CAA 72 bp | ACAGTGGAGAGTGCCCAGGTGAGCAGGATCATCACATaGGAGACACGCTTGCGGGTACGGAGTGTGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: TVESAQVSRIIT*ETRLRVRSVYS Trigger: GGAGTACACACTCCGTACCCGCAAGCGTGTCTCCAATGTGATGATCCTGCTCACCTGGGCACTCTCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS GCA 72 bp | GTACGGGGGAGACGCTGTTGGTCTTCCTGGAGCCCATaGGGAATTTCGCCGCCCTGTAAATTTTCCAGTACA | + |
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Preference number: 6 (lower is better) Translates to: VRGRRCWSSWSP*GISPPCKFSST Trigger: TGTACTGGAAAATTTACAGGGCGGCGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | CACATCCGAGATGGCCATGGAAGCTACCAGGTTGTGTaGTACTCGGTGGAAGGTGCGTACCTTGAGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: HIRDGHGSYQVV*YSVEGAYLEDG Trigger: ACCATCCTCAAGGTACGCACCTTCCACCGAGTACCACACAACCTGGTAGCTTCCATGGCCATCTCGGATGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CAA 72 bp | GGTGGAGAACACGGTGTAGGAAGGCTCGCGACTGACTaGGCATTCCTCACTGGGCTCAGAATAAGTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GGEHGVGRLATD*AFLTGLRISLS Trigger: GGAGAGACTTATTCTGAGCCCAGTGAGGAATGCCAAGTCAGTCGCGAGCCTTCCTACACCGTGTTCTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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| CDS CCA 72 bp | ACTGCTGTAGCTCCTGTTGAATGCTGTGTAGATGAGTaGGTTGAAGAAGGAATTAGAATAGCCCAACCACAG | + |
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Preference number: 6 (lower is better) Translates to: TAVAPVECCVDE*VEEGIRIAQPQ Trigger: CTGTGGTTGGGCTATTCTAATTCCTTCTTCAACCCACTCATCTACACAGCATTCAACAGGAGCTACAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036227.7 |
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