Pregenerated sensors for HTR3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032269Ensembl transcript IDs: ENSMUST00000003826.8, ENSMUST00000217289.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTaGGGTTGCTCAGATGAATTGGTGTTGGAAACAGGATGCAGGACC | + |
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Preference number: 1 (lower is better) Translates to: ETDWVFSTKFRGQRD*GCSDELVLETGCRT Trigger: GGTCCTGCATCCTGTTTCCAACACCAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCTGGGGTTGCTCAGATaGATTGGTGTTGGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: MSSSRGRNHRSTGKETRALGLLR*IGVGNR Trigger: CCTGTTTCCAACACCAATTCATCTGAGCAACCCCAG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTGTCAGAGAGACAGACTaGGTCTTCAGCACTAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: MSSSRGRNHRSTGKETRAVRETD*VFSTKF Trigger: AAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGAC...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACTGGGGTTGCTCAGATaGATTGGTGTTGGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: NVEMSSSRGRNHRSTGKELGLLR*IGVGNR Trigger: CCTGTTTCCAACACCAATTCATCTGAGCAACCCCAG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACAAAGAGACTGGGGTTaGTCAGATGAATTGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: NVEMSSSRGRNHRSTGKEQRDWG*SDELVL Trigger: CAACACCAATTCATCTGAGCAACCCCAGTCTCTTTG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGAGTCAGAGAGACAGACTaGGTCTTCAGCACTAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: KCRSLRHLCKTICFSLIRVRETD*VFSTKF Trigger: AAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGAC...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTCAGATGAATTGGTGTaGGAAACAGGATGCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: RETDWVFSTKFRGQRDWGSDELV*ETGCRT Trigger: GGTCCTGCATCCTGTTTCCAACACCAATTCATCTGA...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| 3UTR CCA 72 bp | TGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTaGGGTTGCTCAGATGAATTGGTGTTGGAAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: WVFSTKFRGQRD*GCSDELVLETG Trigger: TCCTGTTTCCAACACCAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | CTGATGAAGCTGAGTGTTAGGGAAGTACCCACAGGTGAGCTGAAGAGGGAGCCATATCTCGGGCCTGGGTaGCCCTCCTCCGGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LMKLSVREVPTGELKREPYLGPG*PSSGCL Trigger: AAGGCAGCCGGAGGAGGGCCACCCAGGCCCGAGATA...TGGCTCCCTCTTCAGCTCACCTGTGGGTACTTCCCTAACACTCAGCTTCATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGGCCCTCCTCCGGCTaGCTTCTCCCGGGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RETDWVFSTKFRGQRDWGWPSSG*LLPGLS Trigger: TGACAGCCCCGGGAGAAGGCAGCCGGAGGAGGGCCA...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTTGGCCCTCCTCCGGCTaGCTTCTCCCGGGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RQTGSSALSLGDKETGVAWPSSG*LLPGLS Trigger: TGACAGCCCCGGGAGAAGGCAGCCGGAGGAGGGCCA...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCCGCAGCCAGTCCCTTaGCACCTCCCGCATCTCATC | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRAPQPVP*HLPHLI Trigger: GATGAGATGCGGGAGGTGGCAAGGGACTGGCTGCGG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTATCTCGGGCCTGGGTaGCCCTCCTCCGGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RETDWVFSTKFRGQRDWGYLGPG*PSSGCL Trigger: AAGGCAGCCGGAGGAGGGCCACCCAGGCCCGAGATA...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | CAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGGGCCGCTGTAGGTCCTaGTTATGCACCAGCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: QTGSSALSLGDKETGVAQGRCRS*LCTSRT Trigger: TGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCC...CTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCGAGGCCTCCCTTGGTaGTGGAAGAGGGCTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRARGLPW*WKRATS Trigger: AGAGGTAGCCCTCTTCCACCACCAAGGGAGGCCTCG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTGCACCAGCCGCACAATaGAGATGGTCTCAGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RQTGSSALSLGDKETGVAAPAAQ*RWSQRG Trigger: GCCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGC...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTGGCCGCTGTAGGTCCTaGTTATGCACCAGCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: RETDWVFSTKFRGQRDWGGRCRS*LCTSRT Trigger: TGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCC...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTGTCCTCCAACATGGCTaGAGTGGTTTCCCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRAVLQHG*SGFPWL Trigger: CAGCCATGGGAAACCACTGCAGCCATGTTGGAGGAC...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | GAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGAAGAGGGCTACCTCTaGCCCTTGGGGTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ERQTGSSALSLGDKETGVEEGYL*PLGSSP Trigger: TGGAGAAGACCCCAAGGGGCAGAGGTAGCCCTCTTC...AACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTGAAGAGGGCTACCTCTaGCCCTTGGGGTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RQTGSSALSLGDKETGVAEEGYL*PLGSSP Trigger: TGGAGAAGACCCCAAGGGGCAGAGGTAGCCCTCTTC...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACCGCAGCCAGTCCCTTaGCACCTCCCGCATCTCATC | + |
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Preference number: 4 (lower is better) Translates to: NVEMSSSRGRNHRSTGKEPQPVP*HLPHLI Trigger: GATGAGATGCGGGAGGTGGCAAGGGACTGGCTGCGG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCCGGGGCTGTCAGCATaGAAAGGAACAAGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRAPGLSA*KGTRPT Trigger: TGTTGGCCTTGTTCCTTTCCATGCTGACAGCCCCGG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | GAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTACCTCTGCCCCTTaGGGTCTTCTCCAAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ERQTGSSALSLGDKETGVATSAP*GLLQVL Trigger: CAGGACTTGGAGAAGACCCCAAGGGGCAGAGGTAGC...AACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACGAGGCCTCCCTTGGTaGTGGAAGAGGGCTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGRGLPW*WKRATS Trigger: AGAGGTAGCCCTCTTCCACCACCAAGGGAGGCCTCG...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | GTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGATGAATTGCAGCGAGGCCTCCCTTaGTGGTGGAAGAGGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: VFSTKFRGQRDWGCSDELQRGLP*WWKRAT Trigger: GGTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTG...CAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACAGCGAGGCCTCCCTTaGTGGTGGAAGAGGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: NVEMSSSRGRNHRSTGKEQRGLP*WWKRAT Trigger: GGTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCAATGTCCACGACCATaGGGAAGATACTGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRAQCPRP*GRYWAA Trigger: TGCTGCCCAGTATCTTCCTCATGGTCGTGGACATTG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | GTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGATGAATTGGCACCAGCCGCACAATaGAGATGGTCTCAGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VFSTKFRGQRDWGCSDELAPAAQ*RWSQRG Trigger: GCCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGC...CAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTATGTCCTGGATGGTGTaGAGCCAGCTGGTGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRAMSWMV*SQLVKV Trigger: GACTTTCACCAGCTGGCTGCACACCATCCAGGACAT...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTTCAGTCTTGTTGGCTTaGAAGGTGGCTGGGGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRASVLLA*KVAGGL Trigger: TAGACCCCCAGCCACCTTCCAAGCCAACAAGACTGA...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCCAACATGGCTGCAGTaGTTTCCCATGGCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RQTGSSALSLGDKETGVAPTWLQ*FPMAEQ Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCATGTTGG...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | CTGATGAAGCTGAGTGTTAGGGAAGTACCCACAGGTGAGCTGAAGAGGGAGCCAGGATGGACAATTTGGTaGCATTGTCGAAGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LMKLSVREVPTGELKREPGWTIW*HCRSPQ Trigger: CTGAGGACTTCGACAATGTCACCAAATTGTCCATCC...TGGCTCCCTCTTCAGCTCACCTGTGGGTACTTCCCTAACACTCAGCTTCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTTGCTGGCAGTGTGTCTaGCACGATGATGAGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: ERQTGSSALSLGDKETGVCWQCV*HDDEED Trigger: GTCTTCCTCATCATCGTGTCAGACACACTGCCAGCA...AACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTTCCTCAGGAGTCCACTaGAGAAACTCATCAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MSSSRGRNHRSTGKETRASSGVH*RNSSVQ Trigger: CTGGACTGATGAGTTTCTGCAGTGGACTCCTGAGGA...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACCGGGGCTGTCAGCATaGAAAGGAACAAGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGPGLSA*KGTRPT Trigger: TGTTGGCCTTGTTCCTTTCCATGCTGACAGCCCCGG...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTAGTCATCAGTCTTGTTaGCTTGGAAGGTGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RQTGSSALSLGDKETGVASHQSC*LGRWLG Trigger: CCCCAGCCACCTTCCAAGCCAACAAGACTGATGACT...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | CAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGGATGATGAGGAAGACTaGGTATCCCAGAAGGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QTGSSALSLGDKETGVAQDDEED*VSQKEC Trigger: ACACTCCTTCTGGGATACTCAGTCTTCCTCATCATC...CTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGATGCTGGCAGTGTGTCTaGCACGATGATGAGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGCWQCV*HDDEED Trigger: GTCTTCCTCATCATCGTGTCAGACACACTGCCAGCA...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | CTGATGAAGCTGAGTGTTAGGGAAGTACCCACAGGTGAGCTGAAGAGGGAGCCATCACTAGCAGAGCCATaGACACCACAAAATAGACAC | + |
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Preference number: 4 (lower is better) Translates to: LMKLSVREVPTGELKREPSLAEP*TPQNRH Trigger: GTGTCTATTTTGTGGTGTGCATGGCTCTGCTAGTGA...TGGCTCCCTCTTCAGCTCACCTGTGGGTACTTCCCTAACACTCAGCTTCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTGTAATGTTGATGTCCTaGATGGTGTGCAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RETDWVFSTKFRGQRDWGVMLMS*MVCSQL Trigger: CAGCTGGCTGCACACCATCCAGGACATCAACATTAC...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGATCAGTCTTGTTGGCTTaGAAGGTGGCTGGGGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGSVLLA*KVAGGL Trigger: TAGACCCCCAGCCACCTTCCAAGCCAACAAGACTGA...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGAAGTCATCAGTCTTGTTaGCTTGGAAGGTGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGSHQSC*LGRWLG Trigger: CCCCAGCCACCTTCCAAGCCAACAAGACTGATGACT...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | GAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTTGCAGTGGTTTCCCATaGCTGAGCAGTCATCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ERQTGSSALSLGDKETGVCSGFP*LSSHQS Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCA...AACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217289.2 |
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| CDS-3UTR TCA 90 bp | GAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGGATGGACAATTTGGTaGCATTGTCGAAGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTGSSALSLGDKETGVGWTIW*HCRSPQ Trigger: CTGAGGACTTCGACAATGTCACCAAATTGTCCATCC...AACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTGATGATGAGGAAGACTaGGTATCCCAGAAGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RETDWVFSTKFRGQRDWGDDEED*VSQKEC Trigger: ACACTCCTTCTGGGATACTCAGTCTTCCTCATCATC...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGTCAGAGAGCAGTTCTaGACATCAAAGGGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTGSSALSLGDKETGVVREQF*TSKGKL Trigger: CAACTTCCCCTTTGATGTGCAGAACTGCTCTCTGAC...AACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGATGAATTGATGTCCTGGATGGTGTaGAGCCAGCTGGTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSTKFRGQRDWGCSDELMSWMV*SQLVKV Trigger: GACTTTCACCAGCTGGCTGCACACCATCCAGGACAT...CAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGATGTAGGTCCTGCTTATaGACCAGCCGCACAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGCRSCL*TSRTMK Trigger: CTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACA...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR TCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGAACTCGCCCTGATTTATaGAGATGCTCTTGTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGTRPDL*RCSCQT Trigger: GGTCTGACAAGAGCATCTTCATAAATCAGGGCGAGT...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTTCACTAGCAGAGCCATaGACACCACAAAATAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTGSSALSLGDKETGVASLAEP*TPQNRH Trigger: GTGTCTATTTTGTGGTGTGCATGGCTCTGCTAGTGA...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CCA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGATGCAGTGGTTTCCCATaGCTGGAAGAAGATCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HDREVRETDWVFSTKFRGCSGFP*LEEDQN Trigger: GTTCTGATCTTCTTCCAGCCATGGGAAACCACTGCA...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003826.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACTCGCCCTGATTTATaGAGATGCTCTTGTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NVEMSSSRGRNHRSTGKETRPDL*RCSCQT Trigger: GGTCTGACAAGAGCATCTTCATAAATCAGGGCGAGT...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGAGCTACCTCTGCCCCTTaGGGTCTTCTCCAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCRSLRHLCKTICFSLIRATSAP*GLLQVL Trigger: CAGGACTTGGAGAAGACCCCAAGGGGCAGAGGTAGC...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGAGTCCTCCAACATGGCTaGAGTGGTTTCCCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCRSLRHLCKTICFSLIRVLQHG*SGFPWL Trigger: CAGCCATGGGAAACCACTGCAGCCATGTTGGAGGAC...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CCA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGACGCTTCTCCAGGAAGTaGCGGATGGAGGATAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCRSLRHLCKTICFSLIRRFSRK*RMEDSS Trigger: AGAGCTATCCTCCATCCGCCACTTCCTGGAGAAGCG...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGATCCTCAGGAGTCCACTaGAGAAACTCATCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCRSLRHLCKTICFSLIRSSGVH*RNSSVQ Trigger: CTGGACTGATGAGTTTCTGCAGTGGACTCCTGAGGA...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR GCA 90 bp | GTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGATGAATTGGTAGAACTTCATTTCTaGATAGCTGTTACTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: VFSTKFRGQRDWGCSDELVELHF*IAVTDI Trigger: GATATCAGTAACAGCTATGCAGAAATGAAGTTCTAC...CAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGAGTAGAACTTCATTTCTaGATAGCTGTTACTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: KCRSLRHLCKTICFSLIRVELHF*IAVTDI Trigger: GATATCAGTAACAGCTATGCAGAAATGAAGTTCTAC...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 90 bp | GAGCAGGCTGGGTGGTATCTCGGGCCTGGGTGGCCCTCCTCCGGCTaGCTTCTCCCGGGGCTGTCAGCATGGAAAGGAACAAGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: EQAGWYLGPGWPSSG*LLPGLSAWKGTRPT Trigger: TGTTGGCCTTGTTCCTTTCCATGCTGACAGCCCCGGGAGAAGGCAGCCGGAGGAGGGCCACCCAGGCCCGAGATACCACCCAGCCTGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS GCA 90 bp | GAACAGCAGCCTGTCCAGCACGTATCCCACCCGCAGCCAGTCCCTTaGCACCTCCCGCATCTCATCCCGCTTCTCCAGGAAGTGGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EQQPVQHVSHPQPVP*HLPHLIPLLQEVAD Trigger: ATCCGCCACTTCCTGGAGAAGCGGGATGAGATGCGGGAGGTGGCAAGGGACTGGCTGCGGGTGGGATACGTGCTGGACAGGCTGCTGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 90 bp | TTGCCACCTCCCGCATCTCATCCCGCTTCTCCAGGAAGTGGCGGATaGAGGATAGCTCTTGCAAGAGACCGCGCACAGCCAGCGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPPASHPASPGSGG*RIALARDRAQPARP Trigger: AGGCCTCGCTGGCTGTGCGCGGTCTCTTGCAAGAGCTATCCTCCATCCGCCACTTCCTGGAGAAGCGGGATGAGATGCGGGAGGTGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS GCA 90 bp | AGGACCAGGTGCCTCAGCCAGTCAGGTACTGGCCGCTGTAGGTCCTaGTTATGCACCAGCCGCACAATGAAGATGGTCTCAGCGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTRCLSQSGTGRCRS*LCTSRTMKMVSARL Trigger: AAGCCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCCAGTACCTGACTGGCTGAGGCACCTGGTCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 90 bp | CTGCAGTGGTTTCCCATGGCTGAGCAGTCATCAGTCTTGTTGGCTTaGAAGGTGGCTGGGGGTCTATGGGCCATAGGCTGCTCCCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQWFPMAEQSSVLLA*KVAGGLWAIGCSPR Trigger: CCTAGGGGAGCAGCCTATGGCCCATAGACCCCCAGCCACCTTCCAAGCCAACAAGACTGATGACTGCTCAGCCATGGGAAACCACTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217289.2 |
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| CDS GCA 90 bp | TGCTCCCCTAGGCAGAGTATCCAGGCTATTCTGTCTAGGACCAGGTaGCTCAGCCAGTCAGGTACTGGCCGCTGTAGGTCCTGCTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: CSPRQSIQAILSRTR*LSQSGTGRCRSCLC Trigger: GCATAAGCAGGACCTACAGCGGCCAGTACCTGACTGGCTGAGGCACCTGGTCCTAGACAGAATAGCCTGGATACTCTGCCTAGGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCCAGCGAGGCCTCCCTaGGTGGTGGAAGAGGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: MSSSRGRNHRSTGKETRAPARPP*VVEEGY Trigger: GTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTGG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 90 bp | AGGTGCCTCAGCCAGTCAGGTACTGGCCGCTGTAGGTCCTGCTTATaGACCAGCCGCACAATGAAGATGGTCTCAGCGAGGCTTATCACT | + |
|
Preference number: 5 (lower is better) Translates to: RCLSQSGTGRCRSCL*TSRTMKMVSARLIT Trigger: AGTGATAAGCCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCCAGTACCTGACTGGCTGAGGCACCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 90 bp | GAGCAGTCATCAGTCTTGTTGGCTTGGAAGGTGGCTGGGGGTCTATaGGCCATAGGCTGCTCCCCTAGGCAGAGTATCCAGGCTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EQSSVLLAWKVAGGL*AIGCSPRQSIQAIL Trigger: CAGAATAGCCTGGATACTCTGCCTAGGGGAGCAGCCTATGGCCCATAGACCCCCAGCCACCTTCCAAGCCAACAAGACTGATGACTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCCCGCAGCCAGTCCCTaGCCACCTCCCGCATCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RQTGSSALSLGDKETGVAPAASP*PPPASH Trigger: ATGAGATGCGGGAGGTGGCAAGGGACTGGCTGCGGG...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS TCA 90 bp | CAGGTACTGGCCGCTGTAGGTCCTGCTTATGCACCAGCCGCACAATaGAGATGGTCTCAGCGAGGCTTATCACTAGCAGAGCCATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QVLAAVGPAYAPAAQ*RWSQRGLSLAEPCT Trigger: TGTGCATGGCTCTGCTAGTGATAAGCCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCCAGTACCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 90 bp | TGCCCCTTGGGGTCTTCTCCAAGTCCTGAGGTCCTCCAACATGGCTaGAGTGGTTTCCCATGGCTGGAAGAAGATCAGAACCTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPLGSSPSPEVLQHG*SGFPWLEEDQNLSS Trigger: ACTGCTCAGGTTCTGATCTTCTTCCAGCCATGGGAAACCACTGCAGCCATGTTGGAGGACCTCAGGACTTGGAGAAGACCCCAAGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003826.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTGGCTACCTCTGCCCCTaGGGGTCTTCTCCAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RETDWVFSTKFRGQRDWGGYLCP*GSSPSP Trigger: AGGACTTGGAGAAGACCCCAAGGGGCAGAGGTAGCC...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACCAGCGAGGCCTCCCTaGGTGGTGGAAGAGGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NVEMSSSRGRNHRSTGKEPARPP*VVEEGY Trigger: GTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTGG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACCCGCAGCCAGTCCCTaGCCACCTCCCGCATCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NVEMSSSRGRNHRSTGKEPAASP*PPPASH Trigger: ATGAGATGCGGGAGGTGGCAAGGGACTGGCTGCGGG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTCGCCACAGGGTAATGTaGATGTCCTGGATGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MSSSRGRNHRSTGKETRARHRVM*MSWMVC Trigger: GCACACCATCCAGGACATCAACATTACCCTGTGGCG...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTATCAGTCTTGTTGGCTaGGAAGGTGGCTGGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSSSRGRNHRSTGKETRAISLVG*EGGWGS Trigger: AGACCCCCAGCCACCTTCCAAGCCAACAAGACTGAT...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS TCA 90 bp | AACTCCTTGAACTGGGGGAACACCTCCAGCAGCTCCCACTCGCCCTaGTTTATGAAGATGCTCTTGTCAGACCTCACTTCTTCCGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSLNWGNTSSSSHSP*FMKMLLSDLTSSGD Trigger: ATCACCGGAAGAAGTGAGGTCTGACAAGAGCATCTTCATAAATCAGGGCGAGTGGGAGCTGCTGGAGGTGTTCCCCCAGTTCAAGGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 90 bp | TCTTCCGGTGATCGCCACAGGGTAATGTTGATGTCCTGGATGGTGTaGAGCCAGCTGGTGAAAGTCAGAGAGCAGTTCTGCACATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGDRHRVMLMSWMV*SQLVKVREQFCTSK Trigger: CTTTGATGTGCAGAACTGCTCTCTGACTTTCACCAGCTGGCTGCACACCATCCAGGACATCAACATTACCCTGTGGCGATCACCGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTACAGGCGGTCACCAATaGCAAGGGCTTGTAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MSSSRGRNHRSTGKETRATGGHQ*QGLVVL Trigger: CAGAACTACAAGCCCTTGCAATTGGTGACCGCCTGT...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | CAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGGAGCAGTCATCAGTCTaGTTGGCTTGGAAGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTGSSALSLGDKETGVAQEQSSV*LAWKVA Trigger: AGCCACCTTCCAAGCCAACAAGACTGATGACTGCTC...CTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS TCA 90 bp | GCCCTGATTTATGAAGATGCTCTTGTCAGACCTCACTTCTTCCGGTaGTCGCCACAGGGTAATGTTGATGTCCTGGATGGTGTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALIYEDALVRPHFFR*SPQGNVDVLDGVQP Trigger: TGGCTGCACACCATCCAGGACATCAACATTACCCTGTGGCGATCACCGGAAGAAGTGAGGTCTGACAAGAGCATCTTCATAAATCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGCTGAGTGTTAGGGAAGTACCCACAGGTGAGCTGAAGAGGGAGCCAGACAATTTGGTGACATaGTCGAAGTCCTCAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMKLSVREVPTGELKREPDNLVT*SKSSGV Trigger: GACTCCTGAGGACTTCGACAATGTCACCAAATTGTC...TGGCTCCCTCTTCAGCTCACCTGTGGGTACTTCCCTAACACTCAGCTTCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTGTGGGGATGGACAATTaGGTGACATTGTCGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSSSRGRNHRSTGKETRAVGMDN*VTLSKS Trigger: GGACTTCGACAATGTCACCAAATTGTCCATCCCCAC...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGCTGAGTGTTAGGGAAGTACCCACAGGTGAGCTGAAGAGGGAGCCAAGAAGGAGTGTGATCTaGAAAGAGACTCTCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LMKLSVREVPTGELKREPRRSVI*KETLSP Trigger: CGGTGAGAGAGTCTCTTTCAAGATCACACTCCTTCT...TGGCTCCCTCTTCAGCTCACCTGTGGGTACTTCCCTAACACTCAGCTTCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | CATGATAGGGAAGTCAGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGAATCAGTCTTGTTGGCTaGGAAGGTGGCTGGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HDREVRETDWVFSTKFRGISLVG*EGGWGS Trigger: AGACCCCCAGCCACCTTCCAAGCCAACAAGACTGAT...TCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCTGACTTCCCTATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTGAGCAGTCATCAGTCTaGTTGGCTTGGAAGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQTGSSALSLGDKETGVAEQSSV*LAWKVA Trigger: AGCCACCTTCCAAGCCAACAAGACTGATGACTGCTC...AGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACCAGGGCTGACAATTTGGTGACATaGTCGAAGTCCTCAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSSRGRNHRSTGKETRADNLVT*SKSSGV Trigger: GACTCCTGAGGACTTCGACAATGTCACCAAATTGTC...AGCCCTGGTTTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAACGCCACAGGGTAATGTaGATGTCCTGGATGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVEMSSSRGRNHRSTGKERHRVM*MSWMVC Trigger: GCACACCATCCAGGACATCAACATTACCCTGTGGCG...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTGCTCAGATGAATTGACAGGCGGTCACCAATaGCAAGGGCTTGTAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFSTKFRGQRDWGCSDELTGGHQ*QGLVVL Trigger: CAGAACTACAAGCCCTTGCAATTGGTGACCGCCTGT...CAATTCATCTGAGCAACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AGAGAGACAGACTGGGTCTTCAGCACTAAGTTTAGGGGACAAAGAGACTGGGGTTTCTTCTCATCCACGTaGAGGATGGCATACATGATG | + |
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Preference number: 5 (lower is better) Translates to: RETDWVFSTKFRGQRDWGFFSST*RMAYMM Trigger: CATCATGTATGCCATCCTCAACGTGGATGAGAAGAA...ACCCCAGTCTCTTTGTCCCCTAAACTTAGTGCTGAAGACCCAGTCTGTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAACGTCCACAAACTCATaGATGAGGATGTCAGGGACC | + |
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Preference number: 5 (lower is better) Translates to: NVEMSSSRGRNHRSTGKETSTNS*MRMSGT Trigger: GGTCCCTGACATCCTCATCAATGAGTTTGTGGACGT...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGAGGCTACCTCTGCCCCTaGGGGTCTTCTCCAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: KCRSLRHLCKTICFSLIRGYLCP*GSSPSP Trigger: AGGACTTGGAGAAGACCCCAAGGGGCAGAGGTAGCC...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAAAGAAGGAGTGTGATCTaGAAAGAGACTCTCTCACCG | + |
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Preference number: 5 (lower is better) Translates to: NVEMSSSRGRNHRSTGKERRSVI*KETLSP Trigger: CGGTGAGAGAGTCTCTTTCAAGATCACACTCCTTCT...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AATGTGGAAATGAGCAGTTCCAGGGGCCGTAATCACAGAAGTACTGGTAAGGAATTCTTCTCATCCACGTaGAGGATGGCATACATGATG | + |
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Preference number: 5 (lower is better) Translates to: NVEMSSSRGRNHRSTGKEFFSST*RMAYMM Trigger: CATCATGTATGCCATCCTCAACGTGGATGAGAAGAA...TTCCTTACCAGTACTTCTGTGATTACGGCCCCTGGAACTGCTCATTTCCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS-3UTR CAA 90 bp | AAGTGCAGAAGTCTCAGGCATCTATGCAAGACAATTTGCTTTTCTTTGATCAGACAGTCATCAGTCTTGTaGGCTTGGAAGGTGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: KCRSLRHLCKTICFSLIRQSSVL*AWKVAG Trigger: CCCAGCCACCTTCCAAGCCAACAAGACTGATGACTG...TCTGATCAAAGAAAAGCAAATTGTCTTGCATAGATGCCTGAGACTTCTGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | GGGTGGTATCTCGGGCCTGGGTGGCCCTCCTCCGGCTaGCTTCTCCCGGGGCTGTCAGCATGGAAAGGAACA | + |
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Preference number: 6 (lower is better) Translates to: GWYLGPGWPSSG*LLPGLSAWKGT Trigger: TGTTCCTTTCCATGCTGACAGCCCCGGGAGAAGGCAGCCGGAGGAGGGCCACCCAGGCCCGAGATACCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | TTAGTAGAGCAGGCTGGGTGGTATCTCGGGCCTGGGTaGCCCTCCTCCGGCTGCCTTCTCCCGGGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LVEQAGWYLGPG*PSSGCLLPGLS Trigger: TGACAGCCCCGGGAGAAGGCAGCCGGAGGAGGGCCACCCAGGCCCGAGATACCACCCAGCCTGCTCTACTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | GCCAGGAGGTGGTCTGACAGCCTTAGTAGAGCAGGCTaGGTGGTATCTCGGGCCTGGGTGGCCCTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: ARRWSDSLSRAG*VVSRAWVALLR Trigger: CCGGAGGAGGGCCACCCAGGCCCGAGATACCACCCAGCCTGCTCTACTAAGGCTGTCAGACCACCTCCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CAA 72 bp | CTTGCAAGAGACCGCGCACAGCCAGCGAGGCCTCCCTaGGTGGTGGAAGAGGGCTACCTCTGCCCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LARDRAQPARPP*VVEEGYLCPLG Trigger: CCCCAAGGGGCAGAGGTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTGGCTGTGCGCGGTCTCTTGCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | CCCTCCTCCGGCTGCCTTCTCCCGGGGCTGTCAGCATaGAAAGGAACAAGGCCAACAGCACCTGCGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: PSSGCLLPGLSA*KGTRPTAPAGC Trigger: GCATCCCGCAGGTGCTGTTGGCCTTGTTCCTTTCCATGCTGACAGCCCCGGGAGAAGGCAGCCGGAGGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | CAAGAGACCGCGCACAGCCAGCGAGGCCTCCCTTGGTaGTGGAAGAGGGCTACCTCTGCCCCTTGGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QETAHSQRGLPW*WKRATSAPWGL Trigger: AAGACCCCAAGGGGCAGAGGTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTGGCTGTGCGCGGTCTCTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | TTGCAAGAGACCGCGCACAGCCAGCGAGGCCTCCCTTaGTGGTGGAAGAGGGCTACCTCTGCCCCTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: LQETAHSQRGLP*WWKRATSAPWG Trigger: ACCCCAAGGGGCAGAGGTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTGGCTGTGCGCGGTCTCTTGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | CCTGTCCAGCACGTATCCCACCCGCAGCCAGTCCCTTaGCACCTCCCGCATCTCATCCCGCTTCTCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PVQHVSHPQPVP*HLPHLIPLLQE Trigger: TTCCTGGAGAAGCGGGATGAGATGCGGGAGGTGGCAAGGGACTGGCTGCGGGTGGGATACGTGCTGGACAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CAA 90 bp | AGGATAGCTCTTGCAAGAGACCGCGCACAGCCAGCGAGGCCTCCCTaGGTGGTGGAAGAGGGCTACCTCTGCCCCTTGGGGTCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RIALARDRAQPARPP*VVEEGYLCPLGSSP Trigger: TGGAGAAGACCCCAAGGGGCAGAGGTAGCCCTCTTCCACCACCAAGGGAGGCCTCGCTGGCTGTGCGCGGTCTCTTGCAAGAGCTATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | GCCACCTCCCGCATCTCATCCCGCTTCTCCAGGAAGTaGCGGATGGAGGATAGCTCTTGCAAGAGACCGCGC | + |
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Preference number: 6 (lower is better) Translates to: ATSRISSRFSRK*RMEDSSCKRPR Trigger: GCGCGGTCTCTTGCAAGAGCTATCCTCCATCCGCCACTTCCTGGAGAAGCGGGATGAGATGCGGGAGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CCA 72 bp | CCCGCATCTCATCCCGCTTCTCCAGGAAGTGGCGGATaGAGGATAGCTCTTGCAAGAGACCGCGCACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PASHPASPGSGG*RIALARDRAQP Trigger: TGGCTGTGCGCGGTCTCTTGCAAGAGCTATCCTCCATCCGCCACTTCCTGGAGAAGCGGGATGAGATGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | AGCCAGTCAGGTACTGGCCGCTGTAGGTCCTGCTTATaGACCAGCCGCACAATGAAGATGGTCTCAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SQSGTGRCRSCL*TSRTMKMVSAR Trigger: CCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCCAGTACCTGACTGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | AGGCAGAGTATCCAGGCTATTCTGTCTAGGACCAGGTaGCTCAGCCAGTCAGGTACTGGCCGCTGTAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RQSIQAILSRTR*LSQSGTGRCRS Trigger: GGACCTACAGCGGCCAGTACCTGACTGGCTGAGGCACCTGGTCCTAGACAGAATAGCCTGGATACTCTGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CAA 72 bp | CTGCAGTGGTTTCCCATGGCTGAGCAGTCATCAGTCTaGTTGGCTTGGAAGGTGGCTGGGGGTCTATGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LQWFPMAEQSSV*LAWKVAGGLWA Trigger: GGCCCATAGACCCCCAGCCACCTTCCAAGCCAACAAGACTGATGACTGCTCAGCCATGGGAAACCACTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217289.2 |
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| CDS CAA 90 bp | CCCATGGCTGGAAGAAGATCAGAACCTGAGCAGTCATCAGTCTTGTaGGCTTGGAAGGTGGCTGGGGGTCTATGGGCCATAGGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PMAGRRSEPEQSSVL*AWKVAGGLWAIGCS Trigger: GGAGCAGCCTATGGCCCATAGACCCCCAGCCACCTTCCAAGCCAACAAGACTGATGACTGCTCAGGTTCTGATCTTCTTCCAGCCATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003826.8 |
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| CDS GCA 72 bp | TGCCTCAGCCAGTCAGGTACTGGCCGCTGTAGGTCCTaGTTATGCACCAGCCGCACAATGAAGATGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CLSQSGTGRCRS*LCTSRTMKMVS Trigger: TGAGACCATCTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGCCAGTACCTGACTGGCTGAGGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS TCA 72 bp | GCCGCTGTAGGTCCTGCTTATGCACCAGCCGCACAATaGAGATGGTCTCAGCGAGGCTTATCACTAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AAVGPAYAPAAQ*RWSQRGLSLAE Trigger: CTCTGCTAGTGATAAGCCTCGCTGAGACCATCTTCATTGTGCGGCTGGTGCATAAGCAGGACCTACAGCGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | GGGTCTTCTCCAAGTCCTGAGGTCCTCCAACATGGCTaGAGTGGTTTCCCATGGCTGAGCAGTCATCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSPSPEVLQHG*SGFPWLSSHQS Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCAGCCATGTTGGAGGACCTCAGGACTTGGAGAAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217289.2 |
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| CDS TCA 72 bp | GGAACACCTCCAGCAGCTCCCACTCGCCCTGATTTATaGAGATGCTCTTGTCAGACCTCACTTCTTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GTPPAAPTRPDL*RCSCQTSLLPV Trigger: CACCGGAAGAAGTGAGGTCTGACAAGAGCATCTTCATAAATCAGGGCGAGTGGGAGCTGCTGGAGGTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | GGGTCTTCTCCAAGTCCTGAGGTCCTCCAACATGGCTaGAGTGGTTTCCCATGGCTGGAAGAAGATCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GSSPSPEVLQHG*SGFPWLEEDQN Trigger: GTTCTGATCTTCTTCCAGCCATGGGAAACCACTGCAGCCATGTTGGAGGACCTCAGGACTTGGAGAAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003826.8 |
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| CDS CCA 72 bp | CCTGAGGTCCTCCAACATGGCTGCAGTGGTTTCCCATaGCTGGAAGAAGATCAGAACCTGAGCAGTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: PEVLQHGCSGFP*LEEDQNLSSHQ Trigger: CTGATGACTGCTCAGGTTCTGATCTTCTTCCAGCCATGGGAAACCACTGCAGCCATGTTGGAGGACCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003826.8 |
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| CDS CAA 72 bp | TCAGGGACCCAGATGCTGTCTGTGGGGATGGACAATTaGGTGACATTGTCGAAGTCCTCAGGAGTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: SGTQMLSVGMDN*VTLSKSSGVHC Trigger: GCAGTGGACTCCTGAGGACTTCGACAATGTCACCAAATTGTCCATCCCCACAGACAGCATCTGGGTCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CAA 72 bp | ATGAGGAAGACTGAGTATCCCAGAAGGAGTGTGATCTaGAAAGAGACTCTCTCACCGCTGTCCGGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MRKTEYPRRSVI*KETLSPLSGGR Trigger: CCTGCCCCCGGACAGCGGTGAGAGAGTCTCTTTCAAGATCACACTCCTTCTGGGATACTCAGTCTTCCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS TCA 72 bp | TATGAAGATGCTCTTGTCAGACCTCACTTCTTCCGGTaGTCGCCACAGGGTAATGTTGATGTCCTGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: YEDALVRPHFFR*SPQGNVDVLDG Trigger: ACCATCCAGGACATCAACATTACCCTGTGGCGATCACCGGAAGAAGTGAGGTCTGACAAGAGCATCTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS GCA 72 bp | AATTTGGTGACATTGTCGAAGTCCTCAGGAGTCCACTaGAGAAACTCATCAGTCCAGTACTGCCGGTACCAT | + |
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Preference number: 6 (lower is better) Translates to: NLVTLSKSSGVH*RNSSVQYCRYH Trigger: ATGGTACCGGCAGTACTGGACTGATGAGTTTCTGCAGTGGACTCCTGAGGACTTCGACAATGTCACCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CAA 72 bp | GAAGTTGTAGATGTCAAGGCTACAGGCGGTCACCAATaGCAAGGGCTTGTAGTTCTGAACTTCACCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: EVVDVKATGGHQ*QGLVVLNFTSM Trigger: CATCGAGGTGAAGTTCAGAACTACAAGCCCTTGCAATTGGTGACCGCCTGTAGCCTTGACATCTACAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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| CDS CAA 90 bp | ATCAAAGGGGAAGTTGTAGATGTCAAGGCTACAGGCGGTCACCAATaGCAAGGGCTTGTAGTTCTGAACTTCACCTCGATGATGCACGTA | + |
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Preference number: 6 (lower is better) Translates to: IKGEVVDVKATGGHQ*QGLVVLNFTSMMHV Trigger: TACGTGCATCATCGAGGTGAAGTTCAGAACTACAAGCCCTTGCAATTGGTGACCGCCTGTAGCCTTGACATCTACAACTTCCCCTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003826.8 ENSMUST00000217289.2 |
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