Pregenerated sensors for HTR2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034997Ensembl transcript IDs: ENSMUST00000036653.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGCTACTGCTAACAGCGAGAAACCTGAGTTTAATGTTCAGCTGTaGCAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATGC | + |
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Preference number: 1 (lower is better) Translates to: EATANSEKPEFNVQL*QSTLCTGHCSKGAC Trigger: GCATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACATTAAACTCAGGTTTCTCGCTGTTAGCAGTAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR GCA 90 bp | CGCAACACAGTCATTTCCCTAGTGAGTTACCAAATACCTCCGGGATaGTGTTTCTTTGAAGCGAGTTCTAGAACTGTACTTGGAAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: RNTVISLVSYQIPPG*CFFEASSRTVLGKV Trigger: TACTTTTCCAAGTACAGTTCTAGAACTCGCTTCAAAGAAACAGCATCCCGGAGGTATTTGGTAACTCACTAGGGAAATGACTGTGTTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR TCA 90 bp | TTAGGCAAGCACTCTTTTATCAACTGGGCTACGTTGCCAGCTCTTTaGAAACACCAGTTTTACCTGATAACTGTCAATATGAAAGTCACT | + |
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Preference number: 1 (lower is better) Translates to: LGKHSFINWATLPAL*KHQFYLITVNMKVT Trigger: AGTGACTTTCATATTGACAGTTATCAGGTAAAACTGGTGTTTTCAAAGAGCTGGCAACGTAGCCCAGTTGATAAAAGAGTGCTTGCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR TCA 90 bp | ACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCTTTAACTaGGTTTTTCTTAAATATGGCGTTGAATCCCTTAAGTCTAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TMRWRCGPIDYVSFN*VFLKYGVESLKSSR Trigger: TCTACTAGACTTAAGGGATTCAACGCCATATTTAAGAAAAACTCAGTTAAAGCTTACATAATCTATTGGACCACAGCGCCATCTCATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCATAGCTGAGGGTGACTaGATTCCTGATCCTCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSIAEGD*IPDPLA Trigger: GGCGAGAGGATCAGGAATTCAGTCACCCTCAGCTAT...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR GCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCTGCTCAAAGGGCGCATaGGCAACACAGTCATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSCSKGA*ATQSFP Trigger: GGGAAATGACTGTGTTGCGCATGCGCCCTTTGAGCA...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCTGATACTTGCCTTTTaGCTGGAAGCTAGTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSLILAF*LEASVC Trigger: ACAGACACTAGCTTCCAGTCAAAAGGCAAGTATCAG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR GCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCAGCCATGCACCGTGGTaGCTGTTATGTTATGTTATG | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSSHAPW*LLCYVM Trigger: CATAACATAACATAACAGGCACCACGGTGCATGGCT...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCGTCACAGTGTCATGGTaGATTCACTATAACTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSVTVSW*IHYNWP Trigger: AGGCCAGTTATAGTGAATCCACCATGACACTGTGAC...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCTGGAGTAGTCTAATTTaGTCTGAGCCTCCTTATCCT | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSWSSLI*SEPPYP Trigger: AGGATAAGGAGGCTCAGATCAAATTAGACTACTCCA...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGTTTAATGTTCAGCTGTaGCAGTCAACTCTTTGTACT | + |
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Preference number: 2 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMFNVQL*QSTLCT Trigger: AGTACAAAGAGTTGACTGTCACAGCTGAACATTAAA...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTACGTTGCCAGCTCTTTaGAAACACCAGTTTTACCTG | + |
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Preference number: 2 (lower is better) Translates to: SAGFLFILMKSKFMELESTLPAL*KHQFYL Trigger: CAGGTAAAACTGGTGTTTTCAAAGAGCTGGCAACGT...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTTACCCATCAACAACATaGCAGCCCGGTTTCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: SAGFLFILMKSKFMELESYPSTT*QPGFYL Trigger: CAAATAGAAACCGGGCTGCCATGTTGTTGATGGGTA...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCTACTTGCCTTTTGACTaGAAGCTAGTGTCTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSYLPFD*KLVSVR Trigger: TCTGACAGACACTAGCTTCCAGTCAAAAGGCAAGTA...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR CAA 90 bp | TTTCTACATGCTTTAGTTCCTAAACCTGTAACATTTCCCAAAGGCTaGCAACAAAACACCTTTGTAGCCAATAAGGATGTTTCAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLHALVPKPVTFPKG*QQNTFVANKDVSAF Trigger: AAAGGCTGAAACATCCTTATTGGCTACAAAGGTGTTTTGTTGCAAGCCTTTGGGAAATGTTACAGGTTTAGGAACTAAAGCATGTAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CAA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCACGTGGGTGTAAACTaGTTCACACACCCTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSHVGVN*FTHPGQ Trigger: TTGCCCAGGGTGTGTGAACAAGTTTACACCCACGTG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR GCA 72 bp | GATGTTTCAGCCTTTTACTCTGTCTCAACAGTAATGTaGAATTCACCGGTGTGTCACAGTGTCATGGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: DVSAFYSVSTVM*NSPVCHSVMVD Trigger: ATCCACCATGACACTGTGACACACCGGTGAATTGCACATTACTGTTGAGACAGAGTAAAAGGCTGAAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CAA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCGGGATGCTGTTTCTTaGAAGCGAGTTCTAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSRDAVS*KRVLEL Trigger: CAGTTCTAGAACTCGCTTCAAAGAAACAGCATCCCG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR TCA 72 bp | TCTGTAGTAGCCATTTCTACTGAACGTTATGGTAGCTaGTACTTGCCTTTTGACTGGAAGCTAGTGTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SVVAISTERYGS*YLPFDWKLVSV Trigger: GACAGACACTAGCTTCCAGTCAAAAGGCAAGTATCAGCTACCATAACGTTCAGTAGAAATGGCTACTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR CCA 72 bp | GTCACCAACTTACTCCCATGCTACCCATCAACAACATaGCAGCCCGGTTTCTATTTGACAATAGAAGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: VTNLLPCYPSTT*QPGFYLTIEVN Trigger: ATTAACTTCTATTGTCAAATAGAAACCGGGCTGCCATGTTGTTGATGGGTAGCATGGGAGTAAGTTGGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTTACGTTGCCAGCTCTTaGAAAACACCAGTTTTACCT | + |
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Preference number: 3 (lower is better) Translates to: SAGFLFILMKSKFMELESYVASS*KTPVLP Trigger: AGGTAAAACTGGTGTTTTCAAAGAGCTGGCAACGTA...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR TCA 72 bp | CACTCTTTTATCAACTGGGCTACGTTGCCAGCTCTTTaGAAACACCAGTTTTACCTGATAACTGTCAATATG | + |
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Preference number: 3 (lower is better) Translates to: HSFINWATLPAL*KHQFYLITVNM Trigger: CATATTGACAGTTATCAGGTAAAACTGGTGTTTTCAAAGAGCTGGCAACGTAGCCCAGTTGATAAAAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR GCA 72 bp | TTTTATATACAACAATATGTCACCAACTTACTCCCATaGTACCCATCAACAACATGGCAGCCCGGTTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: FYIQQYVTNLLP*YPSTTWQPGFY Trigger: ATAGAAACCGGGCTGCCATGTTGTTGATGGGTAGCATGGGAGTAAGTTGGTGACATATTGTTGTATATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR GCA 72 bp | TTTAAGACCCTTCCACGTCTGAGAATTAATGACAAATaGAGCAAATGCCAGCGGTCTTGTGAACATTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: FKTLPRLRINDK*SKCQRSCEHFK Trigger: TTTGAAATGTTCACAAGACCGCTGGCATTTGCTGCATTTGTCATTAATTCTCAGACGTGGAAGGGTCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTACATTTCCCAAAGGCTaGCAACAAAACACCTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: SAGFLFILMKSKFMELESTFPKG*QQNTFV Trigger: TACAAAGGTGTTTTGTTGCAAGCCTTTGGGAAATGT...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR TCA 72 bp | AAAGCCCAAGAAGTAGAAGAGAAAGCAGCGAGTTATTaGATAACATTTAAGACCCTTCCACGTCTGAGAATT | + |
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Preference number: 3 (lower is better) Translates to: KAQEVEEKAASY*ITFKTLPRLRI Trigger: AATTCTCAGACGTGGAAGGGTCTTAAATGTTATTCAATAACTCGCTGCTTTCTCTTCTACTTCTTGGGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| 3UTR CAA 72 bp | CCTCCTTATCCTGCCCCCACACACGTGGGTGTAAACTaGTTCACACACCCTGGGCAATCGTCCCAGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: PPYPAPTHVGVN*FTHPGQSSQHP Trigger: CGGATGCTGGGACGATTGCCCAGGGTGTGTGAACAAGTTTACACCCACGTGTGTGGGGGCAGGATAAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATGCCTGCGTAGGAGCCTaGCTCTCTGTGGATGGACCG | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHACVGA*LSVDGP Trigger: CGGTCCATCCACAGAGAGCCAGGCTCCTACGCAGGC...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR GCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATTCGTTGCTGATGGACTaGATCGTCCTTCGGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHSLLMD*IVLRPA Trigger: CGCAGGCCGAAGGACGATGCAGTCCATCAGCAACGA...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGCGGCACAGAGCTTGCTaGGCAAAGGCCACCGGTACC | + |
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Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMRHRAC*AKATGT Trigger: GGTACCGGTGGCCTTTGCCCAGCAAGCTCTGTGCCG...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR GCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGCATCGTCCTTCGGCCTaGGTAGGAGCCTGGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMHRPSA*VGAWLS Trigger: AGAGAGCCAGGCTCCTACGCAGGCCGAAGGACGATG...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATCTTTGGTTCTGGAGTTaGAGCGGCTATGGTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHLWFWS*SGYGEW Trigger: CCATTCACCATAGCCGCTTCAACTCCAGAACCAAAG...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR GCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCAGACGGCACAGAGCTTaGTGGGCAAAGGCCACCGGT | + |
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Preference number: 4 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSRRHRA*WAKATG Trigger: ACCGGTGGCCTTTGCCCAGCAAGCTCTGTGCCGTCT...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATCCCGAAGACTGGGATTaGCATGGATATACCTACGGA | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHPEDWD*HGYTYG Trigger: TCCGTAGGTATATCCATGCCAATCCCAGTCTTCGGG...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATCTGTGGATGGACCGCTaGAAGAGCTTTTCTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHLWMDR*KSFSDD Trigger: GTCATCAGAAAAGCTCTTCCAGCGGTCCATCCACAG...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGCAGTGGGTTGACGGCTaGGGAGAGATAACCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMQWVDG*GEITNP Trigger: TGGATTGGTTATCTCTCCTCAGCCGTCAACCCACTG...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGTCCTTGTACTGGCACTaGATGTACCGTGAGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMSLYWH*MYREKA Trigger: CGCCTTCTCACGGTACATTCAGTGCCAGTACAAGGA...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR GCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATACAGAAAGAACACGATaGCCAGCACCTTGCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHTERTR*PAPCML Trigger: AAGCATGCAAGGTGCTGGGCATCGTGTTCTTTCTGT...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGCCTGGAGATGAAGAATaGAGAGGCATGTCGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMPGDEE*RGMSVG Trigger: TCCCACCGACATGCCTCTCCATTCTTCATCTCCAGG...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTGAGCCTGGCTCTCTGTaGATGGACCGCTGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESEPGSL*MDRWKS Trigger: GCTCTTCCAGCGGTCCATCCACAGAGAGCCAGGCTC...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATAGACTGGGATTGGCATaGATATACCTACGGATATGG | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHRLGLA*IYLRIW Trigger: CCATATCCGTAGGTATATCCATGCCAATCCCAGTCT...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATCACTCACACACAAGGTaGCTTCTTTCTGAAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHHSHTR*LLSEVT Trigger: AGTCACTTCAGAAAGAAGCCACCTTGTGTGTGAGTG...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATATCTCTTCCGAGTGTTaGTTCCCTAGTGTAACCATG | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHISSEC*FPSVTM Trigger: CATGGTTACACTAGGGAACCAACACTCGGAAGAGAT...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTACATGGACACGGGCATaGCAAGGAAACCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESTWTRA*QGNPAA Trigger: TGCTGCTGGGTTTCCTTGTCATGCCCGTGTCCATGT...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATGGCTTCTTTCTGAAGTaGCTTGATAGTCAGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHGFFLK*LDSQEV Trigger: TACTTCCTGACTATCAAGTCACTTCAGAAAGAAGCC...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTATTTGGCCCGAGTGCTaGGGTCACTCACACACAAGG | + |
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Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESIWPEC*GHSHTR Trigger: CCTTGTGTGTGAGTGACCTCAGCACTCGGGCCAAAT...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS-3UTR TCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCTCTGAGGGAGGAAGCTaGAGGAGGATAATTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSSEGGS*RRIIWP Trigger: GGGCCAAATTATCCTCCTTCAGCTTCCTCCCTCAGA...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR GCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGACCTTGCATGCTTTTTaGTCGTTGCTGATGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMTLHAF*SLLMDC Trigger: GCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGT...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTTTGAAGCGGCTATGGTaGATGGGGTTCTGGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESLKRLW*MGFWIA Trigger: GGCTATCCAGAACCCCATTCACCATAGCCGCTTCAA...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR TCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGAAGGTGGCTTCTTTCTaGAGTGACTTGATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMKVASF*SDLIVR Trigger: CCTGACTATCAAGTCACTTCAGAAAGAAGCCACCTT...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTGATGACAGAGAACTCTaGGGGAGGAAGCTGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESDDREL*GRKLKE Trigger: CTCCTTCAGCTTCCTCCCTCAGAGTTCTCTGTCATC...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR GCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCGCCCAGCACCTTGCATaGTTTTTGCTCGTTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSAQHLA*FLLVAD Trigger: ATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGC...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTCTGGCTCTCTGTGGATaGACCGCTGGAAGAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESLALCG*TAGRAF Trigger: AAAAGCTCTTCCAGCGGTCCATCCACAGAGAGCCAG...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR TCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGATCAGCTATGGCAAGTaGCATCAGGAAATAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMISYGK*HQEIVG Trigger: ACCAACTATTTCCTGATGTCACTTGCCATAGCTGAT...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR TCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCCACAAAAGAGCCTATaGGGACAAAGTTGTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSPQKSL*GQSCHR Trigger: CCGATGACAACTTTGTCCTCATAGGCTCTTTTGTGG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTGGTACCCATACAGGATaGTTAACATGGACACGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESGTHTG*LTWTRA Trigger: TGCCCGTGTCCATGTTAACCATCCTGTATGGGTACC...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CCA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCTTCGCAGGAGAGGTTaGTTCTGTTTTCAGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSLRRRG*FCFQHQ Trigger: TTGATGCTGAAAACAGAACCAACCTCTCCTGCGAAG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGACATCAGGAAATAGTTaGTGGCATTCTGCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMTSGNS*WHSAAF Trigger: AAAAGCTGCAGAATGCCACCAACTATTTCCTGATGT...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| 3UTR CAA 72 bp | ATGGAATTAGAATCTGCACCCGTTCCTTCATACGTATaGGCATGTGCAGAGTTTCAAACTAAGGCAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: MELESAPVPSYV*ACAEFQTKAKH Trigger: GTGTTTTGCCTTAGTTTGAAACTCTGCACATGCCAATACGTATGAAGGAACGGGTGCAGATTCTAATTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR GCA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGGAGTCGTCACCTAATTaGATTAAGGAGTTTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMESSPN*IKEFGI Trigger: AATTCCAAACTCCTTAATGCAATTAGGTGACGACTC...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTGCAGCATATCAGCTATaGCAAGTGACATCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESAAYQL*QVTSGN Trigger: ATTTCCTGATGTCACTTGCCATAGCTGATATGCTGC...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| 3UTR CAA 72 bp | GCTTTAGTTCCTAAACCTGTAACATTTCCCAAAGGCTaGCAACAAAACACCTTTGTAGCCAATAAGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVPKPVTFPKG*QQNTFVANKDV Trigger: AACATCCTTATTGGCTACAAAGGTGTTTTGTTGCAAGCCTTTGGGAAATGTTACAGGTTTAGGAACTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTATTGGTGATGAAGAATaGGCACCACATTACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAGFLFILMKSKFMELESIGDEE*APHYNK Trigger: TTTGTTGTAATGTGGTGCCCATTCTTCATCACCAAT...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS TCA 90 bp | GAAAGAACACGATGCCCAGCACCTTGCATGCTTTTTGCTCGTTGCTaGTGGACTGCATCGTCCTTCGGCCTGCGTAGGAGCCTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERTRCPAPCMLFARC*WTASSFGLRRSLAL Trigger: GAGAGCCAGGCTCCTACGCAGGCCGAAGGACGATGCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCGTGTTCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 90 bp | ACTGCATCGTCCTTCGGCCTGCGTAGGAGCCTGGCTCTCTGTGGATaGACCGCTGGAAGAGCTTTTCTGATGACAGAGAACTCTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TASSFGLRRSLALCG*TAGRAFLMTENSEG Trigger: TCCCTCAGAGTTCTCTGTCATCAGAAAAGCTCTTCCAGCGGTCCATCCACAGAGAGCCAGGCTCCTACGCAGGCCGAAGGACGATGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS GCA 90 bp | CCGTGGAGAAGAGCACATCCAGGTAAATCCAGACGGCACAGAGCTTaGTGGGCAAAGGCCACCGGTACCCATACAGGATGGTTAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: PWRRAHPGKSRRHRA*WAKATGTHTGWLTW Trigger: CCATGTTAACCATCCTGTATGGGTACCGGTGGCCTTTGCCCAGCAAGCTCTGTGCCGTCTGGATTTACCTGGATGTGCTCTTCTCCACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS TCA 90 bp | CTGTGGATGGACCGCTGGAAGAGCTTTTCTGATGACAGAGAACTCTaGGGGAGGAAGCTGAAGGAGGATAATTTGGCCCGAGTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LWMDRWKSFSDDREL*GRKLKEDNLARVLR Trigger: CCTCAGCACTCGGGCCAAATTATCCTCCTTCAGCTTCCTCCCTCAGAGTTCTCTGTCATCAGAAAAGCTCTTCCAGCGGTCCATCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS GCA 90 bp | CCACATTACAACAAACAGAAAGAACACGATGCCCAGCACCTTGCATaGTTTTTGCTCGTTGCTGATGGACTGCATCGTCCTTCGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PHYNKQKEHDAQHLA*FLLVADGLHRPSAC Trigger: GCAGGCCGAAGGACGATGCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCGTGTTCTTTCTGTTTGTTGTAATGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCAGACGGCACAGAGCTaGCTGGGCAAAGGCCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSQTAQS*LGKGHR Trigger: CCGGTGGCCTTTGCCCAGCAAGCTCTGTGCCGTCTG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGCCTATGAGGACAAAGTaGTCATCGGCGAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMPMRTK*SSASRQ Trigger: CTGCCTGCTCGCCGATGACAACTTTGTCCTCATAGG...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 90 bp | GCAGGATTCTTTGCAGATGACGGCCATGATATTGGTGATGAAGAATaGGCACCACATTACAACAAACAGAAAGAACACGATGCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGFFADDGHDIGDEE*APHYNKQKEHDAQH Trigger: GTGCTGGGCATCGTGTTCTTTCTGTTTGTTGTAATGTGGTGCCCATTCTTCATCACCAATATCATGGCCGTCATCTGCAAAGAATCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGCACCTTGCATGCTTTTaGCTCGTTGCTGATGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMHLACF*LVADGL Trigger: CAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTG...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATTCATTGCAGGATTCTTaGCAGATGACGGCCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHSLQDS*QMTAMI Trigger: TATCATGGCCGTCATCTGCAAAGAATCCTGCAATGA...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS TCA 90 bp | CTGCAGCGGCTTTCTGTTCTCCTTGTACTGGCACTGAATGTACCGTaGGAAGGCGGACCTATAAGTTTTATTGAACAACGTATATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQRLSVLLVLALNVP*EGGPISFIEQRIYQ Trigger: CTGGTATATACGTTGTTCAATAAAACTTATAGGTCCGCCTTCTCACGGTACATTCAGTGCCAGTACAAGGAGAACAGAAAGCCGCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTAGGATTACAGCCATGCACCGTGGTGCCTGTTATGTTATGTTATGTTATGATTTTCAGGAAGGCTTaGGTTCTGGAGTTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLQPCTVVPVMLCYVMIFRKA*VLELKR Trigger: CCGCTTCAACTCCAGAACCAAAGCCTTCCTGAAAAT...CATAACATAACATAACATAACAGGCACCACGGTGCATGGCTGTAATCCTAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTGCCCGAAGACTGGGATaGGCATGGATATACCTACGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGFLFILMKSKFMELESARRLG*AWIYLR Trigger: CCGTAGGTATATCCATGCCAATCCCAGTCTTCGGGC...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCCATGCTTTTTGCTCGTaGCTGATGGACTGCATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSHAFCS*LMDCIV Trigger: GACGATGCAGTCCATCAGCAACGAGCAAAAAGCATG...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTACGATGCCCAGCACCTaGCATGCTTTTTGCTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAGFLFILMKSKFMELESTMPST*HAFCSL Trigger: CAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCGT...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAGCTGTGACAGTCAACTCTTTGTACTGGTCACTGCTCAAAGGGCGCATTTCACGGTTTCAATATaGTCTGTACACATCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MFSCDSQLFVLVTAQRAHFTVSI*SVHISS Trigger: GGAAGAGATGTGTACAGACAATATTGAAACCGTGAA...ATGCGCCCTTTGAGCAGTGACCAGTACAAAGAGTTGACTGTCACAGCTGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTCCTTCGCAGGAGAGGTaGGTTCTGTTTTCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGFLFILMKSKFMELESPSQER*VLFSAS Trigger: TGATGCTGAAAACAGAACCAACCTCTCCTGCGAAGG...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTGAGCTCAGGGAGATATaGTCTTCACAGAGAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGFLFILMKSKFMELESELREI*SSQRIS Trigger: GGAAATTCTCTGTGAAGACAATATCTCCCTGAGCTC...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | CATTTTTCAAAACTGACCATGAGATGGCGCTGTGGTCCAATAGATTATGTAAGCTTAAGGAGTTTGGAATaGAGCTCAGGGAGATATTGT | + |
|
Preference number: 5 (lower is better) Translates to: HFSKLTMRWRCGPIDYVSLRSLE*SSGRYC Trigger: ACAATATCTCCCTGAGCTCAATTCCAAACTCCTTAA...GCTTACATAATCTATTGGACCACAGCGCCATCTCATGGTCAGTTTTGAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCGGGGTTTCTGTTCATTCTGATGAAGAGTAAGTTCATGGAATTAGAATCTCCAATGACATTTTCATaGCAGGATTCTTTGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SAGFLFILMKSKFMELESPMTFS*QDSLQM Trigger: CATCTGCAAAGAATCCTGCAATGAAAATGTCATTGG...AGATTCTAATTCCATGAACTTACTCTTCATCAGAATGAACAGAAACCCCGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 72 bp | GATGGACTGCATCGTCCTTCGGCCTGCGTAGGAGCCTaGCTCTCTGTGGATGGACCGCTGGAAGAGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DGLHRPSACVGA*LSVDGPLEELF Trigger: GAAAAGCTCTTCCAGCGGTCCATCCACAGAGAGCCAGGCTCCTACGCAGGCCGAAGGACGATGCAGTCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS TCA 72 bp | CGATGCCCAGCACCTTGCATGCTTTTTGCTCGTTGCTaGTGGACTGCATCGTCCTTCGGCCTGCGTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCPAPCMLFARC*WTASSFGLRRS Trigger: GCTCCTACGCAGGCCGAAGGACGATGCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS GCA 72 bp | AGAGCACATCCAGGTAAATCCAGACGGCACAGAGCTTaGTGGGCAAAGGCCACCGGTACCCATACAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RAHPGKSRRHRA*WAKATGTHTGW Trigger: CCATCCTGTATGGGTACCGGTGGCCTTTGCCCAGCAAGCTCTGTGCCGTCTGGATTTACCTGGATGTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 72 bp | TCCTTCGGCCTGCGTAGGAGCCTGGCTCTCTGTGGATaGACCGCTGGAAGAGCTTTTCTGATGACAGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SFGLRRSLALCG*TAGRAFLMTEN Trigger: GTTCTCTGTCATCAGAAAAGCTCTTCCAGCGGTCCATCCACAGAGAGCCAGGCTCCTACGCAGGCCGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 72 bp | GCACATCCAGGTAAATCCAGACGGCACAGAGCTTGCTaGGCAAAGGCCACCGGTACCCATACAGGATGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: AHPGKSRRHRAC*AKATGTHTGWL Trigger: TAACCATCCTGTATGGGTACCGGTGGCCTTTGCCCAGCAAGCTCTGTGCCGTCTGGATTTACCTGGATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 72 bp | GGCATGTCGGTGGGAGGTACCCTTCGCAGGAGAGGTTaGTTCTGTTTTCAGCATCAATTGTCCAGTTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GMSVGGTLRRRG*FCFQHQLSSSR Trigger: CCTCGAACTGGACAATTGATGCTGAAAACAGAACCAACCTCTCCTGCGAAGGGTACCTCCCACCGACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS GCA 72 bp | AGAAAGAACACGATGCCCAGCACCTTGCATGCTTTTTaGTCGTTGCTGATGGACTGCATCGTCCTTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RKNTMPSTLHAF*SLLMDCIVLRP Trigger: AGGCCGAAGGACGATGCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCGTGTTCTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CAA 90 bp | TACAACAAACAGAAAGAACACGATGCCCAGCACCTTGCATGCTTTTaGCTCGTTGCTGATGGACTGCATCGTCCTTCGGCCTGCGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YNKQKEHDAQHLACF*LVADGLHRPSACVG Trigger: TCCTACGCAGGCCGAAGGACGATGCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCGTGTTCTTTCTGTTTGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CCA 72 bp | TTTTTCCTGGAGATGAAGAATGGAGAGGCATGTCGGTaGGAGGTACCCTTCGCAGGAGAGGTTGGTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FFLEMKNGEACR*EVPFAGEVGSV Trigger: AACAGAACCAACCTCTCCTGCGAAGGGTACCTCCCACCGACATGCCTCTCCATTCTTCATCTCCAGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS CAA 72 bp | AGACCTTCGAATCATCCTGTAGCCCGAAGACTGGGATaGGCATGGATATACCTACGGATATGGTCCACACCG | + |
|
Preference number: 6 (lower is better) Translates to: RPSNHPVARRLG*AWIYLRIWSTP Trigger: CGGTGTGGACCATATCCGTAGGTATATCCATGCCAATCCCAGTCTTCGGGCTACAGGATGATTCGAAGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
||
| CDS GCA 72 bp | AACAAACAGAAAGAACACGATGCCCAGCACCTTGCATaGTTTTTGCTCGTTGCTGATGGACTGCATCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: NKQKEHDAQHLA*FLLVADGLHRP Trigger: AGGACGATGCAGTCCATCAGCAACGAGCAAAAAGCATGCAAGGTGCTGGGCATCGTGTTCTTTCTGTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS CAA 72 bp | ATGAAAAATGCCACAAAAGAGCCTATGAGGACAAAGTaGTCATCGGCGAGCAGGCAGCTCCCTTCCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: MKNATKEPMRTK*SSASRQLPSLK Trigger: CTTTAAGGAAGGGAGCTGCCTGCTCGCCGATGACAACTTTGTCCTCATAGGCTCTTTTGTGGCATTTTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS TCA 72 bp | GAGGTCACTCACACACAAGGTGGCTTCTTTCTGAAGTaGCTTGATAGTCAGGAAGTAGGTGATCACCATGAT | + |
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Preference number: 6 (lower is better) Translates to: EVTHTQGGFFLK*LDSQEVGDHHD Trigger: ATCATGGTGATCACCTACTTCCTGACTATCAAGTCACTTCAGAAAGAAGCCACCTTGTGTGTGAGTGACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS CAA 72 bp | AGAGCCTCGAGTCGTCACCTAATTGCATTAAGGAGTTaGGAATTGAGCTCAGGGAGATATTGTCTTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: RASSRHLIALRS*ELSSGRYCLHR Trigger: TCTGTGAAGACAATATCTCCCTGAGCTCAATTCCAAACTCCTTAATGCAATTAGGTGACGACTCGAGGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS TCA 72 bp | CTTTCTGTTCTCCTTGTACTGGCACTGAATGTACCGTaGGAAGGCGGACCTATAAGTTTTATTGAACAACGT | + |
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Preference number: 6 (lower is better) Translates to: LSVLLVLALNVP*EGGPISFIEQR Trigger: ACGTTGTTCAATAAAACTTATAGGTCCGCCTTCTCACGGTACATTCAGTGCCAGTACAAGGAGAACAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS CAA 72 bp | AGCAGGGCTCCAATGACATTTTCATTGCAGGATTCTTaGCAGATGACGGCCATGATATTGGTGATGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SRAPMTFSLQDS*QMTAMILVMKN Trigger: ATTCTTCATCACCAATATCATGGCCGTCATCTGCAAAGAATCCTGCAATGAAAATGTCATTGGAGCCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS CAA 72 bp | CACACACAGCTAACCTTTTCATTCACGGTTTCAATATaGTCTGTACACATCTCTTCCGAGTGTTGGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HTQLTFSFTVSI*SVHISSECWFP Trigger: AGGGAACCAACACTCGGAAGAGATGTGTACAGACAATATTGAAACCGTGAATGAAAAGGTTAGCTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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| CDS CAA 72 bp | TCGAGTCGTCACCTAATTGCATTAAGGAGTTTGGAATaGAGCTCAGGGAGATATTGTCTTCACAGAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: SSRHLIALRSLE*SSGRYCLHREF Trigger: AAATTCTCTGTGAAGACAATATCTCCCTGAGCTCAATTCCAAACTCCTTAATGCAATTAGGTGACGACTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036653.5 |
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