Pregenerated sensors for HTR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049511Ensembl transcript IDs: ENSMUST00000051005.5, ENSMUST00000183482.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCAGAGTGCTCTCTCAGAGAAGCTAGGCTTCTGCCGGGGCCTCTaGGGATCCATTGCCCTTGCCCAGAAGAGAGAGCCTTGCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: FQSALSEKLGFCRGL*GSIALAQKREPCFH Trigger: GTGGAAGCAAGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCTCAGAGGCCCCGGCAGAAGCCTAGCTTCTCTGAGAGAGCACTCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | AGAGAAGCTAGGCTTCTGCCGGGGCCTCTGAGGATCCATTGCCCTTaGCCAGAAGAGAGAGCCTTGCTTCCACCCAGTAACAGGGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: REARLLPGPLRIHCP*PEERALLPPSNRER Trigger: TCTTTCCCTGTTACTGGGTGGAAGCAAGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCTCAGAGGCCCCGGCAGAAGCCTAGCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR TCA 90 bp | GGATACCCATCCATCACCAATGTTAAAAAGTTGCAACCTTTTGTGTaGATGGCTGCTGGAGGATCTGTGCTGAGCCCGGACTTTGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GYPSITNVKKLQPFV*MAAGGSVLSPDFEW Trigger: CCACTCAAAGTCCGGGCTCAGCACAGATCCTCCAGCAGCCATTCACACAAAAGGTTGCAACTTTTTAACATTGGTGATGGATGGGTATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR TCA 90 bp | GCTGAGCAACCCAGCCTATCCTCTTTCCGTGGGGATTTAAGTGTGTaGAATGACAGGTACGTGAGATTAGAAAACAAAGCAGCCTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: AEQPSLSSFRGDLSV*NDRYVRLENKAACR Trigger: TCTGCAGGCTGCTTTGTTTTCTAATCTCACGTACCTGTCATTTCACACACTTAAATCCCCACGGAAAGAGGATAGGCTGGGTTGCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR TCA 90 bp | GCAACCCAGCCTATCCTCTTTCCGTGGGGATTTAAGTGTGTGAAATaGCAGGTACGTGAGATTAGAAAACAAAGCAGCCTGCAGACTTTG | + |
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Preference number: 1 (lower is better) Translates to: ATQPILFPWGFKCVK*QVREIRKQSSLQTL Trigger: CAAAGTCTGCAGGCTGCTTTGTTTTCTAATCTCACGTACCTGTCATTTCACACACTTAAATCCCCACGGAAAGAGGATAGGCTGGGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | GAGTTCTCCCCAGAGCATAGAGTATTAATTGTCAAGTTCAAGTACTaGCAGGCTGTATGTAGAGGTGTCTCAGGCCTCAGACAACATCTA | + |
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Preference number: 1 (lower is better) Translates to: EFSPEHRVLIVKFKY*QAVCRGVSGLRQHL Trigger: TAGATGTTGTCTGAGGCCTGAGACACCTCTACATACAGCCTGGCAGTACTTGAACTTGACAATTAATACTCTATGCTCTGGGGAGAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR CCA 90 bp | CGTACCCCTGGGATGAATATACACCTTGCATATCATGTGCAATGCTaGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: RTPGMNIHLAYHVQC*TMILDLLSLQRFAS Trigger: GCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGCACATGATATGCAAGGTGTATATTCATCCCAGGGGTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTaGAAGCTTCTATTGGATACACGATGCCCCAAATTCAGTCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: AMLDDDPRSLITTKV*KLLLDTRCPKFSQF Trigger: GAACTGACTGAATTTGGGGCATCGTGTATCCAATAGAAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | ATGCGTACCCCTGGGATGAATATACACCTTGCATATCATGTGCAATaGTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: MRTPGMNIHLAYHVQ*WTMILDLLSLQRFA Trigger: TGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGCACATGATATGCAAGGTGTATATTCATCCCAGGGGTACGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | AGCTTAACAGTCCTAAATGCGTACCCCTGGGATGAATATACACCTTaGATATCATGTGCAATGCTGGACGATGATCCTAGATCTCTTATC | + |
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Preference number: 1 (lower is better) Translates to: SLTVLNAYPWDEYTP*ISCAMLDDDPRSLI Trigger: GATAAGAGATCTAGGATCATCGTCCAGCATTGCACATGATATGCAAGGTGTATATTCATCCCAGGGGTACGCATTTAGGACTGTTAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | TTCAGACACAGAACTCCAACAAATACACACAGTCTGAGACATTACTaGTTGAGTGAGCTAGAGTCCTCTCAGTGCTTCCTGCTTAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: FRHRTPTNTHSLRHY*LSELESSQCFLLKE Trigger: TTCTTTAAGCAGGAAGCACTGAGAGGACTCTAGCTCACTCAAGCAGTAATGTCTCAGACTGTGTGTATTTGTTGGAGTTCTGTGTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR TCA 90 bp | CAGACAAAAGGTCTCCAGTGCAGACAGCCTCTGAAGCAAGGACTGTaGATCTTCTTTGGCATATTAAACATTCCACATACACATTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: QTKGLQCRQPLKQGL*IFFGILNIPHTHLF Trigger: GAACAAATGTGTATGTGGAATGTTTAATATGCCAAAGAAGATTCACAGTCCTTGCTTCAGAGGCTGTCTGCACTGGAGACCTTTTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | CACAGTCTGAGACATTACTGCTTGAGTGAGCTAGAGTCCTCTCAGTaGTTCCTGCTTAAAGAAGGTAAAACTAAGATAATAGAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: HSLRHYCLSELESSQ*FLLKEGKTKIIERK Trigger: CTTCCTCTCTATTATCTTAGTTTTACCTTCTTTAAGCAGGAAGCACTGAGAGGACTCTAGCTCACTCAAGCAGTAATGTCTCAGACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 90 bp | CTCGGCTTTTCTACATTTCTAATGTGTAATCTTCCTAGCTGCTCCTaGCCAAACTTTAATAGTAAGGACAAAACAAGCTGGAATCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LGFSTFLMCNLPSCS*PNFNSKDKTSWNLS Trigger: AGAGAGATTCCAGCTTGTTTTGTCCTTACTATTAAAGTTTGGGCAGGAGCAGCTAGGAAGATTACACATTAGAAATGTAGAAAAGCCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR CCA 90 bp | ATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTCTATTaGATACACGATGCCCCAAATTCAGTCAGTTCAGCCAAATACTCA | + |
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Preference number: 1 (lower is better) Translates to: MILDLLSLQRFASFY*IHDAPNSVSSAKYS Trigger: TGAGTATTTGGCTGAACTGACTGAATTTGGGGCATCGTGTATCCAATAGAAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | CTAATGTTTCCAAGGCTAGAAGGCTTGCCAGTTTCCTGGTTGTTTAATAAGCCTTTCTGCCGGGGCCTCTaGGGATCCATTGCCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LMFPRLEGLPVSWLFNKPFCRGL*GSIALA Trigger: GGCAAGGGCAATGGATCCTCAGAGGCCCCGGCAGAA...AGGCTTATTAAACAACCAGGAAACTGGCAAGCCTTCTAGCCTTGGAAACATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACAATCCACTTGAACTCTaGCAGCTGCAGGTTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLGAFSRFLNRETSSLGYNPLEL*QLQVGL Trigger: CAGCCCAACCTGCAGCTGTCAGAGTTCAAGTGGATT...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAAGGATCCATTGCCCTTaGCCAGAAGAGAGAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLGPKKTQLHKQKTNILTRIHCP*PEERAL Trigger: CAAGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCT...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACATTCAAGGTTGCTCTGTaGCGTCCAAGCCACATTCAG | + |
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Preference number: 2 (lower is better) Translates to: LLGPKKTQLHKQKTNILTFKVAL*RPSHIQ Trigger: CTGAATGTGGCTTGGACGGCACAGAGCAACCTTGAA...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR CAA 90 bp | AGACACAGAACTCCAACAAATACACACAGTCTGAGACATTACTGCTaGAGTGAGCTAGAGTCCTCTCAGTGCTTCCTGCTTAAAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RHRTPTNTHSLRHYC*SELESSQCFLLKEG Trigger: ACCTTCTTTAAGCAGGAAGCACTGAGAGGACTCTAGCTCACTCAAGCAGTAATGTCTCAGACTGTGTGTATTTGTTGGAGTTCTGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTGATTTGACCTACCTGTaGAAAGACCCAACTTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: AMLDDDPRSLITTKVCKLDLTYL*KDPTWS Trigger: GGACCAAGTTGGGTCTTTTCACAGGTAGGTCAAATC...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | TCCACATACACATTTGTTCTTACAGTTAACCCTTCAGGACTGCTTCTTTTTATTGCTGAGCCCGGACTTTaGGTGGAGGAAGCTAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: STYTFVLTVNPSGLLLFIAEPGL*VEEAKF Trigger: GAACTTAGCTTCCTCCACTCAAAGTCCGGGCTCAGC...AATAAAAAGAAGCAGTCCTGAAGGGTTAACTGTAAGAACAAATGTGTATGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACGCACACATCATGTTTTaGGTTGTTAAGAGCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLGAFSRFLNRETSSLGYAHIMF*VVKSCG Trigger: TCCACAGCTCTTAACAACTCAAAACATGATGTGTGC...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACATTTCTAATGTGTAATCTTCCTAGCTGCTCCTGCCCAAACTTTAATAGTAGCCCGGACTTTGAGTaGAGGAAGCTAAGTTCCTCG | + |
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Preference number: 2 (lower is better) Translates to: STFLMCNLPSCSCPNFNSSPDFE*RKLSSS Trigger: CGAGGAACTTAGCTTCCTCCACTCAAAGTCCGGGCT...ACTATTAAAGTTTGGGCAGGAGCAGCTAGGAAGATTACACATTAGAAATGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CCA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTAAGGACAAAACAAGCTaGAATCTCTCTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: AMLDDDPRSLITTKVCKLKDKTS*NLSLSL Trigger: GAGAGAGAGAGAGAGATTCCAGCTTGTTTTGTCCTT...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR CAA 90 bp | GATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTCTATaGGATACACGATGCCCCAAATTCAGTCAGTTCAGCCAAATACTC | + |
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Preference number: 2 (lower is better) Translates to: DDPRSLITTKVCKLL*DTRCPKFSQFSQIL Trigger: GAGTATTTGGCTGAACTGACTGAATTTGGGGCATCGTGTATCCAATAGAAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGTTGCAACCTTTTGTGTaGATGGCTGCTGGAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VSSLRNKLCLYAIGTAKELQPFV*MAAGGS Trigger: AGATCCTCCAGCAGCCATTCACACAAAAGGTTGCAA...CTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTGTTCACATTCCAGAGTaGTCTCTCAGAGAAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: VQFKKQTMLICNRNCKGAVHIPE*SLREAR Trigger: CCTAGCTTCTCTGAGAGAGCACTCTGGAATGTGAAC...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACATTTCTAATGTGTAATCTTCCTAGCTGCTCCTGCCCAAACTTTAATAGTTTTTGTGTGAATGGCTaGTGGAGGATCTGTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: STFLMCNLPSCSCPNFNSFCVNG*WRICAE Trigger: CTCAGCACAGATCCTCCAGCAGCCATTCACACAAAA...ACTATTAAAGTTTGGGCAGGAGCAGCTAGGAAGATTACACATTAGAAATGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTTTAACTCTTCAAGGTTaGTCTGTGCCGTCCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VQFKKQTMLICNRNCKGALTLQG*SVPSKP Trigger: TGGCTTGGACGGCACAGAGCAACCTTGAAGAGTTAA...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTAACCTTTTGTGTGAATaGCTGCTGGAGGATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VQFKKQTMLICNRNCKGANLLCE*LLEDLC Trigger: GCACAGATCCTCCAGCAGCCATTCACACAAAAGGTT...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAGCTTCACACAGGGAGTaGATCCATTTTATAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LLGPKKTQLHKQKTNILTASHRE*IHFIKT Trigger: TGTCTTTATAAAATGGATCCACTCCCTGTGTGAAGC...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCAGGGAAAGAAGATTTaGCCTACCTGTGAAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: VSSLRNKLCLYAIGTAKEQGKKI*PTCEKT Trigger: GGTCTTTTCACAGGTAGGTCAAATCTTCTTTCCCTG...CTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTGGGAGAGAGTGCAAATaGTTATCAAAAATTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: AMLDDDPRSLITTKVCKLGRECK*LSKIVS Trigger: TGAGACAATTTTTGATAATCATTTGCACTCTCTCCC...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACATTTCTAATGTGTAATCTTCCTAGCTGCTCCTGCCCAAACTTTAATAGTGTCAAGTTCAAGTACTaGCAGGCTGTATGTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: STFLMCNLPSCSCPNFNSVKFKY*QAVCRG Trigger: ACCTCTACATACAGCCTGGCAGTACTTGAACTTGAC...ACTATTAAAGTTTGGGCAGGAGCAGCTAGGAAGATTACACATTAGAAATGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACACCAATGTTAAAAAGTTaGAACCTTTTGTGTGAATGG | + |
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Preference number: 2 (lower is better) Translates to: LLGPKKTQLHKQKTNILTPMLKS*NLLCEW Trigger: CCATTCACACAAAAGGTTGCAACTTTTTAACATTGG...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR CAA 90 bp | AGGTCACTAATGTTTCCAAGGCTAGAAGGCTTGCCAGTTTCCTGGTaGTTTAATAAGCCTGAGGTTTGGTTCTATATAAGTTATAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RSLMFPRLEGLPVSW*FNKPEVWFYISYKE Trigger: TTCTTTATAACTTATATAGAACCAAACCTCAGGCTTATTAAACAACCAGGAAACTGGCAAGCCTTCTAGCCTTGGAAACATTAGTGACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR TCA 72 bp | GCTCTCTCAGAGAAGCTAGGCTTCTGCCGGGGCCTCTaGGGATCCATTGCCCTTGCCCAGAAGAGAGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: ALSEKLGFCRGL*GSIALAQKREP Trigger: AGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCTCAGAGGCCCCGGCAGAAGCCTAGCTTCTCTGAGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 72 bp | AGGCTTCTGCCGGGGCCTCTGAGGATCCATTGCCCTTaGCCAGAAGAGAGAGCCTTGCTTCCACCCAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: RLLPGPLRIHCP*PEERALLPPSN Trigger: GTTACTGGGTGGAAGCAAGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCTCAGAGGCCCCGGCAGAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 72 bp | AGCTTTACAGTAGTTTGCGTTGTTCACATTCCAGAGTaGTCTCTCAGAGAAGCTAGGCTTCTGCCGGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SFTVVCVVHIPE*SLREARLLPGP Trigger: AGGCCCCGGCAGAAGCCTAGCTTCTCTGAGAGAGCACTCTGGAATGTGAACAACGCAAACTACTGTAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAGAGGATCCATTGCCCTaGCCCAGAAGAGAGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: LLGPKKTQLHKQKTNILTEDPLP*PRRESL Trigger: AAGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCTC...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR TCA 72 bp | AGGTTGCTCTGTGCCGTCCAAGCCACATTCAGTGTTTaGAGCACCAAATCCACAAGTTTCTCCGACCAAATT | + |
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Preference number: 3 (lower is better) Translates to: RLLCAVQATFSV*STKSTSFSDQI Trigger: AATTTGGTCGGAGAAACTTGTGGATTTGGTGCTTCAAACACTGAATGTGGCTTGGACGGCACAGAGCAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 72 bp | GGCAGGGATACCCATCCATCACCAATGTTAAAAAGTTaGAACCTTTTGTGTGAATGGCTGCTGGAGGATCTG | + |
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Preference number: 3 (lower is better) Translates to: GRDTHPSPMLKS*NLLCEWLLEDL Trigger: CAGATCCTCCAGCAGCCATTCACACAAAAGGTTGCAACTTTTTAACATTGGTGATGGATGGGTATCCCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CAA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACACAACTCTAATCCACTaGAACTCTGACAGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: VLGAFSRFLNRETSSLGYTTLIH*NSDSCR Trigger: CCTGCAGCTGTCAGAGTTCAAGTGGATTAGAGTTGT...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 72 bp | GCTAAGTTCCTCGGGTATGGAAGCTTTACAGTAGTTTaGGTTGTTCACATTCCAGAGTGCTCTCTCAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: AKFLGYGSFTVV*VVHIPECSLRE Trigger: TTCTCTGAGAGAGCACTCTGGAATGTGAACAACGCAAACTACTGTAAAGCTTCCATACCCGAGGAACTTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR GCA 72 bp | AGAACTCCAACAAATACACACAGTCTGAGACATTACTaGTTGAGTGAGCTAGAGTCCTCTCAGTGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: RTPTNTHSLRHY*LSELESSQCFL Trigger: CAGGAAGCACTGAGAGGACTCTAGCTCACTCAAGCAGTAATGTCTCAGACTGTGTGTATTTGTTGGAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| 3UTR-3UTR CAA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACAGCCACATTCAGTGTTaGAAGCACCAAATCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLGAFSRFLNRETSSLGYSHIQC*KHQIHK Trigger: CTTGTGGATTTGGTGCTTCAAACACTGAATGTGGCT...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR TCA 72 bp | CCTATCCTCTTTCCGTGGGGATTTAAGTGTGTGAAATaGCAGGTACGTGAGATTAGAAAACAAAGCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PILFPWGFKCVK*QVREIRKQSSL Trigger: CAGGCTGCTTTGTTTTCTAATCTCACGTACCTGTCATTTCACACACTTAAATCCCCACGGAAAGAGGATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR TCA 72 bp | CCCAGCCTATCCTCTTTCCGTGGGGATTTAAGTGTGTaGAATGACAGGTACGTGAGATTAGAAAACAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLSSFRGDLSV*NDRYVRLENKA Trigger: TGCTTTGTTTTCTAATCTCACGTACCTGTCATTTCACACACTTAAATCCCCACGGAAAGAGGATAGGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR TCA 72 bp | GGTCTCCAGTGCAGACAGCCTCTGAAGCAAGGACTGTaGATCTTCTTTGGCATATTAAACATTCCACATACA | + |
|
Preference number: 3 (lower is better) Translates to: GLQCRQPLKQGL*IFFGILNIPHT Trigger: TGTATGTGGAATGTTTAATATGCCAAAGAAGATTCACAGTCCTTGCTTCAGAGGCTGTCTGCACTGGAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTGTTAACTCTTCAAGGTaGCTCTGTGCCGTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VQFKKQTMLICNRNCKGAVNSSR*LCAVQA Trigger: GGCTTGGACGGCACAGAGCAACCTTGAAGAGTTAAC...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR GCA 72 bp | GCATCTTTTCAAGAGTCATTACCCAATGTGAAGGTCTaGACAGTAGGCAAGCAGTATAATTCAGCTCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: ASFQESLPNVKV*TVGKQYNSAHY Trigger: GTAGTGAGCTGAATTATACTGCTTGCCTACTGTGCAGACCTTCACATTGGGTAATGACTCTTGAAAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CCA 72 bp | TCCTGCCCAAACTTTAATAGTAAGGACAAAACAAGCTaGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SCPNFNSKDKTS*NLSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTCCAGCTTGTTTTGTCCTTACTATTAAAGTTTGGGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTGTGAAAAGACCCAACTaGGTCCCCAAAGGTCGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VQFKKQTMLICNRNCKGAVKRPN*VPKGRL Trigger: TAAGCGACCTTTGGGGACCAAGTTGGGTCTTTTCAC...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTGTTAAGAGCTGTGGATaGACGATCACTAAACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AMLDDDPRSLITTKVCKLVKSCG*TITKQE Trigger: TTCCTGTTTAGTGATCGTCAATCCACAGCTCTTAAC...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR GCA 72 bp | GACGATGATCCTAGATCTCTTATCACTACAAAGGTTTaGAAGCTTCTATTGGATACACGATGCCCCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: DDDPRSLITTKV*KLLLDTRCPKF Trigger: GAATTTGGGGCATCGTGTATCCAATAGAAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR GCA 72 bp | CCTGGGATGAATATACACCTTGCATATCATGTGCAATaGTGGACGATGATCCTAGATCTCTTATCACTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PGMNIHLAYHVQ*WTMILDLLSLQ Trigger: TTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGCACATGATATGCAAGGTGTATATTCATCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CCA 72 bp | GGGATGAATATACACCTTGCATATCATGTGCAATGCTaGACGATGATCCTAGATCTCTTATCACTACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GMNIHLAYHVQC*TMILDLLSLQR Trigger: CCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGCACATGATATGCAAGGTGTATATTCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGCTTAGCATCAGAATTTaGCTGTTAACTCTTCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSIGGIFKISEQGNQLSWLSIRI*LLTLQG Trigger: ACCTTGAAGAGTTAACAGCAAAATTCTGATGCTAAG...CCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATACTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR TCA 72 bp | GAGATACGCTTAAATTATTTCCAATGTTCTAGTCACTaGAGTGGCAGGTCACTAATGTTTCCAAGGCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EIRLNYFQCSSH*SGRSLMFPRLE Trigger: TTCTAGCCTTGGAAACATTAGTGACCTGCCACTTCAGTGACTAGAACATTGGAAATAATTTAAGCGTATCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTGGGAAACCAGCTCTCTaGGTTACTTTAAAAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VQFKKQTMLICNRNCKGAGKPAL*VTLKIH Trigger: GTGAATTTTTAAAGTAACCAAGAGAGCTGGTTTCCC...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | AGATTTGACCTACCTGTGAAAAGACCCAACTTGGTCCCCAAAGGTCGCTTAGGCTGTGGGAGAGGTTGGTaGGAGGTACCCCTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RFDLPVKRPNLVPKGRLGCGRGW*EVPLSG Trigger: CCCAGACAGGGGTACCTCTCACCAACCTCTCCCACA...GCCTAAGCGACCTTTGGGGACCAAGTTGGGTCTTTTCACAGGTAGGTCAAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTTAACTCTTCAAGGTTGCTCTGTGCCGTCCAAGCCACATTCAGTGTTTCTCGGGTCAAGCGCTTaGCGGTCTTGTTGGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTLQGCSVPSKPHSVFLGSSA*RSCWVS Trigger: AGACACCCAACAAGACCGGCAAGCGCTTGACCCGAG...AAACACTGAATGTGGCTTGGACGGCACAGAGCAACCTTGAAGAGTTAACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTAGAGGTACCCCTGTCTaGGAGGCGGCGGGAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQFKKQTMLICNRNCKGARGTPV*EAAGGG Trigger: GCCGCCTCCCGCCGCCTCCCAGACAGGGGTACCTCT...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGTTAACTCTTCAAGGTTGCTCTGTGCCGTCCAAGCCACATTCAGTGTTTAAGTCGCAGACCACCTaGCCTAGTGTCCAGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTLQGCSVPSKPHSVFKSQTT*PSVQRP Trigger: TGGACGCTGGACACTAGGCCAGGTGGTCTGCGACTT...AAACACTGAATGTGGCTTGGACGGCACAGAGCAACCTTGAAGAGTTAACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTGACCTACCTGTGAAAAGACCCAACTTGGTCCCCAAAGGTCGCTTAGGCTCTCCTCCTCTGCTTTaGCTTGACGCCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFDLPVKRPNLVPKGRLGSPPLL*LDARRR Trigger: CCTTCTTCTGGCGTCAAGCCAAAGCAGAGGAGGAGA...GCCTAAGCGACCTTTGGGGACCAAGTTGGGTCTTTTCACAGGTAGGTCAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CAA 72 bp | CTGAGGATCCATTGCCCTTGCCCAGAAGAGAGAGCCTaGCTTCCACCCAGTAACAGGGAAAGAAGATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRIHCPCPEERA*LPPSNRERRFD Trigger: GTCAAATCTTCTTTCCCTGTTACTGGGTGGAAGCAAGGCTCTCTCTTCTGGGCAAGGGCAATGGATCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGTTTCCAAGGCTAGAAGGCTTGCCAGTTTCCTGGTTGTTTAATAAGCCTACACCAGCACGATCATaGTGGCCGCCCTTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LMFPRLEGLPVSWLFNKPTPARS*WPPFWE Trigger: CTCCCAAAAGGGCGGCCATCATGATCGTGCTGGTGT...AGGCTTATTAAACAACCAGGAAACTGGCAAGCCTTCTAGCCTTGGAAACATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAGGCCATAGAGGGCGATaGGGAGCAGGGTGGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGPKKTQLHKQKTNILTGHRGR*GAGWVN Trigger: ATTTACCCACCCTGCTCCTCATCGCCCTCTATGGCC...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR GCA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACGAGCAGGTCAGTGACTaGCAGAGAGGCGATCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGAFSRFLNRETSSLGYEQVSD*QRGDQV Trigger: TACCTGATCGCCTCTCTGGCAGTCACTGACCTGCTC...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTTCGGCGCTGCAGTTGTaGGAGAGGTTGGTGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMLDDDPRSLITTKVCKLSALQL*ERLVRG Trigger: ACCTCTCACCAACCTCTCCCACAACTGCAGCGCCGA...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACCGATTACAAAGGCGTTaGAGAGCGTGGTGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGAFSRFLNRETSSLGYRLQRR*RAWWPR Trigger: CCTTGGCCACCACGCTCTCCAACGCCTTTGTAATCG...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTACTCCACCGCATCGGTaGTGGCCCAGTAGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQFKKQTMLICNRNCKGATPPHR*WPSSGP Trigger: TGGACCGCTACTGGGCCATCACCGATGCGGTGGAGT...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACATCCAGGGCAGGGCGATaGAGTCCTGGTAAATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGPKKTQLHKQKTNILTSRAGR*SPGKCS Trigger: GCTACATTTACCAGGACTCCATCGCCCTGCCCTGGA...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAAGAAAGCGCCCACCGTaGAGTAGACCGTGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGPKKTQLHKQKTNILTRKRPP*SRPCRG Trigger: TCCTCTACACGGTCTACTCCACGGTGGGCGCTTTCT...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACCTGAGACTCGCACTTTaGCTTGGTTCACGTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGAFSRFLNRETSSLGYLRLAL*LGSRTQ Trigger: CTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAG...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAGAGTCTGTTATCAACTaGGCTCGGGTCAAGCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGPKKTQLHKQKTNILTESVIN*ARVKRL Trigger: CAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTC...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTGACCTACCTGTGAAAAGACCCAACTTGGTCCCCAAAGGTCGCTTAGGCAAGCGTATCAGTTTGTaGAACGCTTGTTTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFDLPVKRPNLVPKGRLGKRISL*NACLKS Trigger: GGACTTCAAACAAGCGTTCCACAAACTGATACGCTT...GCCTAAGCGACCTTTGGGGACCAAGTTGGGTCTTTTCACAGGTAGGTCAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CAA 72 bp | AAGGTTGCTCTGTGCCGTCCAAGCCACATTCAGTGTTaGAAGCACCAAATCCACAAGTTTCTCCGACCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVALCRPSHIQC*KHQIHKFLRPN Trigger: ATTTGGTCGGAGAAACTTGTGGATTTGGTGCTTCAAACACTGAATGTGGCTTGGACGGCACAGAGCAACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CAA 72 bp | AGTGGCAGGTCACTAATGTTTCCAAGGCTAGAAGGCTaGCCAGTTTCCTGGTTGTTTAATAAGCCTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSLMFPRLEG*PVSWLFNKPEV Trigger: AACCTCAGGCTTATTAAACAACCAGGAAACTGGCAAGCCTTCTAGCCTTGGAAACATTAGTGACCTGCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CAA 72 bp | ACTCCAACAAATACACACAGTCTGAGACATTACTGCTaGAGTGAGCTAGAGTCCTCTCAGTGCTTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTNTHSLRHYC*SELESSQCFLL Trigger: AAGCAGGAAGCACTGAGAGGACTCTAGCTCACTCAAGCAGTAATGTCTCAGACTGTGTGTATTTGTTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATACACATTTGTTCTTACAGTTAACCCTTCAGGACTGCTTCTTTTTATTCCGTGTACATGGTGCTaGTGGGCATCACCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: STYTFVLTVNPSGLLLFIPCTWC*WASPGW Trigger: CCATCCTGGTGATGCCCATCAGCACCATGTACACGG...AATAAAAAGAAGCAGTCCTGAAGGGTTAACTGTAAGAACAAATGTGTATGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTTTCCAGCAGGGCGTCTaGGACTCGCACTTTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQFKKQTMLICNRNCKGAFQQGV*DSHFDL Trigger: CAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAA...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTGCTTGCCGGTCTTGTTaGGTGTCTGTTTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AMLDDDPRSLITTKVCKLACRSC*VSVSKS Trigger: GGATTTTGAAACAGACACCCAACAAGACCGGCAAGC...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| 3UTR CAA 72 bp | TTTCCCCCTTCATTCCTCAATTATATAAGAAGTCGCTaGTGTTTCTTCAGTCTCCTCTGCGCAGCATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPPSFLNYIRSR*CFFSLLCAAWN Trigger: GTTCCATGCTGCGCAGAGGAGACTGAAGAAACACAAGCGACTTCTTATATAATTGAGGAATGAAGGGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGTTTCCAAGGCTAGAAGGCTTGCCAGTTTCCTGGTTGTTTAATAAGCCTTCAAAAATGGCCATGTaGAACCAGCAGGCATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LMFPRLEGLPVSWLFNKPSKMAM*NQQASL Trigger: TAAGGATGCCTGCTGGTTTCACATGGCCATTTTTGA...AGGCTTATTAAACAACCAGGAAACTGGCAAGCCTTCTAGCCTTGGAAACATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCAGCATCTCCTCCTCTaGTTTGGCTTGACGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSLRNKLCLYAIGTAKEQHLLL*FGLTPE Trigger: TTCTGGCGTCAAGCCAAAGCAGAGGAGGAGATGCTG...CTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATACACATTTGTTCTTACAGTTAACCCTTCAGGACTGCTTCTTTTTATTAAGCAGTGCAACAGGTaGTATCCGACGACAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STYTFVLTVNPSGLLLFIKQCNR*YPTTAR Trigger: TCTGGCTGTCGTCGGATATCACCTGTTGCACTGCTT...AATAAAAAGAAGCAGTCCTGAAGGGTTAACTGTAAGAACAAATGTGTATGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCTACTCGCACTTTGACTTaGTTCACGTACACAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VQFKKQTMLICNRNCKGATRTLT*FTYTGD Trigger: GTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGT...AGCTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS-3UTR CCA 90 bp | TCCACATACACATTTGTTCTTACAGTTAACCCTTCAGGACTGCTTCTTTTTATTACGCCAGAAGAAGGGTaGCAACGAAATAGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: STYTFVLTVNPSGLLLFITPEEG*QRNRDG Trigger: TCCATCTCTATTTCGTTGCCACCCTTCTTCTGGCGT...AATAAAAAGAAGCAGTCCTGAAGGGTTAACTGTAAGAACAAATGTGTATGTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
||
| CDS TCA 90 bp | CCTGGTAAATGTAGCCGTCGGCGCTGCAGTTGTGGGAGAGGTTGGTaGGAGGTACCCCTGTCTGGGAGGCGGCGGGAGGCGGCGGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGKCSRRRCSCGRGW*EVPLSGRRREAAGR Trigger: GCGCCCCGCCGCCTCCCGCCGCCTCCCAGACAGGGGTACCTCTCACCAACCTCTCCCACAACTGCAGCGCCGACGGCTACATTTACCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
||
| CDS CCA 90 bp | GTGCAACAGGTGATATCCGACGACAGCCAGAAGTCGCAGACCACCTaGCCTAGTGTCCAGCGTCCAGTGACCGTGTACATGGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VQQVISDDSQKSQTT*PSVQRPVTVYMVLM Trigger: CATCAGCACCATGTACACGGTCACTGGACGCTGGACACTAGGCCAGGTGGTCTGCGACTTCTGGCTGTCGTCGGATATCACCTGTTGCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
||
| CDS CCA 90 bp | ATGGAGGTGACCGAGGATGTGGATCCCGGGGAGTCTGTTATCAACTaGGCTCGGGTCAAGCGCTTGCCGGTCTTGTTGGGTGTCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MEVTEDVDPGESVIN*ARVKRLPVLLGVCF Trigger: GAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTCCCCGGGATCCACATCCTCGGTCACCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS TCA 90 bp | AAATCCGAGAGCGGGCTTCCACATAGATGCGGCCATAGAGGGCGATaGGGAGCAGGGTGGGTAAATAGAAAGCGCCCACCGTGGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: KSESGLPHRCGHRGR*GAGWVNRKRPPWSR Trigger: TCTACTCCACGGTGGGCGCTTTCTATTTACCCACCCTGCTCCTCATCGCCCTCTATGGCCGCATCTATGTGGAAGCCCGCTCTCGGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS TCA 90 bp | GCGCTCCCTAGCGGCCATGAGTTTCTTCTTTTCCAGCAGGGCGTCTaGGACTCGCACTTTGACTTGGTTCACGTACACAGGAGACCCGGA | + |
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Preference number: 5 (lower is better) Translates to: ALPSGHEFLLFQQGV*DSHFDLVHVHRRPG Trigger: TCCGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAAAAGAAGAAACTCATGGCCGCTAGGGAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS GCA 90 bp | TGGATCCCGGGGAGTCTGTTATCAACTGGGCTCGGGTCAAGCGCTTaGCGGTCTTGTTGGGTGTCTGTTTCAAAATCCGAGAGCGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: WIPGSLLSTGLGSSA*RSCWVSVSKSESGL Trigger: AAGCCCGCTCTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTCCCCGGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 90 bp | AGTTTCTTCTTTTCCAGCAGGGCGTCTGAGACTCGCACTTTGACTTaGTTCACGTACACAGGAGACCCGGACTCACTGGGCACGTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: SFFFSSRASETRTLT*FTYTGDPDSLGTSG Trigger: TCCGGACGTGCCCAGTGAGTCCGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAAAAGAAGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 90 bp | AGTCTGTTATCAACTGGGCTCGGGTCAAGCGCTTGCCGGTCTTGTTaGGTGTCTGTTTCAAAATCCGAGAGCGGGCTTCCACATAGATGC | + |
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Preference number: 5 (lower is better) Translates to: SLLSTGLGSSACRSC*VSVSKSESGLPHRC Trigger: GCATCTATGTGGAAGCCCGCTCTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | AGATTTGACCTACCTGTGAAAAGACCCAACTTGGTCCCCAAAGGTCGCTTAGGCGCGATTACAAAGGCGTaGGAGAGCGTGGTGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RFDLPVKRPNLVPKGRLGAITKA*ESVVAK Trigger: CTTGGCCACCACGCTCTCCAACGCCTTTGTAATCGC...GCCTAAGCGACCTTTGGGGACCAAGTTGGGTCTTTTCACAGGTAGGTCAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | AGATTTGACCTACCTGTGAAAAGACCCAACTTGGTCCCCAAAGGTCGCTTAGGCCTCCTCTGCTTTGGCTaGACGCCAGAAGAAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RFDLPVKRPNLVPKGRLGLLCFG*TPEEGW Trigger: CCACCCTTCTTCTGGCGTCAAGCCAAAGCAGAGGAG...GCCTAAGCGACCTTTGGGGACCAAGTTGGGTCTTTTCACAGGTAGGTCAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | AATAGTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGCCGTCGGCGCTGCAGTaGTGGGAGAGGTTGGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: NSIGGIFKISEQGNQLSWPSALQ*WERLVR Trigger: TCTCACCAACCTCTCCCACAACTGCAGCGCCGACGG...CCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATACTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTAGGGTCTTGGTGGCTTaGCGCTCCCTAGCGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: AMLDDDPRSLITTKVCKLRVLVA*RSLAAM Trigger: CATGGCCGCTAGGGAGCGCAAAGCCACCAAGACCCT...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | AATAGTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGCAGTTGTGGGAGAGGTaGGTGAGAGGTACCCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: NSIGGIFKISEQGNQLSWQLWER*VRGTPV Trigger: GACAGGGGTACCTCTCACCAACCTCTCCCACAACTG...CCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATACTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GTGTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGGCTCGGGTCAAGCGCTaGCCGGTCTTGTTGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: VSSLRNKLCLYAIGTAKEARVKR*PVLLGV Trigger: GACACCCAACAAGACCGGCAAGCGCTTGACCCGAGC...CTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTATGATCCCTAGGGTCTaGGTGGCTTTGCGCTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: AMLDDDPRSLITTKVCKLMIPRV*VALRSL Trigger: TAGGGAGCGCAAAGCCACCAAGACCCTAGGGATCAT...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | CTCTTAGGCCCCAAGAAAACGCAGCTACACAAACAGAAGACCAACATATTAACAATGATGGCCGCCCTTTaGGGAGTCCTTTTAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLGPKKTQLHKQKTNILTMMAAL*GVLLAE Trigger: TTCTGCTAAAAGGACTCCCAAAAGGGCGGCCATCAT...TGTTAATATGTTGGTCTTCTGTTTGTGTAGCTGCGTTTTCTTGGGGCCTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTAAGCGCTTGCCGGTCTaGTTGGGTGTCTGTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: AMLDDDPRSLITTKVCKLKRLPV*LGVCFK Trigger: TTTGAAACAGACACCCAACAAGACCGGCAAGCGCTT...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GCAATGCTGGACGATGATCCTAGATCTCTTATCACTACAAAGGTTTGCAAGCTTGACTCGCACTTTGACTaGGTTCACGTACACAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: AMLDDDPRSLITTKVCKLDSHFD*VHVHRR Trigger: TCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTC...AAGCTTGCAAACCTTTGTAGTGATAAGAGATCTAGGATCATCGTCCAGCATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACTCTGAGACTCGCACTTaGACTTGGTTCACGTACACA | + |
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Preference number: 5 (lower is better) Translates to: VLGAFSRFLNRETSSLGYSETRT*TWFTYT Trigger: TGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGA...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGTTAACTCTTCAAGGTTGCTCTGTGCCGTCCAAGCCACATTCAGTGTTTCAGTTTGTGGAACGCTaGTTTGAAGTCCTCATTGGA | + |
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Preference number: 5 (lower is better) Translates to: LLLTLQGCSVPSKPHSVFQFVER*FEVLIG Trigger: TCCAATGAGGACTTCAAACAAGCGTTCCACAAACTG...AAACACTGAATGTGGCTTGGACGGCACAGAGCAACCTTGAAGAGTTAACAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GTATTGGGGGCATTTTCAAGATTTCTGAACAGGGAAACCAGCTCTCTTGGTTACTTGTGGAACGCTTGTTaGAAGTCCTCATTGGACATG | + |
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Preference number: 5 (lower is better) Translates to: VLGAFSRFLNRETSSLGYLWNAC*KSSLDM Trigger: CATGTCCAATGAGGACTTCAAACAAGCGTTCCACAA...GTAACCAAGAGAGCTGGTTTCCCTGTTCAGAAATCTTGAAAATGCCCCCAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS-3UTR CAA 90 bp | GTGTCCAGTTTAAGAAACAAACTATGCTTATATGCAATAGGAACTGCAAAGGAGCGCTTGCCGGTCTTGTaGGGTGTCTGTTTCAAAATC | + |
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Preference number: 5 (lower is better) Translates to: VSSLRNKLCLYAIGTAKERLPVL*GVCFKI Trigger: GATTTTGAAACAGACACCCAACAAGACCGGCAAGCG...CTCCTTTGCAGTTCCTATTGCATATAAGCATAGTTTGTTTCTTAAACTGGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183482.2 |
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| CDS TCA 72 bp | TGTAGCCGTCGGCGCTGCAGTTGTGGGAGAGGTTGGTaGGAGGTACCCCTGTCTGGGAGGCGGCGGGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: CSRRRCSCGRGW*EVPLSGRRREA Trigger: CGCCTCCCGCCGCCTCCCAGACAGGGGTACCTCTCACCAACCTCTCCCACAACTGCAGCGCCGACGGCTACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 72 bp | ACCGAGGATGTGGATCCCGGGGAGTCTGTTATCAACTaGGCTCGGGTCAAGCGCTTGCCGGTCTTGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TEDVDPGESVIN*ARVKRLPVLLG Trigger: ACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTCCCCGGGATCCACATCCTCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 90 bp | GTGGATCCCGGGGAGTCTGTTATCAACTGGGCTCGGGTCAAGCGCTaGCCGGTCTTGTTGGGTGTCTGTTTCAAAATCCGAGAGCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VDPGESVINWARVKR*PVLLGVCFKIRERA Trigger: AGCCCGCTCTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTCCCCGGGATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 72 bp | ACAAAGCAACCAGCAGGACTTTCCAGGGCAGGGCGATaGAGTCCTGGTAAATGTAGCCGTCGGCGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TKQPAGLSRAGR*SPGKCSRRRCS Trigger: ACTGCAGCGCCGACGGCTACATTTACCAGGACTCCATCGCCCTGCCCTGGAAAGTCCTGCTGGTTGCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 72 bp | GTGATATCCGACGACAGCCAGAAGTCGCAGACCACCTaGCCTAGTGTCCAGCGTCCAGTGACCGTGTACATG | + |
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Preference number: 6 (lower is better) Translates to: VISDDSQKSQTT*PSVQRPVTVYM Trigger: CATGTACACGGTCACTGGACGCTGGACACTAGGCCAGGTGGTCTGCGACTTCTGGCTGTCGTCGGATATCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 90 bp | GTGTGTAGCTTCCGGGTCCGATACACCGTAGCGATTACAAAGGCGTaGGAGAGCGTGGTGGCCAAGGTGATGAGCGCCAACAAAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: VCSFRVRYTVAITKA*ESVVAKVMSANKAT Trigger: GGTTGCTTTGTTGGCGCTCATCACCTTGGCCACCACGCTCTCCAACGCCTTTGTAATCGCTACGGTGTATCGGACCCGGAAGCTACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 72 bp | TCAACTGGGCTCGGGTCAAGCGCTTGCCGGTCTTGTTaGGTGTCTGTTTCAAAATCCGAGAGCGGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: STGLGSSACRSC*VSVSKSESGLP Trigger: TGGAAGCCCGCTCTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 72 bp | TTTTCCAGCAGGGCGTCTGAGACTCGCACTTTGACTTaGTTCACGTACACAGGAGACCCGGACTCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: FSSRASETRTLT*FTYTGDPDSLG Trigger: GCCCAGTGAGTCCGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 72 bp | ATCAACTGGGCTCGGGTCAAGCGCTTGCCGGTCTTGTaGGGTGTCTGTTTCAAAATCCGAGAGCGGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: INWARVKRLPVL*GVCFKIRERAS Trigger: GGAAGCCCGCTCTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 90 bp | GAGATGGAGAAGACCCACACCAGCACGATCATGATGGCCGCCCTTTaGGGAGTCCTTTTAGCAGAATACTCCACCGCATCGGTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: EMEKTHTSTIMMAAL*GVLLAEYSTASVMA Trigger: GGCCATCACCGATGCGGTGGAGTATTCTGCTAAAAGGACTCCCAAAAGGGCGGCCATCATGATCGTGCTGGTGTGGGTCTTCTCCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 90 bp | GCCATGAGTTTCTTCTTTTCCAGCAGGGCGTCTGAGACTCGCACTTaGACTTGGTTCACGTACACAGGAGACCCGGACTCACTGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: AMSFFFSSRASETRT*TWFTYTGDPDSLGT Trigger: CGTGCCCAGTGAGTCCGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAAAAGAAGAAACTCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 72 bp | GTTATCAACTGGGCTCGGGTCAAGCGCTTGCCGGTCTaGTTGGGTGTCTGTTTCAAAATCCGAGAGCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VINWARVKRLPV*LGVCFKIRERA Trigger: AGCCCGCTCTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS TCA 72 bp | TCTTCTTTTCCAGCAGGGCGTCTGAGACTCGCACTTTaGCTTGGTTCACGTACACAGGAGACCCGGACTCAC | + |
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Preference number: 6 (lower is better) Translates to: SSFPAGRLRLAL*LGSRTQETRTH Trigger: GTGAGTCCGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAAAAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS GCA 72 bp | GGGAGTCTGTTATCAACTGGGCTCGGGTCAAGCGCTTaGCGGTCTTGTTGGGTGTCTGTTTCAAAATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GSLLSTGLGSSA*RSCWVSVSKSE Trigger: CTCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CCA 72 bp | CTCCTCCTCTGCTTTGGCTTGACGCCAGAAGAAGGGTaGCAACGAAATAGAGATGGAGAAGACCCACACCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLCFGLTPEEG*QRNRDGEDPHQ Trigger: CTGGTGTGGGTCTTCTCCATCTCTATTTCGTTGCCACCCTTCTTCTGGCGTCAAGCCAAAGCAGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 72 bp | AAGACCCACACCAGCACGATCATGATGGCCGCCCTTTaGGGAGTCCTTTTAGCAGAATACTCCACCGCATCG | + |
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Preference number: 6 (lower is better) Translates to: KTHTSTIMMAAL*GVLLAEYSTAS Trigger: CGATGCGGTGGAGTATTCTGCTAAAAGGACTCCCAAAAGGGCGGCCATCATGATCGTGCTGGTGTGGGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 72 bp | GGGGAGTCTGTTATCAACTGGGCTCGGGTCAAGCGCTaGCCGGTCTTGTTGGGTGTCTGTTTCAAAATCCGA | + |
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Preference number: 6 (lower is better) Translates to: GESVINWARVKR*PVLLGVCFKIR Trigger: TCGGATTTTGAAACAGACACCCAACAAGACCGGCAAGCGCTTGACCCGAGCCCAGTTGATAACAGACTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 72 bp | TTCTTCTTTTCCAGCAGGGCGTCTGAGACTCGCACTTaGACTTGGTTCACGTACACAGGAGACCCGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: FFFSSRASETRT*TWFTYTGDPDS Trigger: TGAGTCCGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCAGACGCCCTGCTGGAAAAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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| CDS CAA 72 bp | ACCTGCGCACTTAAAGCGTATCAGTTTGTGGAACGCTaGTTTGAAGTCCTCATTGGACATGGTGTAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: TCALKAYQFVER*FEVLIGHGVDD Trigger: ATCATCTACACCATGTCCAATGAGGACTTCAAACAAGCGTTCCACAAACTGATACGCTTTAAGTGCGCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051005.5 ENSMUST00000183482.2 |
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