Pregenerated sensors for HTATIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039745Ensembl transcript IDs: ENSMUST00000085272.7, ENSMUST00000207895.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGAGACGGTGGCCCTGGAGGAGTaGTTCAAAGCTGGCCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: HSVHSATCSPTAPCRQETVALEE*FKAGLT Trigger: TGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCAC...CGTCTCCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCAAGTAGTGCCATTTTCTaGTGGAGCCGCTTGGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLRWPWRSASKLALHPKASSAIF*WSRLAK Trigger: CTTAGCCAAGCGGCTCCATCAGAAAATGGCACTACT...TGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCAGTAGTGCCATTTTCTaGTGGAGCCGCTTGGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ESRHSVHSATCSPTAPCRSSAIF*WSRLAK Trigger: CTTAGCCAAGCGGCTCCATCAGAAAATGGCACTACT...GCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCTTTGGTGACAGGCACTaGGGTTTTCACGAATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ESRHSVHSATCSPTAPCRFGDRH*GFHECP Trigger: AGGACATTCGTGAAAACCTCAGTGCCTGTCACCAAA...GCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTAGTGCCATTTTCTGATGGAGCCGCTTGGCTAAGGAGAAGCACACCACAATTTGGTGACAGGCACTaGGGTTTTCACGAATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVVPFSDGAAWLRRSTPQFGDRH*GFHECP Trigger: AGGACATTCGTGAAAACCTCAGTGCCTGTCACCAAA...TTGTGGTGTGCTTCTCCTTAGCCAAGCGGCTCCATCAGAAAATGGCACTACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATACAGAAGCTTGTCTTACAGCTTCTGTGCTGACAGAGAATCAAGGCACAGTGTGGCCCTGGAGGAGTaGTTCAAAGCTGGCCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: KYRSLSYSFCADRESRHSVALEE*FKAGLT Trigger: TGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCAC...ACTGTGCCTTGATTCTCTGTCAGCACAGAAGCTGTAAGACAAGCTTCTGTATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR GCA 72 bp | CAGGAGACGAGACTGCCTGTAGTGCTAGGGCCCCTCTaGTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QETRLPVVLGPL*SGGPGGVLQSW Trigger: CCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAGCACTACAGGCAGTCTCGTCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR CCA 72 bp | CTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTaGCCTTACACCCAAAGGCACCGGGACCTCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCSGGPGGVLQS*PYTQRHRDLQR Trigger: TCTCTGGAGGTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR CCA 72 bp | GCCTGTAGTGCTAGGGCCCCTCTGCTCAGGTGGCCCTaGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACSARAPLLRWP*RSASKLALHPK Trigger: CTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAGCACTACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR CCA 72 bp | GAGACTGCCTGTAGTGCTAGGGCCCCTCTGCTCAGGTaGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: ETACSARAPLLR*PWRSASKLALH Trigger: GTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAGCACTACAGGCAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGGCCCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACCCCCAAATGACTGATTaGGTGACAGGCACTGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGPLCSGGPGGVLQSWPYPQMTD*VTGTEV Trigger: AACCTCAGTGCCTGTCACCAAATCAGTCATTTGGGG...GTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR TCA 72 bp | GGCTCTCAACAACTGACGTGGAGTAGTGCCATTTTCTaGTGGAGCCGCTTGGCTAAGGAGAAGCACACCACA | + |
|
Preference number: 3 (lower is better) Translates to: GSQQLTWSSAIF*WSRLAKEKHTT Trigger: TGTGGTGTGCTTCTCCTTAGCCAAGCGGCTCCATCAGAAAATGGCACTACTCCACGTCAGTTGTTGAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGACAGAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCCCCAAATGACTGATTaGGTGACAGGCACTGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLTENQGTVFTQLHAAQQPQMTD*VTGTEV Trigger: AACCTCAGTGCCTGTCACCAAATCAGTCATTTGGGG...CTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTCTGTCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR TCA 72 bp | CTGGATGATTACATGAGCAACGGGGCTCTCAACAACTaGCGTGGAGTAGTGCCATTTTCTGATGGAGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LDDYMSNGALNN*RGVVPFSDGAA Trigger: AGCGGCTCCATCAGAAAATGGCACTACTCCACGTCAGTTGTTGAGAGCCCCGTTGCTCATGTAATCATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| 3UTR TCA 72 bp | GGTGAAATACAGAAGCTTGTCTTACAGCTTCTGTGCTaGCAGAGAATCAAGGCACAGTGTTCACTCAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GEIQKLVLQLLC*QRIKAQCSLSY Trigger: GTAGCTGAGTGAACACTGTGCCTTGATTCTCTGTCAGCACAGAAGCTGTAAGACAAGCTTCTGTATTTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGGCCCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTGCACAGCGTACCCACTaGCCCAAGAGTCTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGPLCSGGPGGVLQSWPAQRTH*PKSLAE Trigger: CTCTGCCAGACTCTTGGGCCAGTGGGTACGCTGTGC...AGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAACTTCCTTGTCCGCCATaGTGGGAGCAGCCCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PSAQVALEECFKAGLTPKLPCPP*WEQPRT Trigger: GGTCCGGGGCTGCTCCCAGCATGGCGGACAAGGAAG...TTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCCTTGTCCGCCATGCTaGGAGCAGCCCCGGACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESRHSVHSATCSPTAPCRPCPPC*EQPRTP Trigger: AGGGGTCCGGGGCTGCTCCCAGCATGGCGGACAAGG...GCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCGGGACCCTTGCTTCTGGTGGTaGCCAGGCAACAGAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGPGGVLQSWPYTQRHRDPCFWW*PGNRIQ Trigger: TTGGATTCTGTTGCCTGGGCACCACCAGAAGCAAGG...GTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCGGGACCCCATTTGTCCGCTGCTaGGACTCACCAGGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VALEECFKAGLTPKGTGTPFVRC*DSPGCS Trigger: TGAACAACCTGGTGAGTCCCAGCAGCGGACAAATGG...GGTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTGCTAGGGCCCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCATTTGTCCGCTGCTaGGACTCACCAGGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVLGPLCSGGPGGVLQSWPFVRC*DSPGCS Trigger: TGAACAACCTGGTGAGTCCCAGCAGCGGACAAATGG...CCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAGCACTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCATGTTTGCACCCTCCTaGTTTCGCCAGCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQVALEECFKAGLTPKGTMFAPS*FRQLCR Trigger: TCTGCAGAGCTGGCGAAAGCAGGAGGGTGCAAACAT...GGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGACCCTCGTCCCCACTCTaGAACAGTAGCATTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQCSLSYMQPNSTVPPGPSSPL*NSSIEA Trigger: GGCTTCAATGCTACTGTTGCAGAGTGGGGACGAGGG...TCCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAACAGCCTTGCTTCTGGTaGTGCCCAGGCAACAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSAQVALEECFKAGLTPKQPCFW*CPGNRI Trigger: GATTCTGTTGCCTGGGCACCACCAGAAGCAAGGCTG...TTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGCAGCCTTGCTTCTGGTaGTGCCCAGGCAACAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SRHSVHSATCSPTAPCRQQPCFW*CPGNRI Trigger: GATTCTGTTGCCTGGGCACCACCAGAAGCAAGGCTG...CTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCGGGACGCTTCCTCCGACCAATaGGCGTTACTTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GGPGGVLQSWPYTQRHRDASSDQ*ALLWKT Trigger: TGTTTTCCAAAGTAACGCTCATTGGTCGGAGGAAGC...GTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCCCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACTGCTTTCGCCAGCTCTaGAGACTTGAGCACATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLCSGGPGGVLQSWPYCFRQL*RLEHII Trigger: GATTATGTGCTCAAGTCTGCAGAGCTGGCGAAAGCA...GTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGCTGTCTTTCCCCAGGTaGAGGATGGCCTTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGTVFTQLHAAQQHRAARLSFPR*RMALFS Trigger: GGAAAATAAGGCCATCCTCCACCTGGGGAAAGACAG...CCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGAGACGGCTTCCTCCGACCAATaGGCGTTACTTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSVHSATCSPTAPCRQETASSDQ*ALLWKT Trigger: TGTTTTCCAAAGTAACGCTCATTGGTCGGAGGAAGC...CGTCTCCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGACCTTTAAAAGTACTTTaGCAGTTTCCCCGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQCSLSYMQPNSTVPPGPLKVL*QFPRWR Trigger: GCGCCAGCGGGGAAACTGGCAAAGTACTTTTAAAGG...TCCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTGACAGAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGGCACAGCGTACCCACTaGCCCAAGAGTCTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTENQGTVFTQLHAAQQAQRTH*PKSLAE Trigger: CTCTGCCAGACTCTTGGGCCAGTGGGTACGCTGTGC...CTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTCTGTCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | CACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGAGACGTCCCCAGGTGGAGGATaGCCTTATTTTCCAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSVHSATCSPTAPCRQETSPGGG*PYFPEV Trigger: AACTTCTGGAAAATAAGGCCATCCTCCACCTGGGGA...CGTCTCCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCCCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACATTTATTCTGCATCTTaGAGTCTTCCCGAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGPLCSGGPGGVLQSWPYIYSAS*SLPEAS Trigger: CGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAAT...GTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGGCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | GAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCCTTTAAAAGTACTTTaGCAGTTTCCCCGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESRHSVHSATCSPTAPCRPLKVL*QFPRWR Trigger: GCGCCAGCGGGGAAACTGGCAAAGTACTTTTAAAGG...GCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCATGCTTTCGCCAGCTCTaGAGACTTGAGCACATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLRWPWRSASKLALHPKACFRQL*RLEHII Trigger: GATTATGTGCTCAAGTCTGCAGAGCTGGCGAAAGCA...TGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGTGCCATTTTCTGATGGAGCCGCTTGGCTAAGGAGAAGCACACCACAACTCCAGCCTTGCTTCTaGTGGTGCCCAGGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVVPFSDGAAWLRRSTPQLQPCF*WCPGNR Trigger: TCTGTTGCCTGGGCACCACCAGAAGCAAGGCTGGAG...TTGTGGTGTGCTTCTCCTTAGCCAAGCGGCTCCATCAGAAAATGGCACTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTGACAGAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCTCCAGCCTTGCTTCTaGTGGTGCCCAGGCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTENQGTVFTQLHAAQQLQPCF*WCPGNR Trigger: TCTGTTGCCTGGGCACCACCAGAAGCAAGGCTGGAG...CTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTCTGTCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCATCCCCAGGTGGAGGATaGCCTTATTTTCCAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRWPWRSASKLALHPKASPGGG*PYFPEV Trigger: AACTTCTGGAAAATAAGGCCATCCTCCACCTGGGGA...TGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGATTTATTCTGCATCTTaGAGTCTTCCCGAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGTVFTQLHAAQQHRAARIYSAS*SLPEAS Trigger: CGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAAT...CCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR TCA 90 bp | GAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCTGGAGGACAGCAAGTTaGAATGTTTGCACCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENQGTVFTQLHAAQQHRAWRTAS*NVCTLL Trigger: CAGGAGGGTGCAAACATTTCAACTTGCTGTCCTCCA...GGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCACTGGCCCAAGAGTCTaGCAGAGAGCCGAAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ENQGTVFTQLHAAQQHRATGPRV*QRAEEF Trigger: AAATTCTTCGGCTCTCTGCCAGACTCTTGGGCCAGT...GGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCCTGTCTTTCCCCAGGTaGAGGATGGCCTTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENQGTVFTQLHAAQQHRALSFPR*RMALFS Trigger: GGAAAATAAGGCCATCCTCCACCTGGGGAAAGACAG...GGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTCTGCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAAGACGGATTTATTCTaGATCTTGAAGTCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLCSGGPGGVLQSWPYTQKTDLF*ILKSSR Trigger: TCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTT...TTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGCAGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGACAGAGAATCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGATGTTTGCACCCTCCTaGTTTCGCCAGCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTENQGTVFTQLHAAQQMFAPS*FRQLCR Trigger: TCTGCAGAGCTGGCGAAAGCAGGAGGGTGCAAACAT...CTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGATTCTCTGTCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR GCA 90 bp | AAATACAGAAGCTTGTCTTACAGCTTCTGTGCTGACAGAGAATCAAGGCACAGTAAGACGGATTTATTCTaGATCTTGAAGTCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KYRSLSYSFCADRESRHSKTDLF*ILKSSR Trigger: TCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTT...ACTGTGCCTTGATTCTCTGTCAGCACAGAAGCTGTAAGACAAGCTTCTGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCGGGACCCCTTCCGCTCCAGCCTaGCTTCTGGTGGTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VALEECFKAGLTPKGTGTPSAPA*LLVVPR Trigger: CCTGGGCACCACCAGAAGCAAGGCTGGAGCGGAAGG...GGTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CCA 90 bp | AACCACCGTCACCACAGGCACAGCGTACCCACTGGCCCAAGAGTCTaGCAGAGAGCCGAAGAATTTCCTAGCCAGCCATTCGCCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: NHRHHRHSVPTGPRV*QRAEEFPSQPFAWT Trigger: CGTCCAGGCGAATGGCTGGCTAGGAAATTCTTCGGCTCTCTGCCAGACTCTTGGGCCAGTGGGTACGCTGTGCCTGTGGTGACGGTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCGGGACCCTGGAGGACAGCAAGTaGAAATGTTTGCACCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VALEECFKAGLTPKGTGTLEDSK*KCLHPP Trigger: AGGAGGGTGCAAACATTTCAACTTGCTGTCCTCCAG...GGTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCGGGACCTGGAGGACAGCAAGTaGAAATGTTTGCACCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGPGGVLQSWPYTQRHRDLEDSK*KCLHPP Trigger: AGGAGGGTGCAAACATTTCAACTTGCTGTCCTCCAG...GTCCCGGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGTGGCCCTGGAGGAGTGCTTCAAAGCTGGCCTTACACCCAAAGGCACCAGCAAGTTGAAATGTTaGCACCCTCCTGCTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQVALEECFKAGLTPKGTSKLKC*HPPAFA Trigger: GGCGAAAGCAGGAGGGTGCAAACATTTCAACTTGCT...GGTGCCTTTGGGTGTAAGGCCAGCTTTGAAGCACTCCTCCAGGGCCACCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGGACCAATGAGCGTTACTTaGGAAAACAGGTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KAQCSLSYMQPNSTVPPGPMSVT*ENRFCP Trigger: GGGACAGAACCTGTTTTCCAAAGTAACGCTCATTGG...TCCTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCACAGTGTTCACTCAGCTACATGCAGCCCAACAGCACCGTGCCGCCAGCCAATGAGCGTTACTTaGGAAAACAGGTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRHSVHSATCSPTAPCRQPMSVT*ENRFCP Trigger: GGGACAGAACCTGTTTTCCAAAGTAACGCTCATTGG...CTGGCGGCACGGTGCTGTTGGGCTGCATGTAGCTGAGTGAACACTGTGCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS-3UTR CAA 90 bp | AAATACAGAAGCTTGTCTTACAGCTTCTGTGCTGACAGAGAATCAAGGCACAGTCCTTCCGCTCCAGCCTaGCTTCTGGTGGTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KYRSLSYSFCADRESRHSPSAPA*LLVVPR Trigger: CCTGGGCACCACCAGAAGCAAGGCTGGAGCGGAAGG...ACTGTGCCTTGATTCTCTGTCAGCACAGAAGCTGTAAGACAAGCTTCTGTATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS GCA 90 bp | TTGCCAGTTTCCCCGCTGGCGCCCAAAATAAAGACGGATTTATTCTaGATCTTGAAGTCTTCCCGAAGCTTCGGCAGTGCTTCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPVSPLAPKIKTDLF*ILKSSRSFGSASLS Trigger: GGACAAGGAAGCACTGCCGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTTTATTTTGGGCGCCAGCGGGGAAACTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS GCA 90 bp | GGACAGCAAGTTGAAATGTTTGCACCCTCCTGCTTTCGCCAGCTCTaGAGACTTGAGCACATAATCTCGGTCAACACGAACAAACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQQVEMFAPSCFRQL*RLEHIISVNTNKPF Trigger: GAAGGGTTTGTTCGTGTTGACCGAGATTATGTGCTCAAGTCTGCAGAGCTGGCGAAAGCAGGAGGGTGCAAACATTTCAACTTGCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 72 bp | ATCTTGAAGTCTTCCCGAAGCTTCGGCAGTGCTTCCTaGTCCGCCATGCTGGGAGCAGCCCCGGACCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ILKSSRSFGSAS*SAMLGAAPDPS Trigger: CGAGGGGTCCGGGGCTGCTCCCAGCATGGCGGACAAGGAAGCACTGCCGAAGCTTCGGGAAGACTTCAAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207895.2 |
||
| CDS GCA 72 bp | CTCGGTCAACACGAACAAACCCTTCCGCTCCAGCCTTaGTTCTGGTGGTGCCCAGGCAACAGAATCCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: LGQHEQTLPLQP*FWWCPGNRIQH Trigger: ATGTTGGATTCTGTTGCCTGGGCACCACCAGAAGCAAGGCTGGAGCGGAAGGGTTTGTTCGTGTTGACCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 72 bp | AGAAGTTCCATTTGTCCGCTGCTGGGACTCACCAGGTaGTTCAGCATCGCTCTAACCACCGTCACCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSICPLLGLTR*FSIALTTVTTG Trigger: GCCTGTGGTGACGGTGGTTAGAGCGATGCTGAACAACCTGGTGAGTCCCAGCAGCGGACAAATGGAACTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 90 bp | TTATTTTCCAGAAGTTCCATTTGTCCGCTGCTGGGACTCACCAGGTaGTTCAGCATCGCTCTAACCACCGTCACCACAGGCACAGCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LFSRSSICPLLGLTR*FSIALTTVTTGTAY Trigger: GTACGCTGTGCCTGTGGTGACGGTGGTTAGAGCGATGCTGAACAACCTGGTGAGTCCCAGCAGCGGACAAATGGAACTTCTGGAAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 90 bp | GTCTTTCCCCAGGTGGAGGATGGCCTTATTTTCCAGAAGTTCCATTaGTCCGCTGCTGGGACTCACCAGGTTGTTCAGCATCGCTCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: VFPQVEDGLIFQKFH*SAAGTHQVVQHRSN Trigger: GTTAGAGCGATGCTGAACAACCTGGTGAGTCCCAGCAGCGGACAAATGGAACTTCTGGAAAATAAGGCCATCCTCCACCTGGGGAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 90 bp | GTTTCCCCGCTGGCGCCCAAAATAAAGACGGATTTATTCTGCATCTaGAAGTCTTCCCGAAGCTTCGGCAGTGCTTCCTTGTCCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VSPLAPKIKTDLFCI*KSSRSFGSASLSAM Trigger: CATGGCGGACAAGGAAGCACTGCCGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTTTATTTTGGGCGCCAGCGGGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207895.2 |
||
| CDS TCA 72 bp | GTTTGCACCCTCCTGCTTTCGCCAGCTCTGCAGACTTaGGCACATAATCTCGGTCAACACGAACAAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VCTLLLSPALQT*AHNLGQHEQTL Trigger: AAGGGTTTGTTCGTGTTGACCGAGATTATGTGCTCAAGTCTGCAGAGCTGGCGAAAGCAGGAGGGTGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS GCA 72 bp | CCTGGAGGACAGCAAGTTGAAATGTTTGCACCCTCCTaGTTTCGCCAGCTCTGCAGACTTGAGCACATAATC | + |
|
Preference number: 6 (lower is better) Translates to: PGGQQVEMFAPS*FRQLCRLEHII Trigger: GATTATGTGCTCAAGTCTGCAGAGCTGGCGAAAGCAGGAGGGTGCAAACATTTCAACTTGCTGTCCTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 72 bp | CAGGTGGAGGATGGCCTTATTTTCCAGAAGTTCCATTaGTCCGCTGCTGGGACTCACCAGGTTGTTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QVEDGLIFQKFH*SAAGTHQVVQH Trigger: ATGCTGAACAACCTGGTGAGTCCCAGCAGCGGACAAATGGAACTTCTGGAAAATAAGGCCATCCTCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 90 bp | CTTGCTTCTGGTGGTGCCCAGGCAACAGAATCCAACATCATGACCTaGAAAGGCAGAAGCATAGACATCCAGCTTCTCAAAGTCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LASGGAQATESNIMT*KGRSIDIQLLKVHH Trigger: GTGGTGGACTTTGAGAAGCTGGATGTCTATGCTTCTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGCACCACCAGAAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS GCA 72 bp | GTTGAAATGTTTGCACCCTCCTGCTTTCGCCAGCTCTaGAGACTTGAGCACATAATCTCGGTCAACACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VEMFAPSCFRQL*RLEHIISVNTN Trigger: GTTCGTGTTGACCGAGATTATGTGCTCAAGTCTGCAGAGCTGGCGAAAGCAGGAGGGTGCAAACATTTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 72 bp | CTGGCGCCCAAAATAAAGACGGATTTATTCTGCATCTaGAAGTCTTCCCGAAGCTTCGGCAGTGCTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPKIKTDLFCI*KSSRSFGSASL Trigger: CAAGGAAGCACTGCCGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTTTATTTTGGGCGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 72 bp | GGTGGTGCCCAGGCAACAGAATCCAACATCATGACCTaGAAAGGCAGAAGCATAGACATCCAGCTTCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GGAQATESNIMT*KGRSIDIQLLK Trigger: TTTGAGAAGCTGGATGTCTATGCTTCTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGCACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||
| CDS CAA 72 bp | TCGAAGGTGAGCTTCCTCCGACCAATGAGCGTTACTTaGGAAAACAGGTTCTGTCCCAGGATTTCCTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SKVSFLRPMSVT*ENRFCPRISFK Trigger: TTTAAAGGAAATCCTGGGACAGAACCTGTTTTCCAAAGTAACGCTCATTGGTCGGAGGAAGCTCACCTTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085272.7 ENSMUST00000207895.2 |
||