RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSPG2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028763

Ensembl transcript IDs: ENSMUST00000030547.15, ENSMUST00000171332.2, ENSMUST00000238544.2

Found 1247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTCCCCTTGTCCTGCCCACCAGCCTCGGGGCTCTGCCCACGAATaGGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGG +
Preference number: 1 (lower is better)
Translates to: QSPCPAHQPRGSAHE*VGVGAPTLQSSPGW
Trigger: CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGACAAGGGGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp CCCCTTGTCCTGCCCACCAGCCTCGGGGCTCTGCCCACGAATGCGTaGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGC +
Preference number: 1 (lower is better)
Translates to: PLVLPTSLGALPTNA*ELAHPPSSPAQGGS
Trigger: GCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGACAAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp TCCTGCCCACCAGCCTCGGGGCTCTGCCCACGAATGCGTGGGAGTTaGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAG +
Preference number: 1 (lower is better)
Translates to: SCPPASGLCPRMRGS*RTHPPVQPRVVAAK
Trigger: CTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR GCA 90 bp AAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAGCCTCGGGGCTCTaGCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAG +
Preference number: 1 (lower is better)
Translates to: KPLPVPLSCPPASGL*PRMRGSWRTHPPVQ
Trigger: CTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGACAAGGGGACTGGAAGAGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp AGGAGGGCTGGGTGGGAGGGGACACTGCCAAGGACATGGGACCTCTaGCTAGGTGGGTGTGGAGGAGGCTGGGATGGTATGTGGTCGGTG +
Preference number: 1 (lower is better)
Translates to: RRAGWEGTLPRTWDL*LGGCGGGWDGMWSV
Trigger: CACCGACCACATACCATCCCAGCCTCCTCCACACCCACCTAGCCAGAGGTCCCATGTCCTTGGCAGTGTCCCCTCCCACCCAGCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp TGCAGGTGGAGGAGGGCTGGGTGGGAGGGGACACTGCCAAGGACATaGGACCTCTGGCTAGGTGGGTGTGGAGGAGGCTGGGATGGTATG +
Preference number: 1 (lower is better)
Translates to: CRWRRAGWEGTLPRT*DLWLGGCGGGWDGM
Trigger: CATACCATCCCAGCCTCCTCCACACCCACCTAGCCAGAGGTCCCATGTCCTTGGCAGTGTCCCCTCCCACCCAGCCCTCCTCCACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp GCGCTCACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTaGGTGGCCCAGCCTGACGCTGAAGCAGGGAAAGGGATGGGAACA +
Preference number: 1 (lower is better)
Translates to: ALTAMRTVRTHGLLK*VAQPDAEAGKGMGT
Trigger: TGTTCCCATCCCTTTCCCTGCTTCAGCGTCAGGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp GGGGCAGTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATaGCCACACCCCCTCGTTCAGTTTGACAGTGAGGCACCAGGTGGT +
Preference number: 1 (lower is better)
Translates to: GAVSCLLLPEQWLRP*PHPLVQFDSEAPGG
Trigger: ACCACCTGGTGCCTCACTGTCAAACTGAACGAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCACTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp TGGGTGGGAGGGGACACTGCCAAGGACATGGGACCTCTGGCTAGGTaGGTGTGGAGGAGGCTGGGATGGTATGTGGTCGGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: WVGGDTAKDMGPLAR*VWRRLGWYVVGVCV
Trigger: CACACACACACCGACCACATACCATCCCAGCCTCCTCCACACCCACCTAGCCAGAGGTCCCATGTCCTTGGCAGTGTCCCCTCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR GCA 90 bp CCACACCCCCTCGTTCAGTTTGACAGTGAGGCACCAGGTGGTAACTaGGCTCACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAA +
Preference number: 1 (lower is better)
Translates to: PHPLVQFDSEAPGGN*AHSNEDCPHARPAE
Trigger: TTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTGAGCGCAGTTACCACCTGGTGCCTCACTGTCAAACTGAACGAGGGGGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTaGCCTTGCCTCAGTCTCTTACAAAAAGTCATAATAATATTAATA +
Preference number: 1 (lower is better)
Translates to: AHPPSSPAQGGSSEA*PCLSLLQKVIIILI
Trigger: TATTAATATTATTATGACTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR GCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCACTGTCAGGCTGGGTaGTGCCCAGGAGTCCGTGGG +
Preference number: 2 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAHCQAG*CPGVRG
Trigger: CCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CAA 90 bp ACTCCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTaGTCCTGCCCACCAGCCTCGGGGCTCTGCCCACGAATGCGTGGG +
Preference number: 2 (lower is better)
Translates to: TPSSGSLLRKPLPVP*SCPPASGLCPRMRG
Trigger: CCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCTCCCTTGCAGCTCCTaGGGGCAGAGCCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRLPCSS*GQSPGL
Trigger: CAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCAGTGGCTCAGGCCATaGCCACACCCCCTCGTTCAG +
Preference number: 2 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSQWLRP*PHPLVQ
Trigger: CTGAACGAGGGGGTGTGGCCATGGCCTGAGCCACTG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGGTGCTCCTGATCCCTaGTCCCCCACGCCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKGAPDP*SPTPWA
Trigger: GGCCCAGGGCGTGGGGGAGCAGGGATCAGGAGCACC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGGACCTCTGGCTAGGTaGGTGTGGAGGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCGPLAR*VWRRLG
Trigger: TCCCAGCCTCCTCCACACCCACCTAGCCAGAGGTCC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CAA 90 bp GTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTaGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: VGPHCWALPSDSGKE*VSLAAPEGRALGCV
Trigger: CACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGTTCCCTTCCCAAGCTaGGGTCTCAGCTGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRVPFPS*GLSCLH
Trigger: GTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAAC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGTGGTGGGACCTCATTaGTGGGCTCTGCCTAGCGAT +
Preference number: 2 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRVVGPH*WALPSD
Trigger: ATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTGGAGGAGGCTGGGATaGTATGTGGTCGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSWRRLG*YVVGVC
Trigger: ACACACACCGACCACATACCATCCCAGCCTCCTCCA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGTGTGGCCTGGTGTGGTaGGACCTCATTGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRCGLVW*DLIAGL
Trigger: GAGCCCAGCAATGAGGTCCCACCACACCAGGCCACA...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CAA 90 bp TCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGTTCAGTTaGACAGTGAGGCACCAGGTGGTAACTGCGCTCACAGCAATGAGG +
Preference number: 2 (lower is better)
Translates to: SQNSGSGHGHTPSFS*TVRHQVVTALTAMR
Trigger: CCTCATTGCTGTGAGCGCAGTTACCACCTGGTGCCTCACTGTCAAACTGAACGAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR TCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAGTCACGATGCCTaGCTCCAAGTTCCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASTSHDA*LQVPGA
Trigger: GGCTCCCGGAACTTGGAGTCAGGCATCGTGACTGGT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTGGAGGAGGCTGGGATaGTATGTGGTCGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCWRRLG*YVVGVC
Trigger: ACACACACCGACCACATACCATCCCAGCCTCCTCCA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGTGGCCTGGTGTGGTaGGACCTCATTGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASCGLVW*DLIAGL
Trigger: GAGCCCAGCAATGAGGTCCCACCACACCAGGCCACA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCTGGCTAGGTGGGTGTaGAGGAGGCTGGGATGGTAT +
Preference number: 2 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSLARWV*RRLGWY
Trigger: ATACCATCCCAGCCTCCTCCACACCCACCTAGCCAG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCACACTGCCAAGGACATaGGACCTCTGGCTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSTLPRT*DLWLGG
Trigger: CCCACCTAGCCAGAGGTCCCATGTCCTTGGCAGTGT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGCACCAGGTGGTAACTaGGCTCACAGCAATGAGGAC +
Preference number: 2 (lower is better)
Translates to: VVGPHCWALPSDSGKELVAPGGN*AHSNED
Trigger: GTCCTCATTGCTGTGAGCGCAGTTACCACCTGGTGC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTGGCTAGGTGGGTGTaGAGGAGGCTGGGATGGTAT +
Preference number: 2 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKLARWV*RRLGWY
Trigger: ATACCATCCCAGCCTCCTCCACACCCACCTAGCCAG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 72 bp CTGCCCACCAGCCTCGGGGCTCTGCCCACGAATGCGTaGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: LPTSLGALPTNA*ELAHPPSSPAQ
Trigger: CTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR GCA 72 bp TGTCCTGCCCACCAGCCTCGGGGCTCTGCCCACGAATaGGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGC +
Preference number: 3 (lower is better)
Translates to: CPAHQPRGSAHE*VGVGAPTLQSS
Trigger: GCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR GCA 72 bp CCAGTCCCCTTGTCCTGCCCACCAGCCTCGGGGCTCTaGCCACGAATGCGTGGGAGTTGGCGCACCCACCCT +
Preference number: 3 (lower is better)
Translates to: PVPLSCPPASGL*PRMRGSWRTHP
Trigger: AGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGGTGGGCAGGACAAGGGGACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 72 bp CCAGCCTCGGGGCTCTGCCCACGAATGCGTGGGAGTTaGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTA +
Preference number: 3 (lower is better)
Translates to: PASGLCPRMRGS*RTHPPVQPRVV
Trigger: TACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGCAGAGCCCCGAGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 72 bp AGGAGGGCTGGGTGGGAGGGGACACTGCCAAGGACATaGGACCTCTGGCTAGGTGGGTGTGGAGGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: RRAGWEGTLPRT*DLWLGGCGGGW
Trigger: CCAGCCTCCTCCACACCCACCTAGCCAGAGGTCCCATGTCCTTGGCAGTGTCCCCTCCCACCCAGCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 72 bp ATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTaGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: IAGLCLAILGKS*SPLQLLRAEPW
Trigger: CCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCACCCCCTCGTTCAGTTaGACAGTGAGGCACCAGGTG +
Preference number: 3 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSTPSFS*TVRHQV
Trigger: CACCTGGTGCCTCACTGTCAAACTGAACGAGGGGGT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR GCA 72 bp CTCGTTCAGTTTGACAGTGAGGCACCAGGTGGTAACTaGGCTCACAGCAATGAGGACTGTCCGCACGCACGG +
Preference number: 3 (lower is better)
Translates to: LVQFDSEAPGGN*AHSNEDCPHAR
Trigger: CCGTGCGTGCGGACAGTCCTCATTGCTGTGAGCGCAGTTACCACCTGGTGCCTCACTGTCAAACTGAACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR GCA 72 bp TGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTaGCTAGCGATTCTGGGAAAGAGTTGGTCTCCCTTG +
Preference number: 3 (lower is better)
Translates to: CGLVWWDLIAGL*LAILGKSWSPL
Trigger: CAAGGGAGACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CCA 72 bp CCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTaGCCTTGCCTCAGTCTCTTACAAAAAGTCATAATA +
Preference number: 3 (lower is better)
Translates to: PSSPAQGGSSEA*PCLSLLQKVII
Trigger: TATTATGACTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCGCTGGTGGTGTGGGTaGCGGCGGCGTTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWRWWCG*RRRCSG
Trigger: GCCTGAGCAACGCCGCCGGCACCCACACCACCAGCG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGGGCTCGGGGTCCACTaGAGGGCCCTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVGLGVH*RALAGP
Trigger: TGGCCCAGCCAGGGCCCTCCAGTGGACCCCGAGCCC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCACAGCGGCTGCCGGTaGAGCCAGCAGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCHSGCR*SQQGRH
Trigger: GTGTCTGCCCTGCTGGCTTCACCGGCAGCCGCTGTG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCCTGTGGGGGCAGGCTaGCTCCCTCCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWPVGAG*LPPSSR
Trigger: CCTGGAGGAAGGAGGGAGGCAGCCTGCCCCCACAGG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTGGCACGAGGCCTCCTaGGGCCCACAGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWWHEAS*GPQAEG
Trigger: GCCCTCAGCCTGTGGGCCCCAGGAGGCCTCGTGCCA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCCCTCCGTGTGGTGCTaGCAGCTCTGGCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCPSVWC*QLWHAP
Trigger: AGGGGCGTGCCAGAGCTGCCAGCACCACACGGAGGG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGAGGGAGCCATGGGTCTaGTGCCGGGCAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWREPWV*CRAGRL
Trigger: CAGCCTGCCTGCCCGGCACCAGACCCATGGCTCCCT...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCAGGTCCAGGGGCTGTaGAGGTGGGGCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPQVQGL*RWGSRP
Trigger: CGGCCTGGAGCCCCACCTCCACAGCCCCTGGACCTG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGTGGTGGGCTCCCACTaGCCTGGCACCTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCVVGSH*PGTSGS
Trigger: ACTCCCTGAGGTGCCAGGTCAGTGGGAGCCCACCAC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGGCTCGCCAGGGCCTaGAGCATCTCAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWRLARA*SISARW
Trigger: CCAGCGGGCTGAGATGCTGCAGGCCCTGGCGAGCCT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCGGCGTCGGAGGGCTaGACGCTAGGGAAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWPASEG*TLGKWS
Trigger: GCTCCACTTCCCTAGCGTGCAGCCCTCCGACGCCGG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGCCGGGCAGGCAGGCTaGCTCCTCTCTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWAGQAG*LLSCAM
Trigger: CATGGCACAAGAGAGGAGGCAGCCTGCCTGCCCGGC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCCGTGTGTTGGCCCCTaGCTGGGCGCGATGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPPCVGP*LGAMLQ
Trigger: CTGCAGCATCGCGCCCAGGCAGGGGCCAACACACGG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGGCCCCATCGTGCACTaGTTCCACGGTGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWGPIVH*FHGEAP
Trigger: GGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCATCAGGGTCCAAGAGTaGGCTGCCCTGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCIRVQE*AALWPG
Trigger: GCCGGGCCACAGGGCAGCCCACTCTTGGACCCTGAT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCCTGGGCGGTGCCTGTaGGGCTGGTGGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPPGRCL*GWWPHR
Trigger: TCTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGGTGCACCACGCTCTaGGAGTGGGAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGCTTL*EWEGLR
Trigger: CCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGATGTGGCCATGGACCTaGTGCCCAGCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWMWPWT*CPAGRL
Trigger: CAGCCTGCCCGCTGGGCACCAGGTCCATGGCCACAT...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGCCTCTGCGTCACAGTaGAGCGCAGCTCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPASASQ*SAALRR
Trigger: ACGGCGGAGAGCTGCGCTTCACTGTGACGCAGAGGC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGTGGTGGGCTCCCACTaGCCTGGCACCTCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVVVGSH*PGTSGS
Trigger: ACTCCCTGAGGTGCCAGGTCAGTGGGAGCCCACCAC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGCTGCCCAGCGCTGCTaGGGGCACGGCACAGGTACT +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAAAQRC*GHGTGT
Trigger: AGTACCTGTGCCGTGCCCTCAGCAGCGCTGGGCAGC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCTGCCCCCGTGCACCTaGAGCATAGCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPLPPCT*SIALAT
Trigger: TGTGGCCAGGGCTATGCTTCAGGTGCACGGGGGCAG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGATGTCTGTGTTCTCTaGCCGGGCCTGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCDVCVL*PGLWGQ
Trigger: CTGCCCCCACAGGCCCGGTCAGAGAACACAGACATC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGGTGTAGCTGGGGCCTaGATGGGGGCTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCGVAGA*MGAVKD
Trigger: GTCCTTCACAGCCCCCATTCAGGCCCCAGCTACACC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTTGAGCCATGTACCTaGTGCCGGGCAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCLEPCT*CRAGRL
Trigger: CAGCCTCCCTGCCCGGCATCAGGTACATGGCTCAAG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCGGGAGCCCACAATCTaGTGCCGGCTGGGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCREPTI*CRLGKL
Trigger: CAGCTTACCCAGCCGGCATCAGATTGTGGGCTCCCG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCACAGCGGCTGCCGGTaGAGCCAGCAGGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAHSGCR*SQQGRH
Trigger: GTGTCTGCCCTGCTGGCTTCACCGGCAGCCGCTGTG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTCTGGAAGTCCCCGCTaGCCACGTCTCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSGSPR*PRLRCR
Trigger: TCGGCAGCGGAGACGTGGGCAGCGGGGACTTCCAGA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTAGGGCGGGGTCGATCTaGAGCTGGGTGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPRAGSI*SWVEER
Trigger: CCTCTCCTCCACCCAGCTGCAGATCGACCCCGCCCT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCGGCGTCGGAGGGCTaGACGCTAGGGAAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPASEG*TLGKWS
Trigger: GCTCCACTTCCCTAGCGTGCAGCCCTCCGACGCCGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGCCTGTTGTCCCGGCTaGACGGTGAGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWACCPG*TVSCGG
Trigger: CCCTCCACAGCTCACCGTGCAGCCGGGACAACAGGC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGCCGGTTGGTGGCAGTaGACACGTAGGTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCAGWWQ*TRRCRH
Trigger: ATGCCGGCACCTACGTGTGCACTGCCACCAACCGGC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTAGCATCTCAGCCCGCTaGACAGGCCGGCCAGACTCG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPSISAR*TGRPDS
Trigger: CGAGTCTGGCCGGCCTGTCCAGCGGGCTGAGATGCT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGCGTCGCAAGTGGCTTaGCCGTCCGTGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWASQVA*PSVSRK
Trigger: CTTCCTGGACACGGACGGCCAAGCCACTTGCGACGC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGCAAGTGTGGGCAGCTTaGCCAGCAGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVQVWAA*PAAGAP
Trigger: CGGAGCCCCTGCTGCTGGCCAAGCTGCCCACACTTG...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCAAGTGTGGGCAGCTTaGCCAGCAGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPQVWAA*PAAGAP
Trigger: CGGAGCCCCTGCTGCTGGCCAAGCTGCCCACACTTG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGATCAGGGTCCAAGAGTaGGCTGCCCTGTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWIRVQE*AALWPG
Trigger: GCCGGGCCACAGGGCAGCCCACTCTTGGACCCTGAT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGGCAGGCACAGGGCTaGCAATCCTCAGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGQAQG*QSSGVP
Trigger: TGGGACGCCTGAGGATTGCCAGCCCTGTGCCTGCCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTCTTCAACTTGGACCTaGGGAGCCCCCGGGGCCACG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSSTWT*GAPGAT
Trigger: CGTGGCCCCGGGGGCTCCCCAGGTCCAAGTTGAAGA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCCTTGCCCTGCCGGTTaGTGGCAGTGCACACGTAGG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCPCPAG*WQCTRR
Trigger: CCTACGTGTGCACTGCCACCAACCGGCAGGGCAAGG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGCCCAGCCTTGGGGATaGCACCGTAGTCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCAQPWG*HRSQGS
Trigger: GCTACCCTGACTACGGTGCCATCCCCAAGGCTGGGC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCCACAGGCCTCGGGGTaGCAGTGCAGGGCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPPQASG*QCRACE
Trigger: TTCGCAAGCCCTGCACTGCCACCCCGAGGCCTGTGG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGTGTTGGCCCCTGCCTaGGCGCGATGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAVLAPA*ARCCRS
Trigger: GGACCTGCAGCATCGCGCCCAGGCAGGGGCCAACAC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGGCAGGGCCGTGTGTTaGCCCCTGCCTGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLGRAVC*PLPGRD
Trigger: ATCGCGCCCAGGCAGGGGCCAACACACGGCCCTGCC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGCACACCTCTCACAGTaGCGCCCGCTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPAHLSQ*RPLCPG
Trigger: ACCAGGACACAGCGGGCGTCACTGTGAGAGGTGTGC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGCGTCACACTGGCTGCTaGTGCTGCCATGGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVRHTGC*CCHGGH
Trigger: GTGACCCCCATGGCAGCATCAGCAGCCAGTGTGACG...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGCCTTGCACTGGCACTaGCCAGCGGCGTCACACTGG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAALHWH*PAASHW
Trigger: CCAGTGTGACGCCGCTGGTCAGTGCCAGTGCAAGGC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGCCCGTCACTTGGCATaGGTACTCGCCAGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWARHLA*VLARVR
Trigger: GCGGACTCTGGCGAGTACTCATGCCAAGTGACGGGC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGCTAGCAGCCGCGCGTaGAGCAGCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSASSRA*SSSPSS
Trigger: GCTGCTGGGGCTGCTGCTGCACGCGCGGCTGCTAGC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCAAGTCTCCCCTGAGGTaGCCAGGCTCCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCKSPLR*PGSLAH
Trigger: ATGAGCGAGGGAGCCTGGGCACCTCAGGGGAGACTT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTACAGCGCTCACAGGTaGCCAGGTAGAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPYSAHR*PGRARW
Trigger: CCAGCGGGCTCTACCTGGGCACCTGTGAGCGCTGTA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGGCCCTGGCTGGGGTTaGCATAGTAACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPGPGWG*HSNLGH
Trigger: GTGCCCCAGGTTACTATGGCAACCCCAGCCAGGGCC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGATAGCCCTGGCCACATaGTGCCCAGCGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVIALAT*CPALLR
Trigger: CCTCAGCAGCGCTGGGCAGCATGTGGCCAGGGCTAT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTACTGTCCTGAGTCCTaGTGGGCCACCCGGGGAATG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWYCPES*WATRGM
Trigger: CATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTA...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGCCTCGGGGTGGCAGTaGAGGGCTTGCGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWASGWQ*RACECS
Trigger: TGAACATTCGCAAGCCCTGCACTGCCACCCCGAGGC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCCCTGCCTGGGCGCGATaGTGCAGGTCCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLPAWAR*CRSRGC
Trigger: ACAGCCCCTGGACCTGCAGCATCGCGCCCAGGCAGG...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCAAGCTCAGTCGGATCTaGTCCCGGAAGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCKLSRI*SRKRRL
Trigger: CAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGCACGCGGGTGAAGTaGGCATCGCAGCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGTRVK*ASQLSQ
Trigger: TTGCGAGAGCTGCGATGCCCACTTCACCCGCGTGCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGCGTCGCAAGTGGCTTaGCCGTCCGTGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVASQVA*PSVSRK
Trigger: CTTCCTGGACACGGACGGCCAAGCCACTTGCGACGC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCATGAAGTTGCTGGGCTaGCCAGGGCTGGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCMKLLG*PGLGSL
Trigger: GAGGGATCCCAGCCCTGGCCAGCCCAGCAACTTCAT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGAGGGCTGGCCCTGGCTaGGGTTGCCATAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWRAGPG*GCHSNL
Trigger: CAGGTTACTATGGCAACCCCAGCCAGGGCCAGCCCT...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGGGCTCGGGGTCCACTaGAGGGCCCTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLGLGVH*RALAGP
Trigger: TGGCCCAGCCAGGGCCCTCCAGTGGACCCCGAGCCC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGGGCAGGCACAGGGCTaGCAATCCTCAGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAGQAQG*QSSGVP
Trigger: TGGGACGCCTGAGGATTGCCAGCCCTGTGCCTGCCC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTGCACGGTGAGCTGTaGAGGGTGTATGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCLHGEL*RVYGGH
Trigger: GTGGCCTCCATACACCCTCCACAGCTCACCGTGCAG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGCCTTCGCAGGAAGCTaGCCGCTAGGACCCCCTATC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWAFAGS*PLGPPI
Trigger: GATAGGGGGTCCTAGCGGCCAGCTTCCTGCGAAGGC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTGCCTGTGGGGCTGGTaGCCACACAGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWCLWGW*PHRGRS
Trigger: GCTTCTACCTCTGTGTGGCCACCAGCCCCACAGGCA...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGGGAACCATGGGTCTaGTGCCGGGCAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWREPWV*CRAGRL
Trigger: CAGCCTTCCTGCCCGGCACCAGACCCATGGTTCCCT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCATGTGACCTGCGCGTaGGCCTGTCCTGCCACCACA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPHVTCA*ACPATT
Trigger: TGTGGTGGCAGGACAGGCCCACGCGCAGGTCACATG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGTGGGGCGCGCAGCTTaGACCAGTGGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAVGRAA*TSGWWV
Trigger: CACCCACCATCCACTGGTCCAAGCTGCGCGCCCCAC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGTCCTGAGTCCTGCTaGGCCACCCGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPCPESC*ATRGMT
Trigger: GGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCAGGGGCTGTGGAGGTaGGGCTCCAGGCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRQGLWR*GSRPGR
Trigger: ACGGCCCGGCCTGGAGCCCCACCTCCACAGCCCCTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGTGTTGGCCCCTGCCTaGGCGCGATGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLVLAPA*ARCCRS
Trigger: GGACCTGCAGCATCGCGCCCAGGCAGGGGCCAACAC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCATACCGGCTCGCTGTaGCAGTCTCTGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCHTGSL*QSLCPQ
Trigger: CTGAGGACACAGAGACTGTCACAGCGAGCCGGTATG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGCCGAGGCCATCTCCTaGTGCATCATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPAEAIS*CIICQQ
Trigger: CTGCTGGCAGATGATGCATCAGGAGATGGCCTCGGC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCTGGGGCCCACAGGCTaGGGGCCCAGGAACACTGGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCLGPTG*GPRNTG
Trigger: CCCAGTGTTCCTGGGCCCTCAGCCTGTGGGCCCCAG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGCAGTGGCTACGCAGGTaGAAGTCACTGTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVQWLRR*KSLSGP
Trigger: GGGGCCAGACAGTGACTTTCACCTGCGTAGCCACTG...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCCATGCAGAAGCACTTaGGGCAGCCGTCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWPCRST*GSRPGF
Trigger: AAAACCCGGACGGCTGCCTCAAGTGCTTCTGCATGG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCCTCCACTGTCACTGTaGTGGGCTTGCTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPPPLSL*WACWEP
Trigger: AGGCTCCCAGCAAGCCCATCACAGTGACAGTGGAGG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCAGGAAGACTCTATTCTaGTGGGTGCAGGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCRKTLF*WVQGWR
Trigger: CCGCCAGCCCTGCACCCATCAGAATAGAGTCTTCCT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCTTGGACCAGGACTTaGGCAAAGGCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPWTRT*AKASAE
Trigger: CTCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTACGGAGGGCAAGGCTTaGACGATCAGCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPTEGKA*TISWAV
Trigger: CACTGCCCAGCTGATCGTTCAAGCCTTGCCCTCCGT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCTTGCTCCATGTCACCTaGGGCTTAGGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCLLHVT*GLGSPR
Trigger: CCTGGGTGACCCTAAGCCTCAGGTGACATGGAGCAA...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCAGGGCGGGGTCGATCTaGAGCTGGGTGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLRAGSI*SWVEER
Trigger: CCTCTCCTCCACCCAGCTGCAGATCGACCCCGCCCT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAAGTCTCCCCTGAGGTaGCCAGGCTCCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWKSPLR*PGSLAH
Trigger: ATGAGCGAGGGAGCCTGGGCACCTCAGGGGAGACTT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGGTCCAAGAGTGGGCTaGCCTGTGGCCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLGPRVG*PVARLC
Trigger: ACACAGCCGGGCCACAGGGCAGCCCACTCTTGGACC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCATAGCCCTGGCCACATaGTGCCCAGCGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAIALAT*CPALLR
Trigger: CCTCAGCAGCGCTGGGCAGCATGTGGCCAGGGCTAT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCAGTACAGCCTCACTGTaGGGCCTTCATGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCSTASL*GLHAPG
Trigger: CCCAGGTGCATGAAGGCCGCACAGTGAGGCTGTACT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGCGCCACGTCACCTGTaGCTGCCCAGGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSAPRHL*LPRHHA
Trigger: TGCGTGGTGCCTGGGCAGGCACAGGTGACGTGGCGC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGCCGGGCAGGCAGGCTaGCTCCTCTCTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLAGQAG*LLSCAM
Trigger: CATGGCACAAGAGAGGAGGCAGCCTGCCTGCCCGGC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTTCAGATCCAGACTCTaGCCCTCCGACACGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWFRSRL*PSDTWE
Trigger: CTCCCACGTGTCGGAGGGGCAGAGTCTGGATCTGAA...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCCAGGGTACCTGAGCTaGCCGTCACTTGGCATGAGT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCPGYLS*PSLGMS
Trigger: ACTCATGCCAAGTGACGGGCAGCTCAGGTACCCTGG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGCCGGTTGGTGGCAGTaGACACGTAGGTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAAGWWQ*TRRCRH
Trigger: ATGCCGGCACCTACGTGTGCACTGCCACCAACCGGC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGCCTCGGGGTGGCAGTaGAGGGCTTGCGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPASGWQ*RACECS
Trigger: TGAACATTCGCAAGCCCTGCACTGCCACCCCGAGGC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCTGGATGGACTGCTGTaGAGGCGTCACTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPLDGLL*RRHYLG
Trigger: CCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGTGAAAGTCACTGTCTaGCCCCGGGAAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWVKVTV*PREAWM
Trigger: CATCCAGGCTTCCCGGGGCCAGACAGTGACTTTCAC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTAAGCTCAGTCGGATCTaGTCCCGGAAGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPKLSRI*SRKRRL
Trigger: CAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGCACAATTTCCTGGGTaGTGGGCCTGCACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVAQFPG*WACTSR
Trigger: GCGGGAAGTGCAGGCCCACCACCCAGGAAATTGTGC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGGAGAACATGTTCTCTaGGTTGGTCAGCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWGEHVL*VGQRAG
Trigger: GCCTGCCCGCTGACCAACCCAGAGAACATGTTCTCC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCGCAGCCGGGAGCCGTaGACCTGGGCATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRSREP*TWAWGG
Trigger: GCCTCCCCATGCCCAGGTCCACGGCTCCCGGCTGCG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCTTGTGCCATGTGACCTaGGCATGGGCGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPALCHVT*AWACPG
Trigger: CCCTGGGCACGCCCATGCCCAGGTCACATGGCACAA...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGGGTGTGGATCCTCCTaGGATGGAAGTGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCGCGSS*DGSVRE
Trigger: CTCCCTGACACTTCCATCCCAGGAGGATCCACACCC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCAGGTCCAGGGGCTGTaGAGGTGGGGCTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCQVQGL*RWGSRP
Trigger: CGGCCTGGAGCCCCACCTCCACAGCCCCTGGACCTG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTCTGAGAGCTGGACCTaGCGCTGGTTCAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWSESWT*RWFRVP
Trigger: TGGAACTCTGAACCAGCGTCAGGTCCAGCTCTCAGA...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCAGGAAGCAAGTGTCTaGGAACCTTCGGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCQEASV*EPSGSV
Trigger: GACGCTTCCCGAAGGTTCTCAGACACTTGCTTCCTG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCTTGGAAGGGCACTATaGAGTTGCTGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWLGRAL*SCWAGQ
Trigger: CTGGCCAGCCCAGCAACTTCATAGTGCCCTTCCAAG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTCCGGAGTCTGCCGGTaGGACCTGCGGGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTSGVCR*DLREPQ
Trigger: CTGCGGCTCCCGCAGGTCTCACCGGCAGACTCCGGA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTCTGCTGGGGTCACTTaGGGGATCCGGAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSSAGVT*GIRRRE
Trigger: CTCCCGCCTCCGGATCCCTCAAGTGACCCCAGCAGA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGAATGCCGAACACCATaGCACGCGAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWECRTP*HASSWP
Trigger: AGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCAGGCTGGATGGGGTTaGCTTCATATCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWQAGWG*LHIQGH
Trigger: GTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCGCTGGTGGTGTGGGTaGCGGCGGCGTTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRRWWCG*RRRCSG
Trigger: GCCTGAGCAACGCCGCCGGCACCCACACCACCAGCG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCTGGGCCGGGGCCTCTaGGTCACAGTGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRLGRGL*VTVKRS
Trigger: GCTGCGCTTCACTGTGACGCAGAGGCCCCGGCCCAG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTACAGTCCGCTCCCAGTaGGAGTGTAGCCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSTVRSQ*ECSPGH
Trigger: GTGCCCCGGGCTACACTCGCACTGGGAGCGGACTGT...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTAGTACAGCCTCACTGTaGGGCCTTCATGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPSTASL*GLHAPG
Trigger: CCCAGGTGCATGAAGGCCGCACAGTGAGGCTGTACT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGAGGGATGACCCCAGGTaGAGTGCCTGCAGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVRDDPR*SACRLN
Trigger: ATTGAGCCTGCAGGCACTGCACCTGGGGTCATCCCT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGAGGGGCTGAGGGTCTaGTGGATGGTGACAAGGATA +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWEGLRV*WMVTRI
Trigger: TATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGCCCAGCGGGCAGGCTaGCTCCACGTTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSAQRAG*LHVCAM
Trigger: CATGGCACAAACGTGGAGGCAGCCTGCCCGCTGGGC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACCTTCTATCCGGTGCTaGCAGGGCAGTGGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLPSIRC*QGSGAR
Trigger: GCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGTGGGACTCCGCTTCTaGCCATTGTACAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWVGLRF*PLYSSI
Trigger: GATGCTGCTGTACAATGGGCAGAAGCGGAGTCCCAC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCATCCACCCGCAGGCTaGCATCTTTGTTCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWHPPAG*HLCSGV
Trigger: AACGCCTGAACAAAGATGGCAGCCTGCGGGTGGATG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCATCATTGCCTCCACTaGCTTCAGGGTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWHHCLH*LQGASL
Trigger: CAGACTGGCACCCTGAAGGCAGTGGAGGCAATGATG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTGGCACGAGGCCTCCTaGGGCCCACAGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTWHEAS*GPQAEG
Trigger: GCCCTCAGCCTGTGGGCCCCAGGAGGCCTCGTGCCA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCGTCACAGTGGAAGCTaGCTGGGATGCAGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPARHSGS*LGCSGW
Trigger: CCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGGAGGCGTCACTACCTaGGGAGGCATGCAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAGGVTT*GGMQPN
Trigger: GTTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGTGAAAGTCACTGTCTaGCCCCGGGAAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVVKVTV*PREAWM
Trigger: CATCCAGGCTTCCCGGGGCCAGACAGTGACTTTCAC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCACTTCCCGCCAGGCTaGATGGGGTTGCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCHFPPG*MGLPSY
Trigger: ATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCGCAGGCTGTCCATCTaGCCGCCGCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSRRLSI*PPPELL
Trigger: GAGGAGTTCTGGCGGCGGCCAGATGGACAGCCTGCG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGAGAACATGTTCTCTaGGTTGGTCAGCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGEHVL*VGQRAG
Trigger: GCCTGCCCGCTGACCAACCCAGAGAACATGTTCTCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGTAGAAGTAGTGTGGTaGGCTCCCACTGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWVEVVW*APTDLA
Trigger: TGCCAGGTCAGTGGGAGCCCACCACACTACTTCTAC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACCGGGCCGCACACTCTaGCTCCGCTGCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLPGRTL*LRCSST
Trigger: AGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCGCAGCCGGGAGCCGTaGACCTGGGCATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKRSREP*TWAWGG
Trigger: GCCTCCCCATGCCCAGGTCCACGGCTCCCGGCTGCG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCAGGGAACCATGGGTCTaGTGCCGGGCAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLREPWV*CRAGRL
Trigger: CAGCCTTCCTGCCCGGCACCAGACCCATGGTTCCCT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGAGCCCAGGACGACATaGCACACATACTCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVEPRTT*HTYSPE
Trigger: CTCAGGCGAGTATGTGTGCCATGTCGTCCTGGGCTC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCATGTGACTTGGGCATaGGCCTGTCCTTGCACCACA +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWHVTWA*ACPCTT
Trigger: TGTGGTGCAAGGACAGGCCCATGCCCAAGTCACATG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGAGGGAGCCATGGGTCTaGTGCCGGGCAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRREPWV*CRAGRL
Trigger: CAGCCTGCCTGCCCGGCACCAGACCCATGGCTCCCT...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGGGTGCACCACGCTCTaGGAGTGGGAGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCGCTTL*EWEGLR
Trigger: CCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCTCTCCGGAGTCTGCTaGGGTCACTTGAGGGATCCG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPALSGVC*GHLRDP
Trigger: CGGATCCCTCAAGTGACCCCAGCAGACTCCGGAGAG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGATGAGAGAGGTCTCCTaGGAGCCAGCGCCGTTACTG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWMREVS*EPAPLL
Trigger: CAGTAACGGCGCTGGCTCCCAGGAGACCTCTCTCAT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCTCAGCCACCGACATGTaGTGTAGCCGTAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCSATDM*CSRRRE
Trigger: CTCTCGTCTACGGCTACACCACATGTCGGTGGCTGA...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTCGGCTGAGGACACCTaGTATAGCCGCAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSAEDT*YSRSLE
Trigger: CTCAAGGCTGCGGCTATACCAGGTGTCCTCAGCCGA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGTCGGCTGAGGACACCTaGTATAGCCGCAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVSAEDT*YSRSLE
Trigger: CTCAAGGCTGCGGCTATACCAGGTGTCCTCAGCCGA...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGCATGGGCTTGCCCTaGTACCACGCACTTCAGATC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGMGLP*YHALQI
Trigger: GATCTGAAGTGCGTGGTACCAGGGCAAGCCCATGCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTGTCCTGAGTCCTGCTaGGCCACCCGGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLCPESC*ATRGMT
Trigger: GGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCAGTGGAACTCAACGCTaGCCCCTATGTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCSGTQR*PLCSGS
Trigger: AGACCCGGAACATAGGGGCCAGCGTTGAGTTCCACT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTTGGGCACAGCACAGTaGAACTCAACGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWLGTAQ*NSTLAP
Trigger: AGGGGCCAGCGTTGAGTTCCACTGTGCTGTGCCCAA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGTACTCAGCCCAGCCTTaGGGATGGCACCGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVYSAQP*GWHRSQ
Trigger: CTGACTACGGTGCCATCCCCAAGGCTGGGCTGAGTA...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGCCACCATTCAGACATaGTTCATGCAGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWATIQT*FMQLAR
Trigger: CCGTGCCAGCTGCATGAACCATGTCTGAATGGTGGC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGGCAGGGCCGTGTGTTaGCCCCTGCCTGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTGRAVC*PLPGRD
Trigger: ATCGCGCCCAGGCAGGGGCCAACACACGGCCCTGCC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCACAGCGCCACAACTTaGGAGCACAGTGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWHSATT*EHSAHF
Trigger: AAAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGGATCCCTCGAGGCATaGTGCTCCAACACAATGTTG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCGSLEA*CSNTML
Trigger: CAACATTGTGTTGGAGCATCATGCCTCGAGGGATCC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGCAGCCACATCCATGCTaGTACCAGAGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVQPHPC*YQRPCS
Trigger: AGAGCAGGGTCTCTGGTATCAGCATGGATGTGGCTG...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTAGCACCTCTGGCACCTaGCCATCTCTGTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSSTSGT*PSLWQG
Trigger: GCCCTGCCACAGAGATGGTCAGGTGCCAGAGGTGCT...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGCTGCCCAGCGCTGCTaGGGGCACGGCACAGGTACT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRAAQRC*GHGTGT
Trigger: AGTACCTGTGCCGTGCCCTCAGCAGCGCTGGGCAGC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCGGCAGGTTCGATGGTaGCCAGGACAGAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPARQVRW*PGQRFL
Trigger: CAGAAACCTCTGTCCTGGTCACCATCGAACCTGCCG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGAGAAGTCTCAGTCTTaGGCCATGTACCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCEKSQS*AMYLMP
Trigger: CGGCATCAGGTACATGGCTCAAGACTGAGACTTCTC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACATGGGCCTGGTGTCTaGATGGCAGGCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLHGPGV*MAGCPH
Trigger: GTGGGGGCAGCCTGCCATTCAGACACCAGGCCCATG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCTCAGCAGGGAGCCATaGGTCTGGTGTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCLSREP*VWCRAG
Trigger: GCCTGCCCGACACCAGACTCATGGCTCCCTGCTGAG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCAGTAGGGTGTCTGGGTaGAGTAGGGTATCACTCGCT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCSRVSG*SRVSLA
Trigger: AGCGAGTGATACCCTACTTCACCCAGACACCCTACT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGCCACTCGCCGTCATTaGTGGGATCTTCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCATRRH*WDLLRQ
Trigger: TTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCTGGGGACCGGCCGGTaGCCAGATCCTCACCGTCTA +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCLGTGR*PDPHRL
Trigger: TAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCAG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGCTAGCAGCCGCGCGTaGAGCAGCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVASSRA*SSSPSS
Trigger: GCTGCTGGGGCTGCTGCTGCACGCGCGGCTGCTAGC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCGTCACTGCCATCCCTaGAGTCTTCCTGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWRHCHP*SLPVHH
Trigger: GTGATGGACAGGAAGACTGCAGGGATGGCAGTGACG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGCACCCTCCGTGTGGTaGTGGCAGCTCTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRAPSVW*WQLWHA
Trigger: GGCGTGCCAGAGCTGCCAGCACCACACGGAGGGTGC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGCAGTCCTGTGGTGTaGCCCGTTGGGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSGSPVV*PVGHPH
Trigger: ATGGGGATGCCCAACGGGGCACACCACAGGACTGCC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGGTCCAAGAGTGGGCTaGCCTGTGGCCCGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCGPRVG*PVARLC
Trigger: ACACAGCCGGGCCACAGGGCAGCCCACTCTTGGACC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCACTTGGCTGCACATTaGGAATGGTCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCHLAAH*EWSGCR
Trigger: ACGGCATCCTGACCATTCGCAATGTGCAGCCAAGTG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGCCTGTTGTCCCGGCTaGACGGTGAGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRACCPG*TVSCGG
Trigger: CCCTCCACAGCTCACCGTGCAGCCGGGACAACAGGC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTACTGTGCGGCCTTCATaGACCTGGGTCCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSTVRPS*TWVLSG
Trigger: CCCCGAGAGGACCCAGGTGCATGAAGGCCGCACAGT...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGTGCGTGCCTGGGCGGTaGCTGTGGGGCTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKCVPGR*LWGWWP
Trigger: TGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCA...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGCGCCACGTCACCTGTaGCTGCCCAGGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTAPRHL*LPRHHA
Trigger: TGCGTGGTGCCTGGGCAGGCACAGGTGACGTGGCGC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGCCGGCTGGGTAAGCTaGCTCCGCGCTTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLAGWVS*LRACTR
Trigger: CCTGGTACAAGCGCGGAGGCAGCTTACCCAGCCGGC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGCCCAGCGGGCAGGCTaGCTCCACGTTTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLAQRAG*LHVCAM
Trigger: CATGGCACAAACGTGGAGGCAGCCTGCCCGCTGGGC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCACGGTGGCTTCAGTGTaGCCAGCAGAGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLTVASV*PAELVA
Trigger: CGCCACCAACTCTGCTGGGCACACTGAAGCCACCGT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCGATCTGCAGCTGGGTaGAGGAGAGGGGTGGCACGC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRRSAAG*RRGVAR
Trigger: GCGTGCCACCCCTCTCCTCCACCCAGCTGCAGATCG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGCGGCCTGTGTAACCTaGGGCACAAGCGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLAACVT*GTSVAS
Trigger: ACTTGCGACGCTTGTGCCCCAGGTTACACAGGCCGC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCTCCCGCCAGGCTGGATaGGGTTGCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPASRQAG*GCLHIQ
Trigger: CTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGA...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCCCTCGCTGGTGGTGTaGGTGCCGGCGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKPSLVV*VPAALL
Trigger: GAGCAACGCCGCCGGCACCCACACCACCAGCGAGGG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCATGAAGTTGCTGGGCTaGCCAGGGCTGGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLMKLLG*PGLGSL
Trigger: GAGGGATCCCAGCCCTGGCCAGCCCAGCAACTTCAT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGTCTCTGAGTGGCCATaGCAGTTACAGCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWVSEWP*QLQRSQ
Trigger: CTGTGAGCGCTGTAACTGCCATGGCCACTCAGAGAC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCCCTCCGTGTGGTGCTaGCAGCTCTGGCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTPSVWC*QLWHAP
Trigger: AGGGGCGTGCCAGAGCTGCCAGCACCACACGGAGGG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGGGCTGGCAGTCCTGTaGTGTGCCCCGTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLGLAVL*CAPLGI
Trigger: GATGCCCAACGGGGCACACCACAGGACTGCCAGCCC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTCCAGGAAACAAGTGTaGGCAGCTTGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPSRKQV*AAWPAA
Trigger: TGCTGCTGGCCAAGCTGCCCACACTTGTTTCCTGGA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGAGTGGGCTGCCCTGTaGCCCGGCTGTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLEWAAL*PGCVGE
Trigger: CTCTCCTACACAGCCGGGCCACAGGGCAGCCCACTC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCCTGTAGTGCTGGCTaGGAAGCCACCAACATGATG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWPCSAG*EATNMM
Trigger: CATCATGTTGGTGGCTTCCCAGCCAGCACTACAGGG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGTCACCCTCATAGCCTaGGGCACACTGCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPVTLIA*GTLLTV
Trigger: TACTGTGAGCAGTGTGCCCCAGGCTATGAGGGTGAC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGTCACCCTCATAGCCTaGGGCACACTGCTCACAGTA +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWVTLIA*GTLLTV
Trigger: TACTGTGAGCAGTGTGCCCCAGGCTATGAGGGTGAC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCCGGGCCGCACACTCTaGCTCCGCTGCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRPGRTL*LRCSST
Trigger: AGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGCCTTCGCAGGAAGCTaGCCGCTAGGACCCCCTATC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSAFAGS*PLGPPI
Trigger: GATAGGGGGTCCTAGCGGCCAGCTTCCTGCGAAGGC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGATCCGAGGGTTCAATaGCTGGCAAGCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPADPRVQ*LASAGC
Trigger: GCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCCGTGGACCTGGGCATaGGGAGGCAGGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASPWTWA*GGRLPP
Trigger: AGGGGGCAGCCTGCCTCCCCATGCCCAGGTCCACGG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCGTGGACCTGGGCATaGGGAGGCAGGCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSPWTWA*GGRLPP
Trigger: AGGGGGCAGCCTGCCTCCCCATGCCCAGGTCCACGG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTGGCTGGGGTGTAGCTaGGGCCTGAATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSWLGCS*GLNGGC
Trigger: ACAGCCCCCATTCAGGCCCCAGCTACACCCCAGCCA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGTCCTTCGGCCACGTaGGAGGACGAGGATTCAATG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPCPSAT*EDEDSM
Trigger: CATTGAATCCTCGTCCTCCCACGTGGCCGAAGGACA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTCAGCCACCGACATGTaGTGTAGCCGTAGACGAGAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSATDM*CSRRRE
Trigger: CTCTCGTCTACGGCTACACCACATGTCGGTGGCTGA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAATGTGGCCATGGACCTaGTGCCCAGCGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLMWPWT*CPAGRL
Trigger: CAGCCTGCCCGCTGGGCACCAGGTCCATGGCCACAT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTTCAGTCTCAGCATGTaGCCATGGACCTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPFSLSM*PWTWCP
Trigger: TGGGCACCAGGTCCATGGCCACATGCTGAGACTGAA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTTGAAACTGGCATCTTaGCCCTGCTGTACCGTGCTG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWLKLAS*PCCTVL
Trigger: CAGCACGGTACAGCAGGGCCAAGATGCCAGTTTCAA...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCGTTGGGGCTGATGTaGACGTTGTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPLGLM*TLSSSS
Trigger: AGAGCTGGAGGACAACGTCCACATCAGCCCCAACGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTAGGCTCCATGGTTGCTaGGCCGGGTGCCCACGATGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCRLHGC*AGCPRW
Trigger: CCATCGTGGGCACCCGGCCCAGCAACCATGGAGCCT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGTGGGGCGCGCAGCTTaGACCAGTGGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLVGRAA*TSGWWV
Trigger: CACCCACCATCCACTGGTCCAAGCTGCGCGCCCCAC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGTGCTGCCAGGGCAGTaGGGCGCGCAGCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPVLPGQ*GAQLGP
Trigger: TGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCAC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCGCCCAGCAGAGTTGGTaGCGTTACAGATGTACTGTC +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCAQQSW*RYRCTV
Trigger: GACAGTACATCTGTAACGCCACCAACTCTGCTGGGC...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGCCAGAGGTGTGGGGTaGCGGATAGTGGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSARGVG*RIVAMP
Trigger: TGGCATGGCCACTATCCGCCACCCCACACCTCTGGC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCTCGGAATCTTGGCACTaGCCCCCATTCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPASESWH*PPFWQG
Trigger: ACCCTGCCAGAATGGGGGCCAGTGCCAAGATTCCGA...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGCCGGTTCACACAAGTaGCGTCCGGCCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRAGSHK*RPAHRP
Trigger: AGGCCTGTGGGCCGGACGCCACTTGTGTGAACCGGC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTCCAGGCGTAGCTCATaGTGCATGTTGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPSRRSS*CMLVRA
Trigger: GGCTCTCACCAACATGCACCATGAGCTACGCCTGGA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCTCCTCACCGTCTACTTaGATGGAGCCTCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPASSPST*MEPLWP
Trigger: GGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGA...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTTCTCCAGGCTGCTTaGCAGAACAATTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCLLQAA*QNNWPH
Trigger: ATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAG...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCTTCTCCAGGCTGCTTaGCAGAACAATTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWLLQAA*QNNWPH
Trigger: ATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGCCTCTGCGTCACAGTaGAGCGCAGCTCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRASASQ*SAALRR
Trigger: ACGGCGGAGAGCTGCGCTTCACTGTGACGCAGAGGC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCAGGCTCACAGGTCTCTaGGTGGCCATGGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPARLTGL*VAMAVT
Trigger: TGTAACTGCCATGGCCACTCAGAGACCTGTGAGCCT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGCACACCTCTCACAGTaGCGCCCGCTGTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLAHLSQ*RPLCPG
Trigger: ACCAGGACACAGCGGGCGTCACTGTGAGAGGTGTGC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGCCTTGCACTGGCACTaGCCAGCGGCGTCACACTGG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTALHWH*PAASHW
Trigger: CCAGTGTGACGCCGCTGGTCAGTGCCAGTGCAAGGC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGTTGGCTGTTGCGTTaGGGGTTCACCAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSWLLR*GFTRAK
Trigger: CTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGATGTCTGTGTTCTCTaGCCGGGCCTGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRDVCVL*PGLWGQ
Trigger: CTGCCCCCACAGGCCCGGTCAGAGAACACAGACATC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTCCGGAGTCTGCCGGTaGGACCTGCGGGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKSGVCR*DLREPQ
Trigger: CTGCGGCTCCCGCAGGTCTCACCGGCAGACTCCGGA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGCCTGAATGGGGGCTGTaGAGGACAGAGACAACAATG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVPEWGL*RTETTM
Trigger: CATTGTTGTCTCTGTCCTTCACAGCCCCCATTCAGG...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTTCGGACTGGAGGGATaGCCCCAGGTGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRFGLEG*PQVQCL
Trigger: CAGGCACTGCACCTGGGGTCATCCCTCCAGTCCGAA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCGTCACTGTGGGAGATaGGGTCTCAATTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWRHCGR*GLNSHW
Trigger: CCAATGAGAATTGAGACCTCATCTCCCACAGTGACG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCTCAGCAGGGAGCCATaGGTCTGGTGTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRLSREP*VWCRAG
Trigger: GCCTGCCCGACACCAGACTCATGGCTCCCTGCTGAG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTTCAGGCAGGCTCCTTaGGAAACTGTTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWFRQAP*ETVTRE
Trigger: CTCCCTGGTAACAGTTTCTCAAGGAGCCTGCCTGAA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACTGGGGACCGGCCGGTaGCCAGATCCTCACCGTCTA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPLGTGR*PDPHRL
Trigger: TAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCAG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGCCTCACAGGTGTATaGGCCCTGGTCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSGLTGV*ALVCLL
Trigger: AAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGAGGCTCGCCAGGGCCTaGAGCATCTCAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKRLARA*SISARW
Trigger: CCAGCGGGCTGAGATGCTGCAGGCCCTGGCGAGCCT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCTGGGCCGGGGCCTCTaGGTCACAGTGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSLGRGL*VTVKRS
Trigger: GCTGCGCTTCACTGTGACGCAGAGGCCCCGGCCCAG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGACCAGGGGCTGTCTGTaGAGGGGCGCAGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRTRGCL*RGAELG
Trigger: GCCCAGTTCTGCGCCCCTGCACAGACAGCCCCTGGT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTACAGCGCTCACAGGTaGCCAGGTAGAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCYSAHR*PGRARW
Trigger: CCAGCGGGCTCTACCTGGGCACCTGTGAGCGCTGTA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGGCAGTCCTGTGGTGTaGCCCGTTGGGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRGSPVV*PVGHPH
Trigger: ATGGGGATGCCCAACGGGGCACACCACAGGACTGCC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCTGTCAGTTGGCTGTTaGGTTGAGGGTTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPLSVGC*VEGSPE
Trigger: CTCTGGTGAACCCTCAACGCAACAGCCAACTGACAG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCCTGTGGGGGCAGGCTaGCTCCCTCCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASPVGAG*LPPSSR
Trigger: CCTGGAGGAAGGAGGGAGGCAGCCTGCCCCCACAGG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTGCGTGCCTGGGCGGTaGCTGTGGGGCTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKCVPGR*LWGWWP
Trigger: TGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGCCGGGCAGGAAGGCTaGCTCCACGTTTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASAGQEG*LHVCAT
Trigger: CGTGGCGCAAACGTGGAGGCAGCCTTCCTGCCCGGC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGCCGGGCAGGAAGGCTaGCTCCACGTTTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVAGQEG*LHVCAT
Trigger: CGTGGCGCAAACGTGGAGGCAGCCTTCCTGCCCGGC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTACAGAGGTTTCTGTGTaGTCAGAGCCCAGGACGACA +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPTEVSV*SEPRTT
Trigger: TGTCGTCCTGGGCTCTGAGCACACAGAAACCTCTGT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTGGCAGTGCAGGGCTTaGGAATGTTCACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLWQCRA*ECSQRL
Trigger: CAGCCGCTGTGAACATTCGCAAGCCCTGCACTGCCA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGCCTGGGCGCGATGCTaGAGGTCCAGGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASAWARC*RSRGCG
Trigger: TCCACAGCCCCTGGACCTGCAGCATCGCGCCCAGGC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCCCTGCCTGGGCGCGATaGTGCAGGTCCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVPAWAR*CRSRGC
Trigger: ACAGCCCCTGGACCTGCAGCATCGCGCCCAGGCAGG...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCCCGTGTGTTGGCCCCTaGCTGGGCGCGATGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVPCVGP*LGAMLQ
Trigger: CTGCAGCATCGCGCCCAGGCAGGGGCCAACACACGG...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGTGCTCTGGCACACGTTaGTCACACCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVCSGTR*SHQSRS
Trigger: GCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCA...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGGCCGGCCAGACTCGTaGACCCAGTGTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLGRPDS*TQCSSE
Trigger: CTCAGAGGAACACTGGGTCCACGAGTCTGGCCGGCC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCTCACAGGAGCTGGCATaGCCATTGCAATTACAGCCA +
Preference number: 4 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCSQELA*PLQLQP
Trigger: TGGCTGTAATTGCAATGGCCATGCCAGCTCCTGTGA...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGGAAGCGTCGATGTATaGGCAGGGACAGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCGSVDV*AGTGPA
Trigger: TGCCGGCCCTGTCCCTGCCCATACATCGACGCTTCC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCTCGCTGGTGGTGTaGGTGCCGGCGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKPSLVV*VPAALL
Trigger: GAGCAACGCCGCCGGCACCCACACCACCAGCGAGGG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAAGGGGCTCCGTAGCATaGGCAGGGCTGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPRGSVA*AGLAVL
Trigger: CAGGACTGCCAGCCCTGCCCATGCTACGGAGCCCCT...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGCATGAGTCACAAGTaGGGTGGCCATCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSMSHK*GGHLCP
Trigger: TGGACACAGATGGCCACCCCACTTGTGACTCATGCT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGACCAGAGCAAAGCCTTaGAAGTCCCCAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWTRAKP*KSPGAK
Trigger: CTTTGCTCCTGGGGACTTCCAAGGCTTTGCTCTGGT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCCAAGCCAACATAGCCTaGGGGGCAGCGACACTCTTC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLQANIA*GAATLF
Trigger: GAAGAGTGTCGCTGCCCCCCAGGCTATGTTGGCTTG...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGCTGTGGAGGGTGTATaGAGGCCACAGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCAVEGV*RPQGQW
Trigger: CCACTGCCCCTGTGGCCTCCATACACCCTCCACAGC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTAGCAGCTGTAATGGCTaGGATGAGCAGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPSSCNG*DEQCGD
Trigger: ATCCCCACACTGCTCATCCCAGCCATTACAGCTGCT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCCTGGGCGGTGCCTGTaGGGCTGGTGGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKPGRCL*GWWPHR
Trigger: TCTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTATCCACAGGAGACACCTaGTGCAGCCGCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLSTGDT*CSRSRE
Trigger: CTCCCTGCTGCGGCTGCACCAGGTGTCTCCTGTGGA...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGGGCTGAGGGTCTGCTaGATGGTGACAAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVGLRVC*MVTRIE
Trigger: TTCTATCCTTGTCACCATCCAGCAGACCCTCAGCCC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCTCTCCGGAGTCTGCTaGGGTCACTTGAGGGATCCG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSLSGVC*GHLRDP
Trigger: CGGATCCCTCAAGTGACCCCAGCAGACTCCGGAGAG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCACTGGGCACATGGGATaGCCCTCTGCTCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLTGHMG*PSALDG
Trigger: ACCATCGAGAGCAGAGGGCCATCCCATGTGCCCAGT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTTGTGCCATGTGACCTaGGCATGGGCGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRLCHVT*AWACPG
Trigger: CCCTGGGCACGCCCATGCCCAGGTCACATGGCACAA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTCTTCAACTTGGACCTaGGGAGCCCCCGGGGCCACG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTSSTWT*GAPGAT
Trigger: CGTGGCCCCGGGGGCTCCCCAGGTCCAAGTTGAAGA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTGGACCAGTGGATGGTaGGTGGAGGGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRWTSGW*VEGCPW
Trigger: CCACGGGCAACCCTCCACCCACCATCCACTGGTCCA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGTGCTGCCAGGGCAGTaGGGCGCGCAGCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSVLPGQ*GAQLGP
Trigger: TGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCAC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTGGATCCTCCTGGGATaGAAGTGTCAGGGAGATTGC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWWILLG*KCQGDC
Trigger: GCAATCTCCCTGACACTTCCATCCCAGGAGGATCCA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTCAAACTCCACAGAGTaGCCGACTACCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPSNSTE*PTTTEC
Trigger: GCACTCTGTGGTAGTCGGCCACTCTGTGGAGTTTGA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGTCAGCCAGCTCCACGTaGGCAATCCTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSASST*AILMML
Trigger: AAGCATCATCAGGATTGCCCACGTGGAGCTGGCTGA...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCCATCCGCAGAGTCTaGCCGGAAGGTGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPIRRV*PEGDLD
Trigger: ATCAAGATCACCTTCCGGCCAGACTCTGCGGATGGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCCTTGGAACTTGCCCTaGGAGGTCCCGTTGACAGGG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSPWNLP*EVPLTG
Trigger: CCCTGTCAACGGGACCTCCCAGGGCAAGTTCCAAGG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGCCCAGCCTTGGGGATaGCACCGTAGTCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRAQPWG*HRSQGS
Trigger: GCTACCCTGACTACGGTGCCATCCCCAAGGCTGGGC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGTGGCAAGTAGGGCAGTaGGAGATGCCATGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVWQVGQ*EMPCVV
Trigger: CACAACACATGGCATCTCCCACTGCCCTACTTGCCA...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTGGCAGGGTCGGTCCTaGCAAGTAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCWQGRS*QVGQWE
Trigger: CTCCCACTGCCCTACTTGCCAGGACCGACCCTGCCA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGAGTGAGCACTCATATTaGTGGCTGGGGACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWSEHSY*WLGTAV
Trigger: TACAGCTGTCCCCAGCCACCAATATGAGTGCTCACT...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCATGGTTCATGCAGCTaGCACGGGTTCTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWHGSCS*HGFSSC
Trigger: ACATGAGGAGAACCCGTGCCAGCTGCATGAACCATG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGGCCATCGGCTGTGCTaGTCCGAACCTCGAATTCAA +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAGHRLC*SEPRIQ
Trigger: TTGAATTCGAGGTTCGGACCAGCACAGCCGATGGCC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCGCCACATTAGGACCTaGGGACCGGCCGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRHIRT*GPAGDQ
Trigger: CTGGTCACCGGCCGGTCCCCAGGTCCTAATGTGGCG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGAAGAGAACTTGCCCCTaGTCAGTGTGGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVKRTCP*SVWPHL
Trigger: CAGATGTGGCCACACTGACCAGGGGCAAGTTCTCTT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCGTCACACTGGCTGCTaGTGCTGCCATGGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRHTGC*CCHGGH
Trigger: GTGACCCCCATGGCAGCATCAGCAGCCAGTGTGACG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGACTCCTCTCGGAAGATaGTCTCATAGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVTPLGR*SHSSSS
Trigger: AGAGGAGGAGCTATGAGATCATCTTCCGAGAGGAGT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCTGCCCCCGTGCACCTaGAGCATAGCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKLPPCT*SIALAT
Trigger: TGTGGCCAGGGCTATGCTTCAGGTGCACGGGGGCAG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCTGAATGGGGGCTGTaGAGGACAGAGACAACAATG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPEWGL*RTETTM
Trigger: CATTGTTGTCTCTGTCCTTCACAGCCCCCATTCAGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCATGGGCCTGGTGTCTaGATGGCAGGCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASHGPGV*MAGCPH
Trigger: GTGGGGGCAGCCTGCCATTCAGACACCAGGCCCATG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGAGCCTCCAGGGTACCTaGGCTGCCCGTCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRSLQGT*AARHLA
Trigger: TGCCAAGTGACGGGCAGCTCAGGTACCCTGGAGGCT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTGGAGCCGTTGGGGCTaGTGTGGACGTTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCWSRWG*CGRCPP
Trigger: TGGAGGACAACGTCCACATCAGCCCCAACGGCTCCA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTGGAGCCGTTGGGGCTaGTGTGGACGTTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRWSRWG*CGRCPP
Trigger: TGGAGGACAACGTCCACATCAGCCCCAACGGCTCCA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAACAGATGTACTGTCCTaGGTCCTGCTGGGCCACCCG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLTDVLS*VLLGHP
Trigger: CGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCCTTGGACCAGGACTTaGGCAAAGGCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTPWTRT*AKASAE
Trigger: CTCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGTCAGAGATCCTTGAGTaGGGCTTCGTAACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVSEILE*GFVTGS
Trigger: TGACCCTGTTACGAAGCCTCACTCAAGGATCTCTGA...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTCTGGAAGTCCCCGCTaGCCACGTCTCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASSGSPR*PRLRCR
Trigger: TCGGCAGCGGAGACGTGGGCAGCGGGGACTTCCAGA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCGGAAGCGCAGGCTaGTCTGGCACACGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPPGSAG*SGTRWS
Trigger: TGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCACCAGCTGGAACTCCTaGAGGGCGGGGTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTTSWNS*RAGSIC
Trigger: GCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGGAGTCCACCTTGTTaGCCAGAAACTGCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWRSPPC*PETAWV
Trigger: TACCCAAGCAGTTTCTGGGCAACAAGGTGGACTCCT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCACCAGGGGCTGTCTGTaGAGGGGCGCAGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSTRGCL*RGAELG
Trigger: GCCCAGTTCTGCGCCCCTGCACAGACAGCCCCTGGT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGGCCCTGGCTGGGGTTaGCATAGTAACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRGPGWG*HSNLGH
Trigger: GTGCCCCAGGTTACTATGGCAACCCCAGCCAGGGCC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCAGGAAGAGGACTCAATaGGGATGGGTGACGTGCTAC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPARKRTQ*GWVTCY
Trigger: GTAGCACGTCACCCATCCGCATTGAGTCCTCTTCCT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGCATGGGCCTGTCCTTaGACCACACAATTTAGATCC +
Preference number: 4 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWAWACP*TTQFRS
Trigger: GGATCTAAATTGTGTGGTGCAAGGACAGGCCCATGC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGACAGGAGACACCTGGTaGAGCCGCAGCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRTGDTW*SRSREP
Trigger: TGGCTCCCTGCTGCGGCTGCACCAGGTGTCTCCTGT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCCAGGGTACCTGAGCTaGCCGTCACTTGGCATGAGT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSPGYLS*PSLGMS
Trigger: ACTCATGCCAAGTGACGGGCAGCTCAGGTACCCTGG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCTTGAAGGAAGCCTCATaGTCAGGGTGGGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPALKEAS*SGWELP
Trigger: TGGTAGCTCCCACCCTGAGCATGAGGCTTCCTTCAA...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACTGGCATCTTGGCCCTaGTGTACCGTGCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLLASWP*CTVLLG
Trigger: ACCCAGCAGCACGGTACAGCAGGGCCAAGATGCCAG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTGGTGGGTGGAGGGTTaGCCGTGGCTGAGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCWWVEG*PWLSSV
Trigger: TACACTGCTCAGCCACGGGCAACCCTCCACCCACCA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCTTCTATCCGGTGCTaGCAGGGCAGTGGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKPSIRC*QGSGAR
Trigger: GCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTACGGTGGCTTCAGTGTaGCCAGCAGAGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCTVASV*PAELVA
Trigger: CGCCACCAACTCTGCTGGGCACACTGAAGCCACCGT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTACCAGGTTCCCTGGCTaGGCCGAGGTATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSTRFPG*AEVCSG
Trigger: TCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGT...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCAGGCGTAGCTCATGGTaGATGTTGGTGAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLRRSSW*MLVRAG
Trigger: ACCGGCTCTCACCAACATGCACCATGAGCTACGCCT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGAGGCCATCGGCTGTaGTGGTCCGAACCTCGAATT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSGGHRL*WSEPRI
Trigger: AATTCGAGGTTCGGACCAGCACAGCCGATGGCCTCC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCAGACTCTTGGGAACTaGGGCACTGTGCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRQTLGN*GTVPRR
Trigger: ACGCCTGGGCACAGTGCCCCAGTTCCCAAGAGTCTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCGTCACAGTGGAAGCTaGCTGGGATGCAGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCRHSGS*LGCSGW
Trigger: CCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACACGCCCACCCTCGCTaGTCATTGTCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLHAHPR*SLSPWD
Trigger: ATCCCAGGGTGACAATGACCAGCGAGGGTGGGCGTG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGACAGGTCGACCAGCTaGAACTCCTGCAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVDRSTS*NSCRAG
Trigger: CCCCGCCCTGCAGGAGTTCCAGCTGGTCGACCTGTC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGCCCAGAAAGCATCGTaGACAAGGAAGCGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSAQKAS*TRKRRD
Trigger: GTCTCGCCGCTTCCTTGTCCACGATGCTTTCTGGGC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGGCACGCGGGTGAAGTaGGCATCGCAGCTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRGTRVK*ASQLSQ
Trigger: TTGCGAGAGCTGCGATGCCCACTTCACCCGCGTGCC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGCACAATTTCCTGGGTaGTGGGCCTGCACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCAQFPG*WACTSR
Trigger: GCGGGAAGTGCAGGCCCACCACCCAGGAAATTGTGC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTTTTGCTTGCTCAGGTaGAACGAGCCGTCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLFCLLR*NEPSEH
Trigger: GTGCTCGGACGGCTCGTTCCACCTGAGCAAGCAAAA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGGCTGGCAGTCCTGTaGTGTGCCCCGTTGGGCATC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGLAVL*CAPLGI
Trigger: GATGCCCAACGGGGCACACCACAGGACTGCCAGCCC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCAGGGGCTCCGTAGCATaGGCAGGGCTGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVRGSVA*AGLAVL
Trigger: CAGGACTGCCAGCCCTGCCCATGCTACGGAGCCCCT...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGAGTGGGCTGCCCTGTaGCCCGGCTGTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASEWAAL*PGCVGE
Trigger: CTCTCCTACACAGCCGGGCCACAGGGCAGCCCACTC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCTGGAGGGCCCTGGCTaGGCCACTTCTAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKLEGPG*ATSRLT
Trigger: CGTGAGCCTAGAAGTGGCCCAGCCAGGGCCCTCCAG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGTAGAAGTAGTGTGGTaGGCTCCCACTGACCTGGCA +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLVEVVW*APTDLA
Trigger: TGCCAGGTCAGTGGGAGCCCACCACACTACTTCTAC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGACCCTCAGTCACAGTaGAGGATGAGGCCTCAATTC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPADPQSQ*RMRPQF
Trigger: GAATTGAGGCCTCATCCTCCACTGTGACTGAGGGTC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCATGTGACCTGCGCGTaGGCCTGTCCTGCCACCACA +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRHVTCA*ACPATT
Trigger: TGTGGTGGCAGGACAGGCCCACGCGCAGGTCACATG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTCCACAGGAGACACCTaGTGCAGCCGCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTSTGDT*CSRSRE
Trigger: CTCCCTGCTGCGGCTGCACCAGGTGTCTCCTGTGGA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTTGGTGGGGAGACACTaGGCACATGGGATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCLVGRH*AHGMAL
Trigger: GAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGCGTCTGATGATGAGTaGGCAGGCTACCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLASDDE*AGYPLA
Trigger: AGCGAGGGGGTAGCCTGCCCACTCATCATCAGACGC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGCATGGGCTTGCCCTaGTACCACGCACTTCAGATC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSGMGLP*YHALQI
Trigger: GATCTGAAGTGCGTGGTACCAGGGCAAGCCCATGCC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTTGTGCCATGTGACCTaGGCATGGGCTTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSLCHVT*AWACPG
Trigger: ACCAGGGCAAGCCCATGCCCAGGTCACATGGCACAA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGTTGTCCTCCAGCTCTTaGTCCCGAATCTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVLSSSS*SRIFHS
Trigger: TGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAA...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCAGGCTCCATGGTTGCTaGGCCGGGTGCCCACGATGG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSRLHGC*AGCPRW
Trigger: CCATCGTGGGCACCCGGCCCAGCAACCATGGAGCCT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCATACCATAGACATTaGAAGCCACGCAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPYHRH*KPRSGR
Trigger: CCTACCGCTGCGTGGCTTCCAATGTCTATGGTATGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCGATCAGCTGGGCAGTaGCCTGGGCTTGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRSAGQ*PGLVPK
Trigger: CTTGGGGACAAGCCCAGGCCACTGCCCAGCTGATCG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAACTAGCAGCAGCACGTaGGACTGGGTGGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPTSSST*DWVVPA
Trigger: TGCGGGCACCACCCAGTCCCACGTGCTGCTGCTAGT...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGCCAGAGGTGTGGGGTaGCGGATAGTGGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPARGVG*RIVAMP
Trigger: TGGCATGGCCACTATCCGCCACCCCACACCTCTGGC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCCACAGGCCTCGGGGTaGCAGTGCAGGGCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKPQASG*QCRACE
Trigger: TTCGCAAGCCCTGCACTGCCACCCCGAGGCCTGTGG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCCGCAGGCATGCATGTaGCGCCATTCTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRPQACM*RHSGRA
Trigger: AGCCCTGCCAGAATGGCGCCACATGCATGCCTGCGG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCATGGTTCATGCAGCTaGCACGGGTTCTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAHGSCS*HGFSSC
Trigger: ACATGAGGAGAACCCGTGCCAGCTGCATGAACCATG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCAAGAGAACTTGCCCCTaGTCAGTGTGGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAKRTCP*SVWPHL
Trigger: CAGATGTGGCCACACTGACCAGGGGCAAGTTCTCTT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACAGGGGCTGTGGAGGTaGGGCTCCAGGCCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGQGLWR*GSRPGR
Trigger: ACGGCCCGGCCTGGAGCCCCACCTCCACAGCCCCTG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACATACCGGCTCGCTGTaGCAGTCTCTGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLHTGSL*QSLCPQ
Trigger: CTGAGGACACAGAGACTGTCACAGCGAGCCGGTATG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACCATGCAGAAGCACTTaGGGCAGCCGTCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLPCRST*GSRPGF
Trigger: AAAACCCGGACGGCTGCCTCAAGTGCTTCTGCATGG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCTTGGAAGGGCACTATaGAGTTGCTGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRLGRAL*SCWAGQ
Trigger: CTGGCCAGCCCAGCAACTTCATAGTGCCCTTCCAAG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGGTGGGCAAAGTTGCTaGAAGAGAGGCGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPGGQSC*KRGGPH
Trigger: ATGGGGCCCGCCTCTCTTTCAGCAACTTTGCCCACC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGATGCCGTTGTGGATCTaGGCCTTCGCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRMPLWI*AFAGSW
Trigger: CCAGCTTCCTGCGAAGGCTCAGATCCACAACGGCAT...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTGCCCCTCAGCCACGTaGGAGGAAGAGGACTCAATG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCCPSAT*EEEDSM
Trigger: CATTGAGTCCTCTTCCTCTCACGTGGCTGAGGGGCA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTTCGGACTGGAGGGATaGCCCCAGGTGCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSFGLEG*PQVQCL
Trigger: CAGGCACTGCACCTGGGGTCATCCCTCCAGTCCGAA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCAGGAGATCTGGGGGTaGGTCTGCCCAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCQEIWG*VCPETR
Trigger: CCTTGTTTCTGGGCAGACTCACCCCCAGATCTCCTG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCTTGAGCCATGTACCTaGTGCCGGGCAGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASLEPCT*CRAGRL
Trigger: CAGCCTCCCTGCCCGGCATCAGGTACATGGCTCAAG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCGGGAGCCCACAATCTaGTGCCGGCTGGGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSREPTI*CRLGKL
Trigger: CAGCTTACCCAGCCGGCATCAGATTGTGGGCTCCCG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTCTGCTGGGGTCACTTaGGGGATCCGGAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKSAGVT*GIRRRE
Trigger: CTCCCGCCTCCGGATCCCTCAAGTGACCCCAGCAGA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACAGAGGCCTCGATGGTaGCCAGGACAGAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPQRPRW*PGQKPP
Trigger: TGGAGGCTTCTGTCCTGGTCACCATCGAGGCCTCTG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGAAGCCTGGATGGACTaGTGTGGAGGCGTCACTACC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHREAWMD*CGGVTT
Trigger: GGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGGCCTCACAGGTGTATaGGCCCTGGTCTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTGLTGV*ALVCLL
Trigger: AAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAGCTGGAACTCCTaGAGGGCGGGGTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASTSWNS*RAGSIC
Trigger: GCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCTCCAGCATGCCTCGTaGCAGTTCATAGCGCACCTT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSLQHAS*QFIAHL
Trigger: AAGGTGCGCTATGAACTGGCACGAGGCATGCTGGAG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCAGGCTGGATGGGGTTaGCTTCATATCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRQAGWG*LHIQGH
Trigger: GTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCATGCCCATCAGGCCGCTaGCACGCTTGCTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPCPSGR*HACSWK
Trigger: CTTCCAAGAGCAAGCGTGGCAGCGGCCTGATGGGCA...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCCTGTCAGTTGGCTGTTaGGTTGAGGGTTCACCAGAG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLLSVGC*VEGSPE
Trigger: CTCTGGTGAACCCTCAACGCAACAGCCAACTGACAG...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACTGTGCGGCCTTCATaGACCTGGGTCCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASTVRPS*TWVLSG
Trigger: CCCCGAGAGGACCCAGGTGCATGAAGGCCGCACAGT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGCCCATTGCCTGCCCTaGACACATATTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLAHCLP*THILQH
Trigger: ATGCTGGAGAATATGTGTGCAGGGCAGGCAATGGGC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTGGCTTCCTGCCCATTaGCTGCCCTGCACACATATT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLWLPAH*LPCTHI
Trigger: AATATGTGTGCAGGGCAGGCAATGGGCAGGAAGCCA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACAGGAGACACCTGGTaGAGCCGCAGCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASTGDTW*SRSREP
Trigger: TGGCTCCCTGCTGCGGCTGCACCAGGTGTCTCCTGT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGAGGGGCTGAGGGTCTaGTGGATGGTGACAAGGATA +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSEGLRV*WMVTRI
Trigger: TATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTC...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGCCGGCTGGGTAAGCTaGCTCCGCGCTTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKAGWVS*LRACTR
Trigger: CCTGGTACAAGCGCGGAGGCAGCTTACCCAGCCGGC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACTGGCATCTTGGCCCTaGTGTACCGTGCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPLASWP*CTVLLG
Trigger: ACCCAGCAGCACGGTACAGCAGGGCCAAGATGCCAG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTTCCCCATCTTCACATaGACAGGGCCCTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTFPIFT*TGPSGS
Trigger: GCTCCCCGAGGGCCCTGTGCATGTGAAGATGGGGAA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTTGCCTTCTATCCGGTaGTGCCAGGGCAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVLPSIR*CQGSGA
Trigger: CGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGTTGCCTTCTATCCGGTaGTGCCAGGGCAGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKLPSIR*CQGSGA
Trigger: CGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAA...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGGTGTCCCCCGACTTTaGTCCATGTCACCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLGVPRL*SMSPEA
Trigger: AGCCTCAGGTGACATGGAGCAAAGTCGGGGGACACC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGACAGCGGTACTGTCCTaGATCAGCCAGCTCCACGTG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRTAVLS*ISQLHV
Trigger: CACGTGGAGCTGGCTGATGCAGGACAGTACCGCTGT...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGCTTTGACCTTGCCCTaGCGGTTGGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPALTLP*RLVAVH
Trigger: GTGCACTGCCACCAACCGGCAGGGCAAGGTCAAAGC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCCTCTCGGAACTCCTTaGCACTTGCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSPLGTP*HLHPPA
Trigger: AGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACTGGATGGACTGCTGTaGAGGCGTCACTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPLDGLL*RRHYLG
Trigger: CCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGCCCAGAAAGCATCGTaGACAAGGAAGCGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLAQKAS*TRKRRD
Trigger: GTCTCGCCGCTTCCTTGTCCACGATGCTTTCTGGGC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGCCGGCCAGACTCGTaGACCCAGTGTTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGRPDS*TQCSSE
Trigger: CTCAGAGGAACACTGGGTCCACGAGTCTGGCCGGCC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCACTCAGCCCCACACTaGCCATCTTGGTGTTATACA +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAHSAPH*PSWCYT
Trigger: TGTATAACACCAAGATGGCCAGTGTGGGGCTGAGTG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCCAGGGTCACAGGAGCTaGCATGGCCATTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLQGHRS*HGHCNY
Trigger: GTAATTGCAATGGCCATGCCAGCTCCTGTGACCCTG...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGGAAGCGTCGATGTATaGGCAGGGACAGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASGSVDV*AGTGPA
Trigger: TGCCGGCCCTGTCCCTGCCCATACATCGACGCTTCC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTCCCGCCAGGCTGGATaGGGTTGCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRSRQAG*GCLHIQ
Trigger: CTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGAGGGCTGGCCCTGGCTaGGGTTGCCATAGTAACCTG +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRRAGPG*GCHSNL
Trigger: CAGGTTACTATGGCAACCCCAGCCAGGGCCAGCCCT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTAGCCTTCCGGGTTGCTaGCACTCAGGTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSLPGC*HSGGSG
Trigger: ACCACTTCCACCTGAGTGCCAGCAACCCGGAAGGCT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTGGAGGGCCCTGGCTaGGCCACTTCTAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKLEGPG*ATSRLT
Trigger: CGTGAGCCTAGAAGTGGCCCAGCCAGGGCCCTCCAG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAGCCAACATAGCCTaGGGGGCAGCGACACTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLQANIA*GAATLF
Trigger: GAAGAGTGTCGCTGCCCCCCAGGCTATGTTGGCTTG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTACATGTTCTCTGGGTTaGTCAGCGGGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCTCSLG*SAGRHR
Trigger: CCTGTGCCTGCCCGCTGACCAACCCAGAGAACATGT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGGTGCCCGCGTCACTTaGCTGCACATTGCGAATGGT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLGARVT*LHIANG
Trigger: ACCATTCGCAATGTGCAGCCAAGTGACGCGGGCACC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCAGTGTGGCTGTGCCCTaGTCCATAGCGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLSVAVP*SIANML
Trigger: CAACATGTTCGCTATGGACCAGGGCACAGCCACACT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGCTGTGGAGGGTGTATaGAGGCCACAGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVAVEGV*RPQGQW
Trigger: CCACTGCCCCTGTGGCCTCCATACACCCTCCACAGC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGGGTGGGGTTCCCCGTaGCGCTACAGCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKGWGSP*RYSGTQ
Trigger: CTGAGTTCCGCTGTAGCGCCACGGGGAACCCCACCC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGCATCAATGTTGTTGTTaGCTCGGCACACATACTCGC +
Preference number: 4 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVHQCCC*LGTHTR
Trigger: GCGAGTATGTGTGCCGAGCCAACAACAACATTGATG...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGCGTCTGATGATGAGTaGGCAGGCTACCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTASDDE*AGYPLA
Trigger: AGCGAGGGGGTAGCCTGCCCACTCATCATCAGACGC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTTCAGTCTCAGCATGTaGCCATGGACCTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSFSLSM*PWTWCP
Trigger: TGGGCACCAGGTCCATGGCCACATGCTGAGACTGAA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGCTTGGACCAGTGGATaGTGGGTGGAGGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKAWTSG*WVEGCP
Trigger: CGGGCAACCCTCCACCCACCATCCACTGGTCCAAGC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTTGGGCACAGCACAGTaGAACTCAACGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRLGTAQ*NSTLAP
Trigger: AGGGGCCAGCGTTGAGTTCCACTGTGCTGTGCCCAA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGGCAGGGTCGGTCCTaGCAAGTAGGGCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASWQGRS*QVGQWE
Trigger: CTCCCACTGCCCTACTTGCCAGGACCGACCCTGCCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTCGGAATCTTGGCACTaGCCCCCATTCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSESWH*PPFWQG
Trigger: ACCCTGCCAGAATGGGGGCCAGTGCCAAGATTCCGA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGCCGGTTCACACAAGTaGCGTCCGGCCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKAGSHK*RPAHRP
Trigger: AGGCCTGTGGGCCGGACGCCACTTGTGTGAACCGGC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGTAGCCTCGACCGTCTaGCCGGTTCACACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPVASTV*PVHTSG
Trigger: GCCACTTGTGTGAACCGGCCAGACGGTCGAGGCTAC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGTAGCCTCGACCGTCTaGCCGGTTCACACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTVASTV*PVHTSG
Trigger: GCCACTTGTGTGAACCGGCCAGACGGTCGAGGCTAC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTAAGGTCAGTGGCTCGTaGCTCCGCAGAACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCKVSGS*LRRTAR
Trigger: TCTGGCTGTTCTGCGGAGCCACGAGCCACTGACCTT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCGCAGGCATGCATGTaGCGCCATTCTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSPQACM*RHSGRA
Trigger: AGCCCTGCCAGAATGGCGCCACATGCATGCCTGCGG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTGCCCCTGGTCAGTGTaGCCACATCTGGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSCPWSV*PHLGHH
Trigger: GTGGTGCCCCAGATGTGGCCACACTGACCAGGGGCA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CAA 72 bp AGTGGCTCAGGCCATGGCCACACCCCCTCGTTCAGTTaGACAGTGAGGCACCAGGTGGTAACTGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGSGHGHTPSFS*TVRHQVVTALT
Trigger: TGTGAGCGCAGTTACCACCTGGTGCCTCACTGTCAAACTGAACGAGGGGGTGTGGCCATGGCCTGAGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
3UTR CAA 72 bp CATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTaGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HCWALPSDSGKE*VSLAAPEGRAL
Trigger: CAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCAGTGGCTACGCAGGTaGAAGTCACTGTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSQWLRR*KSLSGP
Trigger: GGGGCCAGACAGTGACTTTCACCTGCGTAGCCACTG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCAGCCACATCCATGCTaGTACCAGAGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRQPHPC*YQRPCS
Trigger: AGAGCAGGGTCTCTGGTATCAGCATGGATGTGGCTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGTGGGCAAAGTTGCTaGAAGAGAGGCGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGGQSC*KRGGPH
Trigger: ATGGGGCCCGCCTCTCTTTCAGCAACTTTGCCCACC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCTCCACTGTCACTGTaGTGGGCTTGCTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSPPLSL*WACWEP
Trigger: AGGCTCCCAGCAAGCCCATCACAGTGACAGTGGAGG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCGGCAGGTTCGATGGTaGCCAGGACAGAGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRQVRW*PGQRFL
Trigger: CAGAAACCTCTGTCCTGGTCACCATCGAACCTGCCG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACAGGAGATCTGGGGGTaGGTCTGCCCAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPQEIWG*VCPETR
Trigger: CCTTGTTTCTGGGCAGACTCACCCCCAGATCTCCTG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGCGCCGTTACTGACGTaGCACACATACTCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTAPLLT*HTYSPE
Trigger: CTCCGGAGAGTATGTGTGTCACGTCAGTAACGGCGC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGCGCCGTTACTGACGTaGCACACATACTCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRAPLLT*HTYSPE
Trigger: CTCCGGAGAGTATGTGTGTCACGTCAGTAACGGCGC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCAGAGGCCTCGATGGTaGCCAGGACAGAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKQRPRW*PGQKPP
Trigger: TGGAGGCTTCTGTCCTGGTCACCATCGAGGCCTCTG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCGAGGCCAAAGGAGATaGAATCTGGCTGTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSRGQRR*NLAVCW
Trigger: CCAACAGACAGCCAGATTTCATCTCCTTTGGCCTCG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAACTCCGTCTCCGTaGAGACTCTTGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLQTPSP*RLLGTG
Trigger: CCCAGTTCCCAAGAGTCTGCACGGAGACGGAGTTTG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGGAAGCTGGCTGGGATaGAGCGGTTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVGSWLG*SGWWRH
Trigger: GTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGCACCGGCTCCAGCATaGCTCGTGCCAGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASAPAPA*LVPVHS
Trigger: GCTATGAACTGGCACGAGGCATGCTGGAGCCGGTGC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCAGCTGGCATGGCCATTaGAATTACAGCCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLSWHGH*NYSQSK
Trigger: CTTGCTCTGGCTGTAATTGCAATGGCCATGCCAGCT...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTGCCCATCAGGCCGCTaGCACGCTTGCTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVCPSGR*HACSWK
Trigger: CTTCCAAGAGCAAGCGTGGCAGCGGCCTGATGGGCA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCTGGCAAGCGCAGGATaGCGTTGTGGATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRLASAG*RCGSEP
Trigger: AGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGGTGGGTGGAGGGTTaGCCGTGGCTGAGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASWWVEG*PWLSSV
Trigger: TACACTGCTCAGCCACGGGCAACCCTCCACCCACCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTACTGTCCTGAGTCCTaGTGGGCCACCCGGGGAATG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSYCPES*WATRGM
Trigger: CATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGGAGGCCATCGGCTGTaGTGGTCCGAACCTCGAATT +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPGGHRL*WSEPRI
Trigger: AATTCGAGGTTCGGACCAGCACAGCCGATGGCCTCC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTAGCGCTGTTATCCGATaGCACTCGCCGTCATTGATG +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSSAVIR*HSPSLM
Trigger: CATCAATGACGGCGAGTGGCATCGGATAACAGCGCT...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGAGGCGTCACTACCTaGGGAGGCATGCAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGGVTT*GGMQPN
Trigger: GTTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCTCCAGCACGCCGTCTaGAATGCCGAACACCATGCC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASLQHAV*NAEHHA
Trigger: GGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTCACAGGAGCTGGCATaGCCATTGCAATTACAGCCA +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLSQELA*PLQLQP
Trigger: TGGCTGTAATTGCAATGGCCATGCCAGCTCCTGTGA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACCTTCTGTGTTGTGCTaGCAATTCAGGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLPSVLC*QFRQWP
Trigger: CGGCCACTGCCTGAATTGCCAGCACAACACAGAAGG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGTCTCTGAGTGGCCATaGCAGTTACAGCGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLVSEWP*QLQRSQ
Trigger: CTGTGAGCGCTGTAACTGCCATGGCCACTCAGAGAC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGAGCCTTCCGGGTTGCTaGCACTCAGGTGGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRSLPGC*HSGGSG
Trigger: ACCACTTCCACCTGAGTGCCAGCAACCCGGAAGGCT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGGCCTCCTTGTACATTaGGGTCACCCTCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCGLLVH*GHPHSL
Trigger: CAGGCTATGAGGGTGACCCCAATGTACAAGGAGGCC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCCAGTAGAAGTAGTGTaGTGGGCTCCCACTGACCTG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCPVEVV*WAPTDL
Trigger: CAGGTCAGTGGGAGCCCACCACACTACTTCTACTGG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGGTGCCCGCGTCACTTaGCTGCACATTGCGAATGGT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRGARVT*LHIANG
Trigger: ACCATTCGCAATGTGCAGCCAAGTGACGCGGGCACC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGATGAGAGAGGTCTCCTaGGAGCCAGCGCCGTTACTG +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRMREVS*EPAPLL
Trigger: CAGTAACGGCGCTGGCTCCCAGGAGACCTCTCTCAT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGACTGGGCACATGGGATaGCCCTCTGCTCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRTGHMG*PSALDG
Trigger: ACCATCGAGAGCAGAGGGCCATCCCATGTGCCCAGT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCCTCAATTCTCATTGGTaGGGAGACACTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLLNSHW*GDTGHM
Trigger: CATGTGCCCAGTGTCTCCCCACCAATGAGAATTGAG...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGAGCTGCCCGTCACTTaGCATGAGTACTCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPELPVT*HEYSPE
Trigger: CTCTGGCGAGTACTCATGCCAAGTGACGGGCAGCTC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGCCGTTGGGGCTGATGTaGACGTTGTCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRPLGLM*TLSSSS
Trigger: AGAGCTGGAGGACAACGTCCACATCAGCCCCAACGG...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGTGGAGGGTTGCCCGTaGCTGAGCAGTGTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTVEGCP*LSSVKW
Trigger: CCACTTTACACTGCTCAGCCACGGGCAACCCTCCAC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTGTGCCCAGCAGAGTTaGTGGCGTTACAGATGTACT +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLCAQQS*WRYRCT
Trigger: AGTACATCTGTAACGCCACCAACTCTGCTGGGCACA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGGGTGCCACGCTCATTaGGCACAGCACAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTGCHAH*AQHSGT
Trigger: AGTTCCACTGTGCTGTGCCCAATGAGCGTGGCACCC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCAGACATATGTCCCTTaGCAGCTCTGGTCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAQTYVP*QLWSKF
Trigger: GAACTTAGACCAGAGCTGCCAAGGGACATATGTCTG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGATCAGCTGGGCAGTaGCCTGGGCTTGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKRSAGQ*PGLVPK
Trigger: CTTGGGGACAAGCCCAGGCCACTGCCCAGCTGATCG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGACTAGCAGCAGCACGTaGGACTGGGTGGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKTSSST*DWVVPA
Trigger: TGCGGGCACCACCCAGTCCCACGTGCTGCTGCTAGT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTAATCTGGCTGTCTGTTaGCTAGGTTGGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSNLAVC*LGWWDS
Trigger: GGAGTCCCACCAACCTAGCCAACAGACAGCCAGATT...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAAACAGGGTCACGGTGTaGAACTGGCCTAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPNRVTV*NWPRAR
Trigger: TCTGGCCCTAGGCCAGTTCCACACCGTGACCCTGTT...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTACTCAGCCCAGCCTTaGGGATGGCACCGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTYSAQP*GWHRSQ
Trigger: CTGACTACGGTGCCATCCCCAAGGCTGGGCTGAGTA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGCCTTGTTGGCAGCGTaGACCAGAGAAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKALLAA*TREARQ
Trigger: CTGCCTGGCTTCTCTGGTCCACGCTGCCAACAAGGC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGCCGAGGCCATCTCCTaGTGCATCATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKAEAIS*CIICQQ
Trigger: CTGCTGGCAGATGATGCATCAGGAGATGGCCTCGGC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCACAGCGCCACAACTTaGGAGCACAGTGCCCATTTT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRHSATT*EHSAHF
Trigger: AAAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAGGCTCACAGGTCTCTaGGTGGCCATGGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRLTGL*VAMAVT
Trigger: TGTAACTGCCATGGCCACTCAGAGACCTGTGAGCCT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTGCCCCTCAGCCACGTaGGAGGAAGAGGACTCAATG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVCPSAT*EEEDSM
Trigger: CATTGAGTCCTCTTCCTCTCACGTGGCTGAGGGGCA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGACAGATGTACTGTCCTaGGTCCTGCTGGGCCACCCG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKTDVLS*VLLGHP
Trigger: CGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGACGGAGGGCAAGGCTTaGACGATCAGCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKTEGKA*TISWAV
Trigger: CACTGCCCAGCTGATCGTTCAAGCCTTGCCCTCCGT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTTGCTCCATGTCACCTaGGGCTTAGGGTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVLLHVT*GLGSPR
Trigger: CCTGGGTGACCCTAAGCCTCAGGTGACATGGAGCAA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGATAGGCAAAGGCTTTaGCCTTGCCCTGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSDRQRL*PCPAGW
Trigger: CCAACCGGCAGGGCAAGGTCAAAGCCTTTGCCTATC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAAGTAGGGTGTCTGGGTaGAGTAGGGTATCACTCGCT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLSRVSG*SRVSLA
Trigger: AGCGAGTGATACCCTACTTCACCCAGACACCCTACT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTTCAGGCAGGCTCCTTaGGAAACTGTTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRFRQAP*ETVTRE
Trigger: CTCCCTGGTAACAGTTTCTCAAGGAGCCTGCCTGAA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCATCAGACATGTCCCTaGAGTCAGGCCTCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSHQTCP*SQASGH
Trigger: GTGACCGGAGGCCTGACTGCAGGGACATGTCTGATG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAACAGTCCGCTCCCAGTaGGAGTGTAGCCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGTVRSQ*ECSPGH
Trigger: GTGCCCCGGGCTACACTCGCACTGGGAGCGGACTGT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACACTCTGGCTCCGCTaGTCCTCCACTGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASTLWLR*SSTVTV
Trigger: CACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGCCCATTGCCTGCCCTaGACACATATTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCAHCLP*THILQH
Trigger: ATGCTGGAGAATATGTGTGCAGGGCAGGCAATGGGC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTTCAGATCCAGACTCTaGCCCTCCGACACGTGGGAG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSFRSRL*PSDTWE
Trigger: CTCCCACGTGTCGGAGGGGCAGAGTCTGGATCTGAA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAACGATCAGCTCCACTTaGTTCTGTGCTGTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLTISST*FCAVPR
Trigger: CCTAGGCACAGCACAGAAGCAAGTGGAGCTGATCGT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCACCAGGTTCCCTGGCTaGGCCGAGGTATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVTRFPG*AEVCSG
Trigger: TCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGT...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGGTGTCCCCCGACTTTaGTCCATGTCACCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKGVPRL*SMSPEA
Trigger: AGCCTCAGGTGACATGGAGCAAAGTCGGGGGACACC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGTGGGACTCCGCTTCTaGCCATTGTACAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPVGLRF*PLYSSI
Trigger: GATGCTGCTGTACAATGGGCAGAAGCGGAGTCCCAC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGTGGCAGTGCAGGGCTTaGGAATGTTCACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKWQCRA*ECSQRL
Trigger: CAGCCGCTGTGAACATTCGCAAGCCCTGCACTGCCA...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAAGGCGTAGCTCATGGTaGATGTTGGTGAGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPRRSSW*MLVRAG
Trigger: ACCGGCTCTCACCAACATGCACCATGAGCTACGCCT...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACATCATTGCCTCCACTaGCTTCAGGGTGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPHHCLH*LQGASL
Trigger: CAGACTGGCACCCTGAAGGCAGTGGAGGCAATGATG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCACAGTGGAAGCTGGCTaGGATGCAGCGGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVTVEAG*DAAVGG
Trigger: TCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGT...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGACAGTGGAAGCTGGCTaGGATGCAGCGGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKTVEAG*DAAVGG
Trigger: TCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGCCACGCGAGTTCATaGCCTCACAGGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASCHASS*PHRCMR
Trigger: GCGCATACACCTGTGAGGCCATGAACTCGCGTGGCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTCCAGCACGCCGTCTaGAATGCCGAACACCATGCC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKLQHAV*NAEHHA
Trigger: GGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGACAGGTCGACCAGCTaGAACTCCTGCAGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGDRSTS*NSCRAG
Trigger: CCCCGCCCTGCAGGAGTTCCAGCTGGTCGACCTGTC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTATGCCCAGAAACTGCTTaGGTAGGGCCCAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLCPETA*VGPRKH
Trigger: ATGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCA...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTTCAGAGTTCCAGGATaGGTGGGGGTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVFRVPG*VGVWPR
Trigger: TCGAGGCCACACCCCCACCCATCCTGGAACTCTGAA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCACACTGGCCATCTTaGTGTTATACACTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPHWPS*CYTLSV
Trigger: TACAGACAGTGTATAACACCAAGATGGCCAGTGTGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCACTTCCCGCCAGGCTaGATGGGGTTGCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTHFPPG*MGLPSY
Trigger: ATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCATTTTGCTTGCTCAGGTaGAACGAGCCGTCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPFCLLR*NEPSEH
Trigger: GTGCTCGGACGGCTCGTTCCACCTGAGCAAGCAAAA...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCTGTAGTGCTGGCTaGGAAGCCACCAACATGATG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPPCSAG*EATNMM
Trigger: CATCATGTTGGTGGCTTCCCAGCCAGCACTACAGGG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGACATGTTCTCTGGGTTaGTCAGCGGGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKTCSLG*SAGRHR
Trigger: CCTGTGCCTGCCCGCTGACCAACCCAGAGAACATGT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTAGTGTGGCTGTGCCCTaGTCCATAGCGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSVAVP*SIANML
Trigger: CAACATGTTCGCTATGGACCAGGGCACAGCCACACT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGGTGGGGTTCCCCGTaGCGCTACAGCGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGGWGSP*RYSGTQ
Trigger: CTGAGTTCCGCTGTAGCGCCACGGGGAACCCCACCC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTAGCAGCTGTAATGGCTaGGATGAGCAGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSSCNG*DEQCGD
Trigger: ATCCCCACACTGCTCATCCCAGCCATTACAGCTGCT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTGCCTGTGGGGCTGGTaGCCACACAGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKCLWGW*PHRGRS
Trigger: GCTTCTACCTCTGTGTGGCCACCAGCCCCACAGGCA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGAGCCCAGGACGACATaGCACACATACTCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASEPRTT*HTYSPE
Trigger: CTCAGGCGAGTATGTGTGCCATGTCGTCCTGGGCTC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACATGTGACTTGGGCATaGGCCTGTCCTTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPHVTWA*ACPCTT
Trigger: TGTGGTGCAAGGACAGGCCCATGCCCAAGTCACATG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTCTCTCCAGAGTCAGTTaGGGTCACCTGGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCLSRVS*GHLEKS
Trigger: AGACTTCTCCAGGTGACCCCAACTGACTCTGGAGAG...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACTCTCCAGAGTCAGTTaGGGTCACCTGGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLLSRVS*GHLEKS
Trigger: AGACTTCTCCAGGTGACCCCAACTGACTCTGGAGAG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAGGATAGAAGCTTCTTaGGTGCCCGAGCCACTGACG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTRIEAS*VPEPLT
Trigger: CGTCAGTGGCTCGGGCACCCAAGAAGCTTCTATCCT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGAGCTGCCCGTCACTTaGCATGAGTACTCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVELPVT*HEYSPE
Trigger: CTCTGGCGAGTACTCATGCCAAGTGACGGGCAGCTC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGCCTCATGCTCAGGGTaGGAGCTACCAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKASCSG*ELPATW
Trigger: CCAAGTGGCTGGTAGCTCCCACCCTGAGCATGAGGC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCATGCAGGACAACGGTaGCTTCAGTGTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASHAGQR*LQCAQQ
Trigger: CTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAGTGGAACTCAACGCTaGCCCCTATGTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTSGTQR*PLCSGS
Trigger: AGACCCGGAACATAGGGGCCAGCGTTGAGTTCCACT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGGGTGCCACGCTCATTaGGCACAGCACAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKGCHAH*AQHSGT
Trigger: AGTTCCACTGTGCTGTGCCCAATGAGCGTGGCACCC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTCAGCCAGCTCCACGTaGGCAATCCTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRSASST*AILMML
Trigger: AAGCATCATCAGGATTGCCCACGTGGAGCTGGCTGA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGGCCACCATTCAGACATaGTTCATGCAGCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRATIQT*FMQLAR
Trigger: CCGTGCCAGCTGCATGAACCATGTCTGAATGGTGGC...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGCCTTGTTGGCAGCGTaGACCAGAGAAGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKALLAA*TREARQ
Trigger: CTGCCTGGCTTCTCTGGTCCACGCTGCCAACAAGGC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTCCTCACCGTCTACTTaGATGGAGCCTCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVSSPST*MEPLWP
Trigger: GGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAACTCCTCTCGGAAGATaGTCTCATAGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLTPLGR*SHSSSS
Trigger: AGAGGAGGAGCTATGAGATCATCTTCCGAGAGGAGT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGTGTAGCTGGGGCCTaGATGGGGGCTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGGVAGA*MGAVKD
Trigger: GTCCTTCACAGCCCCCATTCAGGCCCCAGCTACACC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGAGGAAGACTCTATTCTaGTGGGTGCAGGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKRKTLF*WVQGWR
Trigger: CCGCCAGCCCTGCACCCATCAGAATAGAGTCTTCCT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGCCCGTCACTTGGCATaGGTACTCGCCAGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGARHLA*VLARVR
Trigger: GCGGACTCTGGCGAGTACTCATGCCAAGTGACGGGC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAAGCCTCCAGGGTACCTaGGCTGCCCGTCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGSLQGT*AARHLA
Trigger: TGCCAAGTGACGGGCAGCTCAGGTACCCTGGAGGCT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAACACAGCCATGGAAGTaGGCACTCATATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLTQPWK*ALILVA
Trigger: AGCCACCAATATGAGTGCTCACTTCCATGGCTGTGT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCACAAAGGTCTCCTTTaGAGCCATCTTGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRHKGLL*SHLDRG
Trigger: GCCTCTGTCAAGATGGCTTCAAAGGAGACCTTTGTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCATCAGACATGTCCCTaGAGTCAGGCCTCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKHQTCP*SQASGH
Trigger: GTGACCGGAGGCCTGACTGCAGGGACATGTCTGATG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCTCCAGCATGCCTCGTaGCAGTTCATAGCGCACCTT +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKLQHAS*QFIAHL
Trigger: AAGGTGCGCTATGAACTGGCACGAGGCATGCTGGAG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGAGCTGGCATGGCCATTaGAATTACAGCCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRSWHGH*NYSQSK
Trigger: CTTGCTCTGGCTGTAATTGCAATGGCCATGCCAGCT...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCTCCATAGTAACCAGTTaGACACAGCTCACAGAACTC +
Preference number: 4 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLSIVTS*TQLTEL
Trigger: GAGTTCTGTGAGCTGTGTGCAACTGGTTACTATGGA...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCTTGCATCCTCCAGCTaGGGGCTGTACTCAATGGAC +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKLASSS*GLYSMD
Trigger: GTCCATTGAGTACAGCCCCCAGCTGGAGGATGCAAG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCTTGCATCCTCCAGCTaGGGGCTGTACTCAATGGAC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSLASSS*GLYSMD
Trigger: GTCCATTGAGTACAGCCCCCAGCTGGAGGATGCAAG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCTCTCGGAACTCCTTaGCACTTGCATCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSPLGTP*HLHPPA
Trigger: AGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCCTGGGATGCAGCGGTTaGTGGAGACACACTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVLGCSG*WRHTGS
Trigger: ACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAG...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCTGGGATGCAGCGGTTaGTGGAGACACACTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSLGCSG*WRHTGS
Trigger: ACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTGCTCTGGCACACGTTaGTCACACCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTCSGTR*SHQSRS
Trigger: GCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACAGGGTCACAGGAGCTaGCATGGCCATTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPQGHRS*HGHCNY
Trigger: GTAATTGCAATGGCCATGCCAGCTCCTGTGACCCTG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTATCAGACAGGAGGTTGTaGAAGGAAGAGAACGACAGC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLSDRRL*KEENDS
Trigger: GCTGTCGTTCTCTTCCTTCCACAACCTCCTGTCTGA...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGACCAGAGCAAAGCCTTaGAAGTCCCCAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRTRAKP*KSPGAK
Trigger: CTTTGCTCCTGGGGACTTCCAAGGCTTTGCTCTGGT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGCCTCCTTGTACATTaGGGTCACCCTCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGLLVH*GHPHSL
Trigger: CAGGCTATGAGGGTGACCCCAATGTACAAGGAGGCC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCAGTAGAAGTAGTGTaGTGGGCTCCCACTGACCTG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSPVEVV*WAPTDL
Trigger: CAGGTCAGTGGGAGCCCACCACACTACTTCTACTGG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTCGGCAGGGGACACCTaGTGTAGTCTCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKSAGDT*CSLSRE
Trigger: TTCCCTGCTGAGACTACACCAGGTGTCCCCTGCCGA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTATCAGTTGGGGTCACCTaGAGAAGTCTCAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLSVGVT*RSLSLE
Trigger: CTCAAGACTGAGACTTCTCCAGGTGACCCCAACTGA...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTGCCCTTCAGTCAAATaGGAGGAGGAGGACTCTATG +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRCPSVK*EEEDSM
Trigger: CATAGAGTCCTCCTCCTCCCATTTGACTGAAGGGCA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCATACCATAGACATTaGAAGCCACGCAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPPYHRH*KPRSGR
Trigger: CCTACCGCTGCGTGGCTTCCAATGTCTATGGTATGG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCATGCAGGACAACGGTaGCTTCAGTGTGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKHAGQR*LQCAQQ
Trigger: CTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACCTTGCCCTGCCGGTTaGTGGCAGTGCACACGTAGG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGPCPAG*WQCTRR
Trigger: CCTACGTGTGCACTGCCACCAACCGGCAGGGCAAGG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCCCATCCGCAGAGTCTaGCCGGAAGGTGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASPIRRV*PEGDLD
Trigger: ATCAAGATCACCTTCCGGCCAGACTCTGCGGATGGG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGAGCACTCATATTGGTaGCTGGGGACAGCTGTACCG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASEHSYW*LGTAVP
Trigger: CGGTACAGCTGTCCCCAGCCACCAATATGAGTGCTC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGCCATCGGCTGTGCTaGTCCGAACCTCGAATTCAA +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGHRLC*SEPRIQ
Trigger: TTGAATTCGAGGTTCGGACCAGCACAGCCGATGGCC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGATGCCCCTGGTCAGTGTaGCCACATCTGGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGCPWSV*PHLGHH
Trigger: GTGGTGCCCCAGATGTGGCCACACTGACCAGGGGCA...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTCTGAGAGCTGGACCTaGCGCTGGTTCAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKSESWT*RWFRVP
Trigger: TGGAACTCTGAACCAGCGTCAGGTCCAGCTCTCAGA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCAGTTGGCTGTTGCGTTaGGGGTTCACCAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSSWLLR*GFTRAK
Trigger: CTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTATCCTGACTGGCACTaGGAGGACGACCACCTGAAT +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSYPDWH*EDDHLN
Trigger: ATTCAGGTGGTCGTCCTCTCAGTGCCAGTCAGGATA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS-3UTR TCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGTCCTTCGGCCACACGTaGAGAGGAAGACTCTATTCT +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRSFGHT*RGRLYS
Trigger: AGAATAGAGTCTTCCTCTTCACGTGTGGCCGAAGGA...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCCGAGGCCAAAGGAGATaGAATCTGGCTGTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVRGQRR*NLAVCW
Trigger: CCAACAGACAGCCAGATTTCATCTCCTTTGGCCTCG...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCACACAGCCATGGAAGTaGGCACTCATATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTTQPWK*ALILVA
Trigger: AGCCACCAATATGAGTGCTCACTTCCATGGCTGTGT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGCCACTCGCCGTCATTaGTGGGATCTTCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVATRRH*WDLLRQ
Trigger: TTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAAACTTGAGAGCACAGTaGCCATTTTCACAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLNLRAQ*PFSQAN
Trigger: GTTCGCCTGTGAAAATGGGCACTGTGCTCTCAAGTT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGAAGCTGGCTGGGATaGAGCGGTTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGGSWLG*SGWWRH
Trigger: GTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGAATGCCGAACACCATaGCACGCGAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKECRTP*HASSWP
Trigger: AGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCATCACATCTGGTTTCTaGACCGGCTCCAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASITSGF*TGSSMP
Trigger: AGGCATGCTGGAGCCGGTGCAGAAACCAGATGTGAT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAAAGTTCATCCAGATCTaGCAGGGCCATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLKFIQI*QGHEQM
Trigger: CATTTGCTCATGGCCCTGGCAGATCTGGATGAACTT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCCAAGGCTCTCACAGGTaGGGGAGAACATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVQGSHR*GRTCSL
Trigger: CAGAGAACATGTTCTCCCGCACCTGTGAGAGCCTTG...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCAAGGCTCTCACAGGTaGGGGAGAACATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKQGSHR*GRTCSL
Trigger: CAGAGAACATGTTCTCCCGCACCTGTGAGAGCCTTG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGACAGAGGTTTCTGTGTaGTCAGAGCCCAGGACGACA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKTEVSV*SEPRTT
Trigger: TGTCGTCCTGGGCTCTGAGCACACAGAAACCTCTGT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGGCTTCCTGCCCATTaGCTGCCCTGCACACATATT +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASWLPAH*LPCTHI
Trigger: AATATGTGTGCAGGGCAGGCAATGGGCAGGAAGCCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCAGGAAGAGGACTCAATaGGGATGGGTGACGTGCTAC +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVRKRTQ*GWVTCY
Trigger: GTAGCACGTCACCCATCCGCATTGAGTCCTCTTCCT...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTTGAAGGAAGCCTCATaGTCAGGGTGGGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSLKEAS*SGWELP
Trigger: TGGTAGCTCCCACCCTGAGCATGAGGCTTCCTTCAA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACGATCAGCTCCACTTaGTTCTGTGCTGTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASTISST*FCAVPR
Trigger: CCTAGGCACAGCACAGAAGCAAGTGGAGCTGATCGT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCATCCACCCGCAGGCTaGCATCTTTGTTCAGGCGTT +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKHPPAG*HLCSGV
Trigger: AACGCCTGAACAAAGATGGCAGCCTGCGGGTGGATG...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCAGCGCTGTTATCCGATaGCACTCGCCGTCATTGATG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSSAVIR*HSPSLM
Trigger: CATCAATGACGGCGAGTGGCATCGGATAACAGCGCT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACAGACTCTTGGGAACTaGGGCACTGTGCCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGQTLGN*GTVPRR
Trigger: ACGCCTGGGCACAGTGCCCCAGTTCCCAAGAGTCTG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACACGCCCACCCTCGCTaGTCATTGTCACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGHAHPR*SLSPWD
Trigger: ATCCCAGGGTGACAATGACCAGCGAGGGTGGGCGTG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGCCCAGAAACTGCTTaGGTAGGGCCCAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASCPETA*VGPRKH
Trigger: ATGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCATCAGACAGGAGGTTGTaGAAGGAAGAGAACGACAGC +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPSDRRL*KEENDS
Trigger: GCTGTCGTTCTCTTCCTTCCACAACCTCCTGTCTGA...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGGGCTGAGGGTCTGCTaGATGGTGACAAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKGLRVC*MVTRIE
Trigger: TTCTATCCTTGTCACCATCCAGCAGACCCTCAGCCC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGATTGGTGGGGAGACACTaGGCACATGGGATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGLVGRH*AHGMAL
Trigger: GAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAA...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGTTGAAACTGGCATCTTaGCCCTGCTGTACCGTGCTG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKLKLAS*PCCTVL
Trigger: CAGCACGGTACAGCAGGGCCAAGATGCCAGTTTCAA...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTGGATCCTCCTGGGATaGAAGTGTCAGGGAGATTGC +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVWILLG*KCQGDC
Trigger: GCAATCTCCCTGACACTTCCATCCCAGGAGGATCCA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGTCCCTTGGCAGCTCTaGTCTAAGTTCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTVPWQL*SKFWIL
Trigger: CAGAATCCAGAACTTAGACCAGAGCTGCCAAGGGAC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAGTCCCTTGGCAGCTCTaGTCTAAGTTCTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPVPWQL*SKFWIL
Trigger: CAGAATCCAGAACTTAGACCAGAGCTGCCAAGGGAC...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCAGACATATGTCCCTTaGCAGCTCTGGTCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRQTYVP*QLWSKF
Trigger: GAACTTAGACCAGAGCTGCCAAGGGACATATGTCTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTCAAACTCCACAGAGTaGCCGACTACCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSSNSTE*PTTTEC
Trigger: GCACTCTGTGGTAGTCGGCCACTCTGTGGAGTTTGA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCAATCTGGCTGTCTGTTaGCTAGGTTGGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASNLAVC*LGWWDS
Trigger: GGAGTCCCACCAACCTAGCCAACAGACAGCCAGATT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCGTCACTGTGGGAGATaGGGTCTCAATTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKRHCGR*GLNSHW
Trigger: CCAATGAGAATTGAGACCTCATCTCCCACAGTGACG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTCCTTCGGCCACACGTaGAGAGGAAGACTCTATTCT +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVSFGHT*RGRLYS
Trigger: AGAATAGAGTCTTCCTCTTCACGTGTGGCCGAAGGA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGATAGGCAAAGGCTTTaGCCTTGCCCTGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGDRQRL*PCPAGW
Trigger: CCAACCGGCAGGGCAAGGTCAAAGCCTTTGCCTATC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTCAGAGATCCTTGAGTaGGGCTTCGTAACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVSEILE*GFVTGS
Trigger: TGACCCTGTTACGAAGCCTCACTCAAGGATCTCTGA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCACAAAGGTCTCCTTTaGAGCCATCTTGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASHKGLL*SHLDRG
Trigger: GCCTCTGTCAAGATGGCTTCAAAGGAGACCTTTGTG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGACGAGGATTCTATCCTaGCTGGCACTGAGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKTRILS*LALSWH
Trigger: GTGCCAACTCAGTGCCAGTCAGGATAGAATCCTCGT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGATCACATCTGGTTTCTaGACCGGCTCCAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKITSGF*TGSSMP
Trigger: AGGCATGCTGGAGCCGGTGCAGAAACCAGATGTGAT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAAGTTCATCCAGATCTaGCAGGGCCATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTKFIQI*QGHEQM
Trigger: CATTTGCTCATGGCCCTGGCAGATCTGGATGAACTT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAACACTCTGGCTCCGCTaGTCCTCCACTGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGTLWLR*SSTVTV
Trigger: CACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACCCGCGTCACTTGGCTaGACATTGCGAATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGPASLG*TLRMVR
Trigger: CCTGACCATTCGCAATGTGCAGCCAAGTGACGCGGG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACTGGCAAGCGCAGGATaGCGTTGTGGATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGLASAG*RCGSEP
Trigger: AGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGCATGGGCCTGTCCTTaGACCACACAATTTAGATCC +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASAWACP*TTQFRS
Trigger: GGATCTAAATTGTGTGGTGCAAGGACAGGCCCATGC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAACAGCGGTACTGTCCTaGATCAGCCAGCTCCACGTG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGTAVLS*ISQLHV
Trigger: CACGTGGAGCTGGCTGATGCAGGACAGTACCGCTGT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGATTCAGAGTTCCAGGATaGGTGGGGGTGTGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGFRVPG*VGVWPR
Trigger: TCGAGGCCACACCCCCACCCATCCTGGAACTCTGAA...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCACTCAGCCCCACACTaGCCATCTTGGTGTTATACA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKHSAPH*PSWCYT
Trigger: TGTATAACACCAAGATGGCCAGTGTGGGGCTGAGTG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGAACCAGAATAGCCAATaGGGCATCTGCACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRNQNSQ*GICTPL
Trigger: TAGAGGAGTGCAGATGCCCCATTGGCTATTCTGGTT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGACCCTCAGTCACAGTaGAGGATGAGGCCTCAATTC +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKDPQSQ*RMRPQF
Trigger: GAATTGAGGCCTCATCCTCCACTGTGACTGAGGGTC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCTCAGTTGGGGTCACCTaGAGAAGTCTCAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSSVGVT*RSLSLE
Trigger: CTCAAGACTGAGACTTCTCCAGGTGACCCCAACTGA...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGATTGTGCCATGTGACCTaGGCATGGGCTTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGLCHVT*AWACPG
Trigger: ACCAGGGCAAGCCCATGCCCAGGTCACATGGCACAA...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTTGTCCTCCAGCTCTTaGTCCCGAATCTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASLSSSS*SRIFHS
Trigger: TGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGTGCCCAGCAGAGTTaGTGGCGTTACAGATGTACT +
Preference number: 4 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASCAQQS*WRYRCT
Trigger: AGTACATCTGTAACGCCACCAACTCTGCTGGGCACA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTGGCAAGTAGGGCAGTaGGAGATGCCATGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKWQVGQ*EMPCVV
Trigger: CACAACACATGGCATCTCCCACTGCCCTACTTGCCA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCAGTGAGCACTCATATTaGTGGCTGGGGACAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSSEHSY*WLGTAV
Trigger: TACAGCTGTCCCCAGCCACCAATATGAGTGCTCACT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACGTCACTGCCATCCCTaGAGTCTTCCTGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGRHCHP*SLPVHH
Trigger: GTGATGGACAGGAAGACTGCAGGGATGGCAGTGACG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGAGGAGTCCACCTTGTTaGCCAGAAACTGCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKRSPPC*PETAWV
Trigger: TACCCAAGCAGTTTCTGGGCAACAAGGTGGACTCCT...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGATTCCTCGTCACAGTaGAAGCTGGCTGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGDSSSQ*KLAGMQ
Trigger: CTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCAACCAGAATAGCCAATaGGGCATCTGCACTCCTCTA +
Preference number: 4 (lower is better)
Translates to: VVGPHCWALPSDSGKELVNQNSQ*GICTPL
Trigger: TAGAGGAGTGCAGATGCCCCATTGGCTATTCTGGTT...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACCTTCTGTGTTGTGCTaGCAATTCAGGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGPSVLC*QFRQWP
Trigger: CGGCCACTGCCTGAATTGCCAGCACAACACAGAAGG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTCCTTGGTATATTTCTaGCAGCTGCCAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTSLVYF*QLPVEG
Trigger: TCCTTCTACTGGCAGCTGCCAGAAATATACCAAGGA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAAGGATAGAAGCTTCTTaGGTGCCCGAGCCACTGACG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGRIEAS*VPEPLT
Trigger: CGTCAGTGGCTCGGGCACCCAAGAAGCTTCTATCCT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCATGATGGAGGTCTCCTaGGCATCAATGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KFREPSEETSSSPLVLPTMMEVS*ASMLLL
Trigger: CAACAACAACATTGATGCCCAGGAGACCTCCATCAT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGAGAAGTCTCAGTCTTaGGCCATGTACCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGEKSQS*AMYLMP
Trigger: CGGCATCAGGTACATGGCTCAAGACTGAGACTTCTC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGCACCCTCCGTGTGGTaGTGGCAGCTCTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSAPSVW*WQLWHA
Trigger: GGCGTGCCAGAGCTGCCAGCACCACACGGAGGGTGC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCCACACTGGCCATCTTaGTGTTATACACTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKPHWPS*CYTLSV
Trigger: TACAGACAGTGTATAACACCAAGATGGCCAGTGTGG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAAGCATGAGTCACAAGTaGGGTGGCCATCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGSMSHK*GGHLCP
Trigger: TGGACACAGATGGCCACCCCACTTGTGACTCATGCT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGTCCTTGGTATATTTCTaGCAGCTGCCAGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKSLVYF*QLPVEG
Trigger: TCCTTCTACTGGCAGCTGCCAGAAATATACCAAGGA...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCATGATGGAGGTCTCCTaGGCATCAATGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSMMEVS*ASMLLL
Trigger: CAACAACAACATTGATGCCCAGGAGACCTCCATCAT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTAGCATCTCAGCCCGCTaGACAGGCCGGCCAGACTCG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSSISAR*TGRPDS
Trigger: CGAGTCTGGCCGGCCTGTCCAGCGGGCTGAGATGCT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGGCCCCATCGTGCACTaGTTCCACGGTGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSGPIVH*FHGEAP
Trigger: GGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCGCAGGCTGTCCATCTaGCCGCCGCCAGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSRRLSI*PPPELL
Trigger: GAGGAGTTCTGGCGGCGGCCAGATGGACAGCCTGCG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTAGCACCTCTGGCACCTaGCCATCTCTGTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSSTSGT*PSLWQG
Trigger: GCCCTGCCACAGAGATGGTCAGGTGCCAGAGGTGCT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTGGCTGGGGTGTAGCTaGGGCCTGAATGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSWLGCS*GLNGGC
Trigger: ACAGCCCCCATTCAGGCCCCAGCTACACCCCAGCCA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTGGACCAGTGGATGGTaGGTGGAGGGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSWTSGW*VEGCPW
Trigger: CCACGGGCAACCCTCCACCCACCATCCACTGGTCCA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGCTTGGACCAGTGGATaGTGGGTGGAGGGTTGCCCG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSAWTSG*WVEGCP
Trigger: CGGGCAACCCTCCACCCACCATCCACTGGTCCAAGC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGCACCGGCTCCAGCATaGCTCGTGCCAGTTCATAGC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSAPAPA*LVPVHS
Trigger: GCTATGAACTGGCACGAGGCATGCTGGAGCCGGTGC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGATCCATAGTAACCAGTTaGACACAGCTCACAGAACTC +
Preference number: 4 (lower is better)
Translates to: NNNILDTVRLGAAQESVGSIVTS*TQLTEL
Trigger: GAGTTCTGTGAGCTGTGTGCAACTGGTTACTATGGA...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGCTTTGACCTTGCCCTaGCGGTTGGTGGCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSALTLP*RLVAVH
Trigger: GTGCACTGCCACCAACCGGCAGGGCAAGGTCAAAGC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGCGGCCTGTGTAACCTaGGGCACAAGCGTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSAACVT*GTSVAS
Trigger: ACTTGCGACGCTTGTGCCCCAGGTTACACAGGCCGC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCTTGGAACTTGCCCTaGGAGGTCCCGTTGACAGGG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSPWNLP*EVPLTG
Trigger: CCCTGTCAACGGGACCTCCCAGGGCAAGTTCCAAGG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGAAGCCTGGATGGACTaGTGTGGAGGCGTCACTACC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSEAWMD*CGGVTT
Trigger: GGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCCGCGTCACTTGGCTaGACATTGCGAATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSPASLG*TLRMVR
Trigger: CCTGACCATTCGCAATGTGCAGCCAAGTGACGCGGG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTGCCACGCGAGTTCATaGCCTCACAGGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSCHASS*PHRCMR
Trigger: GCGCATACACCTGTGAGGCCATGAACTCGCGTGGCA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGATCCGAGGGTTCAATaGCTGGCAAGCGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSDPRVQ*LASAGC
Trigger: GCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGTGGAGGGTTGCCCGTaGCTGAGCAGTGTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSVEGCP*LSSVKW
Trigger: CCACTTTACACTGCTCAGCCACGGGCAACCCTCCAC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGGGTGTGGATCCTCCTaGGATGGAAGTGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSGCGSS*DGSVRE
Trigger: CTCCCTGACACTTCCATCCCAGGAGGATCCACACCC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTAACAGGGTCACGGTGTaGAACTGGCCTAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSNRVTV*NWPRAR
Trigger: TCTGGCCCTAGGCCAGTTCCACACCGTGACCCTGTT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTAAGGTCAGTGGCTCGTaGCTCCGCAGAACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSKVSGS*LRRTAR
Trigger: TCTGGCTGTTCTGCGGAGCCACGAGCCACTGACCTT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR TCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCAGGAAGCAAGTGTCTaGGAACCTTCGGGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSQEASV*EPSGSV
Trigger: GACGCTTCCCGAAGGTTCTCAGACACTTGCTTCCTG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTGATTCCTCGTCACAGTaGAAGCTGGCTGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSDSSSQ*KLAGMQ
Trigger: CTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATC...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTCCAGGAAACAAGTGTaGGCAGCTTGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSSRKQV*AAWPAA
Trigger: TGCTGCTGGCCAAGCTGCCCACACTTGTTTCCTGGA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTGTCCTTCGGCCACGTaGGAGGACGAGGATTCAATG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSCPSAT*EDEDSM
Trigger: CATTGAATCCTCGTCCTCCCACGTGGCCGAAGGACA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCACTTGGCTGCACATTaGGAATGGTCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSHLAAH*EWSGCR
Trigger: ACGGCATCCTGACCATTCGCAATGTGCAGCCAAGTG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTACCACACTGACAATCTaGTCTCCGGGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSTTLTI*SPGIFL
Trigger: CAGGAAGATCCCCGGAGACCAGATTGTCAGTGTGGT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCTCAATTCTCATTGGTaGGGAGACACTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSLNSHW*GDTGHM
Trigger: CATGTGCCCAGTGTCTCCCCACCAATGAGAATTGAG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTGCCCTTCAGTCAAATaGGAGGAGGAGGACTCTATG +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSCPSVK*EEEDSM
Trigger: CATAGAGTCCTCCTCCTCCCATTTGACTGAAGGGCA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR GCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTAACTTGAGAGCACAGTaGCCATTTTCACAGGCGAAC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSNLRAQ*PFSQAN
Trigger: GTTCGCCTGTGAAAATGGGCACTGTGCTCTCAAGTT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CCA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCATCAATGTTGTTGTTaGCTCGGCACACATACTCGC +
Preference number: 4 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSHQCCC*LGTHTR
Trigger: GCGAGTATGTGTGCCGAGCCAACAACAACATTGATG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CCCTCGCTGGTGGTGTGGGTGCCGGCGGCGTTGCTCAGGCTGAACTaGGAGGGCTGTTCCGAGGCCCCGAGCACCTGGGCGCGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSLVVWVPAALLRLN*EGCSEAPSTWARLQ
Trigger: CTGGAGCCGCGCCCAGGTGCTCGGGGCCTCGGAACAGCCCTCTCAGTTCAGCCTGAGCAACGCCGCCGGCACCCACACCACCAGCGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp AGACCCCCTCGCTGGTGGTGTGGGTGCCGGCGGCGTTGCTCAGGCTaGACTGAGAGGGCTGTTCCGAGGCCCCGAGCACCTGGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: RPPRWWCGCRRRCSG*TERAVPRPRAPGRG
Trigger: GCCGCGCCCAGGTGCTCGGGGCCTCGGAACAGCCCTCTCAGTTCAGCCTGAGCAACGCCGCCGGCACCCACACCACCAGCGAGGGGGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCCGGAGCGGCCCAGGTGGCAGCGACAGGTGTAGCCTCGACCGTCTaGCCGGTTCACACAAGTGGCGTCCGGCCCACAGGCCTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: PGAAQVAATGVASTV*PVHTSGVRPTGLGV
Trigger: CACCCCGAGGCCTGTGGGCCGGACGCCACTTGTGTGAACCGGCCAGACGGTCGAGGCTACACCTGTCGCTGCCACCTGGGCCGCTCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGGGCAGGGCCGTGTGTaGGCCCCTGCCTGGGCGCGA +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAGQGRV*APAWAR
Trigger: TCGCGCCCAGGCAGGGGCCAACACACGGCCCTGCCC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CCGCCTTCTCGGGGAGGACGCCGCCCACAAGGCTCCACTGGTAGGTaGGCGGGGGCGTGCCGTGAGCCAGGCACTGCAGCTGAACCAGGT +
Preference number: 5 (lower is better)
Translates to: PPSRGGRRPQGSTGR*AGACREPGTAAEPG
Trigger: ACCTGGTTCAGCTGCAGTGCCTGGCTCACGGCACGCCCCCGCTCACCTACCAGTGGAGCCTTGTGGGCGGCGTCCTCCCCGAGAAGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGCAGCGACAGGTGTAGCCTCGACCGTCTGGCCGGTTCACACAAGTaGCGTCCGGCCCACAGGCCTCGGGGTGGCAGTGCAGGGCTTGCG +
Preference number: 5 (lower is better)
Translates to: GSDRCSLDRLAGSHK*RPAHRPRGGSAGLA
Trigger: CGCAAGCCCTGCACTGCCACCCCGAGGCCTGTGGGCCGGACGCCACTTGTGTGAACCGGCCAGACGGTCGAGGCTACACCTGTCGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGCAGTGGCCTGGGCTaGTCCCCAAGGCCCATGGGC +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGSGLG*SPRPMG
Trigger: GCCCATGGGCCTTGGGGACAAGCCCAGGCCACTGCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CGACCAGCTGGAACTCCTGCAGGGCGGGGTCGATCTGCAGCTGGGTaGAGGAGAGGGGTGGCACGCCGGGCTGGGAGGGCATCGTCACAT +
Preference number: 5 (lower is better)
Translates to: RPAGTPAGRGRSAAG*RRGVARRAGRASSH
Trigger: ATGTGACGATGCCCTCCCAGCCCGGCGTGCCACCCCTCTCCTCCACCCAGCTGCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCACAAGTGTGGGCAGCTaGGCCAGCAGCAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCTSVGS*ASSRGS
Trigger: GGAGCCCCTGCTGCTGGCCAAGCTGCCCACACTTGT...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CTCTCGGGGCTAACCTGGACCCTGGGTCCACTGCCCCCGTGCACCTaGAGCATAGCCCTGGCCACATGCTGCCCAGCGCTGCTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LSGLTWTLGPLPPCT*SIALATCCPALLRA
Trigger: TGCCCTCAGCAGCGCTGGGCAGCATGTGGCCAGGGCTATGCTTCAGGTGCACGGGGGCAGTGGACCCAGGGTCCAGGTTAGCCCCGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CACTCTTCCACCTCGAGGGCTCGGGGTCCACTGGAGGGCCCTGGCTaGGCCACTTCTAGGCTCACGGCACTGATACTGGCTGCCCGTGGC +
Preference number: 5 (lower is better)
Translates to: HSSTSRARGPLEGPG*ATSRLTALILAARG
Trigger: GCCACGGGCAGCCAGTATCAGTGCCGTGAGCCTAGAAGTGGCCCAGCCAGGGCCCTCCAGTGGACCCCGAGCCCTCGAGGTGGAAGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGCCCCTGCCTGGGCGCGATGCTGCAGGTCCAGGGGCTGTGGAGGTaGGGCTCCAGGCCGGGCCGTGTGCAACACCAGATTCTTGATACA +
Preference number: 5 (lower is better)
Translates to: GPCLGAMLQVQGLWR*GSRPGRVQHQILDT
Trigger: TGTATCAAGAATCTGGTGTTGCACACGGCCCGGCCTGGAGCCCCACCTCCACAGCCCCTGGACCTGCAGCATCGCGCCCAGGCAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGAGTGGGGCGCGCAGCTaGGACCAGTGGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVSGARS*DQWMVG
Trigger: ACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGCCTTGGACCAGGACTaGAGCAAAGGCCTCCGCGGA +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWALDQD*SKGLRG
Trigger: TCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGGC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCCCTGGGAGGTCCCGTaGACAGGGGCCAAATTGCCC +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPPWEVP*TGAKLP
Trigger: GGGCAATTTGGCCCCTGTCAACGGGACCTCCCAGGG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CTCCGGGCCGCACACTCTGGCTCCGCTGCTCCTCCACTGTCACTGTaGTGGGCTTGCTGGGAGCCTCAGCGACCAGTAGCTCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LRAAHSGSAAPPLSL*WACWEPQRPVAQPC
Trigger: GCAGGGCTGAGCTACTGGTCGCTGAGGCTCCCAGCAAGCCCATCACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CTCCTGCAGGGCGGGGTCGATCTGCAGCTGGGTGGAGGAGAGGGGTaGCACGCCGGGCTGGGAGGGCATCGTCACATTCACACCCTTGAA +
Preference number: 5 (lower is better)
Translates to: LLQGGVDLQLGGGEG*HAGLGGHRHIHTLE
Trigger: TTCAAGGGTGTGAATGTGACGATGCCCTCCCAGCCCGGCGTGCCACCCCTCTCCTCCACCCAGCTGCAGATCGACCCCGCCCTGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGCGTCGCAAGTGGCTaGGCCGTCCGTGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWSVASG*AVRVQE
Trigger: TTCCTGGACACGGACGGCCAAGCCACTTGCGACGCT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCACAAGTGTGGGCAGCTaGGCCAGCAGCAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPATSVGS*ASSRGS
Trigger: GGAGCCCCTGCTGCTGGCCAAGCTGCCCACACTTGT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGGAGCTACCAGCCACTaGGCACACGTACTCGCCGGA +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWGATSH*AHVLAG
Trigger: TCCGGCGAGTACGTGTGCCAAGTGGCTGGTAGCTCC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGCCTTGGACCAGGACTaGAGCAAAGGCCTCCGCGGA +
Preference number: 5 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVALDQD*SKGLRG
Trigger: TCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGGC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCGCAGGCTGCCATCTTaGTTCAGGCGTTCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWRRLPS*FRRSAD
Trigger: GTCTGCGGAACGCCTGAACAAAGATGGCAGCCTGCG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCCAGGGGCATCATaGCCTCCACTGCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPCPGAS*PPLPSG
Trigger: CCCTGAAGGCAGTGGAGGCAATGATGCCCCTGGGCA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GTCCACTGGAGGGCCCTGGCTGGGCCACTTCTAGGCTCACGGCACTaGTACTGGCTGCCCGTGGCACAGAGGAGAATGTGGCCCGCACCA +
Preference number: 5 (lower is better)
Translates to: VHWRALAGPLLGSRH*YWLPVAQRRMWPAP
Trigger: TGGTGCGGGCCACATTCTCCTCTGTGCCACGGGCAGCCAGTATCAGTGCCGTGAGCCTAGAAGTGGCCCAGCCAGGGCCCTCCAGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CCGTGGCGCTACAGCGGAACTCAGCCTGTTGTCCCGGCTGCACGGTaGGCTGTGGAGGGTGTATGGAGGCCACAGGGGCAGTGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: PWRYSGTQPVVPAAR*AVEGVWRPQGQWRY
Trigger: GTACCTCCACTGCCCCTGTGGCCTCCATACACCCTCCACAGCTCACCGTGCAGCCGGGACAACAGGCTGAGTTCCGCTGTAGCGCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CCAGGCGACTGTCGGGTGGCAGGTCACCGTCCACCTTACTCCAGGTaGTGGCAGGCGTCGGGTAGCCTGAGGCCATGCACGGGAAGACAG +
Preference number: 5 (lower is better)
Translates to: PGDCRVAGHRPPYSR*WQASGSLRPCTGRQ
Trigger: CTGTCTTCCCGTGCATGGCCTCAGGCTACCCGACGCCTGCCATCACCTGGAGTAAGGTGGACGGTGACCTGCCACCCGACAGTCGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CTGACTGGCACTGAGTTGGCACCCGAAGCTGAGAGGACGACCACCTaGATGCGTGCCTGGGCGGTGCCTGTGGGGCTGGTGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: LTGTELAPEAERTTT*MRAWAVPVGLVATQ
Trigger: CTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGCTTCGGGTGCCAACTCAGTGCCAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS GCA 90 bp TGGGCCACCCGGGGAATGACCAGTGTGTTGCCTTCTATCCGGTGCTaGCAGGGCAGTGGGGCGCGCAGCTTGGACCAGTGGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: WATRGMTSVLPSIRC*QGSGARSLDQWMVG
Trigger: ACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGCTGGGCCACCCGGGGAATGACCAGTGTGTTGCCTTCTATCCGGTaGTGCCAGGGCAGTGGGGCGCGCAGCTTGGACCAGTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: CWATRGMTSVLPSIR*CQGSGARSLDQWMV
Trigger: CACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CACCCGAAGCTGAGAGGACGACCACCTGAATGCGTGCCTGGGCGGTaGCTGTGGGGCTGGTGGCCACACAGAGGTAGAAGCCAGCGTCAG +
Preference number: 5 (lower is better)
Translates to: HPKLRGRPPECVPGR*LWGWWPHRGRSQRQ
Trigger: CTGACGCTGGCTTCTACCTCTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGCTTCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS CCA 90 bp GTCAGGGCAGGGCCCTCGCTGCGGGACAAGCTCCAGCACGCCGTCTaGAATGCCGAACACCATGCCACGCGAGTTCATGGCCTCACAGGT +
Preference number: 5 (lower is better)
Translates to: VRAGPSLRDKLQHAV*NAEHHATRVHGLTG
Trigger: ACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAGCTTGTCCCGCAGCGAGGGCCCTGCCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCACTGAGAGGACGACCACCTGAATGCGTGCCTGGGCGGTGCCTGTaGGGCTGGTGGCCACACAGAGGTAGAAGCCAGCGTCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ALRGRPPECVPGRCL*GWWPHRGRSQRQQL
Trigger: CAGCTGCTGACGCTGGCTTCTACCTCTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS CCA 90 bp TGTTGCCTTCTATCCGGTGCTGCCAGGGCAGTGGGGCGCGCAGCTTaGACCAGTGGATGGTGGGTGGAGGGTTGCCCGTGGCTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: CCLLSGAARAVGRAA*TSGWWVEGCPWLSS
Trigger: ACTGCTCAGCCACGGGCAACCCTCCACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCCAGGCTGGATGGGGTaGCCTTCATATCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPPGWMG*PSYPGA
Trigger: TGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCTCCAGGGACTCTTTaGTCAGTGGCTGGCACCGGC +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPPGTL*SVAGTG
Trigger: GCCGGTGCCAGCCACTGACAAAAGAGTCCCTGGAGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGAGGTTGGCCCCATGGTaGCGTGTGACCGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVRLAPW*RVTVTV
Trigger: CACAGTCACGGTCACACGCAACCATGGGGCCAACCT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTAAGCTGCCTCCGCGCTaGTACCAGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPKLPPR*YQVMVW
Trigger: CCACACCATCACCTGGTACAAGCGCGGAGGCAGCTT...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGGGCTGATGTGGACGTaGTCCTCCAGCTCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPGLMWT*SSSSWS
Trigger: GGACCAAGAGCTGGAGGACAACGTCCACATCAGCCC...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGATCCCAGAAGAGAACTaGCCCCTGGTCAGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWIPEEN*PLVSVA
Trigger: GGCCACACTGACCAGGGGCAAGTTCTCTTCTGGGAT...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCGGGCAGGGCCGTGTGTaGGCCCCTGCCTGGGCGCGA +
Preference number: 5 (lower is better)
Translates to: VVGPHCWALPSDSGKELVGQGRV*APAWAR
Trigger: TCGCGCCCAGGCAGGGGCCAACACACGGCCCTGCCC...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp ACATGCTGCCCAGCGCTGCTGAGGGCACGGCACAGGTACTGGCCCTaGTCCGAGGGTTCAATGGCTGGCAAGCGCAGGATGCCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TCCPALLRARHRYWP*SEGSMAGKRRMPLW
Trigger: CCACAACGGCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATCAGGGCCAGTACCTGTGCCGTGCCCTCAGCAGCGCTGGGCAGCATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GGCGACGAGGATTCTATCCTGACTGGCACTGAGAGGACGACCACCTaGATGCGTGCCTGGGCGGTGCCTGTGGGGCTGGTGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: GDEDSILTGTERTTT*MRAWAVPVGLVATQ
Trigger: CTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGTGCCAGTCAGGATAGAATCCTCGTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS GCA 90 bp CATCCCTGCAGTCTTCCTGTCCATCACAGAGGTAGTCTCGGGGGATaGAGTGTCCGCTGTGGCACGAGGCCTCCTGGGGCCCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: HPCSLPVHHRGSLGG*SVRCGTRPPGAHRL
Trigger: CAGCCTGTGGGCCCCAGGAGGCCTCGTGCCACAGCGGACACTGCATCCCCCGAGACTACCTCTGTGATGGACAGGAAGACTGCAGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GGCAGGGCCCTCGCTGCGGGACAAGCTCCAGCACGCCGTCTGGAATaGCGAACACCATGCCACGCGAGTTCATGGCCTCACAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: GRALAAGQAPARRLE*RTPCHASSWPHRCM
Trigger: CATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAGCTTGTCCCGCAGCGAGGGCCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TTATACACTGTCTGTAGCAGGACAGCCTCCAGGCTCGCCAGGGCCTaGAGCATCTCAGCCCGCTGGACAGGCCGGCCAGACTCGTGGACC +
Preference number: 5 (lower is better)
Translates to: LYTVCSRTASRLARA*SISARWTGRPDSWT
Trigger: GGTCCACGAGTCTGGCCGGCCTGTCCAGCGGGCTGAGATGCTGCAGGCCCTGGCGAGCCTGGAGGCTGTCCTGCTACAGACAGTGTATAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TTTCCTGGGTGGTGGGCCTGCACTTCCCGCCAGGCTGGATGGGGTTaGCTTCATATCCAGGGGCACAGCTCTCACAGCGGCGGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: FPGWWACTSRQAGWG*LHIQGHSSHSGGLC
Trigger: ACACAGGCCGCCGCTGTGAGAGCTGTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCACCCAGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCACAATTTCCTGGGTGGTGGGCCTGCACTTCCCGCCAGGCTGGATaGGGTTGCCTTCATATCCAGGGGCACAGCTCTCACAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AQFPGWWACTSRQAG*GCLHIQGHSSHSGG
Trigger: GCCGCCGCTGTGAGAGCTGTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCACCCAGGAAATTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGGAATGACCAGTGTGTTGCCTTCTATCCGGTGCTGCCAGGGCAGTaGGGCGCGCAGCTTGGACCAGTGGATGGTGGGTGGAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: GNDQCVAFYPVLPGQ*GAQLGPVDGGWRVA
Trigger: GGCAACCCTCCACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AAGCTGAGAGGACGACCACCTGAATGCGTGCCTGGGCGGTGCCTGTaGGGCTGGTGGCCACACAGAGGTAGAAGCCAGCGTCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KLRGRPPECVPGRCL*GWWPHRGRSQRQQL
Trigger: CAGCTGCTGACGCTGGCTTCTACCTCTGTGTGGCCACCAGCCCCACAGGCACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCACCCTCGCTGGTCATaGTCACCCTGGGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAHPRWS*SPWDEQ
Trigger: CTGCTCATCCCAGGGTGACAATGACCAGCGAGGGTG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCTTGCCCAGAAACTGCTaGGGTAGGGCCCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCLPRNC*GRAQKA
Trigger: TGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCAA...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTGCTCTCAGCCGGTaGCTGCGTGTAAGATGCTTG +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWPALSR*LRVRCL
Trigger: CAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGATGGTCAGGATGCCGTaGAAGTCCATAGCACGGGAC +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWMVRMP*KSIARD
Trigger: GTCCCGTGCTATGGACTTCAACGGCATCCTGACCAT...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGGTAATGATGGAGCCGTaGGGGCTGATGTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWVMMEP*GLMWTL
Trigger: CAACGTCCACATCAGCCCCAACGGCTCCATCATTAC...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGCCATGCACGCTGAGATaGACGACACTCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWPCTLR*TTLWAI
Trigger: TATGGCCCAGAGTGTCGTCAATCTCAGCGTGCATGG...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCTGGGTGCCACGCTCATaGGGCACAGCACAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAWVPRS*GTAQWN
Trigger: GTTCCACTGTGCTGTGCCCAATGAGCGTGGCACCCA...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGCAAAGGCTTTGACCTaGCCCTGCCGGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAAKALT*PCRLVA
Trigger: TGCCACCAACCGGCAGGGCAAGGTCAAAGCCTTTGC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCTCCGCTTCTGCCCATaGTACAGCAGCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWLRFCP*YSSIPS
Trigger: GGATGGGATGCTGCTGTACAATGGGCAGAAGCGGAG...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CCTCACAGGTGTATGCGCCCTGGTCTGCCTCCTTCACGTCACGGATaGTCAGCGTGCCACGCCCACCCTCGCTGGTCATTGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: PHRCMRPGLPPSRHG*SACHAHPRWSLSPW
Trigger: CCAGGGTGACAATGACCAGCGAGGGTGGGCGTGGCACGCTGATCATCCGTGACGTGAAGGAGGCAGACCAGGGCGCATACACCTGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GAGTGCACGGAGGTTCGGACGTTGATGAGCACGGAGGGCAAGGCTTaGACGATCAGCTGGGCAGTGGCCTGGGCTTGTCCCCAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: ECTEVRTLMSTEGKA*TISWAVAWACPQGP
Trigger: TGGGCCTTGGGGACAAGCCCAGGCCACTGCCCAGCTGATCGTTCAAGCCTTGCCCTCCGTGCTCATCAACGTCCGAACCTCCGTGCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CATGCCACGCGAGTTCATGGCCTCACAGGTGTATGCGCCCTGGTCTaGCTCCTTCACGTCACGGATGATCAGCGTGCCACGCCCACCCTC +
Preference number: 5 (lower is better)
Translates to: HATRVHGLTGVCALV*LLHVTDDQRATPTL
Trigger: GAGGGTGGGCGTGGCACGCTGATCATCCGTGACGTGAAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCTGCGGGACAAGCTCCAGCACGCCGTCTGGAATGCCGAACACCATaGCACGCGAGTTCATGGCCTCACAGGTGTATGCGCCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: AAGQAPARRLECRTP*HASSWPHRCMRPGL
Trigger: CAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAGCTTGTCCCGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCCCGCACCAGAAGTTCATCCAGATCTGCCAGGGCCATGAGCAAATaGTCTCGGGTCGCAGGCTGTCCATCTGGCCGCCGCCAGAACTCC +
Preference number: 5 (lower is better)
Translates to: ARTRSSSRSARAMSK*SRVAGCPSGRRQNS
Trigger: GGAGTTCTGGCGGCGGCCAGATGGACAGCCTGCGACCCGAGAGCATTTGCTCATGGCCCTGGCAGATCTGGATGAACTTCTGGTGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CAGATGAAAGTGACGTCAGCTCCGGGCCGCACACTCTGGCTCCGCTaGTCCTCCACTGTCACTGTGATGGGCTTGCTGGGAGCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: QMKVTSAPGRTLWLR*SSTVTVMGLLGASA
Trigger: CGCTGAGGCTCCCAGCAAGCCCATCACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGGAGCTGACGTCACTTTCATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp ACCCGCAGGCTGCCATCTTTGTTCAGGCGTTCCGCAGACACTCGGTaGCAGCGTCCTAAGGTCAGTGGCTCGTGGCTCCGCAGAACAGCC +
Preference number: 5 (lower is better)
Translates to: TRRLPSLFRRSADTR*QRPKVSGSWLRRTA
Trigger: GGCTGTTCTGCGGAGCCACGAGCCACTGACCTTAGGACGCTGGCACCGAGTGTCTGCGGAACGCCTGAACAAAGATGGCAGCCTGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp AGCCATCTTGACAGAGGCACTGGAACTCATATTCGCCCGCAGGCATaGATGTGGCGCCATTCTGGCAGGGCTGGCGCTCGCACGGGGAGC +
Preference number: 5 (lower is better)
Translates to: SHLDRGTGTHIRPQA*MWRHSGRAGARTGS
Trigger: GCTCCCCGTGCGAGCGCCAGCCCTGCCAGAATGGCGCCACATGCATGCCTGCGGGCGAATATGAGTTCCAGTGCCTCTGTCAAGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCAGTGGCTACGCAGGTGAAAGTCACTGTCTGGCCCCGGGAAGCCTaGATGGACTGCTGTGGAGGCGTCACTACCTGGGGAGGCATGCAG +
Preference number: 5 (lower is better)
Translates to: PVATQVKVTVWPREA*MDCCGGVTTWGGMQ
Trigger: CTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTCCCGGGGCCAGACAGTGACTTTCACCTGCGTAGCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CAGAAAGCATCGTGGACAAGGAAGCGGCGAGACAGGTCGACCAGCTaGAACTCCTGCAGGGCGGGGTCGATCTGCAGCTGGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QKASWTRKRRDRSTS*NSCRAGSICSWVEE
Trigger: CTCCTCCACCCAGCTGCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGTCGACCTGTCTCGCCGCTTCCTTGTCCACGATGCTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TACCCTGGCTGGCACTGTTCACAGCTAGCACCCTCCGTGTGGTGCTaGCAGCTCTGGCACGCCCCTGTCTCAGGCTCACAGGTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: YPGWHCSQLAPSVWC*QLWHAPVSGSQVSE
Trigger: CTCAGAGACCTGTGAGCCTGAGACAGGGGCGTGCCAGAGCTGCCAGCACCACACGGAGGGTGCTAGCTGTGAACAGTGCCAGCCAGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CTGGCAGTCCTGTGGTGTGCCCCGTTGGGCATCCCCATAGTACCCTaGCTGGCACTGTTCACAGCTAGCACCCTCCGTGTGGTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LAVLWCAPLGIPIVP*LALFTASTLRVVLA
Trigger: TGCCAGCACCACACGGAGGGTGCTAGCTGTGAACAGTGCCAGCCAGGGTACTATGGGGATGCCCAACGGGGCACACCACAGGACTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGGGGAGTTGAGATCTGGGGCAAGGCTTGTACTAGCAGCAGCACGTaGGACTGGGTGGTGCCCGCAGCGTTGGTAGCTGCACAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: GGVEIWGKACTSSST*DWVVPAALVAAQRY
Trigger: GTACCGCTGTGCAGCTACCAACGCTGCGGGCACCACCCAGTCCCACGTGCTGCTGCTAGTACAAGCCTTGCCCCAGATCTCAACTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCACCTCTCGGAACTCCTaGGCACTTGCATCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPATSRNS*ALASSS
Trigger: GCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCCCACGAATGCGTGGGAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTCACAGCGCCACAACTaGAGAGCACAGTGCCCATTT +
Preference number: 5 (lower is better)
Translates to: AHECVGVGAPTLQSSPGWSQRHN*RAQCPF
Trigger: AAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTGA...CCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTCCCACGCATTCGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTCTGCTCTGGCACACGTaGGTCACACCAAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPLLWHT*VTPKQK
Trigger: CTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAG...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCCTGCTCTCAGCCGGTaGCTGCGTGTAAGATGCTTG +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAPALSR*LRVRCL
Trigger: CAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCAACATGTTCTCTGGGTaGGTCAGCGGGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPANMFSG*VSGQAQ
Trigger: CTGTGCCTGCCCGCTGACCAACCCAGAGAACATGTT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGATGGTCAGGATGCCGTaGAAGTCCATAGCACGGGAC +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWMVRMP*KSIARD
Trigger: GTCCCGTGCTATGGACTTCAACGGCATCCTGACCAT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGATCTTCCACTCAACCTaGATGGGCGTTGCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWIFHST*MGVAPS
Trigger: CGAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGAT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGTGTGCCCAGCAGAGTaGGTGGCGTTACAGATGTAC +
Preference number: 5 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVVCPAE*VALQMY
Trigger: GTACATCTGTAACGCCACCAACTCTGCTGGGCACAC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGGCAGTGGCCTGGGCTaGTCCCCAAGGCCCATGGGC +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKGSGLG*SPRPMG
Trigger: GCCCATGGGCCTTGGGGACAAGCCCAGGCCACTGCC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGCAAAGGCTTTGACCTaGCCCTGCCGGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLAKALT*PCRLVA
Trigger: TGCCACCAACCGGCAGGGCAAGGTCAAAGCCTTTGC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGTGGCAGTGCAGGGCTaGCGAATGTTCACAGCGGCT +
Preference number: 5 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLVAVQG*RMFTAA
Trigger: AGCCGCTGTGAACATTCGCAAGCCCTGCACTGCCAC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TCGCAGGCTGTCCATCTGGCCGCCGCCAGAACTCCTCTCGGAAGATaGTCTCATAGCTCCTCCTCTCTGGGCCCTGTAGTGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SQAVHLAAARTPLGR*SHSSSSLGPVVLAG
Trigger: CCCAGCCAGCACTACAGGGCCCAGAGAGGAGGAGCTATGAGATCATCTTCCGAGAGGAGTTCTGGCGGCGGCCAGATGGACAGCCTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGGGCTGGTCAAAGCTCAGTCGGATCTGGTCCCGGAAGCGCAGGCTaGTCTGGCACACGTTGGTCACACCAAAGCAGAAGCAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: WAGQSSVGSGPGSAG*SGTRWSHQSRSRAG
Trigger: GCCTGCCCTGCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTTTGACCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGGCCGAGGTGGGCAAAGTTGCTGAAAGAGAGGCGGGCCCCATCGTaGACTGGTTCCACGGTGAAGCCCCCTGTCAGTTGGCTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: WPRWAKLLKERRAPS*TGSTVKPPVSWLLR
Trigger: ACGCAACAGCCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCCCGCCTCTCTTTCAGCAACTTTGCCCACCTCGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS GCA 90 bp GGAGCCAGCGCCGTTACTGACGTGACACACATACTCTCCGGAGTCTaGTGGGGTCACTTGAGGGATCCGGAGGCGGGAGCCCACAATCTG +
Preference number: 5 (lower is better)
Translates to: GASAVTDVTHILSGV*WGHLRDPEAGAHNL
Trigger: CAGATTGTGGGCTCCCGCCTCCGGATCCCTCAAGTGACCCCAGCAGACTCCGGAGAGTATGTGTGTCACGTCAGTAACGGCGCTGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CCACGGTGCCAGTGTCCACGATCAGCTCCACTTGCTTCTGTGCTGTaGCTAGGGCGTTCTGGGCTTGGCACACGTAGGTGCCTGCGTCTG +
Preference number: 5 (lower is better)
Translates to: PRCQCPRSAPLASVL*LGRSGLGTRRCLRL
Trigger: CAGACGCAGGCACCTACGTGTGCCAAGCCCAGAACGCCCTAGGCACAGCACAGAAGCAAGTGGAGCTGATCGTGGACACTGGCACCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CTGGGTGGTGCCCGCAGCGTTGGTAGCTGCACAGCGGTACTGTCCTaGATCAGCCAGCTCCACGTGGGCAATCCTGATGATGCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: LGGARSVGSCTAVLS*ISQLHVGNPDDASA
Trigger: AGCGGAAGCATCATCAGGATTGCCCACGTGGAGCTGGCTGATGCAGGACAGTACCGCTGTGCAGCTACCAACGCTGCGGGCACCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CTGGTGAAGAGCGTAACACAGGACGCCCTCCATCCACCCGCAGGCTaGCATCTTTGTTCAGGCGTTCCGCAGACACTCGGTGCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: LVKSVTQDALHPPAG*HLCSGVPQTLGASV
Trigger: GACGCTGGCACCGAGTGTCTGCGGAACGCCTGAACAAAGATGGCAGCCTGCGGGTGGATGGAGGGCGTCCTGTGTTACGCTCTTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GACCAGAGAAGCCAGGCAGACAGAGGCATCGGGCACCCCGGCAGGTaGCACCATTCAGACATGGTTCATGCAGCTGGCACGGGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: DQRSQADRGIGHPGR*HHSDMVHAAGTGSP
Trigger: AGGAGAACCCGTGCCAGCTGCATGAACCATGTCTGAATGGTGGCACCTGCCGGGGTGCCCGATGCCTCTGTCTGCCTGGCTTCTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCAGCACGCCGTCTGGAATGCCGAACACCATGCCACGCGAGTTCATaGCCTCACAGGTGTATGCGCCCTGGTCTGCCTCCTTCACGTCAC +
Preference number: 5 (lower is better)
Translates to: PARRLECRTPCHASS*PHRCMRPGLPPSRH
Trigger: GTGACGTGAAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TTCATATCCAGGGGCACAGCTCTCACAGCGGCGGCCTGTGTAACCTaGGGCACAAGCGTCGCAAGTGGCTTGGCCGTCCGTGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: FISRGTALTAAACVT*GTSVASGLAVRVQE
Trigger: TTCCTGGACACGGACGGCCAAGCCACTTGCGACGCTTGTGCCCCAGGTTACACAGGCCGCCGCTGTGAGAGCTGTGCCCCTGGATATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GAGGGCACGGCACAGGTACTGGCCCTGATCCGAGGGTTCAATGGCTaGCAAGCGCAGGATGCCGTTGTGGATCTGAGCCTTCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: EGTAQVLALIRGFNG*QAQDAVVDLSLRRK
Trigger: CTTCCTGCGAAGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATCAGGGCCAGTACCTGTGCCGTGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp ACTGGGTGCACCACGCTCTGGGAGTGGGAGGGGCTGAGGGTCTGCTaGATGGTGACAAGGATAGAAGCTTCTTGGGTGCCCGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: TGCTTLWEWEGLRVC*MVTRIEASWVPEPL
Trigger: CAGTGGCTCGGGCACCCAAGAAGCTTCTATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCGGATGGGCGGGACTACACCAGGGATGTGGACATTAGCGGCAGCTaGTGTAATCGAGACCAGGACGGAAGCCTCCAGAGGGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: ADGRDYTRDVDISGS*CNRDQDGSLQRARA
Trigger: AGCTCTGGCCCTCTGGAGGCTTCCGTCCTGGTCTCGATTACACCAGCTGCCGCTAATGTCCACATCCCTGGTGTAGTCCCGCCCATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS CCA 90 bp CGGGGGCGTGCCGTGAGCCAGGCACTGCAGCTGAACCAGGTTCCCTaGCTGCGCCGAGGTATGTTCTGGAATTATGGTGGCATATGGAGG +
Preference number: 5 (lower is better)
Translates to: RGRAVSQALQLNQVP*LRRGMFWNYGGIWR
Trigger: CCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGTTCAGCTGCAGTGCCTGGCTCACGGCACGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GAGCCGGTAGTGCCAGGTAGGAACCAGCACCAGACATCGATGGGGTaGTCACCGTTACACCTTCTTCACACCTCACCCCGGAGCGGCCCA +
Preference number: 5 (lower is better)
Translates to: EPVVPGRNQHQTSMG*SPLHLLHTSPRSGP
Trigger: TGGGCCGCTCCGGGGTGAGGTGTGAAGAAGGTGTAACGGTGACCACCCCATCGATGTCTGGTGCTGGTTCCTACCTGGCACTACCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CTTGACAGAGGCACTGGAACTCATATTCGCCCGCAGGCATGCATGTaGCGCCATTCTGGCAGGGCTGGCGCTCGCACGGGGAGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LDRGTGTHIRPQACM*RHSGRAGARTGSCH
Trigger: ATGACAGCTCCCCGTGCGAGCGCCAGCCCTGCCAGAATGGCGCCACATGCATGCCTGCGGGCGAATATGAGTTCCAGTGCCTCTGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TTAGGACCTGGGGACCGGCCGGTGACCAGATCCTCACCGTCTACTTaGATGGAGCCTCTCTGGCCCTCTCGCAGCGCTGTTATCCGATGC +
Preference number: 5 (lower is better)
Translates to: LGPGDRPVTRSSPST*MEPLWPSRSAVIRC
Trigger: GCATCGGATAACAGCGCTGCGAGAGGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCAGGTCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTGGAACTCCTTGGCACTaGCATCCTCCAGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCGTPWH*HPPAGG
Trigger: GCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCC...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCTTGACAGAACAATaGGCCTCATCTGTCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPCLTEQ*ASSVRS
Trigger: GGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGGGATGTGGCCCCAGTaGAGCCTCCAGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLGMWPQ*SLQLMM
Trigger: CATCATCAACTGGAGGCTCAACTGGGGCCACATCCC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTCACCCTCGCTGGTCATaGTCACCCTGGGATGAGCAG +
Preference number: 5 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSHPRWS*SPWDEQ
Trigger: CTGCTCATCCCAGGGTGACAATGACCAGCGAGGGTG...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCCTGCTCTGGCACACGTaGGTCACACCAAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPALLWHT*VTPKQK
Trigger: CTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAG...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGGAGCTGGCATGGCCATaGCAATTACAGCCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWELAWP*QLQPEQ
Trigger: TTGCTCTGGCTGTAATTGCAATGGCCATGCCAGCTC...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTAGCGTCGCAAGTGGCTaGGCCGTCCGTGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSVASG*AVRVQE
Trigger: TTCCTGGACACGGACGGCCAAGCCACTTGCGACGCT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGGGTTCAGACAGGAGGTaGTGGAAGGAAGAGAACGAC +
Preference number: 5 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVGSDRR*WKEEND
Trigger: GTCGTTCTCTTCCTTCCACAACCTCCTGTCTGAACC...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GAGTTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGAGGTCTCAATTCTCATaGGTGGGGAGACACTGGGCA +
Preference number: 5 (lower is better)
Translates to: ELAHPPSSPAQGGSSEAWRSQFS*VGRHWA
Trigger: TGCCCAGTGTCTCCCCACCAATGAGAATTGAGACCT...CCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGCAGGTGGGTGAGGTCTCAATTCTCATaGGTGGGGAGACACTGGGCA +
Preference number: 5 (lower is better)
Translates to: LDTVRLGAAQESVGGRWVRSQFS*VGRHWA
Trigger: TGCCCAGTGTCTCCCCACCAATGAGAATTGAGACCT...CACCCACCTGCCTCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCTGGGCATCAATGTTGTaGTTGGCTCGGCACACATAC +
Preference number: 5 (lower is better)
Translates to: AHPPSSPAQGGSSEAWPCWASML*LARHTY
Trigger: GTATGTGTGCCGAGCCAACAACAACATTGATGCCCA...GCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCGCGGAAGGAAGAGTTTaGGCTGGAGGGTACTGTGAG +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPAAEGRV*AGGYCE
Trigger: CTCACAGTACCCTCCAGCCAAAACTCTTCCTTCCGC...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTCCACAGGCCCGCTCTaGCCCCCACTGAACAGTAAG +
Preference number: 5 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSSTGPL*PPLNSK
Trigger: CTTACTGTTCAGTGGGGGCAAGAGCGGGCCTGTGGA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTATGCCCAGGGGCATCATaGCCTCCACTGCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLCPGAS*PPLPSG
Trigger: CCCTGAAGGCAGTGGAGGCAATGATGCCCCTGGGCA...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TTGGCGCACCCACCCTCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCACTCGCCGTCATaGATGGGATCTTCTGAGACA +
Preference number: 5 (lower is better)
Translates to: LAHPPSSPAQGGSSEAWPCHSPS*MGSSET
Trigger: TGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCA...AGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGAGGGTGGGTGCGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CAGAGACCCTGCTCTCAGCCGGTTGCTGCGTGTAAGATGCTTGGATaGGGAGGGCATCAATGCCTGCCAGGGCCATCAGCAGGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: QRPCSQPVAACKMLG*GGHQCLPGPSAGAP
Trigger: GGGAGCACCTGCTGATGGCCCTGGCAGGCATTGATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGGGTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TCCGAGGGTTCAATGGCTGGCAAGCGCAGGATGCCGTTGTGGATCTaGGCCTTCGCAGGAAGCTGGCCGCTAGGACCCCCTATCCATTCC +
Preference number: 5 (lower is better)
Translates to: SEGSMAGKRRMPLWI*AFAGSWPLGPPIHS
Trigger: GGAATGGATAGGGGGTCCTAGCGGCCAGCTTCCTGCGAAGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAGCCATTGAACCCTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CGTTACAGATGTACTGTCCTGAGTCCTGCTGGGCCACCCGGGGAATaGCCAGTGTGTTGCCTTCTATCCGGTGCTGCCAGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: RYRCTVLSPAGPPGE*PVCCLLSGAARAVG
Trigger: CCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CCCGGAAATAGACCATCTGGAAGTCCCCGCTGCCCACGTCTCCGCTaGCGAGGCCATCTCCTGATGCATCATCTGCCAGCAGGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PGNRPSGSPRCPRLR*RGHLLMHHLPAGPH
Trigger: ATGAGGACCTGCTGGCAGATGATGCATCAGGAGATGGCCTCGGCAGCGGAGACGTGGGCAGCGGGGACTTCCAGATGGTCTATTTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp ACGCAGGTGAAAGTCACTGTCTGGCCCCGGGAAGCCTGGATGGACTaGTGTGGAGGCGTCACTACCTGGGGAGGCATGCAGCCAAACTCA +
Preference number: 5 (lower is better)
Translates to: TQVKVTVWPREAWMD*CGGVTTWGGMQPNS
Trigger: TGAGTTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTCCCGGGGCCAGACAGTGACTTTCACCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CCGCACCCACGAGGATCACATCTGGTTTCTGCACCGGCTCCAGCATaGCTCGTGCCAGTTCATAGCGCACCTTGTAGCGCAGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: PHPRGSHLVSAPAPA*LVPVHSAPCSAGSL
Trigger: GAGGCTTCCTGCGCTACAAGGTGCGCTATGAACTGGCACGAGGCATGCTGGAGCCGGTGCAGAAACCAGATGTGATCCTCGTGGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGCAGGTCCAGGGGCTGTGGAGGTGGGGCTCCAGGCCGGGCCGTGTaGAACACCAGATTCTTGATACAGCCTGTGATCCCAGAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: CRSRGCGGGAPGRAV*NTRFLIQPVIPEEN
Trigger: GTTCTCTTCTGGGATCACAGGCTGTATCAAGAATCTGGTGTTGCACACGGCCCGGCCTGGAGCCCCACCTCCACAGCCCCTGGACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CATCACTGCGGTCGGGACAGTCGGATTCCTCGTCACAGTGGAAGCTaGCTGGGATGCAGCGGTTGGTGGAGACACACTGGAAGTGCGTGG +
Preference number: 5 (lower is better)
Translates to: HHCGRDSRIPRHSGS*LGCSGWWRHTGSAW
Trigger: CCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATCCGACTGTCCCGACCGCAGTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TGGTCAAAGCTCAGTCGGATCTGGTCCCGGAAGCGCAGGCTGCTCTaGCACACGTTGGTCACACCAAAGCAGAAGCAGGGCAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: WSKLSRIWSRKRRLL*HTLVTPKQKQGRQE
Trigger: CTCCTGCCTGCCCTGCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTTTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TCTCACAGCGGCGGCCTGTGTAACCTGGGGCACAAGCGTCGCAAGTaGCTTGGCCGTCCGTGTCCAGGAAGCAAGTGTCTGAGAACCTTC +
Preference number: 5 (lower is better)
Translates to: SHSGGLCNLGHKRRK*LGRPCPGSKCLRTF
Trigger: GAAGGTTCTCAGACACTTGCTTCCTGGACACGGACGGCCAAGCCACTTGCGACGCTTGTGCCCCAGGTTACACAGGCCGCCGCTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GAGGTGGGCAAAGTTGCTGAAAGAGAGGCGGGCCCCATCGTGCACTaGTTCCACGGTGAAGCCCCCTGTCAGTTGGCTGTTGCGTTGAGG +
Preference number: 5 (lower is better)
Translates to: EVGKVAEREAGPIVH*FHGEAPCQLAVALR
Trigger: CCTCAACGCAACAGCCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCCCGCCTCTCTTTCAGCAACTTTGCCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CCA 90 bp GCACCTCAGGGAGTGTGGGCCGCCTTGGGGAACCACGCTCCGAGATaGATGGATCTGAACCTCCAGGGACTCTTTTGTCAGTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: APQGVWAALGNHAPR*MDLNLQGLFCQWLA
Trigger: TGCCAGCCACTGACAAAAGAGTCCCTGGAGGTTCAGATCCATCCATCTCGGAGCGTGGTTCCCCAAGGCGGCCCACACTCCCTGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TTGGCCGTACAGATGAAAGTGACGTCAGCTCCGGGCCGCACACTCTaGCTCCGCTGCTCCTCCACTGTCACTGTGATGGGCTTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LAVQMKVTSAPGRTL*LRCSSTVTVMGLLG
Trigger: TCCCAGCAAGCCCATCACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGGAGCTGACGTCACTTTCATCTGTACGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCACATGCAGGACAACGGTGGCTTCAGTGTGCCCAGCAGAGTTGGTaGCGTTACAGATGTACTGTCCTGAGTCCTGCTGGGCCACCCGGG +
Preference number: 5 (lower is better)
Translates to: PHAGQRWLQCAQQSW*RYRCTVLSPAGPPG
Trigger: CCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TCAGGGTGCCAGTCTGACTCCACTACCCCATATCCAGCGCCTTGTTaGCAGCGTGGACCAGAGAAGCCAGGCAGACAGAGGCATCGGGCA +
Preference number: 5 (lower is better)
Translates to: SGCQSDSTTPYPAPC*QRGPEKPGRQRHRA
Trigger: TGCCCGATGCCTCTGTCTGCCTGGCTTCTCTGGTCCACGCTGCCAACAAGGCGCTGGATATGGGGTAGTGGAGTCAGACTGGCACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGGCGGGAAAGGAACCTCACCAGGGATGTGGACATTAGCGGCAGCTaGTGTAATCGAGACCAGGACGGAAGCCTCCAGAGGGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GRERNLTRDVDISGS*CNRDQDGSLQRARA
Trigger: AGCTCTGGCCCTCTGGAGGCTTCCGTCCTGGTCTCGATTACACCAGCTGCCGCTAATGTCCACATCCCTGGTGAGGTTCCTTTCCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACCAGGCTGGATGGGGTaGCCTTCATATCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLPGWMG*PSYPGA
Trigger: TGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAAAGGGCACTATGAAGTaGCTGGGCTGGCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLKGTMK*LGWPGL
Trigger: CAGCCCTGGCCAGCCCAGCAACTTCATAGTGCCCTT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGCGGAAGGAAGAGTTTaGGCTGGAGGGTACTGTGAG +
Preference number: 5 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLAEGRV*AGGYCE
Trigger: CTCACAGTACCCTCCAGCCAAAACTCTTCCTTCCGC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGAGCTGCCTTCTGCTCCCAGAACAGTGGCTCAGGCCATGGCCACACCCCCTCGTAATGATGGAGCCGTaGGGGCTGATGTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: VSCLLLPEQWLRPWPHPLVMMEP*GLMWTL
Trigger: CAACGTCCACATCAGCCCCAACGGCTCCATCATTAC...GAGGGGGTGTGGCCATGGCCTGAGCCACTGTTCTGGGAGCAGAAGGCAGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGAGTGGGGCGCGCAGCTaGGACCAGTGGATGGTGGGT +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKSGARS*DQWMVG
Trigger: ACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGTCCACAGGCCCGCTCTaGCCCCCACTGAACAGTAAG +
Preference number: 5 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRSTGPL*PPLNSK
Trigger: CTTACTGTTCAGTGGGGGCAAGAGCGGGCCTGTGGA...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TACAGCCAGAGCAAGTACCCAGGTAGGGCCCGCCAGGCACGCGGGTaGAGTGGGCATCGCAGCTCTCGCAAGACAAACCAGAATAGCCAA +
Preference number: 5 (lower is better)
Translates to: YSQSKYPGRARQARG*SGHRSSRKTNQNSQ
Trigger: TTGGCTATTCTGGTTTGTCTTGCGAGAGCTGCGATGCCCACTTCACCCGCGTGCCTGGCGGGCCCTACCTGGGTACTTGCTCTGGCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GGGCTGAGTCCTGGCCGGTGTTCTCTGGCACAGCCACATCCATGCTaGTACCAGAGACCCTGCTCTCAGCCGGTTGCTGCGTGTAAGATG +
Preference number: 5 (lower is better)
Translates to: GLSPGRCSLAQPHPC*YQRPCSQPVAACKM
Trigger: CATCTTACACGCAGCAACCGGCTGAGAGCAGGGTCTCTGGTATCAGCATGGATGTGGCTGTGCCAGAGAACACCGGCCAGGACTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GAGCTGTGGAGGGTGTATGGAGGCCACAGGGGCAGTGGAGGTACCTaGGACCTGAACATGCAGTGTGGCTGTGCCCTGGTCCATAGCGAA +
Preference number: 5 (lower is better)
Translates to: ELWRVYGGHRGSGGT*DLNMQCGCALVHSE
Trigger: TTCGCTATGGACCAGGGCACAGCCACACTGCATGTTCAGGTCTCAGGTACCTCCACTGCCCCTGTGGCCTCCATACACCCTCCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CCTCCGACACGTGGGAGGAAGATGATTCGATTCGGACTGGAGGGATaGCCCCAGGTGCAGTGCCTGCAGGCTCAATGGTCACCAGGACAG +
Preference number: 5 (lower is better)
Translates to: PPTRGRKMIRFGLEG*PQVQCLQAQWSPGQ
Trigger: CTGTCCTGGTGACCATTGAGCCTGCAGGCACTGCACCTGGGGTCATCCCTCCAGTCCGAATCGAATCATCTTCCTCCCACGTGTCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp ATGGAAGTGTCAGGGAGATTGCTAGAGGAGCCTTGGACCAGGACTTaGGCAAAGGCCTCCGCGGAGCCCACCCTGTTGGAGACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MEVSGRLLEEPWTRT*AKASAEPTLLETWQ
Trigger: CTGCCAGGTCTCCAACAGGGTGGGCTCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGGCTCCTCTAGCAATCTCCCTGACACTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp ACGATGCCAGGCCGTAGGTGTCCCCCGACTTTGCTCCATGTCACCTaGGGCTTAGGGTCACCCAGGGCCAAGCACTCAAACTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: TMPGRRCPPTLLHVT*GLGSPRAKHSNSTE
Trigger: CTCTGTGGAGTTTGAGTGCTTGGCCCTGGGTGACCCTAAGCCTCAGGTGACATGGAGCAAAGTCGGGGGACACCTACGGCCTGGCATCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp AGTAGGGTATCACTCGCTCTGGCACCTGCAGATAGGCAAAGGCTTTaGCCTTGCCCTGCCGGTTGGTGGCAGTGCACACGTAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SRVSLALAPADRQRL*PCPAGWWQCTRRCR
Trigger: CCGGCACCTACGTGTGCACTGCCACCAACCGGCAGGGCAAGGTCAAAGCCTTTGCCTATCTGCAGGTGCCAGAGCGAGTGATACCCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TCTGGCCCTCTCGCAGCGCTGTTATCCGATGCCACTCGCCGTCATTaGTGGGATCTTCTGAGACAAGACGGGCCTCCCCACTGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: SGPLAALLSDATRRH*WDLLRQDGPPHCPV
Trigger: AACTGGGCAGTGGGGAGGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTGCGAGAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp AAGCCTGGATGGACTGCTGTGGAGGCGTCACTACCTGGGGAGGCATaGAGCCAAACTCATCACTGCGGTCGGGACAGTCGGATTCCTCGT +
Preference number: 5 (lower is better)
Translates to: KPGWTAVEASLPGEA*SQTHHCGRDSRIPR
Trigger: ACGAGGAATCCGACTGTCCCGACCGCAGTGATGAGTTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp AATGCCGAACACCATGCCACGCGAGTTCATGGCCTCACAGGTGTATaGGCCCTGGTCTGCCTCCTTCACGTCACGGATGATCAGCGTGCC +
Preference number: 5 (lower is better)
Translates to: NAEHHATRVHGLTGV*ALVCLLHVTDDQRA
Trigger: GGCACGCTGATCATCCGTGACGTGAAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp AGCGCCCCACTACATTGTTCTTACAGCGGCAAGTCTCCCCTGAGGTaGCCAGGCTCCCTCGCTCATCACAGCGCACAATTTCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SAPLHCSYSGKSPLR*PGSLAHHSAQFPGW
Trigger: CCACCCAGGAAATTGTGCGCTGTGATGAGCGAGGGAGCCTGGGCACCTCAGGGGAGACTTGCCGCTGTAAGAACAATGTAGTGGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCATCAGCCAGCTCCACGTGGGCAATCCTGATGATGCTTCCGCTTTaGACGATGCCAGGCCGTAGGTGTCCCCCGACTTTGCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: ASASSTWAILMMLPL*TMPGRRCPPTLLHV
Trigger: GACATGGAGCAAAGTCGGGGGACACCTACGGCCTGGCATCGTGCAAAGCGGAAGCATCATCAGGATTGCCCACGTGGAGCTGGCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCTCCGTATTGCCCAGGGGCATCATTGCCTCCACTGCCTTCAGGGTaGCAGTCTGACTCCACTACCCCATATCCAGCGCCTTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: APYCPGASLPPLPSG*QSDSTTPYPAPCWQ
Trigger: CTGCCAACAAGGCGCTGGATATGGGGTAGTGGAGTCAGACTGGCACCCTGAAGGCAGTGGAGGCAATGATGCCCCTGGGCAATACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CGGATTCCTCGTCACAGTGGAAGCTGGCTGGGATGCAGCGGTTGGTaGAGACACACTGGAAGTGCGTGGGCCCACATACTTCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RIPRHSGSWLGCSGW*RHTGSAWAHILLQA
Trigger: AGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGTGAAAGTCACTGTCTGGCCCCGGGAAGCCTGGATGGACTGCTGTaGAGGCGTCACTACCTGGGGAGGCATGCAGCCAAACTCATCACT +
Preference number: 5 (lower is better)
Translates to: GESHCLAPGSLDGLL*RRHYLGRHAAKLIT
Trigger: AGTGATGAGTTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTCCCGGGGCCAGACAGTGACTTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGCTGGGAGGGCATCGTCACATTCACACCCTTGAAGTCATTGGGCTaGTCAAAGCTCAGTCGGATCTGGTCCCGGAAGCGCAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GWEGIVTFTPLKSLG*SKLSRIWSRKRRLL
Trigger: GAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGTGAATGTGACGATGCCCTCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp ATGCAGAAGCACTTGAGGCAGCCGTCCGGGTTTTGCTTGCTCAGGTaGAACGAGCCGTCCGAGCACTCGTTGCACAAGCGCCCCACTACA +
Preference number: 5 (lower is better)
Translates to: MQKHLRQPSGFCLLR*NEPSEHSLHKRPTT
Trigger: TGTAGTGGGGCGCTTGTGCAACGAGTGCTCGGACGGCTCGTTCCACCTGAGCAAGCAAAACCCGGACGGCTGCCTCAAGTGCTTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp ATTGCCCGTAATCTGGATATCAGGGTCCAAGAGTGGGCTGCCCTGTaGCCCGGCTGTGTAGGAGAGGGTGTACCGCAGCTTCCCGCCATA +
Preference number: 5 (lower is better)
Translates to: IARNLDIRVQEWAAL*PGCVGEGVPQLPAI
Trigger: TATGGCGGGAAGCTGCGGTACACCCTCTCCTACACAGCCGGGCCACAGGGCAGCCCACTCTTGGACCCTGATATCCAGATTACGGGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TGCCAGGGCCATGAGCAAATGCTCTCGGGTCGCAGGCTGTCCATCTaGCCGCCGCCAGAACTCCTCTCGGAAGATGATCTCATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: CQGHEQMLSGRRLSI*PPPELLSEDDLIAP
Trigger: AGGAGCTATGAGATCATCTTCCGAGAGGAGTTCTGGCGGCGGCCAGATGGACAGCCTGCGACCCGAGAGCATTTGCTCATGGCCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGTGACGAGGATTCAATGCGCACTGGGTGCACCACGCTCTGGGAGTaGGAGGGGCTGAGGGTCTGCTGGATGGTGACAAGGATAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GDEDSMRTGCTTLWE*EGLRVCWMVTRIEA
Trigger: AGCTTCTATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCCAGTGCGCATTGAATCCTCGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AGCGAAGGTGACGAGGATTCAATGCGCACTGGGTGCACCACGCTCTaGGAGTGGGAGGGGCTGAGGGTCTGCTGGATGGTGACAAGGATA +
Preference number: 5 (lower is better)
Translates to: SEGDEDSMRTGCTTL*EWEGLRVCWMVTRI
Trigger: TATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCCAGTGCGCATTGAATCCTCGTCACCTTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGCCGGGTGCCCACGATGGTAATGATGGAGCCGTTGGGGCTGATGTaGACGTTGTCCTCCAGCTCTTGGTCCCGAATCTTCCACTCAACC +
Preference number: 5 (lower is better)
Translates to: GRVPTMVMMEPLGLM*TLSSSSWSRIFHST
Trigger: GGTTGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATTACCATCGTGGGCACCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCAGCTCACGTACACAGCCTACAAAGCCGCTACTCAGCCCAGCCTTaGGGATGGCACCGTAGTCAGGGTAGCCACCCAGATACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AAHVHSLQSRYSAQP*GWHRSQGSHPDTAP
Trigger: AGGAGCTGTATCTGGGTGGCTACCCTGACTACGGTGCCATCCCCAAGGCTGGGCTGAGTAGCGGCTTTGTAGGCTGTGTACGTGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CTCTCGGAATCTTGGCACTGGCCCCCATTCTGGCAGGGTCGGTCCTaGCAAGTAGGGCAGTGGGAGATGCCATGTGTTGTGAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: LSESWHWPPFWQGRS*QVGQWEMPCVVRLT
Trigger: CGTCAACCTCACAACACATGGCATCTCCCACTGCCCTACTTGCCAGGACCGACCCTGCCAGAATGGGGGCCAGTGCCAAGATTCCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCACACCCTTGAAGTCATaGGGCTGGTCAAAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPATPLKS*GWSKLS
Trigger: ACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCCCTCCAGGGACTCTTTaGTCAGTGGCTGGCACCGGC +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASPPGTL*SVAGTG
Trigger: GCCGGTGCCAGCCACTGACAAAAGAGTCCCTGGAGG...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTCCAGAGTATGCCCATaGGCCAGCGAAGGTGACGAG +
Preference number: 5 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSRVCP*ASEGDE
Trigger: CTCGTCACCTTCGCTGGCCAATGGGCATACTCTGGA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAAGCTGCCTCCGCGCTaGTACCAGGTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: KFREPSEETSSSPLVLPTKLPPR*YQVMVW
Trigger: CCACACCATCACCTGGTACAAGCGCGGAGGCAGCTT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGGAGCTACCAGCCACTaGGCACACGTACTCGCCGGA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSGATSH*AHVLAG
Trigger: TCCGGCGAGTACGTGTGCCAAGTGGCTGGTAGCTCC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTGGGTGCCACGCTCATaGGGCACAGCACAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: KFREPSEETSSSPLVLPTWVPRS*GTAQWN
Trigger: GTTCCACTGTGCTGTGCCCAATGAGCGTGGCACCCA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACTCCGCTTCTGCCCATaGTACAGCAGCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLLRFCP*YSSIPS
Trigger: GGATGGGATGCTGCTGTACAATGGGCAGAAGCGGAG...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCGTGGCAGTGCAGGGCTaGCGAATGTTCACAGCGGCT +
Preference number: 5 (lower is better)
Translates to: KFREPSEETSSSPLVLPTVAVQG*RMFTAA
Trigger: AGCCGCTGTGAACATTCGCAAGCCCTGCACTGCCAC...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCCTGACTGGCACTGAGTaGGCACCCGAAGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: KFREPSEETSSSPLVLPTLTGTE*APEAER
Trigger: CCTCTCAGCTTCGGGTGCCAACTCAGTGCCAGTCAG...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS TCA 90 bp CACACAGTTGAGATCCAGCATGTGACCCTCAGTCACAGTGGAGGATaGGGCCTCAATTCTGACAGGAGGGGCAGGCCCAGGGGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: HTVEIQHVTLSHSGG*GLNSDRRGRPRGRD
Trigger: ATCCCTGCCCCTGGGCCTGCCCCTCCTGTCAGAATTGAGGCCTCATCCTCCACTGTGACTGAGGGTCACATGCTGGATCTCAACTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TGGATTCTGAGGACTCCATCTTGTACACTGTGTCCAGGAGGCAGCTaGCCGCCCTCCTTGAGCCAGCGAAGGTGGGTGCCACGCTCATTG +
Preference number: 5 (lower is better)
Translates to: WILRTPSCTLCPGGS*PPSLSQRRWVPRSL
Trigger: CAATGAGCGTGGCACCCACCTTCGCTGGCTCAAGGAGGGCGGTCAGCTGCCTCCTGGACACAGTGTACAAGATGGAGTCCTCAGAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CCGGGTTTTGCTTGCTCAGGTGGAACGAGCCGTCCGAGCACTCGTTaGACAAGCGCCCCACTACATTGTTCTTACAGCGGCAAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: PGFACSGGTSRPSTR*TSAPLHCSYSGKSP
Trigger: GGGAGACTTGCCGCTGTAAGAACAATGTAGTGGGGCGCTTGTGCAACGAGTGCTCGGACGGCTCGTTCCACCTGAGCAAGCAAAACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCTGATACCAGAGACCCTGCTCTCAGCCGGTTGCTGCGTGTAAGATaGTTGGATGAGGAGGGCATCAATGCCTGCCAGGGCCATCAGCAG +
Preference number: 5 (lower is better)
Translates to: ADTRDPALSRLLRVR*LDEEGINACQGHQQ
Trigger: CTGCTGATGGCCCTGGCAGGCATTGATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGGGTCTCTGGTATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGCATTCACACAACTCGCACTGACCAAGGTACAGTCCGCTCCCAGTaGGAGTGTAGCCCGGGGCACAGTCCTGGCAGGACAAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: CIHTTRTDQGTVRSQ*ECSPGHSPGRTSQH
Trigger: ATGTTGGCTTGTCCTGCCAGGACTGTGCCCCGGGCTACACTCGCACTGGGAGCGGACTGTACCTTGGTCAGTGCGAGTTGTGTGAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TTGGCCCCATGGTTGCGTGTGACCGTGACTGTGATGGTGGCTTCCTaGCCATTGCCTGCCCTGCACACATATTCTCCAGCATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LAPWLRVTVTVMVAS*PLPALHTYSPASAG
Trigger: CCCAGCAGATGCTGGAGAATATGTGTGCAGGGCAGGCAATGGGCAGGAAGCCACCATCACAGTCACGGTCACACGCAACCATGGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGCCCAGCAGAGTTGGTGGCGTTACAGATGTACTGTCCTGAGTCCTaGTGGGCCACCCGGGGAATGACCAGTGTGTTGCCTTCTATCCGG +
Preference number: 5 (lower is better)
Translates to: CPAELVALQMYCPES*WATRGMTSVLPSIR
Trigger: CCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp ACTTGGATGGAGCCTCTCTGGCCCTCTCGCAGCGCTGTTATCCGATaGCACTCGCCGTCATTGATGGGATCTTCTGAGACAAGACGGGCC +
Preference number: 5 (lower is better)
Translates to: TWMEPLWPSRSAVIR*HSPSLMGSSETRRA
Trigger: GGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTGCGAGAGGGCCAGAGAGGCTCCATCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCTCCAGCTTTTCTACCACAGCCTCCGACACCTCTCGGAACTCCTTaGCACTTGCATCCTCCAGCTGGGGGCTGTACTCAATGGACCGAG +
Preference number: 5 (lower is better)
Translates to: APAFLPQPPTPLGTP*HLHPPAGGCTQWTE
Trigger: CTCGGTCCATTGAGTACAGCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGTGTCGGAGGCTGTGGTAGAAAAGCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AGTCGGATTCCTCGTCACAGTGGAAGCTGGCTGGGATGCAGCGGTTaGTGGAGACACACTGGAAGTGCGTGGGCCCACATACTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SRIPRHSGSWLGCSG*WRHTGSAWAHILLQ
Trigger: CTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATCCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCAAACTCATCACTGCGGTCGGGACAGTCGGATTCCTCGTCACAGTaGAAGCTGGCTGGGATGCAGCGGTTGGTGGAGACACACTGGAAG +
Preference number: 5 (lower is better)
Translates to: PNSSLRSGQSDSSSQ*KLAGMQRLVETHWK
Trigger: CTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATCCGACTGTCCCGACCGCAGTGATGAGTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp ACCTTGTTGCCCAGAAACTGCTTGGGTAGGGCCCAGAAAGCATCGTaGACAAGGAAGCGGCGAGACAGGTCGACCAGCTGGAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: TLLPRNCLGRAQKAS*TRKRRDRSTSWNSC
Trigger: GCAGGAGTTCCAGCTGGTCGACCTGTCTCGCCGCTTCCTTGTCCACGATGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCAACAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AAGCGTCGATGTATGGGCAGGGACAGGGCCGGCAGGCAGTGGCTGTaGCCTTTGTGGCATCTCCAAAGAAGCCAGGCTTACACTTGTCAC +
Preference number: 5 (lower is better)
Translates to: KRRCMGRDRAGRQWL*PLWHLQRSQAYTCH
Trigger: GTGACAAGTGTAAGCCTGGCTTCTTTGGAGATGCCACAAAGGCCACAGCCACTGCCTGCCGGCCCTGTCCCTGCCCATACATCGACGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCAGCAGAGTTGGTGGCGTTACAGATGTACTGTCCTGAGTCCTGCTaGGCCACCCGGGGAATGACCAGTGTGTTGCCTTCTATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: PAELVALQMYCPESC*ATRGMTSVLPSIRC
Trigger: GCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TCTCCACATGCAGGACAACGGTGGCTTCAGTGTGCCCAGCAGAGTTaGTGGCGTTACAGATGTACTGTCCTGAGTCCTGCTGGGCCACCC +
Preference number: 5 (lower is better)
Translates to: SPHAGQRWLQCAQQS*WRYRCTVLSPAGPP
Trigger: GGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AACAGGGTCACGGTGTGGAACTGGCCTAGGGCCAGAGGTGTGGGGTaGCGGATAGTGGCCATGCCAGAGCCTGCATCAAATCGAAACTCA +
Preference number: 5 (lower is better)
Translates to: NRVTVWNWPRARGVG*RIVAMPEPASNRNS
Trigger: TGAGTTTCGATTTGATGCAGGCTCTGGCATGGCCACTATCCGCCACCCCACACCTCTGGCCCTAGGCCAGTTCCACACCGTGACCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CACGTACACAGCCTACAAAGCCGCTACTCAGCCCAGCCTTGGGGATaGCACCGTAGTCAGGGTAGCCACCCAGATACAGCTCCTCGTTCA +
Preference number: 5 (lower is better)
Translates to: HVHSLQSRYSAQPWG*HRSQGSHPDTAPRS
Trigger: TGAACGAGGAGCTGTATCTGGGTGGCTACCCTGACTACGGTGCCATCCCCAAGGCTGGGCTGAGTAGCGGCTTTGTAGGCTGTGTACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TACCTCACCCACACAGCCATGGAAGTGAGCACTCATATTGGTGGCTaGGGACAGCTGTACCGAGGGCTCCACACCACCCAGGTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: YLTHTAMEVSTHIGG*GQLYRGLHTTQVEQ
Trigger: CTGCTCTACCTGGGTGGTGTGGAGCCCTCGGTACAGCTGTCCCCAGCCACCAATATGAGTGCTCACTTCCATGGCTGTGTGGGTGAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAACCTCTCGGAACTCCTaGGCACTTGCATCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPTSRNS*ALASSS
Trigger: GCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGT...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GGGGTGTGGCCTGGTGTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTTGTATGCAGCACCTCTaGAATCTGAGATCCGTCCGC +
Preference number: 5 (lower is better)
Translates to: GVWPGVVGPHCWALPSDSCMQHL*NLRSVR
Trigger: GCGGACGGATCTCAGATTCAAGAGGTGCTGCATACA...AGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCACACCAGGCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CACAGCAATGAGGACTGTCCGCACGCACGGCCTGCTGAAGTGGGTGGCCCAGCCACTGGTTCCTCACAGTaGAGTTCATCAGACATGTCC +
Preference number: 5 (lower is better)
Translates to: HSNEDCPHARPAEVGGPATGSSQ*SSSDMS
Trigger: GGACATGTCTGATGAACTCAACTGTGAGGAACCAGT...GGCTGGGCCACCCACTTCAGCAGGCCGTGCGTGCGGACAGTCCTCATTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGAAGGGCACTATGAAGTaGCTGGGCTGGCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKKGTMK*LGWPGL
Trigger: CAGCCCTGGCCAGCCCAGCAACTTCATAGTGCCCTT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTCACTTGGCTGCACATaGCGAATGGTCAGGATGCCG +
Preference number: 5 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCSLGCT*RMVRMP
Trigger: CGGCATCCTGACCATTCGCAATGTGCAGCCAAGTGA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCTCCAGAGTATGCCCATaGGCCAGCGAAGGTGACGAG +
Preference number: 5 (lower is better)
Translates to: KFREPSEETSSSPLVLPTSRVCP*ASEGDE
Trigger: CTCGTCACCTTCGCTGGCCAATGGGCATACTCTGGA...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTATCTTCCACTCAACCTaGATGGGCGTTGCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCIFHST*MGVAPS
Trigger: CGAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGAT...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGGGCTGATGTGGACGTaGTCCTCCAGCTCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKGLMWT*SSSSWS
Trigger: GGACCAAGAGCTGGAGGACAACGTCCACATCAGCCC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGATCCCAGAAGAGAACTaGCCCCTGGTCAGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRIPEEN*PLVSVA
Trigger: GGCCACACTGACCAGGGGCAAGTTCTCTTCTGGGAT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TTCAGTGTGCCCAGCAGAGTTGGTGGCGTTACAGATGTACTGTCCTaGGTCCTGCTGGGCCACCCGGGGAATGACCAGTGTGTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: FSVPSRVGGVTDVLS*VLLGHPGNDQCVAF
Trigger: GAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GGAACTCAACGCTGGCCCCTATGTTCCGGGTCTCTAGCTGAGGAGTaGCTTGCACAGTGGGTGTGGATCCTCCTGGGATGGAAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: GTQRWPLCSGSLAEE*LAQWVWILLGWKCQ
Trigger: CTGACACTTCCATCCCAGGAGGATCCACACCCACTGTGCAAGTCACTCCTCAGCTAGAGACCCGGAACATAGGGGCCAGCGTTGAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GCACAGTGGAACTCAACGCTGGCCCCTATGTTCCGGGTCTCTAGCTaGGGAGTGACTTGCACAGTGGGTGTGGATCCTCCTGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: AQWNSTLAPMFRVSS*GVTCTVGVDPPGME
Trigger: TTCCATCCCAGGAGGATCCACACCCACTGTGCAAGTCACTCCTCAGCTAGAGACCCGGAACATAGGGGCCAGCGTTGAGTTCCACTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CAGCGCTGTTATCCGATGCCACTCGCCGTCATTGATGGGATCTTCTaGGACAAGACGGGCCTCCCCACTGCCCAGTTGGTAGCTGAACAC +
Preference number: 5 (lower is better)
Translates to: QRCYPMPLAVIDGIF*DKTGLPTAQLVAEH
Trigger: GTGTTCAGCTACCAACTGGGCAGTGGGGAGGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CACGAGGATCACATCTGGTTTCTGCACCGGCTCCAGCATGCCTCGTaGCAGTTCATAGCGCACCTTGTAGCGCAGGAAGCCTCCATAGGA +
Preference number: 5 (lower is better)
Translates to: HEDHIWFLHRLQHAS*QFIAHLVAQEASIG
Trigger: TCCTATGGAGGCTTCCTGCGCTACAAGGTGCGCTATGAACTGGCACGAGGCATGCTGGAGCCGGTGCAGAAACCAGATGTGATCCTCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCTTCTGTGCTGTGCCTAGGGCGTTCTGGGCTTGGCACACGTAGGTaGCTGCGTCTGATGGTTTCACGGATGCGATCTTCAGCATCGCAT +
Preference number: 5 (lower is better)
Translates to: ASVLCLGRSGLGTRR*LRLMVSRMRSSASH
Trigger: ATGCGATGCTGAAGATCGCATCCGTGAAACCATCAGACGCAGGCACCTACGTGTGCCAAGCCCAGAACGCCCTAGGCACAGCACAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCCTCCGACACCTCTCGGAACTCCTTGGCACTTGCATCCTCCAGCTaGGGGCTGTACTCAATGGACCGAGTAAAATTTACCAGAGCCCGG +
Preference number: 5 (lower is better)
Translates to: ASDTSRNSLALASSS*GLYSMDRVKFTRAR
Trigger: CCGGGCTCTGGTAAATTTTACTCGGTCCATTGAGTACAGCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGTGTCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TCACAGTGGAAGCTGGCTGGGATGCAGCGGTTGGTGGAGACACACTaGAAGTGCGTGGGCCCACATACTTCTCCAGGCTGCTTGACAGAA +
Preference number: 5 (lower is better)
Translates to: SQWKLAGMQRLVETH*KCVGPHTSPGCLTE
Trigger: TTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TTCACACCCTTGAAGTCATTGGGCTGGTCAAAGCTCAGTCGGATCTaGTCCCGGAAGCGCAGGCTGCTCTGGCACACGTTGGTCACACCA +
Preference number: 5 (lower is better)
Translates to: FTPLKSLGWSKLSRI*SRKRRLLWHTLVTP
Trigger: TGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CGGCAGCTTCCCATTGTGCAGACGGGTCCATACCAGGGTGTAGGCTaGGGATTTGCTCTTGGCCGTACAGATGAAAGTGACGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RQLPIVQTGPYQGVG*GFALGRTDESDVSS
Trigger: GGAGCTGACGTCACTTTCATCTGTACGGCCAAGAGCAAATCCCCAGCCTACACCCTGGTATGGACCCGTCTGCACAATGGGAAGCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GAGGGGCTGAGGGTCTGCTGGATGGTGACAAGGATAGAAGCTTCTTaGGTGCCCGAGCCACTGACGACTCGGCATACATACTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: EGLRVCWMVTRIEAS*VPEPLTTRHTYSPE
Trigger: CTCTGGAGAGTATGTATGCCGAGTCGTCAGTGGCTCGGGCACCCAAGAAGCTTCTATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CAGATACCTCACCCACACAGCCATGGAAGTGAGCACTCATATTGGTaGCTGGGGACAGCTGTACCGAGGGCTCCACACCACCCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: QIPHPHSHGSEHSYW*LGTAVPRAPHHPGR
Trigger: TCTACCTGGGTGGTGTGGAGCCCTCGGTACAGCTGTCCCCAGCCACCAATATGAGTGCTCACTTCCATGGCTGTGTGGGTGAGGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp TCACAGATACCTCACCCACACAGCCATGGAAGTGAGCACTCATATTaGTGGCTGGGGACAGCTGTACCGAGGGCTCCACACCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: SQIPHPHSHGSEHSY*WLGTAVPRAPHHPG
Trigger: ACCTGGGTGGTGTGGAGCCCTCGGTACAGCTGTCCCCAGCCACCAATATGAGTGCTCACTTCCATGGCTGTGTGGGTGAGGTATCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGGGATGTGGCCCCAGTaGAGCCTCCAGTTGATGATG +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASGMWPQ*SLQLMM
Trigger: CATCATCAACTGGAGGCTCAACTGGGGCCACATCCC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGCAGTTGGCTGTTGCGTaGAGGGTTCACCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRQLAVA*RVHQSK
Trigger: TTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTG...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAGTAGAAGGACTCTaGGCCGAGGTGGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPPVEGL*AEVGKV
Trigger: AACTTTGCCCACCTCGGCCAAGAGTCCTTCTACTGG...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCAACATGTTCTCTGGGTaGGTCAGCGGGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSNMFSG*VSGQAQ
Trigger: CTGTGCCTGCCCGCTGACCAACCCAGAGAACATGTT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGAGGCTGCCTCCTCTCTaGTGCCATGTGACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKRLPPL*CHVTWA
Trigger: TGCCCAAGTCACATGGCACAAGAGAGGAGGCAGCCT...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCAGGCTGCCTCCTCTCTaGTGCCATGTGACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSRLPPL*CHVTWA
Trigger: TGCCCAAGTCACATGGCACAAGAGAGGAGGCAGCCT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGACTCTCCAGAGTCAGTaGGGGTCACCTGGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRTLQSQ*GSPGEV
Trigger: GACTTCTCCAGGTGACCCCAACTGACTCTGGAGAGT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CCAAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCAACTCTCCAGAGTCAGTaGGGGTCACCTGGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: PSSGSLLRKPLPVPLSCPTLQSQ*GSPGEV
Trigger: GACTTCTCCAGGTGACCCCAACTGACTCTGGAGAGT...TGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAGAGGGTACTGTGAGCTaGAAGGAAGCCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLEGTVS*KEASCS
Trigger: TGAGCATGAGGCTTCCTTCAAGCTCACAGTACCCTC...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGACCCTGGGAGGTCCCGTaGACAGGGGCCAAATTGCCC +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGPWEVP*TGAKLP
Trigger: GGGCAATTTGGCCCCTGTCAACGGGACCTCCCAGGG...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCACAGGGGTGGCCACCAACCATaGCTAGGGACACAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: IPRSLPKLRSQLPPPSHRGGHQP*LGTQSL
Trigger: AAGACTTTGTGTCCCTAGCAATGGTTGGTGGCCACC...CCTGTGGCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AAGTTCCGGGAGCCTTCTGAGGAAACCTCTTCCAGTCCCCTTGTCCTGCCCACCAAAGTAGGCTCCGTATaGCCCAGGGGCATCATTGCC +
Preference number: 5 (lower is better)
Translates to: KFREPSEETSSSPLVLPTKVGSV*PRGIIA
Trigger: GGCAATGATGCCCCTGGGCAATACGGAGCCTACTTT...GGTGGGCAGGACAAGGGGACTGGAAGAGGTTTCCTCAGAAGGCTCCCGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGAAAGTAGGCTCCGTATaGCCCAGGGGCATCATTGCC +
Preference number: 5 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRKVGSV*PRGIIA
Trigger: GGCAATGATGCCCCTGGGCAATACGGAGCCTACTTT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCAGGCTAATGAAGTCCTaGCTGCGGCTGGCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASRLMKS*LRLASL
Trigger: GAGAGAGGCCAGCCGCAGCAAGGACTTCATTAGCCT...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTATGCCACTCGCCGTCATaGATGGGATCTTCTGAGACA +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLCHSPS*MGSSET
Trigger: TGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCA...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCATCCTCACCGTCTACTaGGATGGAGCCTCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: VVGPHCWALPSDSGKELVILTVY*DGASLA
Trigger: GGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGAT...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp GAGGTCCCGTTGACAGGGGCCAAATTGCCCACAATCAGAGATCCTTaGGTGAGGCTTCGTAACAGGGTCACGGTGTGGAACTGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: EVPLTGAKLPTIRDP*VRLRNRVTVWNWPR
Trigger: CCTAGGCCAGTTCCACACCGTGACCCTGTTACGAAGCCTCACTCAAGGATCTCTGATTGTGGGCAATTTGGCCCCTGTCAACGGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp AACCGCTTGCCATTCACAGATACCTCACCCACACAGCCATGGAAGTaGGCACTCATATTGGTGGCTGGGGACAGCTGTACCGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: NRLPFTDTSPTQPWK*ALILVAGDSCTEGS
Trigger: GGAGCCCTCGGTACAGCTGTCCCCAGCCACCAATATGAGTGCTCACTTCCATGGCTGTGTGGGTGAGGTATCTGTGAATGGCAAGCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp TGGAAGCTGGCTGGGATGCAGCGGTTGGTGGAGACACACTGGAAGTaGGTGGGCCCACATACTTCTCCAGGCTGCTTGACAGAACAATTG +
Preference number: 5 (lower is better)
Translates to: WKLAGMQRLVETHWK*VGPHTSPGCLTEQL
Trigger: CAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp AGCGCACCTTGTAGCGCAGGAAGCCTCCATAGGAGTCCACCTTGTTaGCCAGAAACTGCTTGGGTAGGGCCCAGAAAGCATCGTGGACAA +
Preference number: 5 (lower is better)
Translates to: SAPCSAGSLHRSPPC*PETAWVGPRKHRGQ
Trigger: TTGTCCACGATGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCAACAAGGTGGACTCCTATGGAGGCTTCCTGCGCTACAAGGTGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCAATCCTCAGGCGTCCCAGCCGTGGCATCTCCATAGTAACCAGTTaGACACAGCTCACAGAACTCACCGGCTGTGTTGTGCTGACATCG +
Preference number: 5 (lower is better)
Translates to: AILRRPSRGISIVTS*TQLTELTGCVVLTS
Trigger: CGATGTCAGCACAACACAGCCGGTGAGTTCTGTGAGCTGTGTGCAACTGGTTACTATGGAGATGCCACGGCTGGGACGCCTGAGGATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp ATGAAATCTGGCTGTCTGTTGGCTAGGTTGGTGGGACTCCGCTTCTaGCCATTGTACAGCAGCATCCCATCCGCAGAGTCTGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: MKSGCLLARLVGLRF*PLYSSIPSAESGRK
Trigger: CTTCCGGCCAGACTCTGCGGATGGGATGCTGCTGTACAATGGGCAGAAGCGGAGTCCCACCAACCTAGCCAACAGACAGCCAGATTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCACTTGAAACTGGCATCTTGGCCCTGCTGTACCGTGCTGCTGGGTaGTTCAATGGAGATGACGGGGCTTCTGAGGCGGAAGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: ALETGILALLYRAAG*FNGDDGASEAEGRV
Trigger: AACTCTTCCTTCCGCCTCAGAAGCCCCGTCATCTCCATTGAACCACCCAGCAGCACGGTACAGCAGGGCCAAGATGCCAGTTTCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGGAACTCCTTGGCACTaGCATCCTCCAGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGGTPWH*HPPAGG
Trigger: GCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGTCACAGCGCCACAACTaGAGAGCACAGTGCCCATTT +
Preference number: 5 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRSQRHN*RAQCPF
Trigger: AAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTGA...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGCAGTTGAGCCTCCAGTaGATGATGGGTGTGGGGACA +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKQLSLQ*MMGVGT
Trigger: TGTCCCCACACCCATCATCAACTGGAGGCTCAACTG...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AGTTGGTCTCCCTTGCAGCTCCTGAGGGCAGAGCCCTGGGCTGTGTGTGTGTGTTGGGCATCAATGTTGTaGTTGGCTCGGCACACATAC +
Preference number: 5 (lower is better)
Translates to: SWSPLQLLRAEPWAVCVCWASML*LARHTY
Trigger: GTATGTGTGCCGAGCCAACAACAACATTGATGCCCA...ACACACACACACAGCCCAGGGCTCTGCCCTCAGGAGCTGCAAGGGAGACCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCCATGCACGCTGAGATaGACGACACTCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSPCTLR*TTLWAI
Trigger: TATGGCCCAGAGTGTCGTCAATCTCAGCGTGCATGG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGTGTGCCCAGCAGAGTaGGTGGCGTTACAGATGTAC +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASVCPAE*VALQMY
Trigger: GTACATCTGTAACGCCACCAACTCTGCTGGGCACAC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GCATATGGAGGACTCTCCACATGCAGGACAACGGTGGCTTCAGTGTaGCCAGCAGAGTTGGTGGCGTTACAGATGTACTGTCCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: AYGGLSTCRTTVASV*PAELVALQMYCPES
Trigger: GGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGAGTCCTCCATATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CAGCTTCCCGCCATAGGCTGCCACCTTGTCTCCTTGGTATATTTCTaGCAGCTGCCAGTAGAAGGACTCTTGGCCGAGGTGGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: QLPAIGCHLVSLVYF*QLPVEGLLAEVGKV
Trigger: AACTTTGCCCACCTCGGCCAAGAGTCCTTCTACTGGCAGCTGCCAGAAATATACCAAGGAGACAAGGTGGCAGCCTATGGCGGGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AGCGAACATGTTGGAGCCAGTACACACGTAGGTGCCCGCGTCACTTaGCTGCACATTGCGAATGGTCAGGATGCCGTTGAAGTCCATAGC +
Preference number: 5 (lower is better)
Translates to: SEHVGASTHVGARVT*LHIANGQDAVEVHS
Trigger: GCTATGGACTTCAACGGCATCCTGACCATTCGCAATGTGCAGCCAAGTGACGCGGGCACCTACGTGTGTACTGGCTCCAACATGTTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GGAGATGAGGTCTCAATTCTCATTGGTGGGGAGACACTGGGCACATaGGATGGCCCTCTGCTCTCGATGGTAACGATGAGAGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GDEVSILIGGETLGT*DGPLLSMVTMREVS
Trigger: GGAGACCTCTCTCATCGTTACCATCGAGAGCAGAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAATGAGAATTGAGACCTCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GTGCCTGCGTCTGATGGTTTCACGGATGCGATCTTCAGCATCGCATaGCTATTCATGAGCCCAAACATCCGCGGCTCCAACTTGACAGGG +
Preference number: 5 (lower is better)
Translates to: VPASDGFTDAIFSIA*LFMSPNIRGSNLTG
Trigger: CCCTGTCAAGTTGGAGCCGCGGATGTTTGGGCTCATGAATAGCCATGCGATGCTGAAGATCGCATCCGTGAAACCATCAGACGCAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GAACCAGGTTCCCTGGCTGCGCCGAGGTATGTTCTGGAATTATGGTaGCATATGGAGGACTCTCCACATGCAGGACAACGGTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: EPGSLAAPRYVLELW*HMEDSPHAGQRWLQ
Trigger: CTGAAGCCACCGTTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCTGAACCAGGTTCCCTGGCTGCGCCGAGGTATGTTCTGGAATTATaGTGGCATATGGAGGACTCTCCACATGCAGGACAACGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: AEPGSLAAPRYVLEL*WHMEDSPHAGQRWL
Trigger: AAGCCACCGTTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GCACTGCAGCTGAACCAGGTTCCCTGGCTGCGCCGAGGTATGTTCTaGAATTATGGTGGCATATGGAGGACTCTCCACATGCAGGACAAC +
Preference number: 5 (lower is better)
Translates to: ALQLNQVPWLRRGMF*NYGGIWRTLHMQDN
Trigger: GTTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGTTCAGCTGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp ACCAATGTAGATGATGTCCTTGGTGTTGACCGCCACATTAGGACCTaGGGACCGGCCGGTGACCAGATCCTCACCGTCTACTTGGATGGA +
Preference number: 5 (lower is better)
Translates to: TNVDDVLGVDRHIRT*GPAGDQILTVYLDG
Trigger: TCCATCCAAGTAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCAGGTCCTAATGTGGCGGTCAACACCAAGGACATCATCTACATTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGTGTATGCAGCACCTCTaGAATCTGAGATCCGTCCGC +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKCMQHL*NLRSVR
Trigger: GCGGACGGATCTCAGATTCAAGAGGTGCTGCATACA...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TCCAGTCCAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTAACTGGTTCCTCACAGTaGAGTTCATCAGACATGTCC +
Preference number: 5 (lower is better)
Translates to: SSPAQGGSSEAWPCLSLLTGSSQ*SSSDMS
Trigger: GGACATGTCTGATGAACTCAACTGTGAGGAACCAGT...TAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTGGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGCTTGACAGAACAATaGGCCTCATCTGTCCGGTCC +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASCLTEQ*ASSVRS
Trigger: GGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTTCCCTCTAGGACCCAAGAGCCACAGTCTGGGCCTGCTTACCCCTTAGTCAGGACTTCTCCAGGCTGCTaGACAGAACAATTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VPSRTQEPQSGPAYPLVRTSPGC*TEQLAS
Trigger: TGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGT...CCTGACTAAGGGGTAAGCAGGCCCAGACTGTGGCTCTTGGGTCCTAGAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCGAGCTGGCATGGCCATaGCAATTACAGCCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSELAWP*QLQPEQ
Trigger: TTGCTCTGGCTGTAATTGCAATGGCCATGCCAGCTC...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCAGTTGGCTGTTGCGTaGAGGGTTCACCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSQLAVA*RVHQSK
Trigger: TTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGTCACTTGGCTGCACATaGCGAATGGTCAGGATGCCG +
Preference number: 5 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKSLGCT*RMVRMP
Trigger: CGGCATCCTGACCATTCGCAATGTGCAGCCAAGTGA...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAAGGTTGGCCCCATGGTaGCGTGTGACCGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGRLAPW*RVTVTV
Trigger: CACAGTCACGGTCACACGCAACCATGGGGCCAACCT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGAGGGTACTGTGAGCTaGAAGGAAGCCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKEGTVS*KEASCS
Trigger: TGAGCATGAGGCTTCCTTCAAGCTCACAGTACCCTC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCCTTCAGGCAGGCTCCTaGAGAAACTGTTACCAGGGA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSLQAGS*RNCYQG
Trigger: TCCCTGGTAACAGTTTCTCAAGGAGCCTGCCTGAAG...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp TGGTCCCGAATCTTCCACTCAACCTTGATGGGCGTTGCTCCCTCGTaGATAAGGCACTTGAAACTGGCATCTTGGCCCTGCTGTACCGTG +
Preference number: 5 (lower is better)
Translates to: WSRIFHSTLMGVAPS*IRHLKLASWPCCTV
Trigger: CACGGTACAGCAGGGCCAAGATGCCAGTTTCAAGTGCCTTATTCACGAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGATTCGGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp CATCAAATCGAAACTCAGGCCTTCCGCCCACGAGGCCAAAGGAGATaGAATCTGGCTGTCTGTTGGCTAGGTTGGTGGGACTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: HQIETQAFRPRGQRR*NLAVCWLGWWDSAS
Trigger: AGAAGCGGAGTCCCACCAACCTAGCCAACAGACAGCCAGATTTCATCTCCTTTGGCCTCGTGGGCGGAAGGCCTGAGTTTCGATTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GTGGAGACACACTGGAAGTGCGTGGGCCCACATACTTCTCCAGGCTaGTTGACAGAACAATTGGCCTCATCTGTCCGGTCCTCACAATCA +
Preference number: 5 (lower is better)
Translates to: VETHWKCVGPHTSPG*LTEQLASSVRSSQS
Trigger: TGATTGTGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp CTCCAGCTCTTGGTCCCGAATCTTCCACTCAACCTTGATGGGCGTTaGTCCCTCGTGAATAAGGCACTTGAAACTGGCATCTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LQLLVPNLPLNLDGR*SLVNKALETGILAL
Trigger: CAGGGCCAAGATGCCAGTTTCAAGTGCCTTATTCACGAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGATTCGGGACCAAGAGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 90 bp GAGGTATGTTCTGGAATTATGGTGGCATATGGAGGACTCTCCACATaGAGGACAACGGTGGCTTCAGTGTGCCCAGCAGAGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: EVCSGIMVAYGGLST*RTTVASVCPAELVA
Trigger: CGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CCATGTGTTGTGAGGTTGACGTCATGGAAGACAACCTCCTCGCCTTaGATACGCAGCTCACGTACACAGCCTACAAAGCCGCTACTCAGC +
Preference number: 5 (lower is better)
Translates to: PCVVRLTSWKTTSSP*IRSSRTQPTKPLLS
Trigger: GCTGAGTAGCGGCTTTGTAGGCTGTGTACGTGAGCTGCGTATCCAAGGCGAGGAGGTTGTCTTCCATGACGTCAACCTCACAACACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp CAAGTAGGGCAGTGGGAGATGCCATGTGTTGTGAGGTTGACGTCATaGAAGACAACCTCCTCGCCTTGGATACGCAGCTCACGTACACAG +
Preference number: 5 (lower is better)
Translates to: QVGQWEMPCVVRLTS*KTTSSPWIRSSRTQ
Trigger: CTGTGTACGTGAGCTGCGTATCCAAGGCGAGGAGGTTGTCTTCCATGACGTCAACCTCACAACACATGGCATCTCCCACTGCCCTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGCACTTCTCCAGGCTGCTaGACAGAACAATTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: IIIPRSLPKLRSQLPPPSTSPGC*TEQLAS
Trigger: TGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGT...GCTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGGTTCAGACAGGAGGTaGTGGAAGGAAGAGAACGAC +
Preference number: 5 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKGSDRR*WKEEND
Trigger: GTCGTTCTCTTCCTTCCACAACCTCCTGTCTGAACC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGCCCAGGGTGGTAGCAGCGAAGCGTGGCCTTGCCTCAGTCTCTTACAAAAAGGGTAGCATCAGCATATaGTTTTCCAGGCGACTGTCG +
Preference number: 5 (lower is better)
Translates to: QPRVVAAKRGLASVSYKKGSISI*FSRRLS
Trigger: CGACAGTCGCCTGGAAAACAATATGCTGATGCTACC...CTTTTTGTAAGAGACTGAGGCAAGGCCACGCTTCGCTGCTACCACCCTGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCGGTAGCATCAGCATATaGTTTTCCAGGCGACTGTCG +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASGSISI*FSRRLS
Trigger: CGACAGTCGCCTGGAAAACAATATGCTGATGCTACC...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp GTGGTGGGACCTCATTGCTGGGCTCTGCCTAGCGATTCTGGGAAAGAGTTGGTCTTGACAGGGGCCAAATaGCCCACAATCAGAGATCCT +
Preference number: 5 (lower is better)
Translates to: VVGPHCWALPSDSGKELVLTGAK*PTIRDP
Trigger: AGGATCTCTGATTGTGGGCAATTTGGCCCCTGTCAA...GACCAACTCTTTCCCAGAATCGCTAGGCAGAGCCCAGCAATGAGGTCCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTTGACAGGGGCCAAATaGCCCACAATCAGAGATCCT +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASLTGAK*PTIRDP
Trigger: AGGATCTCTGATTGTGGGCAATTTGGCCCCTGTCAA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGGTGGCCACCAACCATaGCTAGGGACACAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKGGHQP*LGTQSL
Trigger: AAGACTTTGTGTCCCTAGCAATGGTTGGTGGCCACC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAAGGCTAATGAAGTCCTaGCTGCGGCTGGCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGRLMKS*LRLASL
Trigger: GAGAGAGGCCAGCCGCAGCAAGGACTTCATTAGCCT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp TATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCACCAAGGTCACATTCACACCCTaGAAGTCATTGGGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: YHHPSFPSQAEVSAASTKVTFTP*KSLGWS
Trigger: TGACCAGCCCAATGACTTCAAGGGTGTGAATGTGAC...CTTGGTGGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGATCTAAACCTTGGAACTaGCCCTGGGAGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGSKPWN*PWEVPL
Trigger: CAACGGGACCTCCCAGGGCAAGTTCCAAGGTTTAGA...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp CAGGGTTATCATCATCCCTCGTTCCCTTCCCAAGCTGAGGTCTCAGCTGCCTCCTGCAACACCAGATTCTaGATACAGCCTGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: QGYHHPSFPSQAEVSAASCNTRF*IQPVIP
Trigger: TGGGATCACAGGCTGTATCAAGAATCTGGTGTTGCA...GGAGGCAGCTGAGACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 90 bp AGACACACTGGAAGTGCGTGGGCCCACATACTTCTCCAGGCTGCTTaGCAGAACAATTGGCCTCATCTGTCCGGTCCTCACAATCAAAGT +
Preference number: 5 (lower is better)
Translates to: RHTGSAWAHILLQAA*QNNWPHLSGPHNQS
Trigger: ACTTTGATTGTGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp AAGACCCAGCCATCCAGTTCCTTGATGAACACCACACTGACAATCTaGTCTCCGGGGATCTTCCTGTATTCGGGCTCCAGCTTTTCTACC +
Preference number: 5 (lower is better)
Translates to: KTQPSSSLMNTTLTI*SPGIFLYSGSSFST
Trigger: GGTAGAAAAGCTGGAGCCCGAATACAGGAAGATCCCCGGAGACCAGATTGTCAGTGTGGTGTTCATCAAGGAACTGGATGGCTGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 90 bp GAATTATGGTGGCATATGGAGGACTCTCCACATGCAGGACAACGGTaGCTTCAGTGTGCCCAGCAGAGTTGGTGGCGTTACAGATGTACT +
Preference number: 5 (lower is better)
Translates to: ELWWHMEDSPHAGQR*LQCAQQSWWRYRCT
Trigger: AGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAACACCCTTGAAGTCATaGGGCTGGTCAAAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGTPLKS*GWSKLS
Trigger: ACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGT...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp AATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCGTGGGAGTCACATTCACACCCTaGAAGTCATTGGGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: NNNILDTVRLGAAQESVGVTFTP*KSLGWS
Trigger: TGACCAGCCCAATGACTTCAAGGGTGTGAATGTGAC...TCCCACGGACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCGCAGGCTGCCATCTTaGTTCAGGCGTTCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSRRLPS*FRRSAD
Trigger: GTCTGCGGAACGCCTGAACAAAGATGGCAGCCTGCG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTATCCTCACCGTCTACTaGGATGGAGCCTCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSILTVY*DGASLA
Trigger: GGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGAT...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCAGTTGAGCCTCCAGTaGATGATGGGTGTGGGGACA +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSQLSLQ*MMGVGT
Trigger: TGTCCCCACACCCATCATCAACTGGAGGCTCAACTG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTTGCCCAGAAACTGCTaGGGTAGGGCCCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSLPRNC*GRAQKA
Trigger: TGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCAA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCCAGTAGAAGGACTCTaGGCCGAGGTGGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSPVEGL*AEVGKV
Trigger: AACTTTGCCCACCTCGGCCAAGAGTCCTTCTACTGG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTCTAAACCTTGGAACTaGCCCTGGGAGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSSKPWN*PWEVPL
Trigger: CAACGGGACCTCCCAGGGCAAGTTCCAAGGTTTAGA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCTTCAGGCAGGCTCCTaGAGAAACTGTTACCAGGGA +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSLQAGS*RNCYQG
Trigger: TCCCTGGTAACAGTTTCTCAAGGAGCCTGCCTGAAG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTCAGCCATCCAGTTCCTaGATGAACACCACACTGACA +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSQPSSS*MNTTLT
Trigger: TGTCAGTGTGGTGTTCATCAAGGAACTGGATGGCTG...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS-3UTR CAA 90 bp ATAATATTAATAATAATATACTCGACACTGTCAGGCTGGGTGCTGCCCAGGAGTTGCAACACCAGATTCTaGATACAGCCTGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: IILIIIYSTLSGWVLPRSCNTRF*IQPVIP
Trigger: TGGGATCACAGGCTGTATCAAGAATCTGGTGTTGCA...ACTCCTGGGCAGCACCCAGCCTGACAGTGTCGAGTATATTATTATTAATATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCCTGCCTGGGCGCGATGCTGCAGGTCCAGGGGCTGTaGAGGTGGGGCTCCAGGCCGGGCCGTGTGCAACAC +
Preference number: 6 (lower is better)
Translates to: PCLGAMLQVQGL*RWGSRPGRVQH
Trigger: GTGTTGCACACGGCCCGGCCTGGAGCCCCACCTCCACAGCCCCTGGACCTGCAGCATCGCGCCCAGGCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CGGGGAGGACGCCGCCCACAAGGCTCCACTGGTAGGTaGGCGGGGGCGTGCCGTGAGCCAGGCACTGCAGCT +
Preference number: 6 (lower is better)
Translates to: RGGRRPQGSTGR*AGACREPGTAA
Trigger: AGCTGCAGTGCCTGGCTCACGGCACGCCCCCGCTCACCTACCAGTGGAGCCTTGTGGGCGGCGTCCTCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCCCTCAGCCCATGCGTCACCGCTAGCAGCCGCGCGTaGAGCAGCAGCCCCAGCAGCAACGAGCCCACTGCC +
Preference number: 6 (lower is better)
Translates to: ALSPCVTASSRA*SSSPSSNEPTA
Trigger: GGCAGTGGGCTCGTTGCTGCTGGGGCTGCTGCTGCACGCGCGGCTGCTAGCGGTGACGCATGGGCTGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GTGGTGTGGGTGCCGGCGGCGTTGCTCAGGCTGAACTaGGAGGGCTGTTCCGAGGCCCCGAGCACCTGGGCG +
Preference number: 6 (lower is better)
Translates to: VVWVPAALLRLN*EGCSEAPSTWA
Trigger: CGCCCAGGTGCTCGGGGCCTCGGAACAGCCCTCTCAGTTCAGCCTGAGCAACGCCGCCGGCACCCACACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TCGACCAGCTGGAACTCCTGCAGGGCGGGGTCGATCTaGAGCTGGGTGGAGGAGAGGGGTGGCACGCCGGGC +
Preference number: 6 (lower is better)
Translates to: STSWNSCRAGSI*SWVEERGGTPG
Trigger: GCCCGGCGTGCCACCCCTCTCCTCCACCCAGCTGCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGTCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CGGGGGATGCAGTGTCCGCTGTGGCACGAGGCCTCCTaGGGCCCACAGGCTGAGGGCCCAGGAACACTGGGT +
Preference number: 6 (lower is better)
Translates to: RGMQCPLWHEAS*GPQAEGPGTLG
Trigger: ACCCAGTGTTCCTGGGCCCTCAGCCTGTGGGCCCCAGGAGGCCTCGTGCCACAGCGGACACTGCATCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GTCTGTAGCAGGACAGCCTCCAGGCTCGCCAGGGCCTaGAGCATCTCAGCCCGCTGGACAGGCCGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: VCSRTASRLARA*SISARWTGRPD
Trigger: GTCTGGCCGGCCTGTCCAGCGGGCTGAGATGCTGCAGGCCCTGGCGAGCCTGGAGGCTGTCCTGCTACAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GCCCAGGTGGCAGCGACAGGTGTAGCCTCGACCGTCTaGCCGGTTCACACAAGTGGCGTCCGGCCCACAGGC +
Preference number: 6 (lower is better)
Translates to: AQVAATGVASTV*PVHTSGVRPTG
Trigger: GCCTGTGGGCCGGACGCCACTTGTGTGAACCGGCCAGACGGTCGAGGCTACACCTGTCGCTGCCACCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GGGGCGCAGAACTGGGCCGGGGCCTCTGCGTCACAGTaGAGCGCAGCTCTCCGCCGTAGGACGTCACCTTGT +
Preference number: 6 (lower is better)
Translates to: GAQNWAGASASQ*SAALRRRTSPC
Trigger: ACAAGGTGACGTCCTACGGCGGAGAGCTGCGCTTCACTGTGACGCAGAGGCCCCGGCCCAGTTCTGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GCCAGGGCAGTGGGGCGCGCAGCTTGGACCAGTGGATaGTGGGTGGAGGGTTGCCCGTGGCTGAGCAGTGTA +
Preference number: 6 (lower is better)
Translates to: ARAVGRAAWTSG*WVEGCPWLSSV
Trigger: TACACTGCTCAGCCACGGGCAACCCTCCACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGGTGTAGCCTCGACCGTCTGGCCGGTTCACACAAGTaGCGTCCGGCCCACAGGCCTCGGGGTGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: RCSLDRLAGSHK*RPAHRPRGGSA
Trigger: TGCACTGCCACCCCGAGGCCTGTGGGCCGGACGCCACTTGTGTGAACCGGCCAGACGGTCGAGGCTACACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GCCGGCGTCGGAGGGCTGCACGCTAGGGAAGTGGAGCTCAGAGCCTaGATGCCGCTGTTGAGCGCTGCTGGGCAAGGGCCGTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: AGVGGLHAREVELRA*MPLLSAAGQGPSIF
Trigger: GAAGATGGACGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGCTCTGAGCTCCACTTCCCTAGCGTGCAGCCCTCCGACGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGGAAGCGGCGAGACAGGTCGACCAGCTGGAACTCCTaGAGGGCGGGGTCGATCTGCAGCTGGGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RKRRDRSTSWNS*RAGSICSWVEE
Trigger: CTCCTCCACCCAGCTGCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGTCGACCTGTCTCGCCGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGGCCCTCGCTGCGGGACAAGCTCCAGCACGCCGTCTaGAATGCCGAACACCATGCCACGCGAGTTCATGGC +
Preference number: 6 (lower is better)
Translates to: GPSLRDKLQHAV*NAEHHATRVHG
Trigger: GCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAGCTTGTCCCGCAGCGAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGGGGCACAGCTCTCACAGCGGCGGCCTGTGTAACCTaGGGCACAAGCGTCGCAAGTGGCTTGGCCGTCCGT +
Preference number: 6 (lower is better)
Translates to: RGTALTAAACVT*GTSVASGLAVR
Trigger: ACGGACGGCCAAGCCACTTGCGACGCTTGTGCCCCAGGTTACACAGGCCGCCGCTGTGAGAGCTGTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCTGGCTGGCACTGTTCACAGCTAGCACCCTCCGTGTaGTGCTGGCAGCTCTGGCACGCCCCTGTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PGWHCSQLAPSV*CWQLWHAPVSG
Trigger: GCCTGAGACAGGGGCGTGCCAGAGCTGCCAGCACCACACGGAGGGTGCTAGCTGTGAACAGTGCCAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp ACCTCGAGGGCTCGGGGTCCACTGGAGGGCCCTGGCTaGGCCACTTCTAGGCTCACGGCACTGATACTGGCT +
Preference number: 6 (lower is better)
Translates to: TSRARGPLEGPG*ATSRLTALILA
Trigger: AGCCAGTATCAGTGCCGTGAGCCTAGAAGTGGCCCAGCCAGGGCCCTCCAGTGGACCCCGAGCCCTCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGCACTGGAACTCATATTCGCCCGCAGGCATGCATGTaGCGCCATTCTGGCAGGGCTGGCGCTCGCACGGGG +
Preference number: 6 (lower is better)
Translates to: GTGTHIRPQACM*RHSGRAGARTG
Trigger: CCCCGTGCGAGCGCCAGCCCTGCCAGAATGGCGCCACATGCATGCCTGCGGGCGAATATGAGTTCCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GGAGGGCTGCACGCTAGGGAAGTGGAGCTCAGAGCCTaGATGCCGCTGTTGAGCGCTGCTGGGCAAGGGCCG +
Preference number: 6 (lower is better)
Translates to: GGLHAREVELRA*MPLLSAAGQGP
Trigger: CGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGCTCTGAGCTCCACTTCCCTAGCGTGCAGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GAGTCCTGCTGGGCCACCCGGGGAATGACCAGTGTGTaGCCTTCTATCCGGTGCTGCCAGGGCAGTGGGGCG +
Preference number: 6 (lower is better)
Translates to: ESCWATRGMTSV*PSIRCCQGSGA
Trigger: CGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCAGCGCTGCTGAGGGCACGGCACAGGTACTGGCCCTaGTCCGAGGGTTCAATGGCTGGCAAGCGCAGGATG +
Preference number: 6 (lower is better)
Translates to: PALLRARHRYWP*SEGSMAGKRRM
Trigger: CATCCTGCGCTTGCCAGCCATTGAACCCTCGGATCAGGGCCAGTACCTGTGCCGTGCCCTCAGCAGCGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp TGTCGGGTGGCAGGTCACCGTCCACCTTACTCCAGGTaGTGGCAGGCGTCGGGTAGCCTGAGGCCATGCACG +
Preference number: 6 (lower is better)
Translates to: CRVAGHRPPYSR*WQASGSLRPCT
Trigger: CGTGCATGGCCTCAGGCTACCCGACGCCTGCCATCACCTGGAGTAAGGTGGACGGTGACCTGCCACCCGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TGGTGGGCCTGCACTTCCCGCCAGGCTGGATGGGGTTaGCTTCATATCCAGGGGCACAGCTCTCACAGCGGC +
Preference number: 6 (lower is better)
Translates to: WWACTSRQAGWG*LHIQGHSSHSG
Trigger: GCCGCTGTGAGAGCTGTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GTGACGTCAGCTCCGGGCCGCACACTCTGGCTCCGCTaGTCCTCCACTGTCACTGTGATGGGCTTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: VTSAPGRTLWLR*SSTVTVMGLLG
Trigger: TCCCAGCAAGCCCATCACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGGAGCTGACGTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCCAGCGAAGGTGACGAGGATTCAATGCGCACTGGGTaGACCACGCTCTGGGAGTGGGAGGGGCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: ASEGDEDSMRTG*TTLWEWEGLRV
Trigger: GACCCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCCAGTGCGCATTGAATCCTCGTCACCTTCGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GGGCCCTCGGGGAGCACAGACACCGTAGGGGGCCCATaGACGCTGAGATTGACGACACTCTGGGCCATACCA +
Preference number: 6 (lower is better)
Translates to: GPSGSTDTVGGP*TLRLTTLWAIP
Trigger: TGGTATGGCCCAGAGTGTCGTCAATCTCAGCGTGCATGGGCCCCCTACGGTGTCTGTGCTCCCCGAGGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CGGGGAATGACCAGTGTGTTGCCTTCTATCCGGTGCTaGCAGGGCAGTGGGGCGCGCAGCTTGGACCAGTGG +
Preference number: 6 (lower is better)
Translates to: RGMTSVLPSIRC*QGSGARSLDQW
Trigger: CCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp ACCCGGGGAATGACCAGTGTGTTGCCTTCTATCCGGTaGTGCCAGGGCAGTGGGGCGCGCAGCTTGGACCAG +
Preference number: 6 (lower is better)
Translates to: TRGMTSVLPSIR*CQGSGARSLDQ
Trigger: CTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CACGTGGGACTGGGTGGTGCCCGCAGCGTTGGTAGCTaGACAGCGGTACTGTCCTGCATCAGCCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: HVGLGGARSVGS*TAVLSCISQLH
Trigger: GTGGAGCTGGCTGATGCAGGACAGTACCGCTGTGCAGCTACCAACGCTGCGGGCACCACCCAGTCCCACGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TCGTGGACAAGGAAGCGGCGAGACAGGTCGACCAGCTaGAACTCCTGCAGGGCGGGGTCGATCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SWTRKRRDRSTS*NSCRAGSICSW
Trigger: CCAGCTGCAGATCGACCCCGCCCTGCAGGAGTTCCAGCTGGTCGACCTGTCTCGCCGCTTCCTTGTCCACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCTGGGTGGTGGGCCTGCACTTCCCGCCAGGCTGGATaGGGTTGCCTTCATATCCAGGGGCACAGCTCTCAC +
Preference number: 6 (lower is better)
Translates to: PGWWACTSRQAG*GCLHIQGHSSH
Trigger: GTGAGAGCTGTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCACCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GCCTCCAAGGTCAGCTCAGATTCTTCAACTTGGACCTaGGGAGCCCCCGGGGCCACGGTGCCAGTGTCCACG +
Preference number: 6 (lower is better)
Translates to: ASKVSSDSSTWT*GAPGATVPVST
Trigger: CGTGGACACTGGCACCGTGGCCCCGGGGGCTCCCCAGGTCCAAGTTGAAGAATCTGAGCTGACCTTGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGGGCAGTGGGGCGCGCAGCTTGGACCAGTGGATGGTaGGTGGAGGGTTGCCCGTGGCTGAGCAGTGTAAAG +
Preference number: 6 (lower is better)
Translates to: RAVGRAAWTSGW*VEGCPWLSSVK
Trigger: CTTTACACTGCTCAGCCACGGGCAACCCTCCACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CAGTGTGTTGCCTTCTATCCGGTGCTGCCAGGGCAGTaGGGCGCGCAGCTTGGACCAGTGGATGGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: QCVAFYPVLPGQ*GAQLGPVDGGW
Trigger: CCACCCACCATCCACTGGTCCAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGGGACCGGCCGGTGACCAGATCCTCACCGTCTACTTaGATGGAGCCTCTCTGGCCCTCTCGCAGCGCTGTT +
Preference number: 6 (lower is better)
Translates to: GDRPVTRSSPST*MEPLWPSRSAV
Trigger: AACAGCGCTGCGAGAGGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGATCTGGTCACCGGCCGGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GTGGTGGGCCTGCACTTCCCGCCAGGCTGGATGGGGTaGCCTTCATATCCAGGGGCACAGCTCTCACAGCGG +
Preference number: 6 (lower is better)
Translates to: VVGLHFPPGWMG*PSYPGAQLSQR
Trigger: CCGCTGTGAGAGCTGTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp AGCAGCAGCACGTGGGACTGGGTGGTGCCCGCAGCGTaGGTAGCTGCACAGCGGTACTGTCCTGCATCAGCC +
Preference number: 6 (lower is better)
Translates to: SSSTWDWVVPAA*VAAQRYCPASA
Trigger: GGCTGATGCAGGACAGTACCGCTGTGCAGCTACCAACGCTGCGGGCACCACCCAGTCCCACGTGCTGCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TGGGGACCGGCCGGTGACCAGATCCTCACCGTCTACTaGGATGGAGCCTCTCTGGCCCTCTCGCAGCGCTGT +
Preference number: 6 (lower is better)
Translates to: WGPAGDQILTVY*DGASLALSQRC
Trigger: ACAGCGCTGCGAGAGGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp ATTTCCTGGGTGGTGGGCCTGCACTTCCCGCCAGGCTGGATGGGGTaGCCTTCATATCCAGGGGCACAGCTCTCACAGCGGCGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: ISWVVGLHFPPGWMG*PSYPGAQLSQRRPV
Trigger: CACAGGCCGCCGCTGTGAGAGCTGTGCCCCTGGATATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCACCCAGGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp TGGTGGGCTCCCACTGACCTGGCACCTCAGGGAGTGTGGGCCGCCTaGGGGAACCACGCTCCGAGATGGATGGATCTGAACCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: WWAPTDLAPQGVWAA*GNHAPRWMDLNLQG
Trigger: TCCCTGGAGGTTCAGATCCATCCATCTCGGAGCGTGGTTCCCCAAGGCGGCCCACACTCCCTGAGGTGCCAGGTCAGTGGGAGCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp TACTGTCCTGAGTCCTGCTGGGCCACCCGGGGAATGACCAGTGTGTaGCCTTCTATCCGGTGCTGCCAGGGCAGTGGGGCGCGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: YCPESCWATRGMTSV*PSIRCCQGSGARSL
Trigger: CAAGCTGCGCGCCCCACTGCCCTGGCAGCACCGGATAGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp AGCAAGTACCCAGGTAGGGCCCGCCAGGCACGCGGGTaGAGTGGGCATCGCAGCTCTCGCAAGACAAACCAG +
Preference number: 6 (lower is better)
Translates to: SKYPGRARQARG*SGHRSSRKTNQ
Trigger: CTGGTTTGTCTTGCGAGAGCTGCGATGCCCACTTCACCCGCGTGCCTGGCGGGCCCTACCTGGGTACTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GCTGGCGGGAGTAAGAGGAGCTGGCACACTGCTGGGTaGCACCCATGCAGAAACAGGGCAGGCAGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: AGGSKRSWHTAG*HPCRNRAGSLP
Trigger: CGGAAGGCTGCCTGCCCTGTTTCTGCATGGGTGTCACCCAGCAGTGTGCCAGCTCCTCTTACTCCCGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp AGGGCCCTGGCTGGGCCACTTCTAGGCTCACGGCACTaGTACTGGCTGCCCGTGGCACAGAGGAGAATGTGG +
Preference number: 6 (lower is better)
Translates to: RALAGPLLGSRH*YWLPVAQRRMW
Trigger: CCACATTCTCCTCTGTGCCACGGGCAGCCAGTATCAGTGCCGTGAGCCTAGAAGTGGCCCAGCCAGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CCAGAGCCCGGAAATAGACCATCTGGAAGTCCCCGCTaGCCACGTCTCCGCTGCCGAGGCCATCTCCTGATG +
Preference number: 6 (lower is better)
Translates to: PEPGNRPSGSPR*PRLRCRGHLLM
Trigger: CATCAGGAGATGGCCTCGGCAGCGGAGACGTGGGCAGCGGGGACTTCCAGATGGTCTATTTCCGGGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGTCTTCCTGTCCATCACAGAGGTAGTCTCGGGGGATaGAGTGTCCGCTGTGGCACGAGGCCTCCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SLPVHHRGSLGG*SVRCGTRPPGA
Trigger: GGCCCCAGGAGGCCTCGTGCCACAGCGGACACTGCATCCCCCGAGACTACCTCTGTGATGGACAGGAAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CTCGCTGCGGGACAAGCTCCAGCACGCCGTCTGGAATaGCGAACACCATGCCACGCGAGTTCATGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: LAAGQAPARRLE*RTPCHASSWPH
Trigger: GTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAGCTTGTCCCGCAGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TGGCACTCAGGTGGAAGTGGTGAGGTCGGCAGTGACTaGAAGTACGGCCCTCCACCTGGGCCTTGCACTGGC +
Preference number: 6 (lower is better)
Translates to: WHSGGSGEVGSD*KYGPPPGPCTG
Trigger: GCCAGTGCAAGGCCCAGGTGGAGGGCCGTACTTGCAGTCACTGCCGACCTCACCACTTCCACCTGAGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CTCCTTCCTCCAGGTGATGCTGGCACTGGGTACCCCTaGTGCCCTGCAGTACAGCCTCACTGTGCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LLPPGDAGTGYP*CPAVQPHCAAF
Trigger: GAAGGCCGCACAGTGAGGCTGTACTGCAGGGCAGCAGGGGTACCCAGTGCCAGCATCACCTGGAGGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp ACCTGGTGTAGTCTCAGCAGGGAACCATGGGTCTGGTaGCGGGCAGGAAGGCTGCCTCCACGTTTGCGCCAC +
Preference number: 6 (lower is better)
Translates to: TWCSLSREPWVW*RAGRLPPRLRH
Trigger: GTGGCGCAAACGTGGAGGCAGCCTTCCTGCCCGGCACCAGACCCATGGTTCCCTGCTGAGACTACACCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GGGGCCACGGTGCCAGTGTCCACGATCAGCTCCACTTaGTTCTGTGCTGTGCCTAGGGCGTTCTGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: GATVPVSTISST*FCAVPRAFWAW
Trigger: CCAAGCCCAGAACGCCCTAGGCACAGCACAGAAGCAAGTGGAGCTGATCGTGGACACTGGCACCGTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CCTTGCCCTGCCGGTTGGTGGCAGTGCACACGTAGGTaGCGGCATCCTCGGGGCGAACTGATGGTAGCATCA +
Preference number: 6 (lower is better)
Translates to: PCPAGWWQCTRR*RHPRGELMVAS
Trigger: TGATGCTACCATCAGTTCGCCCCGAGGATGCCGGCACCTACGTGTGCACTGCCACCAACCGGCAGGGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GACAGAGGCACTGGAACTCATATTCGCCCGCAGGCATaGATGTGGCGCCATTCTGGCAGGGCTGGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: DRGTGTHIRPQA*MWRHSGRAGAR
Trigger: GCGAGCGCCAGCCCTGCCAGAATGGCGCCACATGCATGCCTGCGGGCGAATATGAGTTCCAGTGCCTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGCCAGGCAGACAGAGGCATCGGGCACCCCGGCAGGTaGCACCATTCAGACATGGTTCATGCAGCTGGCACG +
Preference number: 6 (lower is better)
Translates to: SQADRGIGHPGR*HHSDMVHAAGT
Trigger: CGTGCCAGCTGCATGAACCATGTCTGAATGGTGGCACCTGCCGGGGTGCCCGATGCCTCTGTCTGCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CACTGTCTGGCCCCGGGAAGCCTGGATGGACTGCTGTaGAGGCGTCACTACCTGGGGAGGCATGCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: HCLAPGSLDGLL*RRHYLGRHAAK
Trigger: TTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTCCCGGGGCCAGACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TCTGGTCCCGGAAGCGCAGGCTGCTCTGGCACACGTTaGTCACACCAAAGCAGAAGCAGGGCAGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SGPGSAGCSGTR*SHQSRSRAGRR
Trigger: CCTCCTGCCTGCCCTGCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TGCAGCTGGGTGGAGGAGAGGGGTGGCACGCCGGGCTaGGAGGGCATCGTCACATTCACACCCTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: CSWVEERGGTPG*EGIVTFTPLKS
Trigger: TGACTTCAAGGGTGTGAATGTGACGATGCCCTCCCAGCCCGGCGTGCCACCCCTCTCCTCCACCCAGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGCGGCCTGTGTAACCTGGGGCACAAGCGTCGCAAGTaGCTTGGCCGTCCGTGTCCAGGAAGCAAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: GGLCNLGHKRRK*LGRPCPGSKCL
Trigger: CAGACACTTGCTTCCTGGACACGGACGGCCAAGCCACTTGCGACGCTTGTGCCCCAGGTTACACAGGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TGGCACGCCCCTGTCTCAGGCTCACAGGTCTCTGAGTaGCCATGGCAGTTACAGCGCTCACAGGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: WHAPVSGSQVSE*PWQLQRSQVPR
Trigger: CCTGGGCACCTGTGAGCGCTGTAACTGCCATGGCCACTCAGAGACCTGTGAGCCTGAGACAGGGGCGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TCACAGCTAGCACCCTCCGTGTGGTGCTGGCAGCTCTaGCACGCCCCTGTCTCAGGCTCACAGGTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SQLAPSVWCWQL*HAPVSGSQVSE
Trigger: CTCAGAGACCTGTGAGCCTGAGACAGGGGCGTGCCAGAGCTGCCAGCACCACACGGAGGGTGCTAGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TGGCACTGTTCACAGCTAGCACCCTCCGTGTGGTGCTaGCAGCTCTGGCACGCCCCTGTCTCAGGCTCACAG +
Preference number: 6 (lower is better)
Translates to: WHCSQLAPSVWC*QLWHAPVSGSQ
Trigger: CTGTGAGCCTGAGACAGGGGCGTGCCAGAGCTGCCAGCACCACACGGAGGGTGCTAGCTGTGAACAGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp ATGTTCTCTGGGTTGGTCAGCGGGCAGGCACAGGGCTaGCAATCCTCAGGCGTCCCAGCCGTGGCATCTCCA +
Preference number: 6 (lower is better)
Translates to: MFSGLVSGQAQG*QSSGVPAVASP
Trigger: TGGAGATGCCACGGCTGGGACGCCTGAGGATTGCCAGCCCTGTGCCTGCCCGCTGACCAACCCAGAGAACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GAACTCAGCCTGTTGTCCCGGCTGCACGGTGAGCTGTaGAGGGTGTATGGAGGCCACAGGGGCAGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: ELSLLSRLHGEL*RVYGGHRGSGG
Trigger: ACCTCCACTGCCCCTGTGGCCTCCATACACCCTCCACAGCTCACCGTGCAGCCGGGACAACAGGCTGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GACGAGGATTCAATGCGCACTGGGTGCACCACGCTCTaGGAGTGGGAGGGGCTGAGGGTCTGCTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: DEDSMRTGCTTL*EWEGLRVCWMV
Trigger: CACCATCCAGCAGACCCTCAGCCCCTCCCACTCCCAGAGCGTGGTGCACCCAGTGCGCATTGAATCCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GACACACGGTTCAGTCTCAGCATGTGGCCATGGACCTaGTGCCCAGCGGGCAGGCTGCCTCCACGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: DTRFSLSMWPWT*CPAGRLPPRLC
Trigger: GCACAAACGTGGAGGCAGCCTGCCCGCTGGGCACCAGGTCCATGGCCACATGCTGAGACTGAACCGTGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CGCTGCCACGCTTGCTCTTGGAAGGGCACTATGAAGTaGCTGGGCTGGCCAGGGCTGGGATCCCTCGAGGCA +
Preference number: 6 (lower is better)
Translates to: RCHACSWKGTMK*LGWPGLGSLEA
Trigger: TGCCTCGAGGGATCCCAGCCCTGGCCAGCCCAGCAACTTCATAGTGCCCTTCCAAGAGCAAGCGTGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCCACTGACCTGGCACCTCAGGGAGTGTGGGCCGCCTaGGGGAACCACGCTCCGAGATGGATGGATCTGAAC +
Preference number: 6 (lower is better)
Translates to: PTDLAPQGVWAA*GNHAPRWMDLN
Trigger: GTTCAGATCCATCCATCTCGGAGCGTGGTTCCCCAAGGCGGCCCACACTCCCTGAGGTGCCAGGTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCCTCCTTGAGCCAGCGAAGGTGGGTGCCACGCTCATaGGGCACAGCACAGTGGAACTCAACGCTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: PSLSQRRWVPRS*GTAQWNSTLAP
Trigger: AGGGGCCAGCGTTGAGTTCCACTGTGCTGTGCCCAATGAGCGTGGCACCCACCTTCGCTGGCTCAAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ACAGGACGCCCTCCATCCACCCGCAGGCTGCCATCTTaGTTCAGGCGTTCCGCAGACACTCGGTGCCAGCGT +
Preference number: 6 (lower is better)
Translates to: TGRPPSTRRLPS*FRRSADTRCQR
Trigger: ACGCTGGCACCGAGTGTCTGCGGAACGCCTGAACAAAGATGGCAGCCTGCGGGTGGATGGAGGGCGTCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp AGAGTGCACGGAGGTTCGGACGTTGATGAGCACGGAGGGCAAGGCTaGAACGATCAGCTGGGCAGTGGCCTGGGCTTGTCCCCAAGGCCC +
Preference number: 6 (lower is better)
Translates to: RVHGGSDVDEHGGQG*NDQLGSGLGLSPRP
Trigger: GGGCCTTGGGGACAAGCCCAGGCCACTGCCCAGCTGATCGTTCAAGCCTTGCCCTCCGTGCTCATCAACGTCCGAACCTCCGTGCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GCTTGTACTAGCAGCAGCACGTGGGACTGGGTGGTGCCCGCAGCGTaGGTAGCTGCACAGCGGTACTGTCCTGCATCAGCCAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: ACTSSSTWDWVVPAA*VAAQRYCPASASST
Trigger: CGTGGAGCTGGCTGATGCAGGACAGTACCGCTGTGCAGCTACCAACGCTGCGGGCACCACCCAGTCCCACGTGCTGCTGCTAGTACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CACGGAGGGCAAGGCTTGAACGATCAGCTGGGCAGTGGCCTGGGCTaGTCCCCAAGGCCCATGGGCCTGACAGACATATGTCCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: HGGQGLNDQLGSGLG*SPRPMGLTDICPLA
Trigger: TGCCAAGGGACATATGTCTGTCAGGCCCATGGGCCTTGGGGACAAGCCCAGGCCACTGCCCAGCTGATCGTTCAAGCCTTGCCCTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGAAGACAGCCGCAGAACCGGCAGGCACTCGGATCTCCGGGGGAGTaGAGATCTGGGGCAAGGCTTGTACTAGCAGCAGCACGTGGGACT +
Preference number: 6 (lower is better)
Translates to: GRQPQNRQALGSPGE*RSGARLVLAAARGT
Trigger: AGTCCCACGTGCTGCTGCTAGTACAAGCCTTGCCCCAGATCTCAACTCCCCCGGAGATCCGAGTGCCTGCCGGTTCTGCGGCTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GAGCGTAACACAGGACGCCCTCCATCCACCCGCAGGCTGCCATCTTaGTTCAGGCGTTCCGCAGACACTCGGTGCCAGCGTCCTAAGGTC +
Preference number: 6 (lower is better)
Translates to: ERNTGRPPSTRRLPS*FRRSADTRCQRPKV
Trigger: GACCTTAGGACGCTGGCACCGAGTGTCTGCGGAACGCCTGAACAAAGATGGCAGCCTGCGGGTGGATGGAGGGCGTCCTGTGTTACGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCCGCTGCCCACGTCTCCGCTGCCGAGGCCATCTCCTaGTGCATCATCTGCCAGCAGGTCCTCATCATCAGA +
Preference number: 6 (lower is better)
Translates to: PAAHVSAAEAIS*CIICQQVLIIR
Trigger: TCTGATGATGAGGACCTGCTGGCAGATGATGCATCAGGAGATGGCCTCGGCAGCGGAGACGTGGGCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GCACACTCTGGCTCCGCTGCTCCTCCACTGTCACTGTaGTGGGCTTGCTGGGAGCCTCAGCGACCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: AHSGSAAPPLSL*WACWEPQRPVA
Trigger: AGCTACTGGTCGCTGAGGCTCCCAGCAAGCCCATCACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp TCAATGGCTGGCAAGCGCAGGATGCCGTTGTGGATCTaGGCCTTCGCAGGAAGCTGGCCGCTAGGACCCCCT +
Preference number: 6 (lower is better)
Translates to: SMAGKRRMPLWI*AFAGSWPLGPP
Trigger: AGGGGGTCCTAGCGGCCAGCTTCCTGCGAAGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAGCCATTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GATTCTATCCTGACTGGCACTGAGAGGACGACCACCTaGATGCGTGCCTGGGCGGTGCCTGTGGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: DSILTGTERTTT*MRAWAVPVGLV
Trigger: CACCAGCCCCACAGGCACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGTGCCAGTCAGGATAGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS GCA 72 bp AGACCATCTGGAAGTCCCCGCTGCCCACGTCTCCGCTaGCGAGGCCATCTCCTGATGCATCATCTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RPSGSPRCPRLR*RGHLLMHHLPA
Trigger: TGCTGGCAGATGATGCATCAGGAGATGGCCTCGGCAGCGGAGACGTGGGCAGCGGGGACTTCCAGATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AAAGTCACTGTCTGGCCCCGGGAAGCCTGGATGGACTaGTGTGGAGGCGTCACTACCTGGGGAGGCATGCAG +
Preference number: 6 (lower is better)
Translates to: KVTVWPREAWMD*CGGVTTWGGMQ
Trigger: CTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTCCCGGGGCCAGACAGTGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp ACAACTCGCACTGACCAAGGTACAGTCCGCTCCCAGTaGGAGTGTAGCCCGGGGCACAGTCCTGGCAGGACA +
Preference number: 6 (lower is better)
Translates to: TTRTDQGTVRSQ*ECSPGHSPGRT
Trigger: TGTCCTGCCAGGACTGTGCCCCGGGCTACACTCGCACTGGGAGCGGACTGTACCTTGGTCAGTGCGAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGTGGAGCTCAGAGCCTTGATGCCGCTGTTGAGCGCTaGTGGGCAAGGGCCGTCCATCTTCACGGGACCAGT +
Preference number: 6 (lower is better)
Translates to: SGAQSLDAAVER*WARAVHLHGTS
Trigger: ACTGGTCCCGTGAAGATGGACGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGCTCTGAGCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCCGTTACTGACGTGACACACATACTCTCCGGAGTCTaGTGGGGTCACTTGAGGGATCCGGAGGCGGGAGCC +
Preference number: 6 (lower is better)
Translates to: AVTDVTHILSGV*WGHLRDPEAGA
Trigger: GGCTCCCGCCTCCGGATCCCTCAAGTGACCCCAGCAGACTCCGGAGAGTATGTGTGTCACGTCAGTAACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp ACACGGTTCAGTCTCAGCATGTGGCCATGGACCTGGTaGCCAGCGGGCAGGCTGCCTCCACGTTTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: TRFSLSMWPWTW*PAGRLPPRLCH
Trigger: ATGGCACAAACGTGGAGGCAGCCTGCCCGCTGGGCACCAGGTCCATGGCCACATGCTGAGACTGAACCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TCTGCCCCTCAGCCACTCGGGAGGAGGAAGTCTCGATaGGGATGGGCGGGAAAGGAACCTCACCAGGGATGT +
Preference number: 6 (lower is better)
Translates to: SAPQPLGRRKSR*GWAGKEPHQGC
Trigger: ACATCCCTGGTGAGGTTCCTTTCCCGCCCATCCGCATCGAGACTTCCTCCTCCCGAGTGGCTGAGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS GCA 72 bp TCACAGCTGCCCGCCACTGTTCCTCTGAGAGGGATGTaGGGTTCTGGTGAGCCCGGCGTAGCCGTGCAAACT +
Preference number: 6 (lower is better)
Translates to: SQLPATVPLRGM*GSGEPGVAVQT
Trigger: AGTTTGCACGGCTACGCCGGGCTCACCAGAACCGCACATCCCTCTCAGAGGAACAGTGGCGGGCAGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238544.2
CDS CCA 72 bp CTCAGTCGGATCTGGTCCCGGAAGCGCAGGCTGCTCTaGCACACGTTGGTCACACCAAAGCAGAAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LSRIWSRKRRLL*HTLVTPKQKQG
Trigger: GCCCTGCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CACTTGAGGCAGCCGTCCGGGTTTTGCTTGCTCAGGTaGAACGAGCCGTCCGAGCACTCGTTGCACAAGCGC +
Preference number: 6 (lower is better)
Translates to: HLRQPSGFCLLR*NEPSEHSLHKR
Trigger: GCGCTTGTGCAACGAGTGCTCGGACGGCTCGTTCCACCTGAGCAAGCAAAACCCGGACGGCTGCCTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGGCAGGTACACTGCTCTACTTCCCGGGCTGAGTCCTaGCCGGTGTTCTCTGGCACAGCCACATCCATGCTG +
Preference number: 6 (lower is better)
Translates to: GQVHCSTSRAES*PVFSGTATSML
Trigger: CAGCATGGATGTGGCTGTGCCAGAGAACACCGGCCAGGACTCAGCCCGGGAAGTAGAGCAGTGTACCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CTGTGGTGTGCCCCGTTGGGCATCCCCATAGTACCCTaGCTGGCACTGTTCACAGCTAGCACCCTCCGTGTG +
Preference number: 6 (lower is better)
Translates to: LWCAPLGIPIVP*LALFTASTLRV
Trigger: CACACGGAGGGTGCTAGCTGTGAACAGTGCCAGCCAGGGTACTATGGGGATGCCCAACGGGGCACACCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGAGCTCAGAGCCTTGATGCCGCTGTTGAGCGCTGCTaGGCAAGGGCCGTCCATCTTCACGGGACCAGTAGA +
Preference number: 6 (lower is better)
Translates to: GAQSLDAAVERC*ARAVHLHGTSR
Trigger: TCTACTGGTCCCGTGAAGATGGACGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGCTCTGAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CAGATGAAAGTGACGTCAGCTCCGGGCCGCACACTCTaGCTCCGCTGCTCCTCCACTGTCACTGTGATGGGC +
Preference number: 6 (lower is better)
Translates to: QMKVTSAPGRTL*LRCSSTVTVMG
Trigger: GCCCATCACAGTGACAGTGGAGGAGCAGCGGAGCCAGAGTGTGCGGCCCGGAGCTGACGTCACTTTCATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGGTCACCCAGGGCCAAGCACTCAAACTCCACAGAGTaGCCGACTACCACAGAGTGCACGGAGGTTCGGACG +
Preference number: 6 (lower is better)
Translates to: GSPRAKHSNSTE*PTTTECTEVRT
Trigger: CGTCCGAACCTCCGTGCACTCTGTGGTAGTCGGCCACTCTGTGGAGTTTGAGTGCTTGGCCCTGGGTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ATCTGGTCCCGGAAGCGCAGGCTGCTCTGGCACACGTaGGTCACACCAAAGCAGAAGCAGGGCAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: IWSRKRRLLWHT*VTPKQKQGRQE
Trigger: CTCCTGCCTGCCCTGCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GCTAGGGAAGTGGAGCTCAGAGCCTTGATGCCGCTGTaGAGCGCTGCTGGGCAAGGGCCGTCCATCTTCACG +
Preference number: 6 (lower is better)
Translates to: AREVELRALMPL*SAAGQGPSIFT
Trigger: CGTGAAGATGGACGGCCCTTGCCCAGCAGCGCTCAACAGCGGCATCAAGGCTCTGAGCTCCACTTCCCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CTGGGCCGGGTGCCCACGATGGTAATGATGGAGCCGTaGGGGCTGATGTGGACGTTGTCCTCCAGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: LGRVPTMVMMEP*GLMWTLSSSSW
Trigger: CCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATTACCATCGTGGGCACCCGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GGAGGTTCGGACGTTGATGAGCACGGAGGGCAAGGCTaGAACGATCAGCTGGGCAGTGGCCTGGGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: GGSDVDEHGGQG*NDQLGSGLGLS
Trigger: GGACAAGCCCAGGCCACTGCCCAGCTGATCGTTCAAGCCTTGCCCTCCGTGCTCATCAACGTCCGAACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCGCAGAACCGGCAGGCACTCGGATCTCCGGGGGAGTaGAGATCTGGGGCAAGGCTTGTACTAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PQNRQALGSPGE*RSGARLVLAAA
Trigger: TGCTGCTGCTAGTACAAGCCTTGCCCCAGATCTCAACTCCCCCGGAGATCCGAGTGCCTGCCGGTTCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GCGGGCCCCATCGTGCACTGGTTCCACGGTGAAGCCCCCTGTCAGTaGGCTGTTGCGTTGAGGGTTCACCAGAGCAAAGCCTTGGAAGTC +
Preference number: 6 (lower is better)
Translates to: AGPIVHWFHGEAPCQ*AVALRVHQSKALEV
Trigger: GACTTCCAAGGCTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CAA 90 bp CCATGGTTGCTGGGCCGGGTGCCCACGATGGTAATGATGGAGCCGTaGGGGCTGATGTGGACGTTGTCCTCCAGCTCTTGGTCCCGAATC +
Preference number: 6 (lower is better)
Translates to: PWLLGRVPTMVMMEP*GLMWTLSSSSWSRI
Trigger: GATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATTACCATCGTGGGCACCCGGCCCAGCAACCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GAAGCCAGCAGGGCAGACACACGTGTAACTGCTGCTCTCGGAATCTaGGCACTGGCCCCCATTCTGGCAGGGTCGGTCCTGGCAAGTAGG +
Preference number: 6 (lower is better)
Translates to: EASRADTRVTAALGI*ALAPILAGSVLASR
Trigger: CCTACTTGCCAGGACCGACCCTGCCAGAATGGGGGCCAGTGCCAAGATTCCGAGAGCAGCAGTTACACGTGTGTCTGCCCTGCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTCTGGCCCTCTCGCAGCGCTGTTATCCGATGCCACTCGCCGTCATaGATGGGATCTTCTGAGACAAGACGGGCCTCCCCACTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: LWPSRSAVIRCHSPS*MGSSETRRASPLPS
Trigger: ACTGGGCAGTGGGGAGGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTGCGAGAGGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp ATTAGGACCTGGGGACCGGCCGGTGACCAGATCCTCACCGTCTACTaGGATGGAGCCTCTCTGGCCCTCTCGCAGCGCTGTTATCCGATG +
Preference number: 6 (lower is better)
Translates to: IRTWGPAGDQILTVY*DGASLALSQRCYPM
Trigger: CATCGGATAACAGCGCTGCGAGAGGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCAGGTCCTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GACTCGTGGACCCAGTGTTCCTCTGAGAGCTGGACCTaGCGCTGGTTCAGAGTTCCAGGATGGGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: DSWTQCSSESWT*RWFRVPGWVGV
Trigger: CACCCCCACCCATCCTGGAACTCTGAACCAGCGTCAGGTCCAGCTCTCAGAGGAACACTGGGTCCACGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCCCACTACATTGTTCTTACAGCGGCAAGTCTCCCCTaGGGTGCCCAGGCTCCCTCGCTCATCACAGCGCAC +
Preference number: 6 (lower is better)
Translates to: PHYIVLTAASLP*GAQAPSLITAH
Trigger: GTGCGCTGTGATGAGCGAGGGAGCCTGGGCACCTCAGGGGAGACTTGCCGCTGTAAGAACAATGTAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CACGGATGGCGACGAGGATTCTATCCTGACTGGCACTaGGAGGACGACCACCTGAATGCGTGCCTGGGCGGT +
Preference number: 6 (lower is better)
Translates to: HGWRRGFYPDWH*EDDHLNACLGG
Trigger: ACCGCCCAGGCACGCATTCAGGTGGTCGTCCTCTCAGTGCCAGTCAGGATAGAATCCTCGTCGCCATCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS TCA 72 bp CGCTGGCCCCTATGTTCCGGGTCTCTAGCTGAGGAGTaGCTTGCACAGTGGGTGTGGATCCTCCTGGGATGG +
Preference number: 6 (lower is better)
Translates to: RWPLCSGSLAEE*LAQWVWILLGW
Trigger: CCATCCCAGGAGGATCCACACCCACTGTGCAAGTCACTCCTCAGCTAGAGACCCGGAACATAGGGGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp AGGACTCCATCTTGTACACTGTGTCCAGGAGGCAGCTaGCCGCCCTCCTTGAGCCAGCGAAGGTGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: RTPSCTLCPGGS*PPSLSQRRWVP
Trigger: TGGCACCCACCTTCGCTGGCTCAAGGAGGGCGGTCAGCTGCCTCCTGGACACAGTGTACAAGATGGAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GGCCGTAGGTGTCCCCCGACTTTGCTCCATGTCACCTaGGGCTTAGGGTCACCCAGGGCCAAGCACTCAAAC +
Preference number: 6 (lower is better)
Translates to: GRRCPPTLLHVT*GLGSPRAKHSN
Trigger: GTTTGAGTGCTTGGCCCTGGGTGACCCTAAGCCTCAGGTGACATGGAGCAAAGTCGGGGGACACCTACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CACAGCCTCCGACACCTCTCGGAACTCCTTGGCACTTaGATCCTCCAGCTGGGGGCTGTACTCAATGGACCG +
Preference number: 6 (lower is better)
Translates to: HSLRHLSELLGT*ILQLGAVLNGP
Trigger: CGGTCCATTGAGTACAGCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGTGTCGGAGGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CGAGTTCATGGCCTCACAGGTGTATGCGCCCTGGTCTaGCTCCTTCACGTCACGGATGATCAGCGTGCCACG +
Preference number: 6 (lower is better)
Translates to: RVHGLTGVCALV*LLHVTDDQRAT
Trigger: CGTGGCACGCTGATCATCCGTGACGTGAAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CAAGCTCCAGCACGCCGTCTGGAATGCCGAACACCATaGCACGCGAGTTCATGGCCTCACAGGTGTATGCGC +
Preference number: 6 (lower is better)
Translates to: QAPARRLECRTP*HASSWPHRCMR
Trigger: GCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACGGCGTGCTGGAGCTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCTCATCACAGCGCACAATTTCCTGGGTGGTGGGCCTaGACTTCCCGCCAGGCTGGATGGGGTTGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: AHHSAQFPGWWA*TSRQAGWGCLH
Trigger: ATGAAGGCAACCCCATCCAGCCTGGCGGGAAGTGCAGGCCCACCACCCAGGAAATTGTGCGCTGTGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TGGGCAAAGTTGCTGAAAGAGAGGCGGGCCCCATCGTaGACTGGTTCCACGGTGAAGCCCCCTGTCAGTTGG +
Preference number: 6 (lower is better)
Translates to: WAKLLKERRAPS*TGSTVKPPVSW
Trigger: CCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCCCGCCTCTCTTTCAGCAACTTTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS GCA 72 bp AGAAGTTCATCCAGATCTGCCAGGGCCATGAGCAAATaGTCTCGGGTCGCAGGCTGTCCATCTGGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RSSSRSARAMSK*SRVAGCPSGRR
Trigger: GCGGCGGCCAGATGGACAGCCTGCGACCCGAGAGCATTTGCTCATGGCCCTGGCAGATCTGGATGAACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CCTGATCCGAGGGTTCAATGGCTGGCAAGCGCAGGATaGCGTTGTGGATCTGAGCCTTCGCAGGAAGCTGGC +
Preference number: 6 (lower is better)
Translates to: PDPRVQWLASAG*RCGSEPSQEAG
Trigger: GCCAGCTTCCTGCGAAGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GATTCGGACTGGAGGGATGACCCCAGGTGCAGTGCCTaGAGGCTCAATGGTCACCAGGACAGAGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: DSDWRDDPRCSA*RLNGHQDRALQ
Trigger: CTGGAGAGCTCTGTCCTGGTGACCATTGAGCCTGCAGGCACTGCACCTGGGGTCATCCCTCCAGTCCGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TATGCCCATTGGCCAGCGAAGGTGACGAGGATTCAATaGGCACTGGGTGCACCACGCTCTGGGAGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: YAHWPAKVTRIQ*ALGAPRSGSGR
Trigger: CCTCCCACTCCCAGAGCGTGGTGCACCCAGTGCGCATTGAATCCTCGTCACCTTCGCTGGCCAATGGGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCCCGCAGCGTTGGTAGCTGCACAGCGGTACTGTCCTaGATCAGCCAGCTCCACGTGGGCAATCCTGATGAT +
Preference number: 6 (lower is better)
Translates to: ARSVGSCTAVLS*ISQLHVGNPDD
Trigger: ATCATCAGGATTGCCCACGTGGAGCTGGCTGATGCAGGACAGTACCGCTGTGCAGCTACCAACGCTGCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGGTGTGGGGTGGCGGATAGTGGCCATGCCAGAGCCTaGATCAAATCGAAACTCAGGCCTTCCGCCCACGAG +
Preference number: 6 (lower is better)
Translates to: RCGVADSGHARA*IKSKLRPSAHE
Trigger: CTCGTGGGCGGAAGGCCTGAGTTTCGATTTGATGCAGGCTCTGGCATGGCCACTATCCGCCACCCCACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AAGCTGGCTGGGATGCAGCGGTTGGTGGAGACACACTaGAAGTGCGTGGGCCCACATACTTCTCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: KLAGMQRLVETH*KCVGPHTSPGC
Trigger: GCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GAAGCCTGGATGGACTGCTGTGGAGGCGTCACTACCTaGGGAGGCATGCAGCCAAACTCATCACTGCGGTCG +
Preference number: 6 (lower is better)
Translates to: EAWMDCCGGVTT*GGMQPNSSLRS
Trigger: CGACCGCAGTGATGAGTTTGGCTGCATGCCTCCCCAGGTAGTGACGCCTCCACAGCAGTCCATCCAGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CGTCTGGAATGCCGAACACCATGCCACGCGAGTTCATaGCCTCACAGGTGTATGCGCCCTGGTCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: RLECRTPCHASS*PHRCMRPGLPP
Trigger: AGGAGGCAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTGTTCGGCATTCCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCGGCCTCCTTGTACATTGGGGTCACCCTCATAGCCTaGGGCACACTGCTCACAGTACTGCCCAGTGTAGCC +
Preference number: 6 (lower is better)
Translates to: PASLYIGVTLIA*GTLLTVLPSVA
Trigger: GGCTACACTGGGCAGTACTGTGAGCAGTGTGCCCCAGGCTATGAGGGTGACCCCAATGTACAAGGAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CACGGCACAGGTACTGGCCCTGATCCGAGGGTTCAATaGCTGGCAAGCGCAGGATGCCGTTGTGGATCTGAG +
Preference number: 6 (lower is better)
Translates to: HGTGTGPDPRVQ*LASAGCRCGSE
Trigger: CTCAGATCCACAACGGCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATCAGGGCCAGTACCTGTGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TGGGTGGAGGGTTGCCCGTGGCTGAGCAGTGTAAAGTaGCCGTGTGGCCAGCCTCCAAGGTCAGCTCAGATT +
Preference number: 6 (lower is better)
Translates to: WVEGCPWLSSVK*PCGQPPRSAQI
Trigger: AATCTGAGCTGACCTTGGAGGCTGGCCACACGGCCACTTTACACTGCTCAGCCACGGGCAACCCTCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GCCGTGAGCCAGGCACTGCAGCTGAACCAGGTTCCCTaGCTGCGCCGAGGTATGTTCTGGAATTATGGTGGC +
Preference number: 6 (lower is better)
Translates to: AVSQALQLNQVP*LRRGMFWNYGG
Trigger: GCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGTTCAGCTGCAGTGCCTGGCTCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CGAAGGTGGGTGCCACGCTCATTGGGCACAGCACAGTaGAACTCAACGCTGGCCCCTATGTTCCGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: RRWVPRSLGTAQ*NSTLAPMFRVS
Trigger: AGAGACCCGGAACATAGGGGCCAGCGTTGAGTTCCACTGTGCTGTGCCCAATGAGCGTGGCACCCACCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp ACGGTGTGGAACTGGCCTAGGGCCAGAGGTGTGGGGTaGCGGATAGTGGCCATGCCAGAGCCTGCATCAAAT +
Preference number: 6 (lower is better)
Translates to: TVWNWPRARGVG*RIVAMPEPASN
Trigger: ATTTGATGCAGGCTCTGGCATGGCCACTATCCGCCACCCCACACCTCTGGCCCTAGGCCAGTTCCACACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GACACTCGGTGCCAGCGTCCTAAGGTCAGTGGCTCGTaGCTCCGCAGAACAGCCAGACCTGACCCTAACTCA +
Preference number: 6 (lower is better)
Translates to: DTRCQRPKVSGS*LRRTARPDPNS
Trigger: TGAGTTAGGGTCAGGTCTGGCTGTTCTGCGGAGCCACGAGCCACTGACCTTAGGACGCTGGCACCGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GTCAGGGAGATTGCTAGAGGAGCCTTGGACCAGGACTaGAGCAAAGGCCTCCGCGGAGCCCACCCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: VREIARGALDQD*SKGLRGAHPVG
Trigger: TCCAACAGGGTGGGCTCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGGCTCCTCTAGCAATCTCCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CTGTTGGCTAGGTTGGTGGGACTCCGCTTCTGCCCATaGTACAGCAGCATCCCATCCGCAGAGTCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: LLARLVGLRFCP*YSSIPSAESGR
Trigger: CCGGCCAGACTCTGCGGATGGGATGCTGCTGTACAATGGGCAGAAGCGGAGTCCCACCAACCTAGCCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GTGCCCGCGTCACTTGGCTGCACATTGCGAATGGTCAGGATGCCGTaGAAGTCCATAGCACGGGACGGCAGCTTCCCATTGTGCAGACGG +
Preference number: 6 (lower is better)
Translates to: VPASLGCTLRMVRMP*KSIARDGSFPLCRR
Trigger: CCGTCTGCACAATGGGAAGCTGCCGTCCCGTGCTATGGACTTCAACGGCATCCTGACCATTCGCAATGTGCAGCCAAGTGACGCGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp AGCATCGCATGGCTATTCATGAGCCCAAACATCCGCGGCTCCAACTaGACAGGGATGCCGAGTCGGGTCCAACGAGGGGAAGAGCGCGGT +
Preference number: 6 (lower is better)
Translates to: SIAWLFMSPNIRGSN*TGMPSRVQRGEERG
Trigger: ACCGCGCTCTTCCCCTCGTTGGACCCGACTCGGCATCCCTGTCAAGTTGGAGCCGCGGATGTTTGGGCTCATGAATAGCCATGCGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GATGGAAGTGTCAGGGAGATTGCTAGAGGAGCCTTGGACCAGGACTaGAGCAAAGGCCTCCGCGGAGCCCACCCTGTTGGAGACCTGGCA +
Preference number: 6 (lower is better)
Translates to: DGSVREIARGALDQD*SKGLRGAHPVGDLA
Trigger: TGCCAGGTCTCCAACAGGGTGGGCTCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGGCTCCTCTAGCAATCTCCCTGACACTTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGATCCTCCTGGGATGGAAGTGTCAGGGAGATTGCTAGAGGAGCCTaGGACCAGGACTTGAGCAAAGGCCTCCGCGGAGCCCACCCTGTT +
Preference number: 6 (lower is better)
Translates to: GSSWDGSVREIARGA*DQDLSKGLRGAHPV
Trigger: AACAGGGTGGGCTCCGCGGAGGCCTTTGCTCAAGTCCTGGTCCAAGGCTCCTCTAGCAATCTCCCTGACACTTCCATCCCAGGAGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CAGGCTGAGGGCCCAGGAACACTGGGTAACAGAAACTaGGGTCCATGCGTGACTGGCGGTGGAGGTGTTGTG +
Preference number: 6 (lower is better)
Translates to: QAEGPGTLGNRN*GPCVTGGGGVV
Trigger: CACAACACCTCCACCGCCAGTCACGCATGGACCTCAGTTTCTGTTACCCAGTGTTCCTGGGCCCTCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GTCCATCTGGCCGCCGCCAGAACTCCTCTCGGAAGATaGTCTCATAGCTCCTCCTCTCTGGGCCCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: VHLAAARTPLGR*SHSSSSLGPVV
Trigger: CACTACAGGGCCCAGAGAGGAGGAGCTATGAGATCATCTTCCGAGAGGAGTTCTGGCGGCGGCCAGATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCCGCACCAGAAGTTCATCCAGATCTGCCAGGGCCATaGGCAAATGCTCTCGGGTCGCAGGCTGTCCATCTG +
Preference number: 6 (lower is better)
Translates to: PAPEVHPDLPGP*ANALGSQAVHL
Trigger: CAGATGGACAGCCTGCGACCCGAGAGCATTTGCTCATGGCCCTGGCAGATCTGGATGAACTTCTGGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp ATCCAGACTCTGCCCCTCCGACACGTGGGAGGAAGATaGTTCGATTCGGACTGGAGGGATGACCCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: IQTLPLRHVGGR*FDSDWRDDPRC
Trigger: GCACCTGGGGTCATCCCTCCAGTCCGAATCGAATCATCTTCCTCCCACGTGTCGGAGGGGCAGAGTCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCCAGCAGAGTTGGTGGCGTTACAGATGTACTGTCCTaGGTCCTGCTGGGCCACCCGGGGAATGACCAGTGT +
Preference number: 6 (lower is better)
Translates to: PSRVGGVTDVLS*VLLGHPGNDQC
Trigger: ACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp TCACTCGCTCTGGCACCTGCAGATAGGCAAAGGCTTTaGCCTTGCCCTGCCGGTTGGTGGCAGTGCACACGT +
Preference number: 6 (lower is better)
Translates to: SLALAPADRQRL*PCPAGWWQCTR
Trigger: ACGTGTGCACTGCCACCAACCGGCAGGGCAAGGTCAAAGCCTTTGCCTATCTGCAGGTGCCAGAGCGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CTCGCAGCGCTGTTATCCGATGCCACTCGCCGTCATTaGTGGGATCTTCTGAGACAAGACGGGCCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: LAALLSDATRRH*WDLLRQDGPPH
Trigger: GTGGGGAGGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCTGGGATGCAGCGGTTGGTGGAGACACACTGGAAGTaGGTGGGCCCACATACTTCTCCAGGCTGCTTGACA +
Preference number: 6 (lower is better)
Translates to: AGMQRLVETHWK*VGPHTSPGCLT
Trigger: TGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGTCGGATTCCTCGTCACAGTGGAAGCTGGCTGGGATaGAGCGGTTGGTGGAGACACACTGGAAGTGCGTGG +
Preference number: 6 (lower is better)
Translates to: SRIPRHSGSWLG*SGWWRHTGSAW
Trigger: CCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATCCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CACCATGCCACGCGAGTTCATGGCCTCACAGGTGTATaGGCCCTGGTCTGCCTCCTTCACGTCACGGATGAT +
Preference number: 6 (lower is better)
Translates to: HHATRVHGLTGV*ALVCLLHVTDD
Trigger: ATCATCCGTGACGTGAAGGAGGCAGACCAGGGCGCATACACCTGTGAGGCCATGAACTCGCGTGGCATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CAAAGCTCAGTCGGATCTGGTCCCGGAAGCGCAGGCTaGTCTGGCACACGTTGGTCACACCAAAGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: QSSVGSGPGSAG*SGTRWSHQSRS
Trigger: GCTTCTGCTTTGGTGTGACCAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CACATCTGGTTTCTGCACCGGCTCCAGCATGCCTCGTaGCAGTTCATAGCGCACCTTGTAGCGCAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: HIWFLHRLQHAS*QFIAHLVAQEA
Trigger: GGCTTCCTGCGCTACAAGGTGCGCTATGAACTGGCACGAGGCATGCTGGAGCCGGTGCAGAAACCAGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GGCCGTAGACAGGGTCACAGGAGCTGGCATGGCCATTaGAATTACAGCCAGAGCAAGTACCCAGGTAGGGCC +
Preference number: 6 (lower is better)
Translates to: GRRQGHRSWHGH*NYSQSKYPGRA
Trigger: GGCCCTACCTGGGTACTTGCTCTGGCTGTAATTGCAATGGCCATGCCAGCTCCTGTGACCCTGTCTACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCTTGCTCAGGTGGAACGAGCCGTCCGAGCACTCGTTaGACAAGCGCCCCACTACATTGTTCTTACAGCGGC +
Preference number: 6 (lower is better)
Translates to: ACSGGTSRPSTR*TSAPLHCSYSG
Trigger: GCCGCTGTAAGAACAATGTAGTGGGGCGCTTGTGCAACGAGTGCTCGGACGGCTCGTTCCACCTGAGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGAGACCCTGCTCTCAGCCGGTTGCTGCGTGTAAGATaGTTGGATGAGGAGGGCATCAATGCCTGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: RDPALSRLLRVR*LDEEGINACQG
Trigger: GCCCTGGCAGGCATTGATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGGGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CACTCAAACTCCACAGAGTGGCCGACTACCACAGAGTaGACGGAGGTTCGGACGTTGATGAGCACGGAGGGC +
Preference number: 6 (lower is better)
Translates to: HSNSTEWPTTTE*TEVRTLMSTEG
Trigger: GCCCTCCGTGCTCATCAACGTCCGAACCTCCGTGCACTCTGTGGTAGTCGGCCACTCTGTGGAGTTTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGGCTCCGTATTGCCCAGGGGCATCATTGCCTCCACTaGCTTCAGGGTGCCAGTCTGACTCCACTACCCCAT +
Preference number: 6 (lower is better)
Translates to: RLRIAQGHHCLH*LQGASLTPLPH
Trigger: ATGGGGTAGTGGAGTCAGACTGGCACCCTGAAGGCAGTGGAGGCAATGATGCCCCTGGGCAATACGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AATCTGGATATCAGGGTCCAAGAGTGGGCTGCCCTGTaGCCCGGCTGTGTAGGAGAGGGTGTACCGCAGCTT +
Preference number: 6 (lower is better)
Translates to: NLDIRVQEWAAL*PGCVGEGVPQL
Trigger: AAGCTGCGGTACACCCTCTCCTACACAGCCGGGCCACAGGGCAGCCCACTCTTGGACCCTGATATCCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CCA 72 bp CATGAGCAAATGCTCTCGGGTCGCAGGCTGTCCATCTaGCCGCCGCCAGAACTCCTCTCGGAAGATGATCTC +
Preference number: 6 (lower is better)
Translates to: HEQMLSGRRLSI*PPPELLSEDDL
Trigger: GAGATCATCTTCCGAGAGGAGTTCTGGCGGCGGCCAGATGGACAGCCTGCGACCCGAGAGCATTTGCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GCACAGGTACTGGCCCTGATCCGAGGGTTCAATGGCTaGCAAGCGCAGGATGCCGTTGTGGATCTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: AQVLALIRGFNG*QAQDAVVDLSL
Trigger: AAGGCTCAGATCCACAACGGCATCCTGCGCTTGCCAGCCATTGAACCCTCGGATCAGGGCCAGTACCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GTCTCGATGCGGATGGGCGGGACTACACCAGGGATGTaGACATTAGCGGCAGCTGGTGTAATCGAGACCAGG +
Preference number: 6 (lower is better)
Translates to: VSMRMGGTTPGM*TLAAAGVIETR
Trigger: CCTGGTCTCGATTACACCAGCTGCCGCTAATGTCCACATCCCTGGTGTAGTCCCGCCCATCCGCATCGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS CCA 72 bp GGTACTGTGAGCTTGAAGGAAGCCTCATGCTCAGGGTaGGAGCTACCAGCCACTTGGCACACGTACTCGCCG +
Preference number: 6 (lower is better)
Translates to: GTVSLKEASCSG*ELPATWHTYSP
Trigger: CGGCGAGTACGTGTGCCAAGTGGCTGGTAGCTCCCACCCTGAGCATGAGGCTTCCTTCAAGCTCACAGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp ACTGGCATCTTGGCCCTGCTGTACCGTGCTGCTGGGTaGTTCAATGGAGATGACGGGGCTTCTGAGGCGGAA +
Preference number: 6 (lower is better)
Translates to: TGILALLYRAAG*FNGDDGASEAE
Trigger: TTCCGCCTCAGAAGCCCCGTCATCTCCATTGAACCACCCAGCAGCACGGTACAGCAGGGCCAAGATGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GTACACAGCCTACAAAGCCGCTACTCAGCCCAGCCTTaGGGATGGCACCGTAGTCAGGGTAGCCACCCAGAT +
Preference number: 6 (lower is better)
Translates to: VHSLQSRYSAQP*GWHRSQGSHPD
Trigger: ATCTGGGTGGCTACCCTGACTACGGTGCCATCCCCAAGGCTGGGCTGAGTAGCGGCTTTGTAGGCTGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GTGCCAGGTAGGAACCAGCACCAGACATCGATGGGGTaGTCACCGTTACACCTTCTTCACACCTCACCCCGG +
Preference number: 6 (lower is better)
Translates to: VPGRNQHQTSMG*SPLHLLHTSPR
Trigger: CCGGGGTGAGGTGTGAAGAAGGTGTAACGGTGACCACCCCATCGATGTCTGGTGCTGGTTCCTACCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CAGTCTGACTCCACTACCCCATATCCAGCGCCTTGTTaGCAGCGTGGACCAGAGAAGCCAGGCAGACAGAGG +
Preference number: 6 (lower is better)
Translates to: QSDSTTPYPAPC*QRGPEKPGRQR
Trigger: CCTCTGTCTGCCTGGCTTCTCTGGTCCACGCTGCCAACAAGGCGCTGGATATGGGGTAGTGGAGTCAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp ACCAGATCCTCACCGTCTACTTGGATGGAGCCTCTCTaGCCCTCTCGCAGCGCTGTTATCCGATGCCACTCG +
Preference number: 6 (lower is better)
Translates to: TRSSPSTWMEPL*PSRSAVIRCHS
Trigger: CGAGTGGCATCGGATAACAGCGCTGCGAGAGGGCCAGAGAGGCTCCATCCAAGTAGACGGTGAGGATCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GATGATGTCCTTGGTGTTGACCGCCACATTAGGACCTaGGGACCGGCCGGTGACCAGATCCTCACCGTCTAC +
Preference number: 6 (lower is better)
Translates to: DDVLGVDRHIRT*GPAGDQILTVY
Trigger: GTAGACGGTGAGGATCTGGTCACCGGCCGGTCCCCAGGTCCTAATGTGGCGGTCAACACCAAGGACATCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GACCCTGCTCTCAGCCGGTTGCTGCGTGTAAGATGCTaGGATGAGGAGGGCATCAATGCCTGCCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: DPALSRLLRVRC*DEEGINACQGH
Trigger: ATGGCCCTGGCAGGCATTGATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GGCCCGCTCTTGCCCCCACTGAACAGTAAGATCCCATaGGGTTCCAGCGGCTTGAACTCCACATCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: GPLLPPLNSKIP*GSSGLNSTSRR
Trigger: ACGCCTGGATGTGGAGTTCAAGCCGCTGGAACCCAATGGGATCTTACTGTTCAGTGGGGGCAAGAGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGCTCCAGCTTTTCTACCACAGCCTCCGACACCTCTCGGAACTCCTaGGCACTTGCATCCTCCAGCTGGGGGCTGTACTCAATGGACCGA +
Preference number: 6 (lower is better)
Translates to: GSSFSTTASDTSRNS*ALASSSWGLYSMDR
Trigger: TCGGTCCATTGAGTACAGCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGTGTCGGAGGCTGTGGTAGAAAAGCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp ACAGCAGGTGTCGAGGAGCTGAGCTCGGGGACTGGTTCCTCACAGTaGAGTTCATCAGACATGTCCCTGCAGTCAGGCCTCCGGTCACAG +
Preference number: 6 (lower is better)
Translates to: TAGVEELSSGTGSSQ*SSSDMSLQSGLRSQ
Trigger: CTGTGACCGGAGGCCTGACTGCAGGGACATGTCTGATGAACTCAACTGTGAGGAACCAGTCCCCGAGCTCAGCTCCTCGACACCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CAGTCGGATTCCTCGTCACAGTGGAAGCTGGCTGGGATGCAGCGGTaGGTGGAGACACACTGGAAGTGCGTGGGCCCACATACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: QSDSSSQWKLAGMQR*VETHWKCVGPHTSP
Trigger: TGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTCCACCAACCGCTGCATCCCAGCCAGCTTCCACTGTGACGAGGAATCCGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GATACCAGAGACCCTGCTCTCAGCCGGTTGCTGCGTGTAAGATGCTaGGATGAGGAGGGCATCAATGCCTGCCAGGGCCATCAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: DTRDPALSRLLRVRC*DEEGINACQGHQQV
Trigger: CACCTGCTGATGGCCCTGGCAGGCATTGATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGGGTCTCTGGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTCTCCACATGCAGGACAACGGTGGCTTCAGTGTGCCCAGCAGAGTaGGTGGCGTTACAGATGTACTGTCCTGAGTCCTGCTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: LSTCRTTVASVCPAE*VALQMYCPESCWAT
Trigger: GGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGCCTTCCGCCCACGAGGCCAAAGGAGATGAAATCTGGCTGTCTGTaGGCTAGGTTGGTGGGACTCCGCTTCTGCCCATTGTACAGCAGC +
Preference number: 6 (lower is better)
Translates to: GLPPTRPKEMKSGCL*ARLVGLRFCPLYSS
Trigger: GCTGCTGTACAATGGGCAGAAGCGGAGTCCCACCAACCTAGCCAACAGACAGCCAGATTTCATCTCCTTTGGCCTCGTGGGCGGAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp TCCGGGTTTTGCTTGCTCAGGTGGAACGAGCCGTCCGAGCACTCGTaGCACAAGCGCCCCACTACATTGTTCTTACAGCGGCAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: SGFCLLRWNEPSEHS*HKRPTTLFLQRQVS
Trigger: GGAGACTTGCCGCTGTAAGAACAATGTAGTGGGGCGCTTGTGCAACGAGTGCTCGGACGGCTCGTTCCACCTGAGCAAGCAAAACCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CCCTGTCAGTTGGCTGTTGCGTTGAGGGTTCACCAGAGCAAAGCCTaGGAAGTCCCCAGGAGCAAAGTGGGTAGAGATCAGCTGGCGGGA +
Preference number: 6 (lower is better)
Translates to: PCQLAVALRVHQSKA*EVPRSKVGRDQLAG
Trigger: TCCCGCCAGCTGATCTCTACCCACTTTGCTCCTGGGGACTTCCAAGGCTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GTGCACTGGTTCCACGGTGAAGCCCCCTGTCAGTTGGCTGTTGCGTaGAGGGTTCACCAGAGCAAAGCCTTGGAAGTCCCCAGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: VHWFHGEAPCQLAVA*RVHQSKALEVPRSK
Trigger: TTTGCTCCTGGGGACTTCCAAGGCTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CAA 90 bp GAGGGTGTACCGCAGCTTCCCGCCATAGGCTGCCACCTTGTCTCCTaGGTATATTTCTGGCAGCTGCCAGTAGAAGGACTCTTGGCCGAG +
Preference number: 6 (lower is better)
Translates to: EGVPQLPAIGCHLVS*VYFWQLPVEGLLAE
Trigger: CTCGGCCAAGAGTCCTTCTACTGGCAGCTGCCAGAAATATACCAAGGAGACAAGGTGGCAGCCTATGGCGGGAAGCTGCGGTACACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGAGGGGCTGAGGGTCTGCTGGATGGTGACAAGGATAGAAGCTTCTaGGGTGCCCGAGCCACTGACGACTCGGCATACATACTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: GGAEGLLDGDKDRSF*GARATDDSAYILSR
Trigger: TCTGGAGAGTATGTATGCCGAGTCGTCAGTGGCTCGGGCACCCAAGAAGCTTCTATCCTTGTCACCATCCAGCAGACCCTCAGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGGTCTGTCCTTCCGTCACTGTGGGAGATGAGGTCTCAATTCTCATaGGTGGGGAGACACTGGGCACATGGGATGGCCCTCTGCTCTCGA +
Preference number: 6 (lower is better)
Translates to: GSVLPSLWEMRSQFS*VGRHWAHGMALCSR
Trigger: TCGAGAGCAGAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAATGAGAATTGAGACCTCATCTCCCACAGTGACGGAAGGACAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGGGAGACCGAGATCATGATGGAGGTCTCCTGGGCATCAATGTTGTaGTTGGCTCGGCACACATACTCGCCGGAGTCAGCCACCGACATG +
Preference number: 6 (lower is better)
Translates to: GETEIMMEVSWASML*LARHTYSPESATDM
Trigger: CATGTCGGTGGCTGACTCCGGCGAGTATGTGTGCCGAGCCAACAACAACATTGATGCCCAGGAGACCTCCATCATGATCTCGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTAGGGGAGACCGAGATCATGATGGAGGTCTCCTGGGCATCAATGTaGTTGTTGGCTCGGCACACATACTCGCCGGAGTCAGCCACCGAC +
Preference number: 6 (lower is better)
Translates to: LGETEIMMEVSWASM*LLARHTYSPESATD
Trigger: GTCGGTGGCTGACTCCGGCGAGTATGTGTGCCGAGCCAACAACAACATTGATGCCCAGGAGACCTCCATCATGATCTCGGTCTCCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp TCTTCCACAGGCCCGCTCTTGCCCCCACTGAACAGTAAGATCCCATaGGGTTCCAGCGGCTTGAACTCCACATCCAGGCGTAGCTCATGG +
Preference number: 6 (lower is better)
Translates to: SSTGPLLPPLNSKIP*GSSGLNSTSRRSSW
Trigger: CCATGAGCTACGCCTGGATGTGGAGTTCAAGCCGCTGGAACCCAATGGGATCTTACTGTTCAGTGGGGGCAAGAGCGGGCCTGTGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTGAACACTAGATGGCCATCCTGTAGTCCAAGGCTAATGAAGTCCTaGCTGCGGCTGGCCTCTCTCACCACACCCTGCCAGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LNTRWPSCSPRLMKS*LRLASLTTPCQSRR
Trigger: CCTCCTGCTCTGGCAGGGTGTGGTGAGAGAGGCCAGCCGCAGCAAGGACTTCATTAGCCTTGGACTACAGGATGGCCATCTAGTGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CAGGAACACTGGGTAACAGAAACTGAGGTCCATGCGTaGCTGGCGGTGGAGGTGTTGTGGCTGCTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: QEHWVTETEVHA*LAVEVLWLLLA
Trigger: GGCCAGAAGCAGCCACAACACCTCCACCGCCAGTCACGCATGGACCTCAGTTTCTGTTACCCAGTGTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp TGCTCTCAGCCGGTTGCTGCGTGTAAGATGCTTGGATaGGGAGGGCATCAATGCCTGCCAGGGCCATCAGCA +
Preference number: 6 (lower is better)
Translates to: CSQPVAACKMLG*GGHQCLPGPSA
Trigger: TGCTGATGGCCCTGGCAGGCATTGATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CGTGGGAGGAAGATGATTCGATTCGGACTGGAGGGATaGCCCCAGGTGCAGTGCCTGCAGGCTCAATGGTCA +
Preference number: 6 (lower is better)
Translates to: RGRKMIRFGLEG*PQVQCLQAQWS
Trigger: TGACCATTGAGCCTGCAGGCACTGCACCTGGGGTCATCCCTCCAGTCCGAATCGAATCATCTTCCTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GTTCAGGTCCAGAGTATGCCCATTGGCCAGCGAAGGTaGCGAGGATTCAATGCGCACTGGGTGCACCACGCT +
Preference number: 6 (lower is better)
Translates to: VQVQSMPIGQRR*RGFNAHWVHHA
Trigger: AGCGTGGTGCACCCAGTGCGCATTGAATCCTCGTCACCTTCGCTGGCCAATGGGCATACTCTGGACCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp ACTCCACATCCAGGCGTAGCTCATGGTGCATGTTGGTaGGAGCCGGTAGTGCCAGGTAGGAACCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: TPHPGVAHGACW*EPVVPGRNQHQ
Trigger: CTGGTGCTGGTTCCTACCTGGCACTACCGGCTCTCACCAACATGCACCATGAGCTACGCCTGGATGTGGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp ACTGGCCCACACCCTGGCTGCCCAAGAAGCTGTAGGTaGGGTCCAACCGCTTGCCATTCACAGATACCTCAC +
Preference number: 6 (lower is better)
Translates to: TGPHPGCPRSCR*GPTACHSQIPH
Trigger: GTGAGGTATCTGTGAATGGCAAGCGGTTGGACCTCACCTACAGCTTCTTGGGCAGCCAGGGTGTGGGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TCACTACCTGGGGAGGCATGCAGCCAAACTCATCACTaGGGTCGGGACAGTCGGATTCCTCGTCACAGTGGA +
Preference number: 6 (lower is better)
Translates to: SLPGEACSQTHH*GRDSRIPRHSG
Trigger: TCCACTGTGACGAGGAATCCGACTGTCCCGACCGCAGTGATGAGTTTGGCTGCATGCCTCCCCAGGTAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CGAGGATCACATCTGGTTTCTGCACCGGCTCCAGCATaGCTCGTGCCAGTTCATAGCGCACCTTGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: RGSHLVSAPAPA*LVPVHSAPCSA
Trigger: TGCGCTACAAGGTGCGCTATGAACTGGCACGAGGCATGCTGGAGCCGGTGCAGAAACCAGATGTGATCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CTGTGCCTAGGGCGTTCTGGGCTTGGCACACGTAGGTaGCTGCGTCTGATGGTTTCACGGATGCGATCTTCA +
Preference number: 6 (lower is better)
Translates to: LCLGRSGLGTRR*LRLMVSRMRSS
Trigger: TGAAGATCGCATCCGTGAAACCATCAGACGCAGGCACCTACGTGTGCCAAGCCCAGAACGCCCTAGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GAGTTGGTGGCGTTACAGATGTACTGTCCTGAGTCCTaGTGGGCCACCCGGGGAATGACCAGTGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: ELVALQMYCPES*WATRGMTSVLP
Trigger: AGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GGCTGTCTGTTGGCTAGGTTGGTGGGACTCCGCTTCTaGCCATTGTACAGCAGCATCCCATCCGCAGAGTCT +
Preference number: 6 (lower is better)
Translates to: GCLLARLVGLRF*PLYSSIPSAES
Trigger: AGACTCTGCGGATGGGATGCTGCTGTACAATGGGCAGAAGCGGAGTCCCACCAACCTAGCCAACAGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GAGCCTCTCTGGCCCTCTCGCAGCGCTGTTATCCGATaGCACTCGCCGTCATTGATGGGATCTTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: EPLWPSRSAVIR*HSPSLMGSSET
Trigger: TGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTGCGAGAGGGCCAGAGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCCCACAGCAGGTGTCGAGGAGCTGAGCTCGGGGACTaGTTCCTCACAGTTGAGTTCATCAGACATGTCCCT +
Preference number: 6 (lower is better)
Translates to: PHSRCRGAELGD*FLTVEFIRHVP
Trigger: AGGGACATGTCTGATGAACTCAACTGTGAGGAACCAGTCCCCGAGCTCAGCTCCTCGACACCTGCTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TTGAAGTCATTGGGCTGGTCAAAGCTCAGTCGGATCTaGTCCCGGAAGCGCAGGCTGCTCTGGCACACGTTG +
Preference number: 6 (lower is better)
Translates to: LKSLGWSKLSRI*SRKRRLLWHTL
Trigger: CAACGTGTGCCAGAGCAGCCTGCGCTTCCGGGACCAGATCCGACTGAGCTTTGACCAGCCCAATGACTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AAAGTTGCTGAAAGAGAGGCGGGCCCCATCGTGCACTaGTTCCACGGTGAAGCCCCCTGTCAGTTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: KVAEREAGPIVH*FHGEAPCQLAV
Trigger: AACAGCCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCACGATGGGGCCCGCCTCTCTTTCAGCAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CCA 72 bp CCATTCTGGCAGGGTCGGTCCTGGCAAGTAGGGCAGTaGGAGATGCCATGTGTTGTGAGGTTGACGTCATGG +
Preference number: 6 (lower is better)
Translates to: PFWQGRSWQVGQ*EMPCVVRLTSW
Trigger: CCATGACGTCAACCTCACAACACATGGCATCTCCCACTGCCCTACTTGCCAGGACCGACCCTGCCAGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCACACCCTGCCAGAGCAGGAGGCCATCGGCTGTGCTaGTCCGAACCTCGAATTCAATTGTCTCGGGTACTT +
Preference number: 6 (lower is better)
Translates to: PHPARAGGHRLC*SEPRIQLSRVL
Trigger: AAGTACCCGAGACAATTGAATTCGAGGTTCGGACCAGCACAGCCGATGGCCTCCTGCTCTGGCAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ACGCCGGGCTGGGAGGGCATCGTCACATTCACACCCTaGAAGTCATTGGGCTGGTCAAAGCTCAGTCGGATC +
Preference number: 6 (lower is better)
Translates to: TPGWEGIVTFTP*KSLGWSKLSRI
Trigger: GATCCGACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGTGAATGTGACGATGCCCTCCCAGCCCGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TGCTTGCTCAGGTGGAACGAGCCGTCCGAGCACTCGTaGCACAAGCGCCCCACTACATTGTTCTTACAGCGG +
Preference number: 6 (lower is better)
Translates to: CLLRWNEPSEHS*HKRPTTLFLQR
Trigger: CCGCTGTAAGAACAATGTAGTGGGGCGCTTGTGCAACGAGTGCTCGGACGGCTCGTTCCACCTGAGCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TTCCACGGTGAAGCCCCCTGTCAGTTGGCTGTTGCGTaGAGGGTTCACCAGAGCAAAGCCTTGGAAGTCCCC +
Preference number: 6 (lower is better)
Translates to: FHGEAPCQLAVA*RVHQSKALEVP
Trigger: GGGGACTTCCAAGGCTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTGACAGGGGGCTTCACCGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CAA 72 bp ATCGTGCACTGGTTCCACGGTGAAGCCCCCTGTCAGTaGGCTGTTGCGTTGAGGGTTCACCAGAGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: IVHWFHGEAPCQ*AVALRVHQSKA
Trigger: GGCTTTGCTCTGGTGAACCCTCAACGCAACAGCCAACTGACAGGGGGCTTCACCGTGGAACCAGTGCACGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CAA 72 bp GCCGTTGGGGCTGATGTGGACGTTGTCCTCCAGCTCTaGGTCCCGAATCTTCCACTCAACCTTGATGGGCGT +
Preference number: 6 (lower is better)
Translates to: AVGADVDVVLQL*VPNLPLNLDGR
Trigger: ACGCCCATCAAGGTTGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GCATCCTCGGGGCGAACTGATGGTAGCATCAGCATATaGTTTTCCAGGCGACTGTCGGGTGGCAGGTCACCG +
Preference number: 6 (lower is better)
Translates to: ASSGRTDGSISI*FSRRLSGGRSP
Trigger: CGGTGACCTGCCACCCGACAGTCGCCTGGAAAACAATATGCTGATGCTACCATCAGTTCGCCCCGAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TCTCGCAGCGCTGTTATCCGATGCCACTCGCCGTCATaGATGGGATCTTCTGAGACAAGACGGGCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: SRSAVIRCHSPS*MGSSETRRASP
Trigger: TGGGGAGGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATAACAGCGCTGCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp ATAGGGGCCGATGGAGCCACTGGAGACCACTGTATGCAGCACCTCTaGAATCTGAGATCCGTCCGCATTCCCTTCGGAGCCAACATCCAG +
Preference number: 6 (lower is better)
Translates to: IGADGATGDHCMQHL*NLRSVRIPFGANIQ
Trigger: CTGGATGTTGGCTCCGAAGGGAATGCGGACGGATCTCAGATTCAAGAGGTGCTGCATACAGTGGTCTCCAGTGGCTCCATCGGCCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GGCAATCCTCAGGCGTCCCAGCCGTGGCATCTCCATAGTAACCAGTaGCACACAGCTCACAGAACTCACCGGCTGTGTTGTGCTGACATC +
Preference number: 6 (lower is better)
Translates to: GNPQASQPWHLHSNQ*HTAHRTHRLCCADI
Trigger: GATGTCAGCACAACACAGCCGGTGAGTTCTGTGAGCTGTGTGCAACTGGTTACTATGGAGATGCCACGGCTGGGACGCCTGAGGATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GAGACCGAGATCATGATGGAGGTCTCCTGGGCATCAATGTTGTTGTaGGCTCGGCACACATACTCGCCGGAGTCAGCCACCGACATGTGG +
Preference number: 6 (lower is better)
Translates to: ETEIMMEVSWASMLL*ARHTYSPESATDMW
Trigger: CCACATGTCGGTGGCTGACTCCGGCGAGTATGTGTGCCGAGCCAACAACAACATTGATGCCCAGGAGACCTCCATCATGATCTCGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTTCTGAGGCGGAAGGAAGAGTTTTGGCTGGAGGGTACTGTGAGCTaGAAGGAAGCCTCATGCTCAGGGTGGGAGCTACCAGCCACTTGG +
Preference number: 6 (lower is better)
Translates to: LLRRKEEFWLEGTVS*KEASCSGWELPATW
Trigger: CCAAGTGGCTGGTAGCTCCCACCCTGAGCATGAGGCTTCCTTCAAGCTCACAGTACCCTCCAGCCAAAACTCTTCCTTCCGCCTCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp AATGATGGAGCCGTTGGGGCTGATGTGGACGTTGTCCTCCAGCTCTaGGTCCCGAATCTTCCACTCAACCTTGATGGGCGTTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: NDGAVGADVDVVLQL*VPNLPLNLDGRCSL
Trigger: GAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CGGTCCTGGCAAGTAGGGCAGTGGGAGATGCCATGTGTTGTGAGGTaGACGTCATGGAAGACAACCTCCTCGCCTTGGATACGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: RSWQVGQWEMPCVVR*TSWKTTSSPWIRSS
Trigger: TGAGCTGCGTATCCAAGGCGAGGAGGTTGTCTTCCATGACGTCAACCTCACAACACATGGCATCTCCCACTGCCCTACTTGCCAGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CCACCAACCATTGCTAGGGACACAAAGTCTTCCACAGGCCCGCTCTaGCCCCCACTGAACAGTAAGATCCCATTGGGTTCCAGCGGCTTG +
Preference number: 6 (lower is better)
Translates to: PPTIARDTKSSTGPL*PPLNSKIPLGSSGL
Trigger: CAAGCCGCTGGAACCCAATGGGATCTTACTGTTCAGTGGGGGCAAGAGCGGGCCTGTGGAAGACTTTGTGTCCCTAGCAATGGTTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp AGAGGTATGAGTAGGTCCAGCCATACCGGCTCGCTGTaGCAGTCTCTGTGTCCTCAGGGAGGGAAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: RGMSRSSHTGSL*QSLCPQGGKGH
Trigger: ATGGCCTTTCCCTCCCTGAGGACACAGAGACTGTCACAGCGAGCCGGTATGGCTGGACCTACTCATACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GGAAGTGCGTGGGCCCACATACTTCTCCAGGCTGCTTaGCAGAACAATTGGCCTCATCTGTCCGGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GSAWAHILLQAA*QNNWPHLSGPH
Trigger: GTGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GTCCTTCAGTCACGGATGGCGACGAGGATTCTATCCTaGCTGGCACTGAGAGGACGACCACCTGAATGCGTG +
Preference number: 6 (lower is better)
Translates to: VLQSRMATRILS*LALRGRPPECV
Trigger: CACGCATTCAGGTGGTCGTCCTCTCAGTGCCAGTCAGGATAGAATCCTCGTCGCCATCCGTGACTGAAGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030547.15
CDS TCA 72 bp AACTCAACGCTGGCCCCTATGTTCCGGGTCTCTAGCTaGGGAGTGACTTGCACAGTGGGTGTGGATCCTCCT +
Preference number: 6 (lower is better)
Translates to: NSTLAPMFRVSS*GVTCTVGVDPP
Trigger: AGGAGGATCCACACCCACTGTGCAAGTCACTCCTCAGCTAGAGACCCGGAACATAGGGGCCAGCGTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GAAACTCAGGCCTTCCGCCCACGAGGCCAAAGGAGATaGAATCTGGCTGTCTGTTGGCTAGGTTGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: ETQAFRPRGQRR*NLAVCWLGWWD
Trigger: GTCCCACCAACCTAGCCAACAGACAGCCAGATTTCATCTCCTTTGGCCTCGTGGGCGGAAGGCCTGAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp TATCCGATGCCACTCGCCGTCATTGATGGGATCTTCTaGGACAAGACGGGCCTCCCCACTGCCCAGTTGGTA +
Preference number: 6 (lower is better)
Translates to: YPMPLAVIDGIF*DKTGLPTAQLV
Trigger: TACCAACTGGGCAGTGGGGAGGCCCGTCTTGTCTCAGAAGATCCCATCAATGACGGCGAGTGGCATCGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GTCCTTCAGTCACGGATGGCGACGAGGATTCTATCCTaGCTGGCACTGAGTTGGCACCCGAAGCTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: VLQSRMATRILS*LALSWHPKLRG
Trigger: TCCTCTCAGCTTCGGGTGCCAACTCAGTGCCAGTCAGGATAGAATCCTCGTCGCCATCCGTGACTGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171332.2
CDS GCA 72 bp CACTGGAAGTGCGTGGGCCCACATACTTCTCCAGGCTaGTTGACAGAACAATTGGCCTCATCTGTCCGGTCC +
Preference number: 6 (lower is better)
Translates to: HWKCVGPHTSPG*LTEQLASSVRS
Trigger: GGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp AGGCGTCCCAGCCGTGGCATCTCCATAGTAACCAGTTaGACACAGCTCACAGAACTCACCGGCTGTGTTGTG +
Preference number: 6 (lower is better)
Translates to: RRPSRGISIVTS*TQLTELTGCVV
Trigger: CACAACACAGCCGGTGAGTTCTGTGAGCTGTGTGCAACTGGTTACTATGGAGATGCCACGGCTGGGACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TTTCTACCACAGCCTCCGACACCTCTCGGAACTCCTTaGCACTTGCATCCTCCAGCTGGGGGCTGTACTCAA +
Preference number: 6 (lower is better)
Translates to: FLPQPPTPLGTP*HLHPPAGGCTQ
Trigger: TTGAGTACAGCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGTGTCGGAGGCTGTGGTAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGCATCGTCACATTCACACCCTTGAAGTCATTGGGCTaGTCAAAGCTCAGTCGGATCTGGTCCCGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: GIVTFTPLKSLG*SKLSRIWSRKR
Trigger: GCGCTTCCGGGACCAGATCCGACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGTGAATGTGACGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GTTGGAGCCAGTACACACGTAGGTGCCCGCGTCACTTaGCTGCACATTGCGAATGGTCAGGATGCCGTTGAA +
Preference number: 6 (lower is better)
Translates to: VGASTHVGARVT*LHIANGQDAVE
Trigger: TTCAACGGCATCCTGACCATTCGCAATGTGCAGCCAAGTGACGCGGGCACCTACGTGTGTACTGGCTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCGTTGGGGCTGATGTGGACGTTGTCCTCCAGCTCTTaGTCCCGAATCTTCCACTCAACCTTGATGGGCGTT +
Preference number: 6 (lower is better)
Translates to: PLGLMWTLSSSS*SRIFHSTLMGV
Trigger: AACGCCCATCAAGGTTGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCCACGATGGTAATGATGGAGCCGTTGGGGCTGATGTaGACGTTGTCCTCCAGCTCTTGGTCCCGAATCTTC +
Preference number: 6 (lower is better)
Translates to: PTMVMMEPLGLM*TLSSSSWSRIF
Trigger: GAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATTACCATCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TTGGTGGCGTTACAGATGTACTGTCCTGAGTCCTGCTaGGCCACCCGGGGAATGACCAGTGTGTTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LVALQMYCPESC*ATRGMTSVLPS
Trigger: AGAAGGCAACACACTGGTCATTCCCCGGGTGGCCCAGCAGGACTCAGGACAGTACATCTGTAACGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TGGCATATGGAGGACTCTCCACATGCAGGACAACGGTaGCTTCAGTGTGCCCAGCAGAGTTGGTGGCGTTAC +
Preference number: 6 (lower is better)
Translates to: WHMEDSPHAGQR*LQCAQQSWWRY
Trigger: GTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGAGTCCTCCATATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CTGAGGAGTGACTTGCACAGTGGGTGTGGATCCTCCTaGGATGGAAGTGTCAGGGAGATTGCTAGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: LRSDLHSGCGSS*DGSVREIARGA
Trigger: GGCTCCTCTAGCAATCTCCCTGACACTTCCATCCCAGGAGGATCCACACCCACTGTGCAAGTCACTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGCTCCTCGTTCAGGTCTAAACCTTGGAACTTGCCCTaGGAGGTCCCGTTGACAGGGGCCAAATTGCCCACA +
Preference number: 6 (lower is better)
Translates to: SSSFRSKPWNLP*EVPLTGAKLPT
Trigger: TGTGGGCAATTTGGCCCCTGTCAACGGGACCTCCCAGGGCAAGTTCCAAGGTTTAGACCTGAACGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TTTTCTACCACAGCCTCCGACACCTCTCGGAACTCCTaGGCACTTGCATCCTCCAGCTGGGGGCTGTACTCA +
Preference number: 6 (lower is better)
Translates to: FSTTASDTSRNS*ALASSSWGLYS
Trigger: TGAGTACAGCCCCCAGCTGGAGGATGCAAGTGCCAAGGAGTTCCGAGAGGTGTCGGAGGCTGTGGTAGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GATGGAGCCACTGGAGACCACTGTATGCAGCACCTCTaGAATCTGAGATCCGTCCGCATTCCCTTCGGAGCC +
Preference number: 6 (lower is better)
Translates to: DGATGDHCMQHL*NLRSVRIPFGA
Trigger: GGCTCCGAAGGGAATGCGGACGGATCTCAGATTCAAGAGGTGCTGCATACAGTGGTCTCCAGTGGCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TGGGAGGGCATCGTCACATTCACACCCTTGAAGTCATaGGGCTGGTCAAAGCTCAGTCGGATCTGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: WEGIVTFTPLKS*GWSKLSRIWSR
Trigger: CCGGGACCAGATCCGACTGAGCTTTGACCAGCCCAATGACTTCAAGGGTGTGAATGTGACGATGCCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCGCAGCTTCCCGCCATAGGCTGCCACCTTGTCTCCTaGGTATATTTCTGGCAGCTGCCAGTAGAAGGACTC +
Preference number: 6 (lower is better)
Translates to: PQLPAIGCHLVS*VYFWQLPVEGL
Trigger: GAGTCCTTCTACTGGCAGCTGCCAGAAATATACCAAGGAGACAAGGTGGCAGCCTATGGCGGGAAGCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CAGGCGTCCCAGCCGTGGCATCTCCATAGTAACCAGTaGCACACAGCTCACAGAACTCACCGGCTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: QASQPWHLHSNQ*HTAHRTHRLCC
Trigger: ACAACACAGCCGGTGAGTTCTGTGAGCTGTGTGCAACTGGTTACTATGGAGATGCCACGGCTGGGACGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CTTCCGTCACTGTGGGAGATGAGGTCTCAATTCTCATaGGTGGGGAGACACTGGGCACATGGGATGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LPSLWEMRSQFS*VGRHWAHGMAL
Trigger: GAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAATGAGAATTGAGACCTCATCTCCCACAGTGACGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCCACGAGGCCAAAGGAGATGAAATCTGGCTGTCTGTaGGCTAGGTTGGTGGGACTCCGCTTCTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: PTRPKEMKSGCL*ARLVGLRFCPL
Trigger: CAATGGGCAGAAGCGGAGTCCCACCAACCTAGCCAACAGACAGCCAGATTTCATCTCCTTTGGCCTCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp ACAGTGGTGTCCATGACAATGTCACTCAGCCCCACACTGGCCATCTaGGTGTTATACACTGTCTGTAGCAGGACAGCCTCCAGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: TVVSMTMSLSPTLAI*VLYTVCSRTASRLA
Trigger: GGCGAGCCTGGAGGCTGTCCTGCTACAGACAGTGTATAACACCAAGATGGCCAGTGTGGGGCTGAGTGACATTGTCATGGACACCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTTGTCTCCTTGGTATATTTCTGGCAGCTGCCAGTAGAAGGACTCTaGGCCGAGGTGGGCAAAGTTGCTGAAAGAGAGGCGGGCCCCATC +
Preference number: 6 (lower is better)
Translates to: LVSLVYFWQLPVEGL*AEVGKVAEREAGPI
Trigger: GATGGGGCCCGCCTCTCTTTCAGCAACTTTGCCCACCTCGGCCAAGAGTCCTTCTACTGGCAGCTGCCAGAAATATACCAAGGAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
ENSMUST00000238544.2
CDS CAA 90 bp GATGGGCGTTGCTCCCTCGTGAATAAGGCACTTGAAACTGGCATCTaGGCCCTGCTGTACCGTGCTGCTGGGTGGTTCAATGGAGATGAC +
Preference number: 6 (lower is better)
Translates to: DGRCSLVNKALETGI*ALLYRAAGWFNGDD
Trigger: GTCATCTCCATTGAACCACCCAGCAGCACGGTACAGCAGGGCCAAGATGCCAGTTTCAAGTGCCTTATTCACGAGGGAGCAACGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GTGCCCACGATGGTAATGATGGAGCCGTTGGGGCTGATGTGGACGTaGTCCTCCAGCTCTTGGTCCCGAATCTTCCACTCAACCTTGATG +
Preference number: 6 (lower is better)
Translates to: VPTMVMMEPLGLMWT*SSSSWSRIFHSTLM
Trigger: CATCAAGGTTGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATTACCATCGTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TGTAGCGCAGGAAGCCTCCATAGGAGTCCACCTTGTTaGCCAGAAACTGCTTGGGTAGGGCCCAGAAAGCAT +
Preference number: 6 (lower is better)
Translates to: CSAGSLHRSPPC*PETAWVGPRKH
Trigger: ATGCTTTCTGGGCCCTACCCAAGCAGTTTCTGGGCAACAAGGTGGACTCCTATGGAGGCTTCCTGCGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp CTACATTGTTCTTACAGCGGCAAGTCTCCCCTGAGGTaGCCAGGCTCCCTCGCTCATCACAGCGCACAATTT +
Preference number: 6 (lower is better)
Translates to: LHCSYSGKSPLR*PGSLAHHSAQF
Trigger: AAATTGTGCGCTGTGATGAGCGAGGGAGCCTGGGCACCTCAGGGGAGACTTGCCGCTGTAAGAACAATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GGACTCTCCACATGCAGGACAACGGTGGCTTCAGTGTaGCCAGCAGAGTTGGTGGCGTTACAGATGTACTGT +
Preference number: 6 (lower is better)
Translates to: GLSTCRTTVASV*PAELVALQMYC
Trigger: ACAGTACATCTGTAACGCCACCAACTCTGCTGGGCACACTGAAGCCACCGTTGTCCTGCATGTGGAGAGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGGCTGCCTCCTCTCTTGTGCCATGTGACTTGGGCATaGGCCTGTCCTTGCACCACACAATTTAGATCCAGG +
Preference number: 6 (lower is better)
Translates to: RLPPLLCHVTWA*ACPCTTQFRSR
Trigger: CCTGGATCTAAATTGTGTGGTGCAAGGACAGGCCCATGCCCAAGTCACATGGCACAAGAGAGGAGGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGGGTCTGCTGGATGGTGACAAGGATAGAAGCTTCTTaGGTGCCCGAGCCACTGACGACTCGGCATACATAC +
Preference number: 6 (lower is better)
Translates to: RVCWMVTRIEAS*VPEPLTTRHTY
Trigger: GTATGTATGCCGAGTCGTCAGTGGCTCGGGCACCCAAGAAGCTTCTATCCTTGTCACCATCCAGCAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp TCCCTGGCTGCGCCGAGGTATGTTCTGGAATTATGGTaGCATATGGAGGACTCTCCACATGCAGGACAACGG +
Preference number: 6 (lower is better)
Translates to: SLAAPRYVLELW*HMEDSPHAGQR
Trigger: CCGTTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GTGAGGTTGACGTCATGGAAGACAACCTCCTCGCCTTaGATACGCAGCTCACGTACACAGCCTACAAAGCCG +
Preference number: 6 (lower is better)
Translates to: VRLTSWKTTSSP*IRSSRTQPTKP
Trigger: CGGCTTTGTAGGCTGTGTACGTGAGCTGCGTATCCAAGGCGAGGAGGTTGTCTTCCATGACGTCAACCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CGGCAGGTGCCACCATTCAGACATGGTTCATGCAGCTaGCACGGGTTCTCCTCATGTTCACAAAGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: RQVPPFRHGSCS*HGFSSCSQRSP
Trigger: AGGAGACCTTTGTGAACATGAGGAGAACCCGTGCCAGCTGCATGAACCATGTCTGAATGGTGGCACCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TGGAAGTGCGTGGGCCCACATACTTCTCCAGGCTGCTaGACAGAACAATTGGCCTCATCTGTCCGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: WKCVGPHTSPGC*TEQLASSVRSS
Trigger: TGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ATCCATGCTGATACCAGAGACCCTGCTCTCAGCCGGTaGCTGCGTGTAAGATGCTTGGATGAGGAGGGCATC +
Preference number: 6 (lower is better)
Translates to: IHADTRDPALSR*LRVRCLDEEGI
Trigger: GATGCCCTCCTCATCCAAGCATCTTACACGCAGCAACCGGCTGAGAGCAGGGTCTCTGGTATCAGCATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TCACTTGGCTGCACATTGCGAATGGTCAGGATGCCGTaGAAGTCCATAGCACGGGACGGCAGCTTCCCATTG +
Preference number: 6 (lower is better)
Translates to: SLGCTLRMVRMP*KSIARDGSFPL
Trigger: CAATGGGAAGCTGCCGTCCCGTGCTATGGACTTCAACGGCATCCTGACCATTCGCAATGTGCAGCCAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ATCATGATGGAGGTCTCCTGGGCATCAATGTTGTTGTaGGCTCGGCACACATACTCGCCGGAGTCAGCCACC +
Preference number: 6 (lower is better)
Translates to: IMMEVSWASMLL*ARHTYSPESAT
Trigger: GGTGGCTGACTCCGGCGAGTATGTGTGCCGAGCCAACAACAACATTGATGCCCAGGAGACCTCCATCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GAGATCATGATGGAGGTCTCCTGGGCATCAATGTTGTaGTTGGCTCGGCACACATACTCGCCGGAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: EIMMEVSWASML*LARHTYSPESA
Trigger: GGCTGACTCCGGCGAGTATGTGTGCCGAGCCAACAACAACATTGATGCCCAGGAGACCTCCATCATGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CGGAAGGAAGAGTTTTGGCTGGAGGGTACTGTGAGCTaGAAGGAAGCCTCATGCTCAGGGTGGGAGCTACCA +
Preference number: 6 (lower is better)
Translates to: RKEEFWLEGTVS*KEASCSGWELP
Trigger: TGGTAGCTCCCACCCTGAGCATGAGGCTTCCTTCAAGCTCACAGTACCCTCCAGCCAAAACTCTTCCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GGCCATCGGCTGTGCTGGTCCGAACCTCGAATTCAATaGTCTCGGGTACTTCAGGCAGGCTCCTTGAGAAAC +
Preference number: 6 (lower is better)
Translates to: GHRLCWSEPRIQ*SRVLQAGSLRN
Trigger: GTTTCTCAAGGAGCCTGCCTGAAGTACCCGAGACAATTGAATTCGAGGTTCGGACCAGCACAGCCGATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GCCATGTGTTGTGAGGTTGACGTCATGGAAGACAACCTCCTCGCCTaGGATACGCAGCTCACGTACACAGCCTACAAAGCCGCTACTCAG +
Preference number: 6 (lower is better)
Translates to: AMCCEVDVMEDNLLA*DTQLTYTAYKAATQ
Trigger: CTGAGTAGCGGCTTTGTAGGCTGTGTACGTGAGCTGCGTATCCAAGGCGAGGAGGTTGTCTTCCATGACGTCAACCTCACAACACATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp CTCTTGCCCCCACTGAACAGTAAGATCCCATTGGGTTCCAGCGGCTaGAACTCCACATCCAGGCGTAGCTCATGGTGCATGTTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: LLPPLNSKIPLGSSG*NSTSRRSSWCMLVR
Trigger: TCTCACCAACATGCACCATGAGCTACGCCTGGATGTGGAGTTCAAGCCGCTGGAACCCAATGGGATCTTACTGTTCAGTGGGGGCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp AGAGCAGGAGGCCATCGGCTGTGCTGGTCCGAACCTCGAATTCAATaGTCTCGGGTACTTCAGGCAGGCTCCTTGAGAAACTGTTACCAG +
Preference number: 6 (lower is better)
Translates to: RAGGHRLCWSEPRIQ*SRVLQAGSLRNCYQ
Trigger: CTGGTAACAGTTTCTCAAGGAGCCTGCCTGAAGTACCCGAGACAATTGAATTCGAGGTTCGGACCAGCACAGCCGATGGCCTCCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp ATCATCTGCCAGCAGGTCCTCATCATCAGAGAGGTATaGGTAGGTCCAGCCATACCGGCTCGCTGTGACAGT +
Preference number: 6 (lower is better)
Translates to: IICQQVLIIREV*VGPAIPARCDS
Trigger: ACTGTCACAGCGAGCCGGTATGGCTGGACCTACTCATACCTCTCTGATGATGAGGACCTGCTGGCAGATGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GGTCTAAACCTTGGAACTTGCCCTGGGAGGTCCCGTTaGCAGGGGCCAAATTGCCCACAATCAGAGATCCTT +
Preference number: 6 (lower is better)
Translates to: GLNLGTCPGRSR*QGPNCPQSEIL
Trigger: AAGGATCTCTGATTGTGGGCAATTTGGCCCCTGTCAACGGGACCTCCCAGGGCAAGTTCCAAGGTTTAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCATTCACAGATACCTCACCCACACAGCCATGGAAGTaGGCACTCATATTGGTGGCTGGGGACAGCTGTACC +
Preference number: 6 (lower is better)
Translates to: PFTDTSPTQPWK*ALILVAGDSCT
Trigger: GGTACAGCTGTCCCCAGCCACCAATATGAGTGCTCACTTCCATGGCTGTGTGGGTGAGGTATCTGTGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp GCTTCCAGGCAGCAGAGAGAAGCCCTCGTAGGAAAGTaGGAACTGAGAGTCTGCTGGGGAAGACAGAGAAGT +
Preference number: 6 (lower is better)
Translates to: ASRQQREALVGK*ELRVCWGRQRS
Trigger: ACTTCTCTGTCTTCCCCAGCAGACTCTCAGTTCTCACTTTCCTACGAGGGCTTCTCTCTGCTGCCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238544.2
CDS GCA 72 bp AAGTCACCGTCACAGCGCCACAACTTGAGAGCACAGTaGCCATTTTCACAGGCGAACTCGTTAGGCTCACAG +
Preference number: 6 (lower is better)
Translates to: KSPSQRHNLRAQ*PFSQANSLGSQ
Trigger: CTGTGAGCCTAACGAGTTCGCCTGTGAAAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTGACGGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp GCTTGCCCTGGTACCACGCACTTCAGATCTACAGTCTaGCCTTCAGTCAAATGGGAGGAGGAGGACTCTATG +
Preference number: 6 (lower is better)
Translates to: ACPGTTHFRSTV*PSVKWEEEDSM
Trigger: CATAGAGTCCTCCTCCTCCCATTTGACTGAAGGGCAGACTGTAGATCTGAAGTGCGTGGTACCAGGGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CCATCCAGTTCCTTGATGAACACCACACTGACAATCTaGTCTCCGGGGATCTTCCTGTATTCGGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PSSSLMNTTLTI*SPGIFLYSGSS
Trigger: GCTGGAGCCCGAATACAGGAAGATCCCCGGAGACCAGATTGTCAGTGTGGTGTTCATCAAGGAACTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AATTCTCATTGGTGGGGAGACACTGGGCACATGGGATaGCCCTCTGCTCTCGATGGTAACGATGAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: NSHWWGDTGHMG*PSALDGNDERG
Trigger: ACCTCTCTCATCGTTACCATCGAGAGCAGAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAATGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GTCTCAATTCTCATTGGTGGGGAGACACTGGGCACATaGGATGGCCCTCTGCTCTCGATGGTAACGATGAGA +
Preference number: 6 (lower is better)
Translates to: VSILIGGETLGT*DGPLLSMVTMR
Trigger: TCTCATCGTTACCATCGAGAGCAGAGGGCCATCCCATGTGCCCAGTGTCTCCCCACCAATGAGAATTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp GGTTCCCTGGCTGCGCCGAGGTATGTTCTGGAATTATaGTGGCATATGGAGGACTCTCCACATGCAGGACAA +
Preference number: 6 (lower is better)
Translates to: GSLAAPRYVLEL*WHMEDSPHAGQ
Trigger: TTGTCCTGCATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CTGAACCAGGTTCCCTGGCTGCGCCGAGGTATGTTCTaGAATTATGGTGGCATATGGAGGACTCTCCACATG +
Preference number: 6 (lower is better)
Translates to: LNQVPWLRRGMF*NYGGIWRTLHM
Trigger: CATGTGGAGAGTCCTCCATATGCCACCATAATTCCAGAACATACCTCGGCGCAGCCAGGGAACCTGGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TTGGCTGTTGCGTTGAGGGTTCACCAGAGCAAAGCCTaGGAAGTCCCCAGGAGCAAAGTGGGTAGAGATCAG +
Preference number: 6 (lower is better)
Translates to: LAVALRVHQSKA*EVPRSKVGRDQ
Trigger: CTGATCTCTACCCACTTTGCTCCTGGGGACTTCCAAGGCTTTGCTCTGGTGAACCCTCAACGCAACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ACCGAGATCATGATGGAGGTCTCCTGGGCATCAATGTaGTTGTTGGCTCGGCACACATACTCGCCGGAGTCA +
Preference number: 6 (lower is better)
Translates to: TEIMMEVSWASM*LLARHTYSPES
Trigger: TGACTCCGGCGAGTATGTGTGCCGAGCCAACAACAACATTGATGCCCAGGAGACCTCCATCATGATCTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ATGGTAATGATGGAGCCGTTGGGGCTGATGTGGACGTaGTCCTCCAGCTCTTGGTCCCGAATCTTCCACTCA +
Preference number: 6 (lower is better)
Translates to: MVMMEPLGLMWT*SSSSWSRIFHS
Trigger: TGAGTGGAAGATTCGGGACCAAGAGCTGGAGGACAACGTCCACATCAGCCCCAACGGCTCCATCATTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCAAAGGAGATGAAATCTGGCTGTCTGTTGGCTAGGTaGGTGGGACTCCGCTTCTGCCCATTGTACAGCAGC +
Preference number: 6 (lower is better)
Translates to: PKEMKSGCLLAR*VGLRFCPLYSS
Trigger: GCTGCTGTACAATGGGCAGAAGCGGAGTCCCACCAACCTAGCCAACAGACAGCCAGATTTCATCTCCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TGTGAGGTTGACGTCATGGAAGACAACCTCCTCGCCTaGGATACGCAGCTCACGTACACAGCCTACAAAGCC +
Preference number: 6 (lower is better)
Translates to: CEVDVMEDNLLA*DTQLTYTAYKA
Trigger: GGCTTTGTAGGCTGTGTACGTGAGCTGCGTATCCAAGGCGAGGAGGTTGTCTTCCATGACGTCAACCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CCACTGAACAGTAAGATCCCATTGGGTTCCAGCGGCTaGAACTCCACATCCAGGCGTAGCTCATGGTGCATG +
Preference number: 6 (lower is better)
Translates to: PLNSKIPLGSSG*NSTSRRSSWCM
Trigger: CATGCACCATGAGCTACGCCTGGATGTGGAGTTCAAGCCGCTGGAACCCAATGGGATCTTACTGTTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp ATTGCTAGGGACACAAAGTCTTCCACAGGCCCGCTCTaGCCCCCACTGAACAGTAAGATCCCATTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: IARDTKSSTGPL*PPLNSKIPLGS
Trigger: GGAACCCAATGGGATCTTACTGTTCAGTGGGGGCAAGAGCGGGCCTGTGGAAGACTTTGTGTCCCTAGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp AGATTCTTGATACAGCCTGTGATCCCAGAAGAGAACTaGCCCCTGGTCAGTGTGGCCACATCTGGGGCACCA +
Preference number: 6 (lower is better)
Translates to: RFLIQPVIPEEN*PLVSVATSGAP
Trigger: TGGTGCCCCAGATGTGGCCACACTGACCAGGGGCAAGTTCTCTTCTGGGATCACAGGCTGTATCAAGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp TCTGTCCGGTCCTCACAATCAAAGTCACCGTCACAGCGCCACAACTaGAGAGCACAGTGCCCATTTTCACAGGCGAACTCGTTAGGCTCA +
Preference number: 6 (lower is better)
Translates to: SVRSSQSKSPSQRHN*RAQCPFSQANSLGS
Trigger: TGAGCCTAACGAGTTCGCCTGTGAAAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTGACGGTGACTTTGATTGTGAGGACCGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp AAGTGCGTGGGCCCACATACTTCTCCAGGCTGCTTGACAGAACAATaGGCCTCATCTGTCCGGTCCTCACAATCAAAGTCACCGTCACAG +
Preference number: 6 (lower is better)
Translates to: KCVGPHTSPGCLTEQ*ASSVRSSQSKSPSQ
Trigger: CTGTGACGGTGACTTTGATTGTGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 90 bp GAGACACACTGGAAGTGCGTGGGCCCACATACTTCTCCAGGCTGCTaGACAGAACAATTGGCCTCATCTGTCCGGTCCTCACAATCAAAG +
Preference number: 6 (lower is better)
Translates to: ETHWKCVGPHTSPGC*TEQLASSVRSSQSK
Trigger: CTTTGATTGTGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCCCACGCACTTCCAGTGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp CCTCACAATCAAAGTCACCGTCACAGCGCCACAACTTaGGAGCACAGTGCCCATTTTCACAGGCGAACTCGT +
Preference number: 6 (lower is better)
Translates to: PHNQSHRHSATT*EHSAHFHRRTR
Trigger: ACGAGTTCGCCTGTGAAAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTGACGGTGACTTTGATTGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp ATCTTCCACTCAACCTTGATGGGCGTTGCTCCCTCGTaGATAAGGCACTTGAAACTGGCATCTTGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: IFHSTLMGVAPS*IRHLKLASWPC
Trigger: GCAGGGCCAAGATGCCAGTTTCAAGTGCCTTATTCACGAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp TTGACAGGGGCCAAATTGCCCACAATCAGAGATCCTTaGGTGAGGCTTCGTAACAGGGTCACGGTGTGGAAC +
Preference number: 6 (lower is better)
Translates to: LTGAKLPTIRDP*VRLRNRVTVWN
Trigger: GTTCCACACCGTGACCCTGTTACGAAGCCTCACTCAAGGATCTCTGATTGTGGGCAATTTGGCCCCTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp AGAAGAGAACTTGCCCCTGGTCAGTGTGGCCACATCTaGGGCACCACCAATGTAGATGATGTCCTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: RRELAPGQCGHI*GTTNVDDVLGV
Trigger: AACACCAAGGACATCATCTACATTGGTGGTGCCCCAGATGTGGCCACACTGACCAGGGGCAAGTTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TCCTCACAATCAAAGTCACCGTCACAGCGCCACAACTaGAGAGCACAGTGCCCATTTTCACAGGCGAACTCG +
Preference number: 6 (lower is better)
Translates to: SSQSKSPSQRHN*RAQCPFSQANS
Trigger: CGAGTTCGCCTGTGAAAATGGGCACTGTGCTCTCAAGTTGTGGCGCTGTGACGGTGACTTTGATTGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TCCATGACAATGTCACTCAGCCCCACACTGGCCATCTaGGTGTTATACACTGTCTGTAGCAGGACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SMTMSLSPTLAI*VLYTVCSRTAS
Trigger: GGAGGCTGTCCTGCTACAGACAGTGTATAACACCAAGATGGCCAGTGTGGGGCTGAGTGACATTGTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS TCA 72 bp ATGTCCCTTGGCAGCTCTGGTCTAAGTTCTGGATTCTaGGGACTCCATCTTGTACACTGTGTCCAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: MSLGSSGLSSGF*GLHLVHCVQEA
Trigger: TGCCTCCTGGACACAGTGTACAAGATGGAGTCCTCAGAATCCAGAACTTAGACCAGAGCTGCCAAGGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS GCA 72 bp TTGGTCCCGAATCTTCCACTCAACCTTGATGGGCGTTaGTCCCTCGTGAATAAGGCACTTGAAACTGGCATC +
Preference number: 6 (lower is better)
Translates to: LVPNLPLNLDGR*SLVNKALETGI
Trigger: GATGCCAGTTTCAAGTGCCTTATTCACGAGGGAGCAACGCCCATCAAGGTTGAGTGGAAGATTCGGGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp GGCCCACATACTTCTCCAGGCTGCTTGACAGAACAATaGGCCTCATCTGTCCGGTCCTCACAATCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: GPHTSPGCLTEQ*ASSVRSSQSKS
Trigger: TGACTTTGATTGTGAGGACCGGACAGATGAGGCCAATTGTTCTGTCAAGCAGCCTGGAGAAGTATGTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp TGTAGTGCTGGCTGGGAAGCCACCAACATGATGTTATaGCCCGTAATCTGGATATCAGGGTCCAAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: CSAGWEATNMML*PVIWISGSKSG
Trigger: CCCACTCTTGGACCCTGATATCCAGATTACGGGCAATAACATCATGTTGGTGGCTTCCCAGCCAGCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CTCCTCATGTTCACAAAGGTCTCCTTTGAAGCCATCTaGACAGAGGCACTGGAACTCATATTCGCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: LLMFTKVSFEAI*TEALELIFARR
Trigger: CCTGCGGGCGAATATGAGTTCCAGTGCCTCTGTCAAGATGGCTTCAAAGGAGACCTTTGTGAACATGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CAA 72 bp CGAATTCAATTGTCTCGGGTACTTCAGGCAGGCTCCTaGAGAAACTGTTACCAGGGAGGCCTAGGAAGCCAT +
Preference number: 6 (lower is better)
Translates to: RIQLSRVLQAGS*RNCYQGGLGSH
Trigger: ATGGCTTCCTAGGCCTCCCTGGTAACAGTTTCTCAAGGAGCCTGCCTGAAGTACCCGAGACAATTGAATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2
CDS CCA 72 bp CAGACATATGTCCCTTGGCAGCTCTGGTCTAAGTTCTaGATTCTGAGGACTCCATCTTGTACACTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: QTYVPWQLWSKF*ILRTPSCTLCP
Trigger: TGGACACAGTGTACAAGATGGAGTCCTCAGAATCCAGAACTTAGACCAGAGCTGCCAAGGGACATATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030547.15
ENSMUST00000171332.2