Pregenerated sensors for HSPE1-RS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000117621Ensembl transcript IDs: ENSMUST00000234633.2
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGAAACTAAAGGTCAGAGACAATGGCTGTCAGTTTAGGCATCATCCGTTTATTCAGACATCAGTGGAATaGCAGCTTCACGTGACACCA | + |
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Preference number: 2 (lower is better) Translates to: VKLKVRDNGCQFRHHPFIQTSVE*QLHVTP Trigger: TGGTGTCACGTGAAGCTGCCATTCCACTGATGTCTG...AATAAACGGATGATGCCTAAACTGACAGCCATTGTCTCTGACCTTTAGTTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234633.2 |
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| CDS-3UTR TCA 90 bp | GTGAAACTAAAGGTCAGAGACAATGGCTGTCAGTTTAGGCATCATCCGTTTATTCTTTCCTTTCCCTCCTaGCCCCACAGCCACGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: VKLKVRDNGCQFRHHPFILSFPS*PHSHDR Trigger: ACGGTCGTGGCTGTGGGGTCAGGAGGGAAAGGAAAG...AATAAACGGATGATGCCTAAACTGACAGCCATTGTCTCTGACCTTTAGTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234633.2 |
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