Pregenerated sensors for HSPBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063802Ensembl transcript IDs: ENSMUST00000079970.6, ENSMUST00000205474.2, ENSMUST00000205952.2, ENSMUST00000206306.2, ENSMUST00000206946.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCGCTGCTGCAGCAGCTaGCAGCGGTGGCGGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGRCCSS*QRWRSS Trigger: ACTGCTCCGCCACCGCTGCCAGCTGCTGCAGCAGCG...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCAGCTTCGCCAGCCATTaGGGGTGTGGCCTGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQASFASH*GCGLGQ Trigger: CTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCT...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCAGCAGCTGGCAGCGGTaGCGGAGCAGTTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGSSWQR*RSSSSR Trigger: CCTGGAGGAACTGCTCCGCCACCGCTGCCAGCTGCT...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR TCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCTGGCGAAGAGAGCCTTaGCTCGTACCGTGTCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQAWRREP*LVPCRR Trigger: CCTGCGACACGGTACGAGTCAAGGCTCTCTTCGCCA...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCGCCGACATGGCTTCCTaGAGCCATTGGCGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQAADMAS*SHWRLS Trigger: GGAGAGACGCCAATGGCTGCAGGAAGCCATGTCGGC...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCGCAGCCGAAGTAGCTTaGGCAGGGCACCCAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGAAEVA*AGHPSP Trigger: TGGGCTTGGGTGCCCTGCGCAAGCTACTTCGGCTGC...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCTCCAGGCGGAGGAACTaGAGCAACCCAGCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGSRRRN*SNPASC Trigger: GCAGGAGGCTGGGTTGCTGCAGTTCCTCCGCCTGGA...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGGGAAGGCGGCCGACATaGCTTCCTGCAGCCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRGRRPT*LPAAIG Trigger: GCCAATGGCTGCAGGAAGCCATGTCGGCCGCCTTCC...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCGACCCACCAGCAGATaGATGCCTGACAGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRRPTSR*MPDSWQ Trigger: CTGCCAGCTGTCAGGCATGCATCTGCTGGTGGGTCG...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCACAAGGGCCACCAGCTaGTGGACCATCCCCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGTRATS*WTIPME Trigger: CTCCATGGGGATGGTCCAGCAGCTGGTGGCCCTTGT...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCGCTTCCTGCAGCCATTaGCGTCTCTCCTCGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQAASCSH*RLSSLM Trigger: CATGAGCGAGGAGAGACGCCAATGGCTGCAGGAAGC...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGTCCACCTCCTCTCGCTaGCCCCGGAAGGCGGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRSTSSR*PRKAAD Trigger: GTCGGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGGA...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCAGGCAGTTCTTCATCTaGTCCACCTCCTCTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQARQFFI*STSSRW Trigger: CCAGCGAGAGGAGGTGGAGCAGATGAAGAACTGCCT...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | GGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGCCTCCAGCGCAGCCCTaGAGCCCCTGCCTCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: GPNKAWQSLKRECLGRREPPAQP*SPCLQV Trigger: TACCTGGAGGCAGGGGCTGCAGGGCTGCGCTGGAGG...CTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGGCACTTGCTGCTGCATaGCCCGCATCAGCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRALAAA*PASALR Trigger: TCTCAGTGCTGATGCGGGCCATGCAGCAGCAAGTGC...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR TCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCAGCAGATGCATGCCTaGCAGCTGGCAGAAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRQQMHA*QLAEIC Trigger: GCAGATTTCTGCCAGCTGTCAGGCATGCATCTGCTG...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCGCAGTAATAGCCATCTaGAGCAGGCCTTGGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQAAVIAI*SRPWRF Trigger: GAACCTCCAAGGCCTGCTGCAGATGGCTATTACTGC...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | GGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGCAGCCCTGCAGCCCCTaGCTCCAGGTATCGACCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPNKAWQSLKRECLGRREQPCSP*LQVSTH Trigger: GTGGGTCGATACCTGGAGGCAGGGGCTGCAGGGCTG...CTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | GCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGGATTGCGGGTGTGGCCTaGGACAGGACCCGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AQTRPGNPLRESAWEGGRIAGVA*DRTRRQ Trigger: CTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAAT...CCTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCTGCAGCAGGAATGCTaGCTTGACCTTGAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGLQQEC*LDLELL Trigger: CAGAAGCTCAAGGTCAAGTCAGCATTCCTGCTGCAG...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCACCAGCAGATGCATaGCTGACAGCTGGCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRPPADA*LTAGRN Trigger: ATTTCTGCCAGCTGTCAGGCATGCATCTGCTGGTGG...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCTGCTCCTGGATGGCTaGAACGTTCTGACTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRLLLDG*NVLTAC Trigger: ACATGCAGTCAGAACGTTGCAGCCATCCAGGAGCAG...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCCACCAGCAAGTTCTaGAGCAGGAATGCTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRPTSKF*SRNADL Trigger: CAAGTCAGCATTCCTGCTGCAGAACTTGCTGGTGGG...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGTACTCCTCACGCTGCTaGAGCAGCTGGCAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRYSSRC*SSWQRW Trigger: CCACCGCTGCCAGCTGCTGCAGCAGCGTGAGGAGTA...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCATTCACGAACACCCTaGGGGAAATCTGTCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGHSRTP*GKSVTR Trigger: CCTTGTGACAGATTTCCCTCAGGGTGTTCGTGAATG...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGCAAGAGGGAGGCGACTaGCCCCTGAGCCTTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRQEGGD*PLSLCL Trigger: CAGACAAAGGCTCAGGGGGCAGTCGCCTCCCTCTTG...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | GCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGGCCCAAGCCCAACACCTaGTCCTGGATGGCTGCAACG | + |
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Preference number: 4 (lower is better) Translates to: AQTRPGNPLRESAWEGGRPKPNT*SWMAAT Trigger: CGTTGCAGCCATCCAGGAGCAGGTGTTGGGCTTGGG...CCTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCTGCATGCCTGACAGCTaGCAGAAATCTGCTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: FLSNPSRGLPRDGLAGPGCMPDS*QKSAAL Trigger: CAATGCAGCAGATTTCTGCCAGCTGTCAGGCATGCA...GCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | GGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGAGGGCCACCAGCTGCTaGACCATCCCCATGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: GPNKAWQSLKRECLGRRERATSC*TIPMEQ Trigger: TTGCTCCATGGGGATGGTCCAGCAGCTGGTGGCCCT...CTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCCCAAGCACATGCTCATaGAAAGGACTGTGTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FSATPPGGYPEMGWQAQAPSTCS*KGLCSV Trigger: GACAGAACACAGTCCTTTCCATGAGCATGTGCTTGG...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCTGGCAGAAATCTGCTaGATTGTCCATGTTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: LSQQPLQGATQRWAGRPRLAEIC*IVHVLA Trigger: TGCGAGAACATGGACAATGCAGCAGATTTCTGCCAG...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGCAAAGGGTTCCTTTGTaGTCAGGGTGGCCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRQRVPL*SGWPTS Trigger: GCTGGTGGGCCACCCTGAGCACAAAGGAACCCTTTG...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | GCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGGCCTTTGTGCTCAGGGTaGCCCACCAGCAAGTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQTRPGNPLRESAWEGGRPLCSG*PTSKFC Trigger: GCAGAACTTGCTGGTGGGCCACCCTGAGCACAAAGG...CCTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGAACTCCAGCTCCTCCTaGTACTCCTCACGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRNSSSS*YSSRCC Trigger: GCAGCAGCGTGAGGAGTACCAGGAGGAGCTGGAGTT...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGTTGAGCTTCTGCACTTaGTGCTGCATGGCCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRLSFCT*CCMARI Trigger: GATGCGGGCCATGCAGCAGCAAGTGCAGAAGCTCAA...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | GCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGGACACCTGCTCCTGGATaGCTGCAACGTTCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: AQTRPGNPLRESAWEGGRTPAPG*LQRSDC Trigger: GCAGTCAGAACGTTGCAGCCATCCAGGAGCAGGTGT...CCTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR TCA 90 bp | GGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGATGGCTGCAACGTTCTaGCTGCATGTGCCGATGAGT | + |
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Preference number: 4 (lower is better) Translates to: GPNKAWQSLKRECLGRREMAATF*LHVPMS Trigger: ACTCATCGGCACATGCAGTCAGAACGTTGCAGCCAT...CTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR GCA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGTTGACCTTGAGCTTCTaGACTTGCTGCTGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGPNKAWQSLKRECLGRRLTLSF*TCCCMA Trigger: GGCCATGCAGCAGCAAGTGCAGAAGCTCAAGGTCAA...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CCA 90 bp | GCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGGGCTGGACCATCCCCATaGAGCAAAGGGTTCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: AQTRPGNPLRESAWEGGRAGPSP*SKGFLC Trigger: ACAAAGGAACCCTTTGCTCCATGGGGATGGTCCAGC...CCTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS GCA 90 bp | ATTGCGGGTGTGGCCTGGGACAGGACCCGGAGGCAGTTCTTCATCTaGTCCACCTCCTCTCGCTGGCCCCGGAAGGCGGCCGACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: IAGVAWDRTRRQFFI*STSSRWPRKAADMA Trigger: AGCCATGTCGGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGGAGCAGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS-3UTR CAA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCGCATGTGCCGATGAGTaGTGCTGCCCTCCAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: FSATPPGGYPEMGWQAQAACADE*CCPPAQ Trigger: CTGCGCTGGAGGGCAGCACAACTCATCGGCACATGC...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS CCA 90 bp | GACAGGACCCGGAGGCAGTTCTTCATCTGCTCCACCTCCTCTCGCTaGCCCCGGAAGGCGGCCGACATGGCTTCCTGCAGCCATTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: DRTRRQFFICSTSSR*PRKAADMASCSHWR Trigger: ACGCCAATGGCTGCAGGAAGCCATGTCGGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGGAGCAGATGAAGAACTGCCTCCGGGTCCTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 90 bp | GGTCTGCCAGCAGCTCTAGTGCGCCTTCACGCTCCTGCTGGTCAGTaGCCAGCTCAGCTTCGCCAGCCATTGCGGGTGTGGCCTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: GLPAALVRLHAPAGQ*PAQLRQPLRVWPGT Trigger: TGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAAGGCGCACTAGAGCTGCTGGCAGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 90 bp | TCGCACAGGTCTGCCAGCAGCTCTAGTGCGCCTTCACGCTCCTGCTaGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTGCGGGTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: SHRSASSSSAPSRSC*SVASSASPAIAGVA Trigger: GGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAAGGCGCACTAGAGCTGCTGGCAGACCTGTGCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS-3UTR CAA 90 bp | TTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGCCGAGCAAAGGGTTCCTTaGTGCTCAGGGTGGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: FSATPPGGYPEMGWQAQAEQRVP*CSGWPT Trigger: GGTGGGCCACCCTGAGCACAAAGGAACCCTTTGCTC...GGCCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS GCA 90 bp | CTGACTGCATGTGCCGATGAGTTGTGCTGCCCTCCAGCGCAGCCCTaGAGCCCCTGCCTCCAGGTATCGACCCACCAGCAGATGCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTACADELCCPPAQP*SPCLQVSTHQQMHA Trigger: GGCATGCATCTGCTGGTGGGTCGATACCTGGAGGCAGGGGCTGCAGGGCTGCGCTGGAGGGCAGCACAACTCATCGGCACATGCAGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 90 bp | CTCGTACCGTGTCGCAGGAGTCCCGGTCGAGCAGCCGAAGTAGCTTaGGCAGGGCACCCAAGCCCAACACCTGCTCCTGGATGGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVPCRRSPGRAAEVA*AGHPSPTPAPGWLQ Trigger: TTGCAGCCATCCAGGAGCAGGTGTTGGGCTTGGGTGCCCTGCGCAAGCTACTTCGGCTGCTCGACCGGGACTCCTGCGACACGGTACGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 90 bp | TCATCTGCTCCACCTCCTCTCGCTGGCCCCGGAAGGCGGCCGACATaGCTTCCTGCAGCCATTGGCGTCTCTCCTCGCTCATGGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSAPPPLAGPGRRPT*LPAAIGVSPRSWVL Trigger: CAGAACCCATGAGCGAGGAGAGACGCCAATGGCTGCAGGAAGCCATGTCGGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGGAGCAGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 90 bp | CCTGCTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTGCGGGTGTaGCCTGGGACAGGACCCGGAGGCAGTTCTTCATCTGCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PAGQWPAQLRQPLRV*PGTGPGGSSSSAPP Trigger: AGGTGGAGCAGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 90 bp | TTCACGCTCCTGCTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTaGGGGTGTGGCCTGGGACAGGACCCGGAGGCAGTTCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTLLLVSGQLSFASH*GCGLGQDPEAVLHL Trigger: CAGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 90 bp | TTCTCGCACAGGTCTGCCAGCAGCTCTAGTGCGCCTTCACGCTCCTaGTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTGCGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSHRSASSSSAPSRS*WSVASSASPAIAGV Trigger: CACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAAGGCGCACTAGAGCTGCTGGCAGACCTGTGCGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 90 bp | TGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTGCGGGTGTGGCCTaGGACAGGACCCGGAGGCAGTTCTTCATCTGCTCCACCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSVASSASPAIAGVA*DRTRRQFFICSTSS Trigger: AGAGGAGGTGGAGCAGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS-3UTR CAA 90 bp | CTTTCTCAGCAACCCCTCCAGGGGGCTACCCAGAGATGGGCTGGCAGGCCCAGGATGGCGAAGAGAGCCTaGACTCGTACCGTGTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSQQPLQGATQRWAGRPRMAKRA*TRTVSQ Trigger: CTGCGACACGGTACGAGTCAAGGCTCTCTTCGCCAT...CCTGGGCCTGCCAGCCCATCTCTGGGTAGCCCCCTGGAGGGGTTGCTGAGAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS TCA 90 bp | AGGGCACCCAAGCCCAACACCTGCTCCTGGATGGCTGCAACGTTCTaGCTGCATGTGCCGATGAGTTGTGCTGCCCTCCAGCGCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAPKPNTCSWMAATF*LHVPMSCAALQRSP Trigger: AGGGCTGCGCTGGAGGGCAGCACAACTCATCGGCACATGCAGTCAGAACGTTGCAGCCATCCAGGAGCAGGTGTTGGGCTTGGGTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGCAGCTTCGCCAGCCATaGCGGGTGTGGCCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PGPNKAWQSLKRECLGRRQLRQP*RVWPGT Trigger: TGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTG...CCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CAA 90 bp | GGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGAGCAGCCGAAGTAGCTaGCGCAGGGCACCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPNKAWQSLKRECLGRRESSRSS*RRAPKP Trigger: GGGCTTGGGTGCCCTGCGCAAGCTACTTCGGCTGCT...CTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS GCA 90 bp | TGCATGGCCCGCATCAGCACTGAGAATCCATCCAGGCGGAGGAACTaGAGCAACCCAGCCTCCTGCTCTCGGACAAGACAGGAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CMARISTENPSRRRN*SNPASCSRTRQEMA Trigger: CGCCATCTCCTGTCTTGTCCGAGAGCAGGAGGCTGGGTTGCTGCAGTTCCTCCGCCTGGATGGATTCTCAGTGCTGATGCGGGCCATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS CCA 90 bp | GGAGCAAGGCTGGACTTGGAATTTCCAATTCTGCTCAGGGTCTCCTaGTACTCCTCACGCTGCTGCAGCAGCTGGCAGCGGTGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GARLDLEFPILLRVS*YSSRCCSSWQRWRS Trigger: GCTCCGCCACCGCTGCCAGCTGCTGCAGCAGCGTGAGGAGTACCAGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAGCCTTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS GCA 90 bp | ACGAGCAACCCTGAGAGGCCGGAGGCAACGCAAGAGGGAGGCGACTaGCCCCTGAGCCTTTGTCTGCCATGGACTTTCTGTGAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSNPERPEATQEGGD*PLSLCLPWTFCEGR Trigger: TCTTCCTTCACAGAAAGTCCATGGCAGACAAAGGCTCAGGGGGCAGTCGCCTCCCTCTTGCGTTGCCTCCGGCCTCTCAGGGTTGCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206946.2 |
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| CDS GCA 90 bp | TGCTCATGGAAAGGACTGTGTTCTGTCCTCACAAGGGCCACCAGCTaGTGGACCATCCCCATGGAGCAAAGGGTTCCTTTGTGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSWKGLCSVLTRATS*WTIPMEQRVPLCSG Trigger: CCCTGAGCACAAAGGAACCCTTTGCTCCATGGGGATGGTCCAGCAGCTGGTGGCCCTTGTGAGGACAGAACACAGTCCTTTCCATGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS CCA 90 bp | TCATGGAAAGGACTGTGTTCTGTCCTCACAAGGGCCACCAGCTGCTaGACCATCCCCATGGAGCAAAGGGTTCCTTTGTGCTCAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWKGLCSVLTRATSC*TIPMEQRVPLCSGW Trigger: CCACCCTGAGCACAAAGGAACCCTTTGCTCCATGGGGATGGTCCAGCAGCTGGTGGCCCTTGTGAGGACAGAACACAGTCCTTTCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS GCA 90 bp | AAGTTCTGCAGCAGGAATGCTGACTTGACCTTGAGCTTCTGCACTTaGTGCTGCATGGCCCGCATCAGCACTGAGAATCCATCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KFCSRNADLTLSFCT*CCMARISTENPSRR Trigger: CCGCCTGGATGGATTCTCAGTGCTGATGCGGGCCATGCAGCAGCAAGTGCAGAAGCTCAAGGTCAAGTCAGCATTCCTGCTGCAGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS CCA 90 bp | GCCTGTAGATGGTGGGCACCTCTAAGGGTGGAGCAAGGCTGGACTTaGAATTTCCAATTCTGCTCAGGGTCTCCTGGTACTCCTCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: ACRWWAPLRVEQGWT*NFQFCSGSPGTPHA Trigger: AGCGTGAGGAGTACCAGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAGCCTTGCTCCACCCTTAGAGGTGCCCACCATCTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS-3UTR CAA 90 bp | GCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGGCAGAAATCTGCTGCATaGTCCATGTTCTCGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQTRPGNPLRESAWEGGRQKSAA*SMFSHR Trigger: CCTGTGCGAGAACATGGACAATGCAGCAGATTTCTG...CCTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS-3UTR CAA 90 bp | GGCCCAAACAAGGCCTGGCAATCCCTTAAGAGAGAGTGCCTGGGAAGGAGGGAGAATGCTGACTTGACCTaGAGCTTCTGCACTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPNKAWQSLKRECLGRRENADLT*SFCTCC Trigger: GCAGCAAGTGCAGAAGCTCAAGGTCAAGTCAGCATT...CTCCCTCCTTCCCAGGCACTCTCTCTTAAGGGATTGCCAGGCCTTGTTTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS GCA 90 bp | ACCAGCAAGTTCTGCAGCAGGAATGCTGACTTGACCTTGAGCTTCTaGACTTGCTGCTGCATGGCCCGCATCAGCACTGAGAATCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TSKFCSRNADLTLSF*TCCCMARISTENPS Trigger: GGATGGATTCTCAGTGCTGATGCGGGCCATGCAGCAGCAAGTGCAGAAGCTCAAGGTCAAGTCAGCATTCCTGCTGCAGAACTTGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS CCA 90 bp | TTGTTTGCCTGTAGATGGTGGGCACCTCTAAGGGTGGAGCAAGGCTaGACTTGGAATTTCCAATTCTGCTCAGGGTCTCCTGGTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFACRWWAPLRVEQG*TWNFQFCSGSPGTP Trigger: AGGAGTACCAGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAGCCTTGCTCCACCCTTAGAGGTGCCCACCATCTACAGGCAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS CCA 90 bp | GCAACGCAAGAGGGAGGCGACTGCCCCCTGAGCCTTTGTCTGCCATaGACTTTCTGTGAAGGAAGAATGTGTTTAAAGGAAATTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ATQEGGDCPLSLCLP*TFCEGRMCLKEIDG Trigger: ACCATCAATTTCCTTTAAACACATTCTTCCTTCACAGAAAGTCCATGGCAGACAAAGGCTCAGGGGGCAGTCGCCTCCCTCTTGCGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206946.2 |
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| CDS GCA 72 bp | GTGGCCTGGGACAGGACCCGGAGGCAGTTCTTCATCTaGTCCACCTCCTCTCGCTGGCCCCGGAAGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VAWDRTRRQFFI*STSSRWPRKAA Trigger: GGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGGAGCAGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | CCACCTCCTCTCGCTGGCCCCGGAAGGCGGCCGACATaGCTTCCTGCAGCCATTGGCGTCTCTCCTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPPLAGPGRRPT*LPAAIGVSPRS Trigger: TGAGCGAGGAGAGACGCCAATGGCTGCAGGAAGCCATGTCGGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | AGCTCCTCCTGGTACTCCTCACGCTGCTGCAGCAGCTaGCAGCGGTGGCGGAGCAGTTCCTCCAGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSWYSSRCCSS*QRWRSSSSRPS Trigger: GCTGGGCCTGGAGGAACTGCTCCGCCACCGCTGCCAGCTGCTGCAGCAGCGTGAGGAGTACCAGGAGGAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS CAA 72 bp | GCCCCGGAAGGCGGCCGACATGGCTTCCTGCAGCCATaGGCGTCTCTCCTCGCTCATGGGTTCTGGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: APEGGRHGFLQP*ASLLAHGFWRG Trigger: CCCCCTCCAGAACCCATGAGCGAGGAGAGACGCCAATGGCTGCAGGAAGCCATGTCGGCCGCCTTCCGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CAA 72 bp | CCTGCTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATaGCGGGTGTGGCCTGGGACAGGACCCGGAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAGQWPAQLRQP*RVWPGTGPGGS Trigger: ACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 72 bp | CTGCTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTaGGGGTGTGGCCTGGGACAGGACCCGGAGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLVSGQLSFASH*GCGLGQDPEAV Trigger: AACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 72 bp | TGTGCCGATGAGTTGTGCTGCCCTCCAGCGCAGCCCTaGAGCCCCTGCCTCCAGGTATCGACCCACCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CADELCCPPAQP*SPCLQVSTHQQ Trigger: CTGCTGGTGGGTCGATACCTGGAGGCAGGGGCTGCAGGGCTGCGCTGGAGGGCAGCACAACTCATCGGCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | CGGAGGCAGTTCTTCATCTGCTCCACCTCCTCTCGCTaGCCCCGGAAGGCGGCCGACATGGCTTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRQFFICSTSSR*PRKAADMASCS Trigger: GCTGCAGGAAGCCATGTCGGCCGCCTTCCGGGGCCAGCGAGAGGAGGTGGAGCAGATGAAGAACTGCCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 72 bp | TCTCGCTGGCCCCGGAAGGCGGCCGACATGGCTTCCTaGAGCCATTGGCGTCTCTCCTCGCTCATGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRWPRKAADMAS*SHWRLSSLMGS Trigger: AGAACCCATGAGCGAGGAGAGACGCCAATGGCTGCAGGAAGCCATGTCGGCCGCCTTCCGGGGCCAGCGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | GCCAGCTCAGCTTCGCCAGCCATTGCGGGTGTGGCCTaGGACAGGACCCGGAGGCAGTTCTTCATCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASSASPAIAGVA*DRTRRQFFICS Trigger: GGAGCAGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CAA 90 bp | ACTCGTACCGTGTCGCAGGAGTCCCGGTCGAGCAGCCGAAGTAGCTaGCGCAGGGCACCCAAGCCCAACACCTGCTCCTGGATGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TRTVSQESRSSSRSS*RRAPKPNTCSWMAA Trigger: TGCAGCCATCCAGGAGCAGGTGTTGGGCTTGGGTGCCCTGCGCAAGCTACTTCGGCTGCTCGACCGGGACTCCTGCGACACGGTACGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | TCTGCCAGCAGCTCTAGTGCGCCTTCACGCTCCTGCTaGTCAGTGGCCAGCTCAGCTTCGCCAGCCATTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SASSSSAPSRSC*SVASSASPAIA Trigger: CGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAAGGCGCACTAGAGCTGCTGGCAGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CAA 90 bp | CTTCACGCTCCTGCTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATaGCGGGTGTGGCCTGGGACAGGACCCGGAGGCAGTTCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LHAPAGQWPAQLRQP*RVWPGTGPGGSSSS Trigger: AGATGAAGAACTGCCTCCGGGTCCTGTCCCAGGCCACACCCGCAATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 72 bp | AGGTCTGCCAGCAGCTCTAGTGCGCCTTCACGCTCCTaGTGGTCAGTGGCCAGCTCAGCTTCGCCAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RSASSSSAPSRS*WSVASSASPAI Trigger: AATGGCTGGCGAAGCTGAGCTGGCCACTGACCAGCAGGAGCGTGAAGGCGCACTAGAGCTGCTGGCAGACCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 72 bp | CCATCCAGGCGGAGGAACTGCAGCAACCCAGCCTCCTaGTCTCGGACAAGACAGGAGATGGCGAAGAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSRRRNCSNPAS*SRTRQEMAKRA Trigger: GGCTCTCTTCGCCATCTCCTGTCTTGTCCGAGAGCAGGAGGCTGGGTTGCTGCAGTTCCTCCGCCTGGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS TCA 72 bp | GCTCTCGGACAAGACAGGAGATGGCGAAGAGAGCCTTaGCTCGTACCGTGTCGCAGGAGTCCCGGTCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ALGQDRRWRREP*LVPCRRSPGRA Trigger: TGCTCGACCGGGACTCCTGCGACACGGTACGAGTCAAGGCTCTCTTCGCCATCTCCTGTCTTGTCCGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS TCA 72 bp | AGGCCCAGCTCAGGCTCCCGGCATTCACGAACACCCTaGGGGAAATCTGTCACAAGGCTGCACAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPSSGSRHSRTP*GKSVTRLHRAP Trigger: TGGAGCCCTGTGCAGCCTTGTGACAGATTTCCCTCAGGGTGTTCGTGAATGCCGGGAGCCTGAGCTGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205474.2 |
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| CDS TCA 72 bp | GGCCGGAGGCAACGCAAGAGGGAGGCGACTGCCCCCTaGGCCTTTGTCTGCCATGGACTTTCTGTGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRRQRKREATAP*AFVCHGLSVKE Trigger: TTCCTTCACAGAAAGTCCATGGCAGACAAAGGCTCAGGGGGCAGTCGCCTCCCTCTTGCGTTGCCTCCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206946.2 |
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| CDS CAA 72 bp | TGCTCTCGGACAAGACAGGAGATGGCGAAGAGAGCCTaGACTCGTACCGTGTCGCAGGAGTCCCGGTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSRTRQEMAKRA*TRTVSQESRSS Trigger: GCTCGACCGGGACTCCTGCGACACGGTACGAGTCAAGGCTCTCTTCGCCATCTCCTGTCTTGTCCGAGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS TCA 72 bp | CTTCTGCACTTGCTGCTGCATGGCCCGCATCAGCACTaGGAATCCATCCAGGCGGAGGAACTGCAGCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: LLHLLLHGPHQH*ESIQAEELQQP Trigger: GGGTTGCTGCAGTTCCTCCGCCTGGATGGATTCTCAGTGCTGATGCGGGCCATGCAGCAGCAAGTGCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS GCA 72 bp | GCAGCCCCTGCCTCCAGGTATCGACCCACCAGCAGATaGATGCCTGACAGCTGGCAGAAATCTGCTGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: AAPASRYRPTSR*MPDSWQKSAAL Trigger: CAATGCAGCAGATTTCTGCCAGCTGTCAGGCATGCATCTGCTGGTGGGTCGATACCTGGAGGCAGGGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS TCA 72 bp | AAGCCCAACACCTGCTCCTGGATGGCTGCAACGTTCTaGCTGCATGTGCCGATGAGTTGTGCTGCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KPNTCSWMAATF*LHVPMSCAALQ Trigger: CTGGAGGGCAGCACAACTCATCGGCACATGCAGTCAGAACGTTGCAGCCATCCAGGAGCAGGTGTTGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS GCA 72 bp | CCCCTGCCTCCAGGTATCGACCCACCAGCAGATGCATaGCTGACAGCTGGCAGAAATCTGCTGCATTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PLPPGIDPPADA*LTAGRNLLHCP Trigger: TGGACAATGCAGCAGATTTCTGCCAGCTGTCAGGCATGCATCTGCTGGTGGGTCGATACCTGGAGGCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | CTGGACTTGGAATTTCCAATTCTGCTCAGGGTCTCCTaGTACTCCTCACGCTGCTGCAGCAGCTGGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: LDLEFPILLRVS*YSSRCCSSWQR Trigger: CCGCTGCCAGCTGCTGCAGCAGCGTGAGGAGTACCAGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS GCA 72 bp | AAAGGACTGTGTTCTGTCCTCACAAGGGCCACCAGCTaGTGGACCATCCCCATGGAGCAAAGGGTTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KGLCSVLTRATS*WTIPMEQRVPL Trigger: CAAAGGAACCCTTTGCTCCATGGGGATGGTCCAGCAGCTGGTGGCCCTTGTGAGGACAGAACACAGTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079970.6 |
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| CDS GCA 72 bp | AGCAGGAATGCTGACTTGACCTTGAGCTTCTGCACTTaGTGCTGCATGGCCCGCATCAGCACTGAGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SRNADLTLSFCT*CCMARISTENP Trigger: TGGATTCTCAGTGCTGATGCGGGCCATGCAGCAGCAAGTGCAGAAGCTCAAGGTCAAGTCAGCATTCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 |
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| CDS CCA 72 bp | AGGTATCGACCCACCAGCAGATGCATGCCTGACAGCTaGCAGAAATCTGCTGCATTGTCCATGTTCTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: RYRPTSRCMPDS*QKSAALSMFSH Trigger: GTGCGAGAACATGGACAATGCAGCAGATTTCTGCCAGCTGTCAGGCATGCATCTGCTGGTGGGTCGATACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079970.6 ENSMUST00000205952.2 ENSMUST00000206306.2 ENSMUST00000206946.2 |
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| CDS CCA 72 bp | TGGTGGGCACCTCTAAGGGTGGAGCAAGGCTGGACTTaGAATTTCCAATTCTGCTCAGGGTCTCCTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: WWAPLRVEQGWT*NFQFCSGSPGT Trigger: AGTACCAGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAGCCTTGCTCCACCCTTAGAGGTGCCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS CAA 72 bp | ATGGTGGGCACCTCTAAGGGTGGAGCAAGGCTGGACTaGGAATTTCCAATTCTGCTCAGGGTCTCCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: MVGTSKGGARLD*EFPILLRVSWY Trigger: GTACCAGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAGCCTTGCTCCACCCTTAGAGGTGCCCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS CCA 72 bp | TGTAGATGGTGGGCACCTCTAAGGGTGGAGCAAGGCTaGACTTGGAATTTCCAATTCTGCTCAGGGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CRWWAPLRVEQG*TWNFQFCSGSP Trigger: AGGAGACCCTGAGCAGAATTGGAAATTCCAAGTCCAGCCTTGCTCCACCCTTAGAGGTGCCCACCATCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205474.2 |
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| CDS TCA 72 bp | AATGGTGTCCGGATGGGTCGACTCTTGAAGGTCTGCTaGGAAGGTGGAGTTTTGAAGGTGTTAGGAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NGVRMGRLLKVC*EGGVLKVLGVF Trigger: GAAGACTCCTAACACCTTCAAAACTCCACCTTCTCAGCAGACCTTCAAGAGTCGACCCATCCGGACACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206946.2 |
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