Pregenerated sensors for HSPBAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022849Ensembl transcript IDs: ENSMUST00000023555.6, ENSMUST00000231579.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTCCTGTTTCTCAGCCCTCGATGTGAGGCTCGGGCCCTGGGCCTaGTCCACTTCCATGTGCTCCTCCTGCACACGTGGCTCCGCCCCG | + |
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Preference number: 1 (lower is better) Translates to: ASCFSALDVRLGPWA*STSMCSSCTRGSAP Trigger: CGGGGCGGAGCCACGTGTGCAGGAGGAGCACATGGAAGTGGAGCAGGCCCAGGGCCCGAGCCTCACATCGAGGGCTGAGAAACAGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR GCA 90 bp | GTGAGGCTCGGGCCCTGGGCCTGCTCCACTTCCATGTGCTCCTCCTaGACACGTGGCTCCGCCCCGTTTGCGCTCAGCACTTGCAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VRLGPWACSTSMCSS*TRGSAPFALSTCNS Trigger: AGAGTTGCAAGTGCTGAGCGCAAACGGGGCGGAGCCACGTGTGCAGGAGGAGCACATGGAAGTGGAGCAGGCCCAGGGCCCGAGCCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR TCA 90 bp | CTGGGCCAAACAGGCTCACGGCCTCCTGTTTCTCAGCCCTCGATGTaGGGCTCGGGCCCTGGGCCTGCTCCACTTCCATGTGCTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: LGQTGSRPPVSQPSM*GSGPGPAPLPCAPP Trigger: AGGAGGAGCACATGGAAGTGGAGCAGGCCCAGGGCCCGAGCCTCACATCGAGGGCTGAGAAACAGGAGGCCGTGAGCCTGTTTGGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | CGGGCCCTGGGCCTGCTCCACTTCCATGTGCTCCTCCTGCACACGTaGCTCCGCCCCGTTTGCGCTCAGCACTTGCAACTCTACTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RALGLLHFHVLLLHT*LRPVCAQHLQLYCF Trigger: AAAGCAGTAGAGTTGCAAGTGCTGAGCGCAAACGGGGCGGAGCCACGTGTGCAGGAGGAGCACATGGAAGTGGAGCAGGCCCAGGGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR TCA 90 bp | GGTGCGGGTCCTCTGCAGTCTTCAGTGTACACACGAGCATGCGGGTaGTGGCCTCCTCCACCCGCGCTAGGTGGTCCTCTTCCAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: GAGPLQSSVYTRACG*WPPPPALGGPLPAQ Trigger: TTGAGCTGGAAGAGGACCACCTAGCGCGGGTGGAGGAGGCCATCACCCGCATGCTCGTGTGTACACTGAAGACTGCAGAGGACCCGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR GCA 90 bp | AACCTCAGTGGGGTTCAGCCAGGTCCTGGGGTGGTGCGGGTCCTCTaGAGTCTTCAGTGTACACACGAGCATGCGGGTGATGGCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: NLSGVQPGPGVVRVL*SLQCTHEHAGDGLL Trigger: GAGGAGGCCATCACCCGCATGCTCGTGTGTACACTGAAGACTGCAGAGGACCCGCACCACCCCAGGACCTGGCTGAACCCCACTGAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | CCTCGTGAGATGTCTCCTCAACCTCAGTGGGGTTCAGCCAGGTCCTaGGGTGGTGCGGGTCCTCTGCAGTCTTCAGTGTACACACGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PREMSPQPQWGSARS*GGAGPLQSSVYTRA Trigger: TGCTCGTGTGTACACTGAAGACTGCAGAGGACCCGCACCACCCCAGGACCTGGCTGAACCCCACTGAGGTTGAGGAGACATCTCACGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR GCA 90 bp | AGATTCTTCGCTGTCGCCTTCCAGTGCGCCTCCTCTCTCTTCGGATaGTGGTGTCACAGGGATCAGATCTGGGCCAAACAGGCTCACGGC | + |
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Preference number: 1 (lower is better) Translates to: RFFAVAFQCASSLFG*WCHRDQIWAKQAHG Trigger: GCCGTGAGCCTGTTTGGCCCAGATCTGATCCCTGTGACACCAGCATCCGAAGAGAGAGGAGGCGCACTGGAAGGCGACAGCGAAGAATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | TGCGCCTCCTCTCTCTTCGGATGCTGGTGTCACAGGGATCAGATCTaGGCCAAACAGGCTCACGGCCTCCTGTTTCTCAGCCCTCGATGT | + |
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Preference number: 1 (lower is better) Translates to: CASSLFGCWCHRDQI*AKQAHGLLFLSPRC Trigger: ACATCGAGGGCTGAGAAACAGGAGGCCGTGAGCCTGTTTGGCCCAGATCTGATCCCTGTGACACCAGCATCCGAAGAGAGAGGAGGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | CCAAAATTGTCTGAACAGGACGCTCAAGCGATGCCGAACGAACGCTaGGGCCATTCTGTAGCCATGCCCATCTACCCCACTTCAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PKLSEQDAQAMPNER*GHSVAMPIYPTSED Trigger: GTCCTCTGAAGTGGGGTAGATGGGCATGGCTACAGAATGGCCCCAGCGTTCGTTCGGCATCGCTTGAGCGTCCTGTTCAGACAATTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | GGACAGGACAGAACCGGTTTGCCTGTGAACTCTGCAGCTATAGTGTaGTCGCCTGTGCAAGAGCAAGCCAGTCAATATTCTAATGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: GQDRTGLPVNSAAIV*SPVQEQASQYSNVD Trigger: GTCCACATTAGAATATTGACTGGCTTGCTCTTGCACAGGCGACCACACTATAGCTGCAGAGTTCACAGGCAAACCGGTTCTGTCCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR GCA 90 bp | ACTTGTCCTTCAGTATTGGACGATACTAAGCATGCGTCTGAGCTCTaGCGGCCCATGCAGAGCCAGAGTACTTACCAGTTGATTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: TCPSVLDDTKHASEL*RPMQSQSTYQLIFL Trigger: CAGGAAAATCAACTGGTAAGTACTCTGGCTCTGCATGGGCCGGCAGAGCTCAGACGCATGCTTAGTATCGTCCAATACTGAAGGACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR GCA 90 bp | CAGGGTAGTTTATGGTCATCCGTAACTAAAGATCCAGGGAGCCAATaGCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGC | + |
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Preference number: 1 (lower is better) Translates to: QGSLWSSVTKDPGSQ*PLLTCEGTAHINSC Trigger: GCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCTCCCTGGATCTTTAGTTACGGATGACCATAAACTACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | ATGCAGAGCCAGAGTACTTACCAGTTGATTTTCCTGACTCAGATGTaGTCCTTGGAGATGCAGGGTGATGTGGGAACAGCTCATGAGCGT | + |
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Preference number: 1 (lower is better) Translates to: MQSQSTYQLIFLTQM*SLEMQGDVGTAHER Trigger: ACGCTCATGAGCTGTTCCCACATCACCCTGCATCTCCAAGGACCACATCTGAGTCAGGAAAATCAACTGGTAAGTACTCTGGCTCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR TCA 90 bp | TCTCATGAAAGAAAGACTTCCTGCAGAAGACCGTCCCAGCTTCTCTaGGCCCAGTCGACACTGAGTCCATTCTGTAACAACCCTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: SHERKTSCRRPSQLL*AQSTLSPFCNNPMY Trigger: ATACATAGGGTTGTTACAGAATGGACTCAGTGTCGACTGGGCTCAGAGAAGCTGGGACGGTCTTCTGCAGGAAGTCTTTCTTTCATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CCA 90 bp | GCTGCGTCCAGAAGGAAAGTTGAGTTTTCTTCAGTGGTACAACCCTaGTTAACCAGGGCTAAGTGGATAGCCATATTATATGTATCTGGC | + |
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Preference number: 1 (lower is better) Translates to: AASRRKVEFSSVVQP*LTRAKWIAILYVSG Trigger: GCCAGATACATATAATATGGCTATCCACTTAGCCCTGGTTAACCAGGGTTGTACCACTGAAGAAAACTCAACTTTCCTTCTGGACGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR TCA 90 bp | TGTGAGCTAGCTAGTTTGGCTACTGAGCGATGTGCTGGAAAGAGGTaGCCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATG | + |
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Preference number: 1 (lower is better) Translates to: CELASLATERCAGKR*PQWHFIGESTFINM Trigger: CATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGGTCACCTCTTTCCAGCACATCGCTCAGTAGCCAAACTAGCTAGCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR TCA 90 bp | GTAAATGCTTGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTACTTaGTTAGTGTTTGTAACAATGGAGAGCGCTGCAGCCTGCCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: VNACVPLKPEESCLT*LVFVTMESAAACQN Trigger: ATTTTGGCAGGCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACAAGCATTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR GCA 90 bp | GAAACTGTGCCTCCTGAGAAGCTTCATAAAGTAATGAAACGTAAATaGTTGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTACTTGATT | + |
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Preference number: 1 (lower is better) Translates to: ETVPPEKLHKVMKRK*LCAFKTRGKLSYLI Trigger: AATCAAGTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACAAGCATTTACGTTTCATTACTTTATGAAGCTTCTCAGGAGGCACAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCCTAGGCGTAGGCCTGGGTTAGCAGACCGAGGCAGTGAACCTCTAAGAAGCCAGGTCCTGGGGTaGTGCGGGTCCTCTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SRPRRRPGLADRGSEPLRSQVLG*CGSSAV Trigger: GACTGCAGAGGACCCGCACCACCCCAGGACCTGGCT...TCTTAGAGGTTCACTGCCTCGGTCTGCTAACCCAGGCCTACGCCTAGGCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | CTCGCCCCTTTGCTGGTTTGCTGTCTCCTGGCACAGGGCAGTTCTGCAAAGTGTGTGAGGCTCGGGCCCTaGGCCTGCTCCACTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: LAPLLVCCLLAQGSSAKCVRLGP*ACSTSM Trigger: CATGGAAGTGGAGCAGGCCCAGGGCCCGAGCCTCAC...ACACTTTGCAGAACTGCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCAATGCCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGCAGGCTCGGGCCCTGGGCCTaGTCCACTTCCATGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQCPLLTCEGTAHINSCRLGPWA*STSMCS Trigger: GGAGCACATGGAAGTGGAGCAGGCCCAGGGCCCGAG...CCTGCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCAATGCCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGCAGGCCGTCCCAGCTTCTCTaGGCCCAGTCGACACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SQCPLLTCEGTAHINSCRPSQLL*AQSTLS Trigger: ACTCAGTGTCGACTGGGCTCAGAGAAGCTGGGACGG...CCTGCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAGATGCAGGGTGATGTGGGAACAGCTCATGAGCGTTTTCACGGTGCTTTCCAGCCAGGACCCCTaGCTTGTGAGGCCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: PWRCRVMWEQLMSVFTVLSSQDP*LVRPGS Trigger: ACTTCCAGGCCTCACAAGCCAGGGGTCCTGGCTGGA...AAGCACCGTGAAAACGCTCATGAGCTGTTCCCACATCACCCTGCATCTCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | GATCAGGGAGGGGTGAGGCAAAGCAATGGCTTTTGGAGTGGACAGGACAGAACCGTGGTGCGGGTCCTCTaGAGTCTTCAGTGTACACAC | + |
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Preference number: 2 (lower is better) Translates to: DQGGVRQSNGFWSGQDRTVVRVL*SLQCTH Trigger: GTGTGTACACTGAAGACTGCAGAGGACCCGCACCAC...GGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | CTCGCCCCTTTGCTGGTTTGCTGTCTCCTGGCACAGGGCAGTTCTGCAAAGTGTTCCTCTCTCTTCGGATaGTGGTGTCACAGGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: LAPLLVCCLLAQGSSAKCSSLFG*WCHRDQ Trigger: CTGATCCCTGTGACACCAGCATCCGAAGAGAGAGGA...ACACTTTGCAGAACTGCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAGATGCAGGGTGATGTGGGAACAGCTCATGAGCGTTTTCACGGTGCTTCACAGGGATCAGATCTaGGCCAAACAGGCTCACGGC | + |
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Preference number: 2 (lower is better) Translates to: PWRCRVMWEQLMSVFTVLHRDQI*AKQAHG Trigger: GCCGTGAGCCTGTTTGGCCCAGATCTGATCCCTGTG...AAGCACCGTGAAAACGCTCATGAGCTGTTCCCACATCACCCTGCATCTCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGCCTAGGCGTAGGCCTGGGTTAGCAGACCGAGGCAGTGAACCTCTAAGATGGGTCCTTTCTAGATaGTCCTTCCTTACCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SRPRRRPGLADRGSEPLRWVLSR*SFLTQG Trigger: TCCTTGGGTAAGGAAGGATCATCTAGAAAGGACCCA...TCTTAGAGGTTCACTGCCTCGGTCTGCTAACCCAGGCCTACGCCTAGGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCCTAGGCGTAGGCCTGGGTTAGCAGACCGAGGCAGTGAACCTCTAAGATGGAGAAAGAGGGGCTaGGAGTTTTTACAGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SRPRRRPGLADRGSEPLRWRKRG*EFLQVR Trigger: TCTGACCTGTAAAAACTCCCAGCCCCTCTTTCTCCA...TCTTAGAGGTTCACTGCCTCGGTCTGCTAACCCAGGCCTACGCCTAGGCCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCAATGCCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGCAGGATGCAGAGAGGGGAATaGGGCAGTTTACCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: SQCPLLTCEGTAHINSCRMQRGE*GSLPGQ Trigger: CTGTCCTGGTAAACTGCCTCATTCCCCTCTCTGCAT...CCTGCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGAGCCCCTTTGCTGGTTTaGTGTCTCCTGGCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: REGNEAVYQDSSIDRLQRAPLLV*CLLAQG Trigger: GCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGC...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAGATGCAGGGTGATGTGGGAACAGCTCATGAGCGTTTTCACGGTGCTTTGGTTTGCTGTCTCCTaGCACAGGGCAGTTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: PWRCRVMWEQLMSVFTVLWFAVS*HRAVLQ Trigger: TTGCAGAACTGCCCTGTGCCAGGAGACAGCAAACCA...AAGCACCGTGAAAACGCTCATGAGCTGTTCCCACATCACCCTGCATCTCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAATGCCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGCAGGCTCAGATGTGGTCCTTaGAGATGCAGGGTGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: SQCPLLTCEGTAHINSCRLRCGP*RCRVMW Trigger: CCACATCACCCTGCATCTCCAAGGACCACATCTGAG...CCTGCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAATGCCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGCAGGTCTCTCTTCGGATGCTaGTGTCACAGGGATCAGATC | + |
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Preference number: 2 (lower is better) Translates to: SQCPLLTCEGTAHINSCRSLFGC*CHRDQI Trigger: GATCTGATCCCTGTGACACCAGCATCCGAAGAGAGA...CCTGCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTAAGAACACTGGGTGGCGAACGCCTTTaGTCCCAGCACCCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: SGTGEMDRVLTYQCLRTLGGERL*SQHPGS Trigger: ACTTCCAGGGTGCTGGGATCAAAGGCGTTCGCCACC...CAGTGTTCTTAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | AACCTAAACTCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTACAGGTCCTGGGGTGGTaGGGGTCCTCTGCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: NLNSGTGEMDRVLTYQCLQVLGW*GSSAVF Trigger: GAAGACTGCAGAGGACCCGCACCACCCCAGGACCTG...TAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGAGTTTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGAAAGGGGATTTGGAAGTaGCTGGAGGTGCAGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: REGNEAVYQDSSIDRLQRKGIWK*LEVQCS Trigger: GCTGCACTGCACCTCCAGCCACTTCCAAATCCCCTT...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | AGTCTAAGGTATACAGTGGGACCCTGTAAAAACAAACTCTCAATCCAGCCAGGATGCTCCACTTCCATGTaGTCCTCCTGCACACGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SLRYTVGPCKNKLSIQPGCSTSM*SSCTRG Trigger: GCCACGTGTGCAGGAGGAGCACATGGAAGTGGAGCA...TCCTGGCTGGATTGAGAGTTTGTTTTTACAGGGTCCCACTGTATACCTTAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATGTACAAACTCACCGGTTCAGCCAGGTCCTaGGGTGGTGCGGGTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PQWHFIGESTFINMYKLTGSARS*GGAGPL Trigger: CAGAGGACCCGCACCACCCCAGGACCTGGCTGAACC...GGTGAGTTTGTACATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR CAA 90 bp | AGCCAGAGTACTTACCAGTTGATTTTCCTGACTCAGATGTGGTCCTaGGAGATGCAGGGTGATGTGGGAACAGCTCATGAGCGTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SQSTYQLIFLTQMWS*EMQGDVGTAHERFH Trigger: GTGAAAACGCTCATGAGCTGTTCCCACATCACCCTGCATCTCCAAGGACCACATCTGAGTCAGGAAAATCAACTGGTAAGTACTCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGAGGTGAGGCAAAGCAATaGCTTTTGGAGTGGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: REGNEAVYQDSSIDRLQRGEAKQ*LLEWTG Trigger: TCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACC...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | AGTCTAAGGTATACAGTGGGACCCTGTAAAAACAAACTCTCAATCCAGCCAGGAGAGATCAGGGAGGGGTaGGGCAAAGCAATGGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SLRYTVGPCKNKLSIQPGEIREG*GKAMAF Trigger: AAAAGCCATTGCTTTGCCTCACCCCTCCCTGATCTC...TCCTGGCTGGATTGAGAGTTTGTTTTTACAGGGTCCCACTGTATACCTTAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAAAGCTGTCTTACTTGATTAGTGTTTGTAACAATGGAGAGCGCTGCAGCCGGGCCAGAGGATCTTaGATTCAAGGCCAGTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RGKLSYLISVCNNGERCSRARGS*IQGQSK Trigger: CTTAGACTGGCCTTGAATTCAAGATCCTCTGGCCCG...GCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGAGAACTAGCCAGAGAATaGGAAGGAGCCAGAAGATCA | + |
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Preference number: 2 (lower is better) Translates to: REGNEAVYQDSSIDRLQRELARE*EGARRS Trigger: TGATCTTCTGGCTCCTTCTCATTCTCTGGCTAGTTC...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR GCA 90 bp | TATGTATGCAGAGAAACTGTGCCTCCTGAGAAGCTTCATAAAGTAATGAAACGTGCTGTCGCCTTCCAGTaGGCCTCCTCTCTCTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: YVCRETVPPEKLHKVMKRAVAFQ*ASSLFG Trigger: TCCGAAGAGAGAGGAGGCGCACTGGAAGGCGACAGC...ACGTTTCATTACTTTATGAAGCTTCTCAGGAGGCACAGTTTCTCTGCATACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATGTACAAACTCACCCGCTCGCCCCTTTGCTaGTTTGCTGTCTCCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PQWHFIGESTFINMYKLTRSPLC*FAVSWH Trigger: GTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAGCG...GGTGAGTTTGTACATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 90 bp | GACCCCTGGCTTGTGAGGCCTGGAAGTGAACCTACTCCTATCGTTTaGCTAAATGAACAAAACATCAAACTGCCTTCTGGGTCCTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: DPWLVRPGSEPTPIV*LNEQNIKLPSGSFL Trigger: TAGAAAGGACCCAGAAGGCAGTTTGATGTTTTGTTCATTTAGCAAAACGATAGGAGTAGGTTCACTTCCAGGCCTCACAAGCCAGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR TCA 90 bp | TATGTATGCAGAGAAACTGTGCCTCCTGAGAAGCTTCATAAAGTAATGAAACGTGGCTGGTGGATCTCTTaGGAGTTCAGGACCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YVCRETVPPEKLHKVMKRGWWIS*EFRTSL Trigger: CAGGCTGGTCCTGAACTCTCAAGAGATCCACCAGCC...ACGTTTCATTACTTTATGAAGCTTCTCAGGAGGCACAGTTTCTCTGCATACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTAAGGTATACAGTGGGACCCTGTAAAAACAAACTCTCAATCCAGCCAGGAGGCACAGGGCAGTTCTaGAAAGTGTCCTCCATTACT | + |
|
Preference number: 2 (lower is better) Translates to: SLRYTVGPCKNKLSIQPGGTGQF*KVSSIT Trigger: AGTAATGGAGGACACTTTGCAGAACTGCCCTGTGCC...TCCTGGCTGGATTGAGAGTTTGTTTTTACAGGGTCCCACTGTATACCTTAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGATGGCTGGAGGTGCAGTaGAGCATGAATGTAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: REGNEAVYQDSSIDRLQRWLEVQ*SMNVIK Trigger: TTTGATTACATTCATGCTGCACTGCACCTCCAGCCA...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTAAGGTATACAGTGGGACCCTGTAAAAACAAACTCTCAATCCAGCCAGGACCAGCAAGTCATCTGTaGACACGAAGACTCGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLRYTVGPCKNKLSIQPGPASHL*TRRLEN Trigger: ATTCTCGAGTCTTCGTGTCCACAGATGACTTGCTGG...TCCTGGCTGGATTGAGAGTTTGTTTTTACAGGGTCCCACTGTATACCTTAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CCA 90 bp | CCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATGTACAAACTCACCGGGACAAAGGGGATTTaGAAGTGGCTGGAGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PQWHFIGESTFINMYKLTGTKGI*KWLEVQ Trigger: CTGCACCTCCAGCCACTTCCAAATCCCCTTTGTCCC...GGTGAGTTTGTACATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTAAGGTATACAGTGGGACCCTGTAAAAACAAACTCTCAATCCAGCCAGGATTGTACAGTGAATGCTaGCTAACACAGAGCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLRYTVGPCKNKLSIQPGLYSEC*LTQSQE Trigger: CTCCTGGCTCTGTGTTAGCCAGCATTCACTGTACAA...TCCTGGCTGGATTGAGAGTTTGTTTTTACAGGGTCCCACTGTATACCTTAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTAAGGTATACAGTGGGACCCTGTAAAAACAAACTCTCAATCCAGCCAGGATTTGCGCTCAGCACTTaGAACTCTACTGCTTTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLRYTVGPCKNKLSIQPGFALST*NSTALA Trigger: AGCTAAAGCAGTAGAGTTGCAAGTGCTGAGCGCAAA...TCCTGGCTGGATTGAGAGTTTGTTTTTACAGGGTCCCACTGTATACCTTAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGCCTGTTTCTATTTGTGGTGTGGTTCAACCCTTTGTACATGCTTTTAATATGCGCTCGCCCCTTTaGTGGTTTGCTGTCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KKPVSICGVVQPFVHAFNMRSPL*WFAVSW Trigger: CCAGGAGACAGCAAACCAGCAAAGGGGCGAGCGCAT...ATTAAAAGCATGTACAAAGGGTTGAACCACACCACAAATAGAAACAGGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CCA 90 bp | AACCTAAACTCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTAGTCAATATTCTAATGTaGACACAAGGGCTCCCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: NLNSGTGEMDRVLTYQCLVNILM*TQGLPA Trigger: CGCTGGGAGCCCTTGTGTCCACATTAGAATATTGAC...TAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGAGTTTAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 90 bp | CGTAAATGCTTGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTACTaGATTAGTGTTTGTAACAATGGAGAGCGCTGCAGCCTGCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RKCLCAFKTRGKLSY*ISVCNNGERCSLPK Trigger: TTTTGGCAGGCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACAAGCATTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGCCTGTTTCTATTTGTGGTGTGGTTCAACCCTTTGTACATGCTTTTAATTTGATCCCAGCACCCTaGAAGTGGAGGCTGGTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: KKPVSICGVVQPFVHAFNLIPAP*KWRLVD Trigger: ATCCACCAGCCTCCACTTCCAGGGTGCTGGGATCAA...ATTAAAAGCATGTACAAAGGGTTGAACCACACCACAAATAGAAACAGGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGCCTGTTTCTATTTGTGGTGTGGTTCAACCCTTTGTACATGCTTTTAATCAAAGCAATGGCTTTTaGAGTGGACAGGACAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: KKPVSICGVVQPFVHAFNQSNGF*SGQDRT Trigger: GGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTG...ATTAAAAGCATGTACAAAGGGTTGAACCACACCACAAATAGAAACAGGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 90 bp | ACTGTGCCTCCTGAGAAGCTTCATAAAGTAATGAAACGTAAATGCTaGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTACTTGATTAGT | + |
|
Preference number: 2 (lower is better) Translates to: TVPPEKLHKVMKRKC*CAFKTRGKLSYLIS Trigger: ACTAATCAAGTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACAAGCATTTACGTTTCATTACTTTATGAAGCTTCTCAGGAGGCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | TTCTCAGCCCTCGATGTGAGGCTCGGGCCCTGGGCCTaGTCCACTTCCATGTGCTCCTCCTGCACACGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FSALDVRLGPWA*STSMCSSCTRG Trigger: GCCACGTGTGCAGGAGGAGCACATGGAAGTGGAGCAGGCCCAGGGCCCGAGCCTCACATCGAGGGCTGAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | ACAGGCTCACGGCCTCCTGTTTCTCAGCCCTCGATGTaGGGCTCGGGCCCTGGGCCTGCTCCACTTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TGSRPPVSQPSM*GSGPGPAPLPC Trigger: ACATGGAAGTGGAGCAGGCCCAGGGCCCGAGCCTCACATCGAGGGCTGAGAAACAGGAGGCCGTGAGCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | GGGCCAAGGGCTCCGTCAATGCGCTCGCCCCTTTGCTaGTTTGCTGTCTCCTGGCACAGGGCAGTTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GPRAPSMRSPLC*FAVSWHRAVLQ Trigger: TTGCAGAACTGCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAGCGCATTGACGGAGCCCTTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | CAGAGCCAGGAGAAACAGGGAGGTGGCGAACGCCTTTaGTCCCAGCACCCTGGAAGTGGAGGCTGGTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: QSQEKQGGGERL*SQHPGSGGWWI Trigger: GATCCACCAGCCTCCACTTCCAGGGTGCTGGGATCAAAGGCGTTCGCCACCTCCCTGTTTCTCCTGGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | GCTGTCGCCTTCCAGTGCGCCTCCTCTCTCTTCGGATaGTGGTGTCACAGGGATCAGATCTGGGCCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: AVAFQCASSLFG*WCHRDQIWAKQ Trigger: CTGTTTGGCCCAGATCTGATCCCTGTGACACCAGCATCCGAAGAGAGAGGAGGCGCACTGGAAGGCGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | AAGGGCTCCGTCAATGCGCTCGCCCCTTTGCTGGTTTaGTGTCTCCTGGCACAGGGCAGTTCTGCAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KGSVNALAPLLV*CLLAQGSSAKC Trigger: ACACTTTGCAGAACTGCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAGCGCATTGACGGAGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | AGCATGCGGGTGATGGCCTCCTCCACCCGCGCTAGGTaGTCCTCTTCCAGCTCAATCCAGGAGTTTATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SMRVMASSTRAR*SSSSSIQEFIL Trigger: CAGTATAAACTCCTGGATTGAGCTGGAAGAGGACCACCTAGCGCGGGTGGAGGAGGCCATCACCCGCATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | ACAGGGAGGTGGCGAACGCCTTTGATCCCAGCACCCTaGAAGTGGAGGCTGGTGGATCTCTTGAGAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGRWRTPLIPAP*KWRLVDLLRVQ Trigger: CTGAACTCTCAAGAGATCCACCAGCCTCCACTTCCAGGGTGCTGGGATCAAAGGCGTTCGCCACCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | ATGCTGGCTAACACAGAGCCAGGAGAAACAGGGAGGTaGCGAACGCCTTTGATCCCAGCACCCTGGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MLANTEPGETGR*RTPLIPAPWKW Trigger: CCACTTCCAGGGTGCTGGGATCAAAGGCGTTCGCCACCTCCCTGTTTCTCCTGGCTCTGTGTTAGCCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | TCTGAACAGGACGCTCAAGCGATGCCGAACGAACGCTaGGGCCATTCTGTAGCCATGCCCATCTACCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SEQDAQAMPNER*GHSVAMPIYPT Trigger: AGTGGGGTAGATGGGCATGGCTACAGAATGGCCCCAGCGTTCGTTCGGCATCGCTTGAGCGTCCTGTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | TCCCAGCACCCTGGAAGTGGAGGCTGGTGGATCTCTTaGGAGTTCAGGACCAGCCTGGTCTATACTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQHPGSGGWWIS*EFRTSLVYTES Trigger: GCTCTCAGTATAGACCAGGCTGGTCCTGAACTCTCAAGAGATCCACCAGCCTCCACTTCCAGGGTGCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | CATGTGCTCCTCCTGCACACGTGGCTCCGCCCCGTTTaGGCTCAGCACTTGCAACTCTACTGCTTTAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HVLLLHTWLRPV*AQHLQLYCFSF Trigger: AAAGCTAAAGCAGTAGAGTTGCAAGTGCTGAGCGCAAACGGGGCGGAGCCACGTGTGCAGGAGGAGCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | TCTCTCTTCGGATGCTGGTGTCACAGGGATCAGATCTaGGCCAAACAGGCTCACGGCCTCCTGTTTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLFGCWCHRDQI*AKQAHGLLFLS Trigger: GCTGAGAAACAGGAGGCCGTGAGCCTGTTTGGCCCAGATCTGATCCCTGTGACACCAGCATCCGAAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | ACAGGTCAGAGATCAGGGAGGGGTGAGGCAAAGCAATaGCTTTTGGAGTGGACAGGACAGAACCGGTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGQRSGRGEAKQ*LLEWTGQNRFA Trigger: GGCAAACCGGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATCTCTGACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | AGAGATCAGGGAGGGGTGAGGCAAAGCAATGGCTTTTaGAGTGGACAGGACAGAACCGGTTTGCCTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RDQGGVRQSNGF*SGQDRTGLPVN Trigger: GTTCACAGGCAAACCGGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | CTTCCTTACCCAAGGAGCACTTTGTACAGTGAATGCTaGCTAACACAGAGCCAGGAGAAACAGGGAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LPYPRSTLYSEC*LTQSQEKQGGG Trigger: GCCACCTCCCTGTTTCTCCTGGCTCTGTGTTAGCCAGCATTCACTGTACAAAGTGCTCCTTGGGTAAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | AACCTAAACTCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTAGTGGCTCCGCCCCGTTaGCGCTCAGCACTTGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: NLNSGTGEMDRVLTYQCLVAPPR*RSALAT Trigger: AGTTGCAAGTGCTGAGCGCAAACGGGGCGGAGCCAC...TAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGAGTTTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | GATCAGGGAGGGGTGAGGCAAAGCAATGGCTTTTGGAGTGGACAGGACAGAACCATCACAGCTTTTTCCTaGTATCAAAAGCTGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DQGGVRQSNGFWSGQDRTITAFS*YQKLGH Trigger: GTGGCCCAGCTTTTGATACAAGGAAAAAGCTGTGAT...GGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | AAACAAACTCTCAATCCAGCCAGGACCCCTGGCTTGTaGGGCCTGGAAGTGAACCTACTCCTATCGTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KQTLNPARTPGL*GLEVNLLLSFC Trigger: GCAAAACGATAGGAGTAGGTTCACTTCCAGGCCTCACAAGCCAGGGGTCCTGGCTGGATTGAGAGTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | AGAAAGACTTCCTGCAGAAGACCGTCCCAGCTTCTCTaGGCCCAGTCGACACTGAGTCCATTCTGTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: RKTSCRRPSQLL*AQSTLSPFCNN Trigger: GTTGTTACAGAATGGACTCAGTGTCGACTGGGCTCAGAGAAGCTGGGACGGTCTTCTGCAGGAAGTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | GAGTCCACCATGCCTCCTGAACACCACGTGGGTATGTaGGCACTACTGACTTGTCCTTCAGTATTGGACGAT | + |
|
Preference number: 3 (lower is better) Translates to: ESTMPPEHHVGM*ALLTCPSVLDD Trigger: ATCGTCCAATACTGAAGGACAAGTCAGTAGTGCTCACATACCCACGTGGTGTTCAGGAGGCATGGTGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | GAGTTCAGGACCAGCCTGGTCTATACTGAGAGCTCCTaGAAAGCCAGAGAGAGCTACATAGTTGGATCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EFRTSLVYTESS*KARESYIVGSS Trigger: ACTGGATCCAACTATGTAGCTCTCTCTGGCTTTCCAGGAGCTCTCAGTATAGACCAGGCTGGTCCTGAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGCCTAGGCGTAGGCCTGGGTTAGCAGACCGAGGCAGTGAACCTCTAAGACCTACTCCTATCGTTTaGCTAAATGAACAAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: SRPRRRPGLADRGSEPLRPTPIV*LNEQNI Trigger: GATGTTTTGTTCATTTAGCAAAACGATAGGAGTAGG...TCTTAGAGGTTCACTGCCTCGGTCTGCTAACCCAGGCCTACGCCTAGGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | AAAAGGCACAAACAGCACTGTTCAAGTAGCAGCTGTTaGCCTCGTGAGATGTCTCCTCAACCTCAGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KRHKQHCSSSSC*PREMSPQPQWG Trigger: ACCCCACTGAGGTTGAGGAGACATCTCACGAGGTCAACAGCTGCTACTTGAACAGTGCTGTTTGTGCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | GATGATCCTTCCTTACCCAAGGAGCACTTTGTACAGTaGATGCTGGCTAACACAGAGCCAGGAGAAACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DDPSLPKEHFVQ*MLANTEPGETG Trigger: CCCTGTTTCTCCTGGCTCTGTGTTAGCCAGCATTCACTGTACAAAGTGCTCCTTGGGTAAGGAAGGATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | ATCCTTCCTTACCCAAGGAGCACTTTGTACAGTGAATaGTGGCTAACACAGAGCCAGGAGAAACAGGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ILPYPRSTLYSE*WLTQSQEKQGG Trigger: ACCTCCCTGTTTCTCCTGGCTCTGTGTTAGCCAGCATTCACTGTACAAAGTGCTCCTTGGGTAAGGAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | ATCTACCCCACTTCAGAGGACCTCAGCCTTTCAGACTaGTTTGCAGCCGAGTCTTACCTAACAAACCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IYPTSEDLSLSD*FAAESYLTNQD Trigger: GTCTTGGTTTGTTAGGTAAGACTCGGCTGCAAAGCAGTCTGAAAGGCTGAGGTCCTCTGAAGTGGGGTAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGAGTTTGCGCTCAGCACTaGCAACTCTACTGCTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: REGNEAVYQDSSIDRLQRVCAQH*QLYCFS Trigger: GCTAAAGCAGTAGAGTTGCAAGTGCTGAGCGCAAAC...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | TATGTATGCAGAGAAACTGTGCCTCCTGAGAAGCTTCATAAAGTAATGAAACGTCCTGTAATCCATCGCTaGGGGAGGCGGGCCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YVCRETVPPEKLHKVMKRPVIHR*GRRARG Trigger: TCCTCTGGCCCGCCTCCCCAAGCGATGGATTACAGG...ACGTTTCATTACTTTATGAAGCTTCTCAGGAGGCACAGTTTCTCTGCATACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | CAGAGTACTTACCAGTTGATTTTCCTGACTCAGATGTaGTCCTTGGAGATGCAGGGTGATGTGGGAACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSTYQLIFLTQM*SLEMQGDVGTA Trigger: AGCTGTTCCCACATCACCCTGCATCTCCAAGGACCACATCTGAGTCAGGAAAATCAACTGGTAAGTACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | CCCGTGTTTGGTTCTTATCACCCACAGGGTAGTTTATaGTCATCCGTAACTAAAGATCCAGGGAGCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: PVFGSYHPQGSL*SSVTKDPGSQC Trigger: GCATTGGCTCCCTGGATCTTTAGTTACGGATGACCATAAACTACCCTGTGGGTGATAAGAACCAAACACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATGTACAAACTCACCAGGCTGGTGGATCTCTaGAGAGTTCAGGACCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PQWHFIGESTFINMYKLTRLVDL*RVQDQP Trigger: AGGCTGGTCCTGAACTCTCAAGAGATCCACCAGCCT...GGTGAGTTTGTACATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | ACAAAACATCAAACTGCCTTCTGGGTCCTTTCTAGATaGTCCTTCCTTACCCAAGGAGCACTTTGTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TKHQTAFWVLSR*SFLTQGALCTV Trigger: CACTGTACAAAGTGCTCCTTGGGTAAGGAAGGATCATCTAGAAAGGACCCAGAAGGCAGTTTGATGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | TGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTACTTaGTTAGTGTTTGTAACAATGGAGAGCGCTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CVPLKPEESCLT*LVFVTMESAAA Trigger: GGCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | TCTTACTTGATTAGTGTTTGTAACAATGGAGAGCGCTaGAGCCTGCCAAAATTGTCTGAACAGGACGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SYLISVCNNGER*SLPKLSEQDAQ Trigger: TTGAGCGTCCTGTTCAGACAATTTTGGCAGGCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTAAGAACACTGCAGAGTACTTACCAGTaGATTTTCCTGACTCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SGTGEMDRVLTYQCLRTLQSTYQ*IFLTQM Trigger: CATCTGAGTCAGGAAAATCAACTGGTAAGTACTCTG...CAGTGTTCTTAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CCA 72 bp | AAAGAGAGAAAATTTGGGACAAAGGGGATTTGGAAGTaGCTGGAGGTGCAGTGCAGCATGAATGTAATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KERKFGTKGIWK*LEVQCSMNVIK Trigger: TTTGATTACATTCATGCTGCACTGCACCTCCAGCCACTTCCAAATCCCCTTTGTCCCAAATTTTCTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR GCA 72 bp | CCTCCTGAGAAGCTTCATAAAGTAATGAAACGTAAATaGTTGTGTGCCTTTAAAACCAGAGGAAAGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPEKLHKVMKRK*LCAFKTRGKLS Trigger: AGACAGCTTTCCTCTGGTTTTAAAGGCACACAAGCATTTACGTTTCATTACTTTATGAAGCTTCTCAGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | GTGGTTCAACCCTTTGTACATGCTTTTAATCCCTTTTaGTGGTGTATAGACACGTCCTTAGTACTTACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VVQPFVHAFNPF*WCIDTSLVLTF Trigger: AAAGGTAAGTACTAAGGACGTGTCTATACACCATCAAAAGGGATTAAAAGCATGTACAAAGGGTTGAACCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR TCA 72 bp | TTTACAGACATTGTTGCAGGATATTTAATCACACCATaGACGAACCCCCATCGAGATTTGAGTTATAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: FTDIVAGYLITP*TNPHRDLSYKL Trigger: CAGTTTATAACTCAAATCTCGATGGGGGTTCGTTCATGGTGTGATTAAATATCCTGCAACAATGTCTGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | CTCGGGGCCAAGGGCTCCGTCAATGCGCTCGCCCCTTaGCTGGTTTGCTGTCTCCTGGCACAGGGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGAKGSVNALAP*LVCCLLAQGSS Trigger: AGAACTGCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAGCGCATTGACGGAGCCCTTGGCCCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | CAAGGGCTCCGTCAATGCGCTCGCCCCTTTGCTGGTTaGCTGTCTCCTGGCACAGGGCAGTTCTGCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLRQCARPFAG*LSPGTGQFCKV Trigger: CACTTTGCAGAACTGCCCTGTGCCAGGAGACAGCAAACCAGCAAAGGGGCGAGCGCATTGACGGAGCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | CGGGTGATGGCCTCCTCCACCCGCGCTAGGTGGTCCTCTTCCAGCTCAATCCAGCCAGAGATACTAGACTaGTCACAGTTCCAGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVMASSTRARWSSSSSIQPEILD*SQFQVK Trigger: TTTGACCTGGAACTGTGACCAGTCTAGTATCTCTGG...CTGGATTGAGCTGGAAGAGGACCACCTAGCGCGGGTGGAGGAGGCCATCACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR TCA 90 bp | GATCAGGGAGGGGTGAGGCAAAGCAATGGCTTTTGGAGTGGACAGGACAGAACCGATGCCATCTTTTCCTaGTCCAGGCTTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DQGGVRQSNGFWSGQDRTDAIFS*SRLPGT Trigger: GGTGCCAGGAAGCCTGGATCAGGAAAAGATGGCATC...GGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | CAGAGATCAGGGAGGGGTGAGGCAAAGCAATGGCTTTaGGAGTGGACAGGACAGAACCGGTTTGCCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRSGRGEAKQWL*EWTGQNRFACE Trigger: TTCACAGGCAAACCGGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | CTGCACACGTGGCTCCGCCCCGTTTGCGCTCAGCACTaGCAACTCTACTGCTTTAGCTTTTTCACAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LHTWLRPVCAQH*QLYCFSFFTMI Trigger: GATCATTGTGAAAAAGCTAAAGCAGTAGAGTTGCAAGTGCTGAGCGCAAACGGGGCGGAGCCACGTGTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCCTAGGCGTAGGCCTGGGTTAGCAGACCGAGGCAGTGAACCTCTAAGACCTGGAATACTAAGTTaGAACCATAGGAGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRPRRRPGLADRGSEPLRPGILS*NHRSPD Trigger: ATCTGGACTCCTATGGTTGCAACTTAGTATTCCAGG...TCTTAGAGGTTCACTGCCTCGGTCTGCTAACCCAGGCCTACGCCTAGGCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | TGGACACAAGGGCTCCCAGCGCTAGCTAAGGAGCTATaGATGGCTGCGTCCAGAAGGAAAGTTGAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTQGLPALAKEL*MAASRRKVEFS Trigger: AGAAAACTCAACTTTCCTTCTGGACGCAGCCATCAATAGCTCCTTAGCTAGCGCTGGGAGCCCTTGTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | GTTTGTAACAATGGAGAGCGCTGCAGCCTGCCAAAATaGTCTGAACAGGACGCTCAAGCGATGCCGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCNNGERCSLPK*SEQDAQAMPNE Trigger: TTCGTTCGGCATCGCTTGAGCGTCCTGTTCAGACAATTTTGGCAGGCTGCAGCGCTCTCCATTGTTACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | GATCAGGGAGGGGTGAGGCAAAGCAATGGCTTTTGGAGTGGACAGGACAGAACCCTCTTTCGCTTTCTCTaGTGTAAAAGGTTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQGGVRQSNGFWSGQDRTLFRFL*CKRFDR Trigger: CCTGTCAAACCTTTTACACCAGAGAAAGCGAAAGAG...GGTTCTGTCCTGTCCACTCCAAAAGCCATTGCTTTGCCTCACCCCTCCCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | AACCTAAACTCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTAAGATGGCAGGGAGTGTaGGCTCCAAAGGACCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: NLNSGTGEMDRVLTYQCLRWQGV*APKDPI Trigger: GATCGGGTCCTTTGGAGCCCACACTCCCTGCCATCT...TAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGAGTTTAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | ACTTACCAGTTGATTTTCCTGACTCAGATGTGGTCCTaGGAGATGCAGGGTGATGTGGGAACAGCTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TYQLIFLTQMWS*EMQGDVGTAHE Trigger: CTCATGAGCTGTTCCCACATCACCCTGCATCTCCAAGGACCACATCTGAGTCAGGAAAATCAACTGGTAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | AGCCAATGCCCCCTTCTGACCTGTGAGGGAACTGCACACATCAATTCATGCAGGTCTCTTCCTTGTACCTaGAATACTAAGTTGCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SQCPLLTCEGTAHINSCRSLPCT*NTKLQP Trigger: TGGTTGCAACTTAGTATTCCAGGTACAAGGAAGAGA...CCTGCATGAATTGATGTGTGCAGTTCCCTCACAGGTCAGAAGGGGGCATTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR TCA 90 bp | AACCTAAACTCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTACGCAGTCCAGTGTCGTaGTGGCCAATCGAAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLNSGTGEMDRVLTYQCLRSPVS*WPIENH Trigger: ATGGTTTTCGATTGGCCATCACGACACTGGACTGCG...TAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGAGTTTAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGGACAGGAGAGATGGACAGAGTGCTTACTTATCAGTGTTTAAGAACACTGCTGATCCAGGCTTCCTaGCACCTGTCAACATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGTGEMDRVLTYQCLRTLLIQAS*HLSTSK Trigger: TTTGGATGTTGACAGGTGCCAGGAAGCCTGGATCAG...CAGTGTTCTTAAACACTGATAAGTAAGCACTCTGTCCATCTCTCCTGTCCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | CTTGTGAGGCCTGGAAGTGAACCTACTCCTATCGTTTaGCTAAATGAACAAAACATCAAACTGCCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVRPGSEPTPIV*LNEQNIKLPSG Trigger: CCCAGAAGGCAGTTTGATGTTTTGTTCATTTAGCAAAACGATAGGAGTAGGTTCACTTCCAGGCCTCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | TTGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTACTaGATTAGTGTTTGTAACAATGGAGAGCGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCAFKTRGKLSY*ISVCNNGERCS Trigger: GCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGATTCATAATCTTTGAATaGTCCAGAGATACTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: REGNEAVYQDSSIDRLQRFIIFE*SRDTRL Trigger: CAGTCTAGTATCTCTGGACCATTCAAAGATTATGAA...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAAGCTGTCTTACTTGATTAGTGTTTGTAACAATGGAGAGCGCTGCAGCCAGAAGATTGCAGGCTaGTGTAAAGACATTATAATC | + |
|
Preference number: 4 (lower is better) Translates to: RGKLSYLISVCNNGERCSQKIAG*CKDIII Trigger: GATTATAATGTCTTTACAGCAGCCTGCAATCTTCTG...GCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCCTGTTTCTATTTGTGGTGTGGTTCAACCCTTTGTACATGCTTTTAATGACCACACCACCTCCTaGAAAACATCTGTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKPVSICGVVQPFVHAFNDHTTS*KTSVLS Trigger: GGACAAGACAGATGTTTTCCAGGAGGTGGTGTGGTC...ATTAAAAGCATGTACAAAGGGTTGAACCACACCACAAATAGAAACAGGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | CCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATGTACAAACTCACCCTTCGTAAGGAATTCTaGTTGGATAAAGGAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PQWHFIGESTFINMYKLTLRKEF*LDKGKA Trigger: CGCCTTTCCTTTATCCAACCAGAATTCCTTACGAAG...GGTGAGTTTGTACATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CCA 90 bp | TATGTATGCAGAGAAACTGTGCCTCCTGAGAAGCTTCATAAAGTAATGAAACGTGTAAGGAATTCTGGTTaGATAAAGGAAAGGCGTATC | + |
|
Preference number: 4 (lower is better) Translates to: YVCRETVPPEKLHKVMKRVRNSG*IKERRI Trigger: GATACGCCTTTCCTTTATCCAACCAGAATTCCTTAC...ACGTTTCATTACTTTATGAAGCTTCTCAGGAGGCACAGTTTCTCTGCATACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| 3UTR CAA 72 bp | CCTGAGAAGCTTCATAAAGTAATGAAACGTAAATGCTaGTGTGCCTTTAAAACCAGAGGAAAGCTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PEKLHKVMKRKC*CAFKTRGKLSY Trigger: GTAAGACAGCTTTCCTCTGGTTTTAAAGGCACACAAGCATTTACGTTTCATTACTTTATGAAGCTTCTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS TCA 90 bp | CGGTTTCATACTGAGGAACTGTGCCTGTGCCTCTCAGGCCCATTCTaGACCGTATCTGCTTGCCCTCCAAGACCTTCGAAAGGTGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFHTEELCLCLSGPF*TVSACPPRPSKGVS Trigger: CGAAACACCTTTCGAAGGTCTTGGAGGGCAAGCAGATACGGTTCAGAATGGGCCTGAGAGGCACAGGCACAGTTCCTCAGTATGAAACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS TCA 90 bp | CTTGCCCTCCAAGACCTTCGAAAGGTGTTTCGCAGTCCAGTGTCGTaGTGGCCAATCGAAAACCATGTTACAGAAGATTGCAGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LALQDLRKVFRSPVS*WPIENHVTEDCRLL Trigger: CAGCAGCCTGCAATCTTCTGTAACATGGTTTTCGATTGGCCATCACGACACTGGACTGCGAAACACCTTTCGAAGGTCTTGGAGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS GCA 90 bp | GAAAGAGATGCCATCTTTTCCTTCCTTGTACCTGGAATACTAAGTTaGAACCATAGGAGTCCAGATGGCAGGGAGTGTGGGCTCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERDAIFSFLVPGILS*NHRSPDGRECGLQR Trigger: CCTTTGGAGCCCACACTCCCTGCCATCTGGACTCCTATGGTTGCAACTTAGTATTCCAGGTACAAGGAAGGAAAAGATGGCATCTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231579.2 |
||
| CDS GCA 90 bp | TCAACAAACTTCTCTGTTCTCTTCCTTGTACCTGGAATACTAAGTTaGAACCATAGGAGTCCAGATGGCAGGGAGTGTGGGCTCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: STNFSVLFLVPGILS*NHRSPDGRECGLQR Trigger: CCTTTGGAGCCCACACTCCCTGCCATCTGGACTCCTATGGTTGCAACTTAGTATTCCAGGTACAAGGAAGAGAACAGAGAAGTTTGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGCTGTCTTACTTGATTAGTGTTTGTAACAATGGAGAGCGCTGCAGCTCTGGTGTAAAAGGTTaGACAGGTTCACCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKLSYLISVCNNGERCSSGVKG*TGSPSS Trigger: GGAGGAAGGTGAACCTGTCAAACCTTTTACACCAGA...GCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGGGAATGAGGCAGTTTACCAGGACAGTAGTATAGACAGGTTGCAGAGATCAGGGTTGACAACATaGATTTTACTGAACACACTA | + |
|
Preference number: 5 (lower is better) Translates to: REGNEAVYQDSSIDRLQRSGLTT*ILLNTL Trigger: TAGTGTGTTCAGTAAAATCAATGTTGTCAACCCTGA...TCTCTGCAACCTGTCTATACTACTGTCCTGGTAAACTGCCTCATTCCCCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGCTGTCTTACTTGATTAGTGTTTGTAACAATGGAGAGCGCTGCAGCTGGAAAACATCTGTCTaGTCCTCAAACAGAGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: RGKLSYLISVCNNGERCSWKTSV*SSNRVT Trigger: TGTTACTCTGTTTGAGGACAAGACAGATGTTTTCCA...GCTGCAGCGCTCTCCATTGTTACAAACACTAATCAAGTAAGACAGCTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS-3UTR CAA 90 bp | CCACAGTGGCATTTTATTGGGGAAAGCACATTTATAAACATGTACAAACTCACCCCATGTTACAGAAGATaGCAGGCTGCTGTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PQWHFIGESTFINMYKLTPCYRR*QAAVKT Trigger: TGTCTTTACAGCAGCCTGCAATCTTCTGTAACATGG...GGTGAGTTTGTACATGTTTATAAATGTGCTTTCCCCAATAAAATGCCACTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS CCA 90 bp | ATAGTCAGCGTAAGCCCAGAATTTAGAATGTTCATAATCTTTGAATaGTCCAGAGATACTAGACTGGTCACAGTTCCAGGTCAAAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IVSVSPEFRMFIIFE*SRDTRLVTVPGQKL Trigger: GAGTTTTTGACCTGGAACTGTGACCAGTCTAGTATCTCTGGACCATTCAAAGATTATGAACATTCTAAATTCTGGGCTTACGCTGACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCCTGTTTCTATTTGTGGTGTGGTTCAACCCTTTGTACATGCTTTTAATCGTAAGGAATTCTGGTaGGATAAAGGAAAGGCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KKPVSICGVVQPFVHAFNRKEFW*DKGKAY Trigger: ATACGCCTTTCCTTTATCCAACCAGAATTCCTTACG...ATTAAAAGCATGTACAAAGGGTTGAACCACACCACAAATAGAAACAGGCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023555.6 |
||
| CDS CAA 90 bp | GGAACTGTGCCTGTGCCTCTCAGGCCCATTCTGAACCGTATCTGCTaGCCCTCCAAGACCTTCGAAAGGTGTTTCGCAGTCCAGTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GTVPVPLRPILNRIC*PSKTFERCFAVQCR Trigger: ACGACACTGGACTGCGAAACACCTTTCGAAGGTCTTGGAGGGCAAGCAGATACGGTTCAGAATGGGCCTGAGAGGCACAGGCACAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS GCA 72 bp | GTGCCTGTGCCTCTCAGGCCCATTCTGAACCGTATCTaGTTGCCCTCCAAGACCTTCGAAAGGTGTTTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: VPVPLRPILNRI*LPSKTFERCFA Trigger: TGCGAAACACCTTTCGAAGGTCTTGGAGGGCAAGCAGATACGGTTCAGAATGGGCCTGAGAGGCACAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS CAA 72 bp | CCTGTGCCTCTCAGGCCCATTCTGAACCGTATCTGCTaGCCCTCCAAGACCTTCGAAAGGTGTTTCGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PVPLRPILNRIC*PSKTFERCFAV Trigger: GACTGCGAAACACCTTTCGAAGGTCTTGGAGGGCAAGCAGATACGGTTCAGAATGGGCCTGAGAGGCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS TCA 72 bp | ACTGAGGAACTGTGCCTGTGCCTCTCAGGCCCATTCTaGACCGTATCTGCTTGCCCTCCAAGACCTTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TEELCLCLSGPF*TVSACPPRPSK Trigger: TTTCGAAGGTCTTGGAGGGCAAGCAGATACGGTTCAGAATGGGCCTGAGAGGCACAGGCACAGTTCCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS CAA 90 bp | GCAGGGAGTGTGGGCTCCAAAGGACCCGATCCACAGTGTACTTTCTaGTCCATTTCTTCCAGGAAACCCAAAGTCAGACCACACCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGSVGSKGPDPQCTF*SISSRKPKVRPHHL Trigger: GAGGTGGTGTGGTCTGACTTTGGGTTTCCTGGAAGAAATGGACAAGAAAGTACACTGTGGATCGGGTCCTTTGGAGCCCACACTCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS CCA 72 bp | CCTGGGCTCAACGTGACCATATGTCTTCGAGCTTTCTaGAACTGGGGGAAACACTTCAAATCAGGGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PGLNVTICLRAF*NWGKHFKSGLT Trigger: TGTCAACCCTGATTTGAAGTGTTTCCCCCAGTTCCAGAAAGCTCGAAGACATATGGTCACGTTGAGCCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231579.2 |
||
| CDS CAA 72 bp | GTGGGCTCCAAAGGACCCGATCCACAGTGTACTTTCTaGTCCATTTCTTCCAGGAAACCCAAAGTCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: VGSKGPDPQCTF*SISSRKPKVRP Trigger: TGGTCTGACTTTGGGTTTCCTGGAAGAAATGGACAAGAAAGTACACTGTGGATCGGGTCCTTTGGAGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS TCA 72 bp | CAAGACCTTCGAAAGGTGTTTCGCAGTCCAGTGTCGTaGTGGCCAATCGAAAACCATGTTACAGAAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: QDLRKVFRSPVS*WPIENHVTEDC Trigger: GCAATCTTCTGTAACATGGTTTTCGATTGGCCATCACGACACTGGACTGCGAAACACCTTTCGAAGGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||
| CDS CCA 72 bp | GTAAGCCCAGAATTTAGAATGTTCATAATCTTTGAATaGTCCAGAGATACTAGACTGGTCACAGTTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSPEFRMFIIFE*SRDTRLVTVPG Trigger: ACCTGGAACTGTGACCAGTCTAGTATCTCTGGACCATTCAAAGATTATGAACATTCTAAATTCTGGGCTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023555.6 ENSMUST00000231579.2 |
||