Pregenerated sensors for HSPB8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041548Ensembl transcript IDs: ENSMUST00000036991.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTCAAACACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTaGCCTTTGCTTGGTTCCTTGCGGAGCTGCTCCAAGACAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PSNTHTMPLACVQAV*PLLGSLRSCSKTAL Trigger: GAGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR GCA 90 bp | GCCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCTaGTCCAAGACAGCTCTCTGTAAAAATGTGACTTGGACACAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ACVQAVWPLLGSLRS*SKTALCKNVTWTQG Trigger: CCCCTGTGTCCAAGTCACATTTTTACAGAGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CCA 90 bp | TCCCATCAACCAAGCCACGTAGAAGGAGGGTCCAGAGCAGGGATCTaGGTGATGGGAAGGTCCCCAGAGAAAAGCAACTCTTGCATTAAC | + |
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Preference number: 1 (lower is better) Translates to: SHQPSHVEGGSRAGI*VMGRSPEKSNSCIN Trigger: GTTAATGCAAGAGTTGCTTTTCTCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGGCTTGGTTGATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR TCA 90 bp | TTGTTTTGCAACTGTAGACTGCGAGACGTCTTCACCCAGATAAGATaGAGAAAAACCTCCCAATCCTTTGACCTAACGCAACCAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: LFCNCRLRDVFTQIR*RKTSQSFDLTQPSK Trigger: CTTGCTTGGTTGCGTTAGGTCAAAGGATTGGGAGGTTTTTCTTCATCTTATCTGGGTGAAGACGTCTCGCAGTCTACAGTTGCAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR CCA 90 bp | CCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGAGAGAGTCCCTGGGGCTaGGGATGGGAGCGAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRRRRVQSRDLGDGKVPRESPWG*GWERRR Trigger: CCTTCTTCGCTCCCATCCCCAGCCCCAGGGACTCTC...TCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CAA 90 bp | ATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTaGCGGAGCTGCTCCAAGACAGCTCTCTGTAAAAATGTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: MPLACVQAVWPLLGS*RSCSKTALCKNVTW Trigger: CCAAGTCACATTTTTACAGAGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CAA 90 bp | AACACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTaGCTTGGTTCCTTGCGGAGCTGCTCCAAGACAGCTCTCTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: NTHTMPLACVQAVWP*LGSLRSCSKTALCK Trigger: TTTACAGAGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR TCA 90 bp | CCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGATTCACCCAGATAAGATaGAGAAAAACCTCCCAATCC | + |
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Preference number: 2 (lower is better) Translates to: PRRRRVQSRDLGDGKVPRFTQIR*RKTSQS Trigger: GGATTGGGAGGTTTTTCTTCATCTTATCTGGGTGAA...TCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAAACACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGAGAAACACACTGAGGTaGGCCAATGAGTCCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: PSNTHTMPLACVQAVWPLRNTLR*ANESHQ Trigger: TTGATGGGACTCATTGGCTCACCTCAGTGTGTTTCT...CAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR TCA 90 bp | ACACACACATCCTCCCCACCCCTCAAACACACACACAATGCCACTAGCCTGCGTCCATCCCCCAACATCTaGGTTGCCTTAAATCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: THTSSPPLKHTHNATSLRPSPNI*VALNLS Trigger: ACTCAGATTTAAGGCAACTCAGATGTTGGGGGATGG...ACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGGGTGGGGAGGATGTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR GCA 90 bp | ACAACAGCACAATTCACACAACAAAGACACACACATCCTCCCCACCCCTCAAACACAATGCCACTAGCCTaGGTGCAGGCTGTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TTAQFTQQRHTHPPHPSNTMPLA*VQAVWP Trigger: AGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGT...GTTTGAGGGGTGGGGAGGATGTGTGTGTCTTTGTTGTGTGAATTGTGCTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCTGCTCCAAGACAGCTCTAGGATAAATCCCATATaGGGATATAAGACCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: AGCLAFAWFLAELLQDSSRINPI*GYKTCP Trigger: TGGGCAGGTCTTATATCCCCATATGGGATTTATCCT...AGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR GCA 90 bp | ACAACAGCACAATTCACACAACAAAGACACACACATCCTCCCCACCCCTCAAACGCAAGGCTGACCCATTaGGTCACCCTGTGGAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: TTAQFTQQRHTHPPHPSNARLTH*VTLWRN Trigger: ATTTCTCCACAGGGTGACGCAATGGGTCAGCCTTGC...GTTTGAGGGGTGGGGAGGATGTGTGTGTCTTTGTTGTGTGAATTGTGCTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGACCTTAGCCAGAGAATTAACTGAGGGGCTCCCAGAGTTCTTGGTGGTGCATTGCGTCACCCTGTaGAGAAATCTATTACTACAT | + |
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Preference number: 2 (lower is better) Translates to: RGTLARELTEGLPEFLVVHCVTL*RNLLLH Trigger: ATGTAGTAATAGATTTCTCCACAGGGTGACGCAATG...CACCACCAAGAACTCTGGGAGCCCCTCAGTTAATTCTCTGGCTAAGGTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR CAA 90 bp | ATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCAGCAAGGCTGACCCATaGCGTCACCCTGTGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: MPLACVQAVWPLLGSLRSSKADP*RHPVEK Trigger: TTTCTCCACAGGGTGACGCAATGGGTCAGCCTTGCT...GCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CCA 72 bp | ACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTaGCCTTTGCTTGGTTCCTTGCGGAGCTGCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: THTMPLACVQAV*PLLGSLRSCSK Trigger: CTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR GCA 72 bp | CCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTTaGGGAGCTGCTCCAAGACAGCTCTCTGTAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: PACRLSGLCLVP*GAAPRQLSVKM Trigger: CATTTTTACAGAGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CCA 72 bp | CGCAACCAAGCAAGGCTGACCCATTGCGTCACCCTGTaGAGAAATCTATTACTACATCATCCAGGGACGGTC | + |
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Preference number: 3 (lower is better) Translates to: RNQARLTHCVTL*RNLLLHHPGTV Trigger: GACCGTCCCTGGATGATGTAGTAATAGATTTCTCCACAGGGTGACGCAATGGGTCAGCCTTGCTTGGTTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR-3UTR CAA 90 bp | AGACACACACATCCTCCCCACCCCTCAAACACACACACAATGCCACTAGCCTGCTCAGTCCCCATTTGCTaGTTTTGCAACTGTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: RHTHPPHPSNTHTMPLACSVPIC*FCNCRL Trigger: CAGTCTACAGTTGCAAAACAAGCAAATGGGGACTGA...GCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGGGTGGGGAGGATGTGTGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR TCA 72 bp | ACGGTCGTTCGGTTCTCCCTCCCATCCCCCAACATCTaGGTTGCCTTAAATCTGAGTGCTGCTAAAGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: TVVRFSLPSPNI*VALNLSAAKVV Trigger: CACTACTTTAGCAGCACTCAGATTTAAGGCAACTCAGATGTTGGGGGATGGGAGGGAGAACCGAACGACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR TCA 72 bp | CCTCTTCTAGACAAAGAGTTTAGAAACACACTGAGGTaGGCCAATGAGTCCCATCAACCAAGCCACGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: PLLDKEFRNTLR*ANESHQPSHVE Trigger: TTCTACGTGGCTTGGTTGATGGGACTCATTGGCTCACCTCAGTGTGTTTCTAAACTCTTTGTCTAGAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CCA 90 bp | AGCCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAAGGCAAAGCCCACTCTaGCCAAGGGGCTGTCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SHVEGGSRAGIWVMGRSPRQSPL*PRGCQV Trigger: GACTTGACAGCCCCTTGGCCAGAGTGGGCTTTGCCT...TGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR GCA 90 bp | ATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCCTGGAAAAGGGTCCATaGCAAAGCCATCGTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: MPLACVQAVWPLLGSLRSLEKGP*QSHRPE Trigger: TTCTGGACGATGGCTTTGGCATGGACCCTTTTCCAG...GCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR GCA 90 bp | GCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCTGGGCTGGATCCACTTCTaGAGGGAGCTGTATTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ATSLRAGCLAFAWFLAELGWIHF*RELYFL Trigger: AAGAAAATACAGCTCCCTGCAGAAGTGGATCCAGCC...CAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CCA 90 bp | CCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGAGGCTGTCAAGTCGTCTaGAAAAGGGTCCATGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: PRRRRVQSRDLGDGKVPRGCQVV*KRVHAK Trigger: TTTGGCATGGACCCTTTTCCAGACGACTTGACAGCC...TCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR GCA 90 bp | GCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCTGCTCCAAGACAGCTCTTCCGGCTTGAAGCTGTaGACGTTGACACACACTTTC | + |
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Preference number: 4 (lower is better) Translates to: AGCLAFAWFLAELLQDSSSGLKL*TLTHTF Trigger: GAAAGTGTGTGTCAACGTGCACAGCTTCAAGCCGGA...AGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CCA 90 bp | ATCTGGGTGATGGGAAGGTCCCCAGAGAAAAGCAACTCTTGCATTAACTGCAAGTCGGCGCAGGCGGCTTaGGTAGGAGCACGGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: IWVMGRSPEKSNSCINCKSAQAA*VGARER Trigger: CCTTTCCCGTGCTCCTACCCAAGCCGCCTGCGCCGA...CTTGCAGTTAATGCAAGAGTTGCTTTTCTCTGGGGACCTTCCCATCACCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CAA 72 bp | GCCTGCGTGCAGGCTGTCTGGCCTTTGCTTGGTTCCTaGCGGAGCTGCTCCAAGACAGCTCTCTGTAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: ACVQAVWPLLGS*RSCSKTALCKN Trigger: ATTTTTACAGAGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGCACGCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR TCA 90 bp | ACAACAGCACAATTCACACAACAAAGACACACACATCCTCCCCACCCCTCAAACGCTCTCTCCAAAGGGTaGGTACGGAGGGACCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TTAQFTQQRHTHPPHPSNALSKG*VRRDLG Trigger: CCCCAGGTCCCTCCGTACTCACCCTTTGGAGAGAGC...GTTTGAGGGGTGGGGAGGATGTGTGTGTCTTTGTTGTGTGAATTGTGCTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR TCA 90 bp | AGACACACACATCCTCCCCACCCCTCAAACACACACACAATGCCACTAGCCTGCGAGGAAGCTCGTTGTTaGAGCTGCTCTCTCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RHTHPPHPSNTHTMPLACEEARC*SCSLQR Trigger: CCTTTGGAGAGAGCAGCTTCAACAACGAGCTTCCTC...GCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGGGTGGGGAGGATGTGTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CCA 90 bp | ACACACACATCCTCCCCACCCCTCAAACACACACACAATGCCACTAGCCTGCGTGATGAGCAGGCCCTCTaGAGAAAGCGAGGCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: THTSSPPLKHTHNATSLRDEQAL*RKRGKY Trigger: GTATTTGCCTCGCTTTCTCCAGAGGGCCTGCTCATC...ACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGGGTGGGGAGGATGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR TCA 90 bp | CCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGAGCTGTATTTTCTTGGTaGAGTTCTTGGAGACAATCC | + |
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Preference number: 4 (lower is better) Translates to: PRRRRVQSRDLGDGKVPRAVFSW*SSWRQS Trigger: GGATTGTCTCCAAGAACTTCACCAAGAAAATACAGC...TCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR TCA 90 bp | CCCTCAAACACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGACTTCCTGGTTGTCTTaGGGAAGCTCGTTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSNTHTMPLACVQAVWPLTSWLS*GSSLLK Trigger: CTTCAACAACGAGCTTCCTCAAGACAACCAGGAAGT...CAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR GCA 90 bp | GTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGAGAAAGCTTCTCTTCATGTTTaGCTGAAACTTCCACGTATC | + |
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Preference number: 4 (lower is better) Translates to: VEGGSRAGIWVMGRSPEKASLHV*LKLPRI Trigger: GATACGTGGAAGTTTCAGGCAAACATGAAGAGAAGC...TTTCTCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR TCA 90 bp | ATCTGGGTGATGGGAAGGTCCCCAGAGAAAAGCAACTCTTGCATTAACTGCAAGCTCTTCATGTTTGCCTaGAACTTCCACGTATCCATC | + |
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Preference number: 4 (lower is better) Translates to: IWVMGRSPEKSNSCINCKLFMFA*NFHVSI Trigger: GATGGATACGTGGAAGTTTCAGGCAAACATGAAGAG...CTTGCAGTTAATGCAAGAGTTGCTTTTCTCTGGGGACCTTCCCATCACCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CCA 90 bp | ATCTGGGTGATGGGAAGGTCCCCAGAGAAAAGCAACTCTTGCATTAACTGCAAGCCACGTATCCATCCTTaGTCTTTACCATCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: IWVMGRSPEKSNSCINCKPRIHP*SLPSAL Trigger: AAGAGCTGATGGTAAAGACCAAGGATGGATACGTGG...CTTGCAGTTAATGCAAGAGTTGCTTTTCTCTGGGGACCTTCCCATCACCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| 3UTR CAA 72 bp | TCCTTTGACCTAACGCAACCAAGCAAGGCTGACCCATaGCGTCACCCTGTGGAGAAATCTATTACTACATCA | + |
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Preference number: 4 (lower is better) Translates to: SFDLTQPSKADP*RHPVEKSITTS Trigger: TGATGTAGTAATAGATTTCTCCACAGGGTGACGCAATGGGTCAGCCTTGCTTGGTTGCGTTAGGTCAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS TCA 90 bp | AGGGTCCATGCCAAAGCCATCGTCCAGAAGGCGGGAGGAGAGCGGTaGGTCCCGAAAGGGGTCTCGGCGCAGGCGGCTTGGGTAGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RVHAKAIVQKAGGER*VPKGVSAQAAWVGA Trigger: TGCTCCTACCCAAGCCGCCTGCGCCGAGACCCCTTTCGGGACTCACCGCTCTCCTCCCGCCTTCTGGACGATGGCTTTGGCATGGACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS GCA 90 bp | CCCACTCTGGCCAAGGGGCTGTCAAGTCGTCTGGAAAAGGGTCCATaGCAAAGCCATCGTCCAGAAGGCGGGAGGAGAGCGGTGAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: PTLAKGLSSRLEKGP*QSHRPEGGRRAVSP Trigger: GGGACTCACCGCTCTCCTCCCGCCTTCTGGACGATGGCTTTGGCATGGACCCTTTTCCAGACGACTTGACAGCCCCTTGGCCAGAGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | CCCTCAAACACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGCTCGGCGCAGGCGGCTaGGGTAGGAGCACGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PSNTHTMPLACVQAVWPLLGAGG*GRSTGK Trigger: CTTTCCCGTGCTCCTACCCAAGCCGCCTGCGCCGAG...CAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 90 bp | GAGCCGAGGCAAAGCCCACTCTGGCCAAGGGGCTGTCAAGTCGTCTaGAAAAGGGTCCATGCCAAAGCCATCGTCCAGAAGGCGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: EPRQSPLWPRGCQVV*KRVHAKAIVQKAGG Trigger: TCCTCCCGCCTTCTGGACGATGGCTTTGGCATGGACCCTTTTCCAGACGACTTGACAGCCCCTTGGCCAGAGTGGGCTTTGCCTCGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 90 bp | TCGTTGTTGAAGCTGCTCTCTCCAAAGGGTGAGTACGGAGGGACCTaGGGAGCCTCGATGATGAGCAGGCCCTCTGGAGAAAGCGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLLKLLSPKGEYGGT*GASMMSRPSGESEA Trigger: TGCCTCGCTTTCTCCAGAGGGCCTGCTCATCATCGAGGCTCCCCAGGTCCCTCCGTACTCACCCTTTGGAGAGAGCAGCTTCAACAACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS TCA 90 bp | GTTGTCTTGAGGAAGCTCGTTGTTGAAGCTGCTCTCTCCAAAGGGTaGGTACGGAGGGACCTGGGGAGCCTCGATGATGAGCAGGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VVLRKLVVEAALSKG*VRRDLGSLDDEQAL Trigger: GAGGGCCTGCTCATCATCGAGGCTCCCCAGGTCCCTCCGTACTCACCCTTTGGAGAGAGCAGCTTCAACAACGAGCTTCCTCAAGACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | CCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGATTCTTGGTGAAGTTCTaGGAGACAATCCCACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PRRRRVQSRDLGDGKVPRFLVKF*ETIPPS Trigger: GGAAGGTGGGATTGTCTCCAAGAACTTCACCAAGAA...TCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | ACACACACATCCTCCCCACCCCTCAAACACACACACAATGCCACTAGCCTGCGTATCAGCTCTTCCGGCTaGAAGCTGTGCACGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: THTSSPPLKHTHNATSLRISSSG*KLCTLT Trigger: TGTCAACGTGCACAGCTTCAAGCCGGAAGAGCTGAT...ACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGGGTGGGGAGGATGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | CCACGTAGAAGGAGGGTCCAGAGCAGGGATCTGGGTGATGGGAAGGTCCCCAGATGCTTCTCTTCATGTTaGCCTGAAACTTCCACGTAT | + |
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Preference number: 5 (lower is better) Translates to: PRRRRVQSRDLGDGKVPRCFSSC*PETSTY Trigger: ATACGTGGAAGTTTCAGGCAAACATGAAGAGAAGCA...TCTGGGGACCTTCCCATCACCCAGATCCCTGCTCTGGACCCTCCTTCTACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | GCAGGCTGTCTGGCCTTTGCTTGGTTCCTTGCGGAGCTGCTCCAAGACAGCTCTGGGAGCTGTATTTTCTaGGTGAAGTTCTTGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: AGCLAFAWFLAELLQDSSGSCIF*VKFLET Trigger: TGTCTCCAAGAACTTCACCAAGAAAATACAGCTCCC...AGAGCTGTCTTGGAGCAGCTCCGCAAGGAACCAAGCAAAGGCCAGACAGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | CCCTCAAACACACACACAATGCCACTAGCCTGCGTGCAGGCTGTCTGGCCTTTGGACTTCCTGGTTGTCTaGAGGAAGCTCGTTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: PSNTHTMPLACVQAVWPLDFLVV*RKLVVE Trigger: TTCAACAACGAGCTTCCTCAAGACAACCAGGAAGTC...CAAAGGCCAGACAGCCTGCACGCAGGCTAGTGGCATTGTGTGTGTGTTTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 90 bp | GATGATGAGCAGGCCCTCTGGAGAAAGCGAGGCAAATACAGTGGCTaGATCCACTTCTGCAGGGAGCTGTATTTTCTTGGTGAAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: DDEQALWRKRGKYSG*IHFCRELYFLGEVL Trigger: AAGAACTTCACCAAGAAAATACAGCTCCCTGCAGAAGTGGATCCAGCCACTGTATTTGCCTCGCTTTCTCCAGAGGGCCTGCTCATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS-3UTR CAA 90 bp | ACCCATTGCGTCACCCTGTGGAGAAATCTATTACTACATCATCCAGGGACGGTCTTGAAGCTGTGCACGTaGACACACACTTTCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: THCVTLWRNLLLHHPGTVLKLCT*THTFQG Trigger: GCCTTGGAAAGTGTGTGTCAACGTGCACAGCTTCAA...GACCGTCCCTGGATGATGTAGTAATAGATTTCTCCACAGGGTGACGCAATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS TCA 90 bp | ATACAGTGGCTGGATCCACTTCTGCAGGGAGCTGTATTTTCTTGGTaGAGTTCTTGGAGACAATCCCACCTTCCTGCTGCTTCTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: IQWLDPLLQGAVFSW*SSWRQSHLPAASLH Trigger: ATGAAGAGAAGCAGCAGGAAGGTGGGATTGTCTCCAAGAACTTCACCAAGAAAATACAGCTCCCTGCAGAAGTGGATCCAGCCACTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS GCA 90 bp | AGCTGTATTTTCTTGGTGAAGTTCTTGGAGACAATCCCACCTTCCTaGTGCTTCTCTTCATGTTTGCCTGAAACTTCCACGTATCCATCC | + |
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Preference number: 5 (lower is better) Translates to: SCIFLVKFLETIPPS*CFSSCLPETSTYPS Trigger: GGATGGATACGTGGAAGTTTCAGGCAAACATGAAGAGAAGCAGCAGGAAGGTGGGATTGTCTCCAAGAACTTCACCAAGAAAATACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS TCA 72 bp | GCCAAAGCCATCGTCCAGAAGGCGGGAGGAGAGCGGTaGGTCCCGAAAGGGGTCTCGGCGCAGGCGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: AKAIVQKAGGER*VPKGVSAQAAW Trigger: CCAAGCCGCCTGCGCCGAGACCCCTTTCGGGACTCACCGCTCTCCTCCCGCCTTCTGGACGATGGCTTTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CAA 72 bp | GCGGTGAGTCCCGAAAGGGGTCTCGGCGCAGGCGGCTaGGGTAGGAGCACGGGAAAGGCAATTGCCCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: AVSPERGLGAGG*GRSTGKAIARQ Trigger: CTGACGGGCAATTGCCTTTCCCGTGCTCCTACCCAAGCCGCCTGCGCCGAGACCCCTTTCGGGACTCACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS GCA 72 bp | GCCAAGGGGCTGTCAAGTCGTCTGGAAAAGGGTCCATaGCAAAGCCATCGTCCAGAAGGCGGGAGGAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: AKGLSSRLEKGP*QSHRPEGGRRA Trigger: CGCTCTCCTCCCGCCTTCTGGACGATGGCTTTGGCATGGACCCTTTTCCAGACGACTTGACAGCCCCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 72 bp | AGGGACCTGGGGAGCCTCGATGATGAGCAGGCCCTCTaGAGAAAGCGAGGCAAATACAGTGGCTGGATCCAC | + |
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Preference number: 6 (lower is better) Translates to: RDLGSLDDEQAL*RKRGKYSGWIH Trigger: GTGGATCCAGCCACTGTATTTGCCTCGCTTTCTCCAGAGGGCCTGCTCATCATCGAGGCTCCCCAGGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 72 bp | AAGCTGCTCTCTCCAAAGGGTGAGTACGGAGGGACCTaGGGAGCCTCGATGATGAGCAGGCCCTCTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: KLLSPKGEYGGT*GASMMSRPSGE Trigger: TTCTCCAGAGGGCCTGCTCATCATCGAGGCTCCCCAGGTCCCTCCGTACTCACCCTTTGGAGAGAGCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS TCA 72 bp | AGGAAGCTCGTTGTTGAAGCTGCTCTCTCCAAAGGGTaGGTACGGAGGGACCTGGGGAGCCTCGATGATGAG | + |
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Preference number: 6 (lower is better) Translates to: RKLVVEAALSKG*VRRDLGSLDDE Trigger: CTCATCATCGAGGCTCCCCAGGTCCCTCCGTACTCACCCTTTGGAGAGAGCAGCTTCAACAACGAGCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 72 bp | CAAAGCCCACTCTGGCCAAGGGGCTGTCAAGTCGTCTaGAAAAGGGTCCATGCCAAAGCCATCGTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QSPLWPRGCQVV*KRVHAKAIVQK Trigger: CTTCTGGACGATGGCTTTGGCATGGACCCTTTTCCAGACGACTTGACAGCCCCTTGGCCAGAGTGGGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS GCA 72 bp | TTGGTCTTTACCATCAGCTCTTCCGGCTTGAAGCTGTaGACGTTGACACACACTTTCCAAGGCTCCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LVFTISSSGLKL*TLTHTFQGSPG Trigger: CCCTGGGGAGCCTTGGAAAGTGTGTGTCAACGTGCACAGCTTCAAGCCGGAAGAGCTGATGGTAAAGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CCA 72 bp | CAGGCCCTCTGGAGAAAGCGAGGCAAATACAGTGGCTaGATCCACTTCTGCAGGGAGCTGTATTTTCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: QALWRKRGKYSG*IHFCRELYFLG Trigger: ACCAAGAAAATACAGCTCCCTGCAGAAGTGGATCCAGCCACTGTATTTGCCTCGCTTTCTCCAGAGGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CAA 72 bp | GTGGCTGGATCCACTTCTGCAGGGAGCTGTATTTTCTaGGTGAAGTTCTTGGAGACAATCCCACCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VAGSTSAGSCIF*VKFLETIPPSC Trigger: GCAGGAAGGTGGGATTGTCTCCAAGAACTTCACCAAGAAAATACAGCTCCCTGCAGAAGTGGATCCAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS TCA 72 bp | CTGGATCCACTTCTGCAGGGAGCTGTATTTTCTTGGTaGAGTTCTTGGAGACAATCCCACCTTCCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LDPLLQGAVFSW*SSWRQSHLPAA Trigger: AGCAGCAGGAAGGTGGGATTGTCTCCAAGAACTTCACCAAGAAAATACAGCTCCCTGCAGAAGTGGATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CAA 90 bp | GCAAATACAGTGGCTGGATCCACTTCTGCAGGGAGCTGTATTTTCTaGGTGAAGTTCTTGGAGACAATCCCACCTTCCTGCTGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ANTVAGSTSAGSCIF*VKFLETIPPSCCFS Trigger: AGAGAAGCAGCAGGAAGGTGGGATTGTCTCCAAGAACTTCACCAAGAAAATACAGCTCCCTGCAGAAGTGGATCCAGCCACTGTATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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| CDS CAA 72 bp | TCTTCATGTTTGCCTGAAACTTCCACGTATCCATCCTaGGTCTTTACCATCAGCTCTTCCGGCTTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSCLPETSTYPS*VFTISSSGLKL Trigger: CAGCTTCAAGCCGGAAGAGCTGATGGTAAAGACCAAGGATGGATACGTGGAAGTTTCAGGCAAACATGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036991.5 |
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