Pregenerated sensors for HSPB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006221Ensembl transcript IDs: ENSMUST00000102486.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGTGGCCAGCCTCTCATTTGCCAGGAAGGGGCTTCTGGTCCCCTaGCCTGCAGAAATGCCATTGAAGCCGCCACTCTGTGTTAGACTC | + |
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Preference number: 1 (lower is better) Translates to: LVASLSFARKGLLVP*PAEMPLKPPLCVRL Trigger: GAGTCTAACACAGAGTGGCGGCTTCAATGGCATTTCTGCAGGGCAGGGGACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR TCA 90 bp | CTCAGCCCCTCTATTGTGAACTTAGATAGGGAGGGTCTATCTGGGTaGGAGCAGACAGGTCCCTGGACTGCGTTGGATGGAGAGGGATGC | + |
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Preference number: 1 (lower is better) Translates to: LSPSIVNLDREGLSG*EQTGPWTALDGEGC Trigger: GCATCCCTCTCCATCCAACGCAGTCCAGGGACCTGTCTGCTCTCACCCAGATAGACCCTCCCTATCTAAGTTCACAATAGAGGGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CCA 90 bp | ACAAGGGTTTTTGCCCTGAATTTGGGGGCCAGAAGAGATCTGGTTTaGGGTTCTTCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TRVFALNLGARRDLV*GSSCGHHLQLGRSR Trigger: CCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGAAGAACCCCAAACCAGATCTCTTCTGGCCCCCAAATTCAGGGCAAAAACCCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR TCA 90 bp | TACAGGTGTCTTTGTCTGGTACATGTAGCTGTTAGAGCCTCAGGGTaGCAGGTAGCCCTGGGTTTGAGGTTTCGAGAGTTACAAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: YRCLCLVHVAVRASG*QVALGLRFRELQGR Trigger: CCTTCCTTGTAACTCTCGAAACCTCAAACCCAGGGCTACCTGTCACCCTGAGGCTCTAACAGCTACATGTACCAGACAAAGACACCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGCCGCTGAGGCAGCGCTGGCTTCAGAGACAAACCTGGGCATCCAACTGCCAGGAAGGGGCTTCTaGTCCCCTGCCCTGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LRAAEAALASETNLGIQLPGRGF*SPALQK Trigger: TTTCTGCAGGGCAGGGGACCAGAAGCCCCTTCCTGG...CAGTTGGATGCCCAGGTTTGTCTCTGAAGCCAGCGCTGCCTCAGCGGCTCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CAA 90 bp | GCAGTCTACCTAGGCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTaGCCAGGAAGGGGCTTCTGGTCCCCTGCCCTGCAGAAATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: AVYLGQKPCLWPASH*PGRGFWSPALQKCH Trigger: ATGGCATTTCTGCAGGGCAGGGGACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGCCTAGGTAGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGCCGCTGAGGCAGCGCTGGCTTCAGAGACAAACCTGGGCATCCAACTGTCTCTCTGGCTTCCCTaGGGCAGTCTACCTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LRAAEAALASETNLGIQLSLWLP*GSLPRP Trigger: TGGCCTAGGTAGACTGCCTCAGGGAAGCCAGAGAGA...CAGTTGGATGCCCAGGTTTGTCTCTGAAGCCAGCGCTGCCTCAGCGGCTCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR GCA 90 bp | GTACACAGAGGGGAGAGTCTGAGAGCCGCTGAGGCAGCGCTGGCTTCAGAGACAGGCCAGCCTCTCATTTaGCAGGAAGGGGCTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: VHRGESLRAAEAALASETGQPLI*QEGASG Trigger: ACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCC...TGTCTCTGAAGCCAGCGCTGCCTCAGCGGCTCTCAGACTCTCCCCTCTGTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGGTTCTGGTCCCCTGCCCTaGAGAAATGCCATTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LWPPSAVRAKQGMWLRRGSGPLP*RNAIEA Trigger: GGCTTCAATGGCATTTCTGCAGGGCAGGGGACCAGA...ACCTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTTGCCAGGAAGGGGCTTCTGGTTCTTGCTCTCCAGGTTaGTACCTCAGCCCCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: ARSPACGQPLICQEGASGSCSPG*YLSPSI Trigger: AATAGAGGGGCTGAGGTACCAACCTGGAGAGCAAGA...ACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGCTGCAGAAATGCCATTaGAGCCGCCACTCTGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SCGHHLQLGRSRACGSGELQKCH*SRHSVL Trigger: TAACACAGAGTGGCGGCTTCAATGGCATTTCTGCAG...CTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR TCA 90 bp | AGTTACAAGGAAGGTAACAGTCATGGCTATCTCTCTGGCTTCCCTGAGGCAGTCGAGGGTCTATCTGGGTaGGAGCAGACAGGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SYKEGNSHGYLSGFPEAVEGLSG*EQTGPW Trigger: CCAGGGACCTGTCTGCTCTCACCCAGATAGACCCTC...GACTGCCTCAGGGAAGCCAGAGAGATAGCCATGACTGTTACCTTCCTTGTAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CCA 90 bp | GAGATAGGAGCCTCATGTCATTTTAATAAACCCCATCTAGGTACAGGTGTCTTTGGGCCTGAGAGTGTGTaGAGTGACTGGGGCCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: EIGASCHFNKPHLGTGVFGPESV*SDWGLG Trigger: GCCTAGGCCCCAGTCACTCCACACACTCTCAGGCCC...AAAGACACCTGTACCTAGATGGGGTTTATTAAAATGACATGAGGCTCCTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR GCA 72 bp | CTGGCTCTTCCTCTCACTTCCAAAGAGGACCCTCTCTaGAGGGGAAGCCACCCAGGAGCCCTGGGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LALPLTSKEDPL*RGSHPGALGSG Trigger: GCCAGAGCCCAGGGCTCCTGGGTGGCTTCCCCTGCAGAGAGGGTCCTCTTTGGAAGTGAGAGGAAGAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR TCA 72 bp | GTCCCCAGTACACAGAGGGGAGAGTCTGAGAGCCGCTaGGGCAGCGCTGGCTTCAGAGACAAACCTGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VPSTQRGESESR*GSAGFRDKPGH Trigger: ATGCCCAGGTTTGTCTCTGAAGCCAGCGCTGCCTCAGCGGCTCTCAGACTCTCCCCTCTGTGTACTGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CCA 72 bp | GAGCCGCTGAGGCAGCGCTGGCTTCAGAGACAAACCTaGGCATCCAACTGGCTCAGAGACGCCAGTCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: EPLRQRWLQRQT*ASNWLRDASLH Trigger: ATGGAGACTGGCGTCTCTGAGCCAGTTGGATGCCCAGGTTTGTCTCTGAAGCCAGCGCTGCCTCAGCGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGGGCCAGAAGCCCTGCTaGTGGCCAGCCTCTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: SCGHHLQLGRSRACGSGEGQKPC*WPASHL Trigger: CAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGCC...CTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTCTCACTTCCAAAGAGGACCCTCTCTGCAGGGGAAGCCACCCAGGAGCCGTCTTGCTCTCCAGGTaGGTACCTCAGCCCCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LPLTSKEDPLCRGSHPGAVLLSR*VPQPLY Trigger: ATAGAGGGGCTGAGGTACCAACCTGGAGAGCAAGAC...GGCTCCTGGGTGGCTTCCCCTGCAGAGAGGGTCCTCTTTGGAAGTGAGAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CAA 90 bp | AAGGAAGGTAACAGTCATGGCTATCTCTCTGGCTTCCCTGAGGCAGTCTACCTATGGCCAGCCTCTCATTaGCCAGGAAGGGGCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: KEGNSHGYLSGFPEAVYLWPASH*PGRGFW Trigger: CCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCA...TAGGTAGACTGCCTCAGGGAAGCCAGAGAGATAGCCATGACTGTTACCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CCA 72 bp | TTTGCCCTGAATTTGGGGGCCAGAAGAGATCTGGTTTaGGGTTCTTCTTGTGGCCACCATCTGCAGTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: FALNLGARRDLV*GSSCGHHLQLG Trigger: CCCTAACTGCAGATGGTGGCCACAAGAAGAACCCCAAACCAGATCTCTTCTGGCCCCCAAATTCAGGGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGACAAGGGTTTTTGCCCTGAATTTGGGGGCCAGAAGAGATCTGGTTTGGCCTGCAGAAATGCCATaGAAGCCGCCACTCTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: RLTRVFALNLGARRDLVWPAEMP*KPPLCV Trigger: AACACAGAGTGGCGGCTTCAATGGCATTTCTGCAGG...CCAAACCAGATCTCTTCTGGCCCCCAAATTCAGGGCAAAAACCCTTGTCAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR-3UTR CAA 90 bp | AGTCAGAGCCCAGGTCCCCCAGGGTTAAGGCTGACAAGGGTTTTTGCCCTGAATAGACGCCAGTCTCCATaGATGAAAACAGAGATGCTA | + |
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Preference number: 3 (lower is better) Translates to: SQSPGPPGLRLTRVFALNRRQSP*MKTEML Trigger: TAGCATCTCTGTTTTCATCAATGGAGACTGGCGTCT...ATTCAGGGCAAAAACCCTTGTCAGCCTTAACCCTGGGGGACCTGGGCTCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTACAAGTCCTaGCTCTTCCTCTCACTTCCAAAGAGGACCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVYKS*LFLSLPKRTLS Trigger: AGAGAGGGTCCTCTTTGGAAGTGAGAGGAAGAGCCAGGACTTGTACACACACACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR TCA 72 bp | CTTTGTCTGGTACATGTAGCTGTTAGAGCCTCAGGGTaGCAGGTAGCCCTGGGTTTGAGGTTTCGAGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: LCLVHVAVRASG*QVALGLRFREL Trigger: TAACTCTCGAAACCTCAAACCCAGGGCTACCTGTCACCCTGAGGCTCTAACAGCTACATGTACCAGACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | GCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTTGCCAGGAAGGGGCTTCTGGTTGGACATGTTCTGTGTaGGGGTGGCGCCGCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ARSPACGQPLICQEGASGWTCSV*GWRRAR Trigger: CCGGGCGCGGCGCCACCCCCACACAGAACATGTCCA...ACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CAA 72 bp | CTAGGCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTaGCCAGGAAGGGGCTTCTGGTCCCCTGCCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGQKPCLWPASH*PGRGFWSPALQ Trigger: CTGCAGGGCAGGGGACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR GCA 90 bp | CTTCCTCTCACTTCCAAAGAGGACCCTCTCTGCAGGGGAAGCCACCCAGGAGCCGACTGTGCCATCAGCTaGCAGCTTCTCAGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LPLTSKEDPLCRGSHPGADCAIS*QLLSPH Trigger: GTGCGGGCTGAGAAGCTGGCAGCTGATGGCACAGTC...GGCTCCTGGGTGGCTTCCCCTGCAGAGAGGGTCCTCTTTGGAAGTGAGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTCTCACTTCCAAAGAGGACCCTCTCTGCAGGGGAAGCCACCCAGGAGCCGCCAGGGGCTCCGAGTaGGGCAGCATAAAACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LPLTSKEDPLCRGSHPGAARGSE*GSIKLP Trigger: TGGCAGTTTTATGCTGCCCCACTCGGAGCCCCTGGC...GGCTCCTGGGTGGCTTCCCCTGCAGAGAGGGTCCTCTTTGGAAGTGAGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | TTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGGTGTCTTGATGTTTCCTTaGCCCCCGGGACGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LWPPSAVRAKQGMWLRRGVLMFP*PPGRAG Trigger: CCCAGCCCGTCCCGGGGGCCAAGGAAACATCAAGAC...ACCTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | GCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTTGCCAGGAAGGGGCTTCTGGTGTCCGGAAGGTCTGCTaGACATGTTCTGTGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ARSPACGQPLICQEGASGVRKVC*TCSVWG Trigger: CCCCCACACAGAACATGTCCAGCAGACCTTCCGGAC...ACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR GCA 90 bp | GGGGCTTCTGGTCCCCTGCCCTGCAGAAATGCCATTGAAGCCGCCACTCTGTGTTCAGTCCGGAAGGTCTaGTGGACATGTTCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GASGPLPCRNAIEAATLCSVRKV*WTCSVW Trigger: CCACACAGAACATGTCCAGCAGACCTTCCGGACTGA...ACACAGAGTGGCGGCTTCAATGGCATTTCTGCAGGGCAGGGGACCAGAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | TCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGTCAAAGCCTTCTCCATaGGTGGGTCCTGGGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SCGHHLQLGRSRACGSGESKPSP*VGPGLE Trigger: TTCCAGCCCAGGACCCACCCATGGAGAAGGCTTTGA...CTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | TCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGGCCCGCACCTCGATGTaGTTGTTGAAGGTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SCGHHLQLGRSRACGSGEARTSM*LLKVVT Trigger: TGTCACCACCTTCAACAACCACATCGAGGTGCGGGC...CTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CAA 72 bp | AAGGGGCTTCTGGTCCCCTGCCCTGCAGAAATGCCATaGAAGCCGCCACTCTGTGTTAGACTCTGCCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: KGLLVPCPAEMP*KPPLCVRLCPR Trigger: ACGAGGGCAGAGTCTAACACAGAGTGGCGGCTTCAATGGCATTTCTGCAGGGCAGGGGACCAGAAGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | GCTTTGAATTGGGCTCCAACCAGTGGGAATGAGTATTTAAGGCATAGGACAATGGGGTGGGTCCTGGGCTaGAAGGGCACGGGAGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ALNWAPTSGNEYLRHRTMGWVLG*KGTGGR Trigger: TCGGCCTCCCGTGCCCTTCCAGCCCAGGACCCACCC...CATTGTCCTATGCCTTAAATACTCATTCCCACTGGTTGGAGCCCAATTCAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR TCA 90 bp | GGTAACAGTCATGGCTATCTCTCTGGCTTCCCTGAGGCAGTCTACCTAGGCCAGGAGCAAAGGTGTTCATaGCTGTGCCATCAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GNSHGYLSGFPEAVYLGQEQRCS*LCHQLP Trigger: TGGCAGCTGATGGCACAGTCATGAACACCTTTGCTC...CTGGCCTAGGTAGACTGCCTCAGGGAAGCCAGAGAGATAGCCATGACTGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR TCA 90 bp | TCCTGGCTCTTCCTCTCACTTCCAAAGAGGACCCTCTCTGCAGGGGAAGCCACCGGTAGTTGGCACTTGTaGGCAAAGGTGTTCATGACT | + |
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Preference number: 4 (lower is better) Translates to: SWLFLSLPKRTLSAGEATGSWHL*AKVFMT Trigger: AGTCATGAACACCTTTGCTCACAAGTGCCAACTACC...GGTGGCTTCCCCTGCAGAGAGGGTCCTCTTTGGAAGTGAGAGGAAGAGCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR TCA 90 bp | GCAGTCTACCTAGGCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTTGCCAGGAACTGCCAAAGTCGTCTaGAAACATGCTCAAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AVYLGQKPCLWPASHLPGTAKVV*KHAQSL Trigger: AAGGCTTTGAGCATGTTTTCAGACGACTTTGGCAGT...TCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGCCTAGGTAGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CCA 90 bp | GCTTTGAATTGGGCTCCAACCAGTGGGAATGAGTATTTAAGGCATAGGACAATGAGCCTTCTCCATGGGTaGGTCCTGGGCTGGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ALNWAPTSGNEYLRHRTMSLLHG*VLGWKG Trigger: GCCCTTCCAGCCCAGGACCCACCCATGGAGAAGGCT...CATTGTCCTATGCCTTAAATACTCATTCCCACTGGTTGGAGCCCAATTCAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR GCA 90 bp | GGTAACAGTCATGGCTATCTCTCTGGCTTCCCTGAGGCAGTCTACCTAGGCCAGAGTCGTCTGAAAACATaGTCAAAGCCTTCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GNSHGYLSGFPEAVYLGQSRLKT*SKPSPW Trigger: CCATGGAGAAGGCTTTGAGCATGTTTTCAGACGACT...CTGGCCTAGGTAGACTGCCTCAGGGAAGCCAGAGAGATAGCCATGACTGTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| 3UTR CAA 72 bp | CTGGGCATCCAACTGGCTCAGAGACGCCAGTCTCCATaGATGAAAACAGAGATGCTAACTGTGACTCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LGIQLAQRRQSP*MKTEMLTVTLR Trigger: TCTAAGAGTCACAGTTAGCATCTCTGTTTTCATCAATGGAGACTGGCGTCTCTGAGCCAGTTGGATGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS TCA 90 bp | TCTGCTGGACATGTTCTGTGTGGGGGTGGCGCCGCGCCCGGATGGTaGGGCTACCATCCTCTCGAAGGGCCGAGGTCACCGATGTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SAGHVLCGGGAAPGW*GYHPLEGPRSPMLG Trigger: ACCCAACATCGGTGACCTCGGCCCTTCGAGAGGATGGTAGCCTCACCATCCGGGCGCGGCGCCACCCCCACACAGAACATGTCCAGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CAA 90 bp | GCCAGAAGCCCTGCTTGTGGCCAGCCTCTCATTTGCCAGGAAGGGGCTTCTGGTGGTCTTGATGTTTCCTaGGCCCCCGGGACGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ARSPACGQPLICQEGASGGLDVS*APGTGW Trigger: CCAGCCCGTCCCGGGGGCCAAGGAAACATCAAGACC...ACCAGAAGCCCCTTCCTGGCAAATGAGAGGCTGGCCACAAGCAGGGCTTCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 90 bp | TTTATCTCAGTCCGGAAGGTCTGCTGGACATGTTCTGTGTGGGGGTaGCGCCGCGCCCGGATGGTGAGGCTACCATCCTCTCGAAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FISVRKVCWTCSVWG*RRARMVRLPSSRRA Trigger: GGCCCTTCGAGAGGATGGTAGCCTCACCATCCGGGCGCGGCGCCACCCCCACACAGAACATGTCCAGCAGACCTTCCGGACTGAGATAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 90 bp | CAGATTTTTATCTCAGTCCGGAAGGTCTGCTGGACATGTTCTGTGTaGGGGTGGCGCCGCGCCCGGATGGTGAGGCTACCATCCTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: QIFISVRKVCWTCSV*GWRRARMVRLPSSR Trigger: TCGAGAGGATGGTAGCCTCACCATCCGGGCGCGGCGCCACCCCCACACAGAACATGTCCAGCAGACCTTCCGGACTGAGATAAAAATCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CAA 90 bp | GTACACAGAGGGGAGAGTCTGAGAGCCGCTGAGGCAGCGCTGGCTTCAGAGACACGCACCTCGATGTGGTaGTTGAAGGTGGTGACAATG | + |
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Preference number: 5 (lower is better) Translates to: VHRGESLRAAEAALASETRTSMW*LKVVTM Trigger: CATTGTCACCACCTTCAACAACCACATCGAGGTGCG...TGTCTCTGAAGCCAGCGCTGCCTCAGCGGCTCTCAGACTCTCCCCTCTGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CAA 90 bp | GATCTGGTTTGGGGTTCTTCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGCCGAGGTCACCGATGTaGGGTCCACATCCTCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: DLVWGSSCGHHLQLGRSRPRSPM*GPHPLV Trigger: TACCAGAGGATGTGGACCCAACATCGGTGACCTCGG...CCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGAAGAACCCCAAACCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS-3UTR CAA 90 bp | TCTTGTGGCCACCATCTGCAGTTAGGGCGAAGCAGGGCATGTGGCTCAGGAGAGACCTCGATGTGGTTGTaGAAGGTGGTGACAATGATG | + |
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Preference number: 5 (lower is better) Translates to: SCGHHLQLGRSRACGSGETSMWL*KVVTMM Trigger: CATCATTGTCACCACCTTCAACAACCACATCGAGGT...CTCTCCTGAGCCACATGCCCTGCTTCGCCCTAACTGCAGATGGTGGCCACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS TCA 90 bp | GAGGTCACCGATGTTGGGTCCACATCCTCTGGTAGTTGGCACTTGTaGGCAAAGGTGTTCATGACTGTGCCATCAGCTGCCAGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EVTDVGSTSSGSWHL*AKVFMTVPSAASFS Trigger: TGAGAAGCTGGCAGCTGATGGCACAGTCATGAACACCTTTGCTCACAAGTGCCAACTACCAGAGGATGTGGACCCAACATCGGTGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 90 bp | ATGACTGTGCCATCAGCTGCCAGCTTCTCAGCCCGCACCTCGATGTaGTTGTTGAAGGTGGTGACAATGATGTCTTCAGGGGAGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: MTVPSAASFSARTSM*LLKVVTMMSSGEKS Trigger: AGACTTCTCCCCTGAAGACATCATTGTCACCACCTTCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCAGCTGATGGCACAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS TCA 72 bp | CATGTTCTGTGTGGGGGTGGCGCCGCGCCCGGATGGTaGGGCTACCATCCTCTCGAAGGGCCGAGGTCACCG | + |
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Preference number: 6 (lower is better) Translates to: HVLCGGGAAPGW*GYHPLEGPRSP Trigger: CGGTGACCTCGGCCCTTCGAGAGGATGGTAGCCTCACCATCCGGGCGCGGCGCCACCCCCACACAGAACATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 72 bp | GTCCGGAAGGTCTGCTGGACATGTTCTGTGTGGGGGTaGCGCCGCGCCCGGATGGTGAGGCTACCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VRKVCWTCSVWG*RRARMVRLPSS Trigger: AGAGGATGGTAGCCTCACCATCCGGGCGCGGCGCCACCCCCACACAGAACATGTCCAGCAGACCTTCCGGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 72 bp | ATCTCAGTCCGGAAGGTCTGCTGGACATGTTCTGTGTaGGGGTGGCGCCGCGCCCGGATGGTGAGGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: ISVRKVCWTCSV*GWRRARMVRLP Trigger: TGGTAGCCTCACCATCCGGGCGCGGCGCCACCCCCACACAGAACATGTCCAGCAGACCTTCCGGACTGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 72 bp | CAAAGTCGTCTGAAAACATGCTCAAAGCCTTCTCCATaGGTGGGTCCTGGGCTGGAAGGGCACGGGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QSRLKTCSKPSP*VGPGLEGHGRP Trigger: CGGCCTCCCGTGCCCTTCCAGCCCAGGACCCACCCATGGAGAAGGCTTTGAGCATGTTTTCAGACGACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CCA 72 bp | GAAAACATGCTCAAAGCCTTCTCCATGGGTGGGTCCTaGGCTGGAAGGGCACGGGAGGCCGAAGAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ENMLKAFSMGGS*AGRAREAEEEE Trigger: CTCTTCTTCTTCGGCCTCCCGTGCCCTTCCAGCCCAGGACCCACCCATGGAGAAGGCTTTGAGCATGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CAA 72 bp | GGCTACCATCCTCTCGAAGGGCCGAGGTCACCGATGTaGGGTCCACATCCTCTGGTAGTTGGCACTTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GYHPLEGPRSPM*GPHPLVVGTCE Trigger: CTCACAAGTGCCAACTACCAGAGGATGTGGACCCAACATCGGTGACCTCGGCCCTTCGAGAGGATGGTAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS TCA 72 bp | CCTCTGGTAGTTGGCACTTGTGAGCAAAGGTGTTCATaGCTGTGCCATCAGCTGCCAGCTTCTCAGCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: PLVVGTCEQRCS*LCHQLPASQPA Trigger: TGCGGGCTGAGAAGCTGGCAGCTGATGGCACAGTCATGAACACCTTTGCTCACAAGTGCCAACTACCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CAA 72 bp | GCTGCCAGCTTCTCAGCCCGCACCTCGATGTGGTTGTaGAAGGTGGTGACAATGATGTCTTCAGGGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: AASFSARTSMWL*KVVTMMSSGEK Trigger: CTTCTCCCCTGAAGACATCATTGTCACCACCTTCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CAA 72 bp | TCAGCTGCCAGCTTCTCAGCCCGCACCTCGATGTGGTaGTTGAAGGTGGTGACAATGATGTCTTCAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SAASFSARTSMW*LKVVTMMSSGE Trigger: CTCCCCTGAAGACATCATTGTCACCACCTTCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CAA 90 bp | GTGCCATCAGCTGCCAGCTTCTCAGCCCGCACCTCGATGTGGTTGTaGAAGGTGGTGACAATGATGTCTTCAGGGGAGAAGTCTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: VPSAASFSARTSMWL*KVVTMMSSGEKSLM Trigger: CATGAGAGACTTCTCCCCTGAAGACATCATTGTCACCACCTTCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCAGCTGATGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS CAA 90 bp | ACTGTGCCATCAGCTGCCAGCTTCTCAGCCCGCACCTCGATGTGGTaGTTGAAGGTGGTGACAATGATGTCTTCAGGGGAGAAGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TVPSAASFSARTSMW*LKVVTMMSSGEKSL Trigger: GAGAGACTTCTCCCCTGAAGACATCATTGTCACCACCTTCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCAGCTGATGGCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS TCA 72 bp | CTCCGAGTGGGGCAGCATAAAACTGCCAAAGTCGTCTaGAAACATGCTCAAAGCCTTCTCCATGGGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LRVGQHKTAKVV*KHAQSLLHGWV Trigger: GACCCACCCATGGAGAAGGCTTTGAGCATGTTTTCAGACGACTTTGGCAGTTTTATGCTGCCCCACTCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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| CDS TCA 72 bp | GATGTTGGGTCCACATCCTCTGGTAGTTGGCACTTGTaGGCAAAGGTGTTCATGACTGTGCCATCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DVGSTSSGSWHL*AKVFMTVPSAA Trigger: GGCAGCTGATGGCACAGTCATGAACACCTTTGCTCACAAGTGCCAACTACCAGAGGATGTGGACCCAACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102486.5 |
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