Pregenerated sensors for HSPB11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063172

Ensembl transcript IDs: ENSMUST00000046558.8, ENSMUST00000106749.8, ENSMUST00000152717.8

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCCCTCTGCAGAAATGCTGTGCACAGATGCAAAATGATCAAATGCTaGGACAATAATGAATCTCAAGAAAGTGGCGTAGCCATCTCGTGC	+
Preference number: 5 (lower is better) Translates to: SLCRNAVHRCKMIKC*DNNESQESGVAISC Trigger: GCACGAGATGGCTACGCCACTTTCTTGAGATTCATTATTGTCTCAGCATTTGATCATTTTGCATCTGTGCACAGCATTTCTGCAGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046558.8 ENSMUST00000106749.8 ENSMUST00000152717.8
CDS GCA 72 bp	GTTTCCGGATTCCCATCAATGATGTTTTCAGGTGGGTaGTTTTCATCACTCGATGTGGCCAGAATCACTTCT	+
Preference number: 6 (lower is better) Translates to: VSGFPSMMFSGG*FSSLDVARITS Trigger: AGAAGTGATTCTGGCCACATCGAGTGATGAAAAGCACCCACCTGAAAACATCATTGATGGGAATCCGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046558.8 ENSMUST00000106749.8 ENSMUST00000152717.8
CDS CCA 72 bp	AAAGGTTTCCGGATTCCCATCAATGATGTTTTCAGGTaGGTGCTTTTCATCACTCGATGTGGCCAGAATCAC	+
Preference number: 6 (lower is better) Translates to: KGFRIPINDVFR*VLFITRCGQNH Trigger: GTGATTCTGGCCACATCGAGTGATGAAAAGCACCCACCTGAAAACATCATTGATGGGAATCCGGAAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046558.8 ENSMUST00000106749.8 ENSMUST00000152717.8

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