Pregenerated sensors for HSPA4L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025757Ensembl transcript IDs: ENSMUST00000108086.7, ENSMUST00000203353.3, ENSMUST00000203496.3, ENSMUST00000204702.3
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCCCTCTTCTGGTGTGTCTGAGACAGCCACAGTGTACTCAT | + |
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Preference number: 1 (lower is better) Translates to: FPATTWWLTTICNGI*CPLLVCLRQPQCTH Trigger: ATGAGTACACTGTGGCTGTCTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | AAAGGCTGGTCAAGGTGGCACACACTCAATTCCAGCACTCAAGGCTaGGGCAGGAGGATTACAAATTGGAGGCCAGGCAGGACTACATAT | + |
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Preference number: 1 (lower is better) Translates to: KGWSRWHTLNSSTQG*GRRITNWRPGRTTY Trigger: ATATGTAGTCCTGCCTGGCCTCCAATTTGTAATCCTCCTGCCTCAGCCTTGAGTGCTGGAATTGAGTGTGTGCCACCTTGACCAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR GCA 90 bp | CTTAACAGCAGGATGGAAAACTTGAGGCTCCACTGGACATTCGGGTaGAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCTAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LNSRMENLRLHWTFG*RERCFFYFQPVLRN Trigger: GTTCCTTAGGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGAGCCTCAAGTTTTCCATCCTGCTGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | CAGGATGTATCTCTCAGCTACTTCTCCGGCACCATCCTGCCTGCCTaGCACCATGCAAATAAACTCAACTCTGAAACTATAAGCAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: QDVSLSYFSGTILPA*HHANKLNSETISKP Trigger: GGGCTTGCTTATAGTTTCAGAGTTGAGTTTATTTGCATGGTGTCAGGCAGGCAGGATGGTGCCGGAGAAGTAGCTGAGAGATACATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | CTTAAAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTaGTGCCCTCTTCTGGTGTGTCTGAGACAGCCACAGTGTACTCAT | + |
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Preference number: 1 (lower is better) Translates to: LKATTWWLTTICNGI*CPLLVCLRQPQCTH Trigger: ATGAGTACACTGTGGCTGTCTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR CCA 90 bp | GGAGCAGATGGCTTGAGGCAGGTTTCTCTGTATTGCCTGGTGTCTTaGAACTTGCTCTGTAAATCAGGCTTACCTCAAACTCAGGGATCT | + |
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Preference number: 1 (lower is better) Translates to: GADGLRQVSLYCLVS*NLLCKSGLPQTQGS Trigger: AGATCCCTGAGTTTGAGGTAAGCCTGATTTACAGAGCAAGTTCCAAGACACCAGGCAATACAGAGAAACCTGCCTCAAGCCATCTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR CCA 90 bp | CTAGAGCCCAGAACTGGTTTGAGGAAGATTACAAGGATTAGGAGGTaGGGTCTTTTGAAGGAAGTGCATTACTGGGGGTGGACCTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: LEPRTGLRKITRIRR*GLLKEVHYWGWTLK Trigger: CTTCAAGGTCCACCCCCAGTAATGCACTTCCTTCAAAAGACCCCACCTCCTAATCCTTGTAATCTTCCTCAAACCAGTTCTGGGCTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | ACTATAAAAACTGAACCAAGTCTGTCGGCATCACAGATGTGCACCTaGGCAGGTCAACAGTGCTTCCCCATAGGCTTAGCATTAGTGTCG | + |
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Preference number: 1 (lower is better) Translates to: TIKTEPSLSASQMCT*AGQQCFPIGLALVS Trigger: CGACACTAATGCTAAGCCTATGGGGAAGCACTGTTGACCTGCTCAGGTGCACATCTGTGATGCCGACAGACTTGGTTCAGTTTTTATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | TCCTTCCATCTCCACTCCTGGGTACCTACTCTCTATCTTGTAGCATaGGTTCCTTTCTTCCCTTCCTCCCTCCTTTCCTTCCTTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SFHLHSWVPTLYLVA*VPFFPSSLLSFLSL Trigger: AAGAGAAAGGAAGGAAAGGAGGGAGGAAGGGAAGAAAGGAACTCATGCTACAAGATAGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | TACTTTTGTCCCAACATTCAGGAGACAGAGGCAGGAGGATCTCTGTaGGGCAAGTGTGGTTTATATAGTGAGTGTTTCATTTCAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: YFCPNIQETEAGGSL*GKCGLYSECFISGQ Trigger: CTGTCCTGAAATGAAACACTCACTATATAAACCACACTTGCCTCACAGAGATCCTCCTGCCTCTGTCTCCTGAATGTTGGGACAAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | TCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTaGGACAGCCACAGTGTACTCATATACATAAATCTTAAAGCAACC | + |
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Preference number: 1 (lower is better) Translates to: SQPSVMGSDALFWCV*DSHSVLIYINLKAT Trigger: GGTTGCTTTAAGATTTATGTATATGAGTACACTGTGGCTGTCTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | TGGAGTGGAGTCCCTTTGTACATGGTTGTAATAATGGTTGTGAGATaGCTGGAAGACTGTTTACCAGAACTGGACAATCTAGCTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: WSGVPLYMVVIMVVR*LEDCLPELDNLAQF Trigger: AAACTGAGCTAGATTGTCCAGTTCTGGTAAACAGTCTTCCAGTCATCTCACAACCATTATTACAACCATGTACAAAGGGACTCCACTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | AACATTAAACTATTTGAAAGTAACTTAACAGCAGGATGGAAAACTTaGGGCTCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: NIKLFESNLTAGWKT*GSTGHSGAGRDVSS Trigger: AGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGAGCCTCAAGTTTTCCATCCTGCTGTTAAGTTACTTTCAAATAGTTTAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | GATTATTTATGTAATGACAAGACTGGATTCCTGGTGGCGCATCAGTaGGATGGTCTAGGATGTCAGAACCTCCCATTTGTTGTAATATTT | + |
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Preference number: 1 (lower is better) Translates to: DYLCNDKTGFLVAHQ*DGLGCQNLPFVVIF Trigger: AAATATTACAACAAATGGGAGGTTCTGACATCCTAGACCATCTCACTGATGCGCCACCAGGAATCCAGTCTTGTCATTACATAAATAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | AAAGATTTAGCTTTGGGAAAACAACGAGCCTCTGAAAATTGTAACTaGAGTTGGACTTCAGTTAAGACCATTAGGAACACAAGGGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KDLALGKQRASENCN*SWTSVKTIRNTRAH Trigger: ATGGGCCCTTGTGTTCCTAATGGTCTTAACTGAAGTCCAACTTCAGTTACAATTTTCAGAGGCTCGTTGTTTTCCCAAAGCTAAATCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | CTAGGAATTGAACCTTGGTCCTTGGGGAAGAACAACCAGTACTCTTaGCTGTTGAGTTATCTTTCCAGATCCAAGAATTTTGTGTACTTT | + |
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Preference number: 1 (lower is better) Translates to: LGIEPWSLGKNNQYS*LLSYLSRSKNFVYF Trigger: AAAGTACACAAAATTCTTGGATCTGGAAAGATAACTCAACAGTCAAGAGTACTGGTTGTTCTTCCCCAAGGACCAAGGTTCAATTCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | TTGAACCTTGGTCCTTGGGGAAGAACAACCAGTACTCTTGACTGTTaGGTTATCTTTCCAGATCCAAGAATTTTGTGTACTTTAAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LNLGPWGRTTSTLDC*VIFPDPRILCTLKR Trigger: TCTCTTTAAAGTACACAAAATTCTTGGATCTGGAAAGATAACTCAACAGTCAAGAGTACTGGTTGTTCTTCCCCAAGGACCAAGGTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | GCATCAGATGGTCATGATTTAGTTACTATGTTTGGCTCCTTGACTTaGAAGCTCCCATTTCAATATATTGTTAACAAATATGTCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: ASDGHDLVTMFGSLT*KLPFQYIVNKYVPA Trigger: GGCAGGGACATATTTGTTAACAATATATTGAAATGGGAGCTTTCAAGTCAAGGAGCCAAACATAGTAACTAAATCATGACCATCTGATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR TCA 90 bp | TGCAGACTACATTGTAGGAACAAAATCTCTATTAGAGAACTCATTTaGGAAATGACTATCCCTAAAGATAGTATACTCTCGGTCTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: CRLHCRNKISIRELI*EMTIPKDSILSVFS Trigger: GCTAAAGACCGAGAGTATACTATCTTTAGGGATAGTCATTTCTCAAATGAGTTCTCTAATAGAGATTTTGTTCCTACAATGTAGTCTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTTCAAACTCAGGGATCTaGTTGCCTCGCCTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: MATGKFRLLPSPLLGTYSSNSGI*LPRLLS Trigger: ACTGAGGAGGCGAGGCAAGCAGATCCCTGAGTTTGA...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTGTCCCTTGAAAACTaGAACATCACCCCAGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: MATGKFRLLPSPLLGTYSLSLEN*NITPAY Trigger: GTAGGCTGGGGTGATGTTTCAGTTTTCAAGGGACAG...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCAAAATTCCTGCAAAATaGCCACCCTACCCTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: STGHSGAGRDVSSTSNRSKIPAK*PPYPPL Trigger: TAGAGGAGGGTAGGGTGGTCATTTTGCAGGAATTTT...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGACTTGCTTCTGTCCCTTaGAAACTGAAACATCACCCC | + |
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Preference number: 2 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRLASVP*KLKHHP Trigger: GGGGTGATGTTTCAGTTTTCAAGGGACAGAAGCAAG...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCCTGACTAAAAATTCCTaGAAAATGACCACCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: STGHSGAGRDVSSTSNRSLTKNS*KMTTLP Trigger: GGGTAGGGTGGTCATTTTGCAGGAATTTTTAGTCAG...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGACTCTATCTTGTAGCATaGGTTCCTTTCTTCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRLYLVA*VPFFPS Trigger: GGAAGGGAAGAAAGGAACTCATGCTACAAGATAGAG...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCAACAAAAGCAGCCAATaGTGCTGTTATCTGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: STGHSGAGRDVSSTSNRSNKSSQ*CCYLNV Trigger: GACATTCAGATAACAGCAGCATTGGCTGCTTTTGTT...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTCCATGCATTTTGTCTTaGTTCTGTCCCTTGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: GHRKVQTPSISTPGYLLSPCILS*FCPLKT Trigger: AGTTTTCAAGGGACAGAAGCAAGACAAAATGCATGG...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTTATTGCCTGGTGTCTTaGAACTTGCTCTGTAAATCA | + |
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Preference number: 2 (lower is better) Translates to: GHRKVQTPSISTPGYLLSYCLVS*NLLCKS Trigger: TGATTTACAGAGCAAGTTCCAAGACACCAGGCAATA...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGATGGTGTCTTGGAACTTaGTCTGTAAATCAGGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRWCLGT*SVNQAY Trigger: GTAAGCCTGATTTACAGAGCAAGTTCCAAGACACCA...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGAAGTGAAAAGTTCCTCTaGGAAAACATGAATCCATGC | + |
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Preference number: 2 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRSEKFL*ENMNPC Trigger: GCATGGATTCATGTTTTCTCAGAGGAACTTTTCACT...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGGCAGGATGGAAAACTTaGGGCTCCACTGGACATTCG | + |
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Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMAGWKT*GSTGHS Trigger: CGAATGTCCAGTGGAGCCTCAAGTTTTCCATCCTGC...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGCAGCGAGGCTGCTTTTaGAGTCGTACAAGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: ELQILTVRFSIKKETKGWQRGCF*SRTRLA Trigger: AGCCAGCCTTGTACGACTGCAAAAGCAGCCTCGCTG...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGATTATTTCCTAGGACTTaGTACAGGTACTCCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRLFPRT*YRYSFQ Trigger: TTGAAAGGAGTACCTGTACCAAGTCCTAGGAAATAA...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR CAA 90 bp | GTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTaGTACATCTATATTCAGCTAGGGCTTCACAGCAGCAATGGACAG | + |
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Preference number: 2 (lower is better) Translates to: VLHTDTKYVRRAQTD*YIYIQLGLHSSNGQ Trigger: CTGTCCATTGCTGCTGTGAAGCCCTAGCTGAATATAGATGTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | CCCATAGGCTTAGCATTAGTGTCGCAGCAGCTGGTCTTTTGGACAAGTAGATCAGTAGTTAAGAACAACTaGACATATGTTGTGTGTACC | + |
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Preference number: 2 (lower is better) Translates to: PIGLALVSQQLVFWTSRSVVKNN*TYVVCT Trigger: GGTACACACAACATATGTTCAGTTGTTCTTAACTAC...TGATCTACTTGTCCAAAAGACCAGCTGCTGCGACACTAATGCTAAGCCTATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTTCACAGATGTGCACCTaGGCAGGTCAACAGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: NRERGYQLLEPDSISTFLSQMCT*AGQQCF Trigger: GAAGCACTGTTGACCTGCTCAGGTGCACATCTGTGA...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTCCAGCACTCAAGGCTaGGGCAGGAGGATTACAAAT | + |
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Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMSSTQG*GRRITN Trigger: ATTTGTAATCCTCCTGCCTCAGCCTTGAGTGCTGGA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGGCAACAAAAGAGCAATaGAGTGCCCCCTTCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ELQILTVRFSIKKETKGWATKEQ*SAPFLH Trigger: ATGCAGGAAGGGGGCACTGCATTGCTCTTTTGTTGC...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR GCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGGAACACAAGGGCCCATaGATTTTGTCTTGCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMEHKGP*ILSCFC Trigger: ACAGAAGCAAGACAAAATGCATGGGCCCTTGTGTTC...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGGCTTCACAGCAGCAATaGACAGCAATAGTGTACTCA | + |
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Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMASQQQ*TAIVYS Trigger: TGAGTACACTATTGCTGTCCATTGCTGCTGTGAAGC...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTTATGCAGACCTGACTaGCCTGAACTCAAGAAACCT | + |
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Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMLCRPD*PELKKP Trigger: AGGTTTCTTGAGTTCAGGCCAGTCAGGTCTGCATAA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGAAAGCAACCACATGGTaGCTCACAACCATCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMKATTW*LTTICN Trigger: ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTTT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCACAACTATAAAAACTaGACCAAGTCTGTCGGCATC | + |
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Preference number: 2 (lower is better) Translates to: NRERGYQLLEPDSISTFLHNYKN*TKSVGI Trigger: GATGCCGACAGACTTGGTTCAGTTTTTATAGTTGTG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCAGCAGCTGGTCTTTTaGACAAGTAGATCAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: NRERGYQLLEPDSISTFLQQLVF*TSRSTV Trigger: AACTGTTGATCTACTTGTCCAAAAGACCAGCTGCTG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR CCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGACTAGAGCCCAGAACTaGTTTGAGGAAGATTACAAG | + |
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Preference number: 2 (lower is better) Translates to: ELQILTVRFSIKKETKGWTRAQN*FEEDYK Trigger: CTTGTAATCTTCCTCAAACCAGTTCTGGGCTCTAGT...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| 3UTR-3UTR TCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTTCCTCTGAGAAAACATaGATCCATGCTACCAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: NRERGYQLLEPDSISTFLSSEKT*IHATNK Trigger: TTTGTTGGTAGCATGGATTCATGTTTTCTCAGAGGA...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR TCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGAGTACTCTTGACTGTTaGGTTATCTTTCCAGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: ELQILTVRFSIKKETKGWSTLDC*VIFPDP Trigger: TGGATCTGGAAAGATAACTCAACAGTCAAGAGTACT...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGCTATGTTTAGTGGTTTaGATGAGAATGGTTCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMLCLVV*MRMVPI Trigger: TATGGGAACCATTCTCATTCAAACCACTAAACATAG...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGAAAAGCAGCCAATGCTaGTGTTATCTGAATGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMKSSQC*CYLNVK Trigger: TTTGACATTCAGATAACAGCAGCATTGGCTGCTTTT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR GCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTGAAAACATGAATCCATaGTACCAACAAAAGCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: NRERGYQLLEPDSISTFLENMNP*YQQKQP Trigger: TGGCTGCTTTTGTTGGTAGCATGGATTCATGTTTTC...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CAA 90 bp | CTTAACATTCTAGAAGCCCCTTTACTGTCTAAAATAACTAAGAATTaGGCTATGTTTAGTGGTTTGAATGAGAATGGTTCCCATAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LNILEAPLLSKITKN*AMFSGLNENGSHRL Trigger: GAGCCTATGGGAACCATTCTCATTCAAACCACTAAACATAGCCAAATTCTTAGTTATTTTAGACAGTAAAGGGGCTTCTAGAATGTTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | TCAAGGTGGCACACACTCAATTCCAGCACTCAAGGCTaGGGCAGGAGGATTACAAATTGGAGGCCAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRWHTLNSSTQG*GRRITNWRPGR Trigger: CCTGCCTGGCCTCCAATTTGTAATCCTCCTGCCTCAGCCTTGAGTGCTGGAATTGAGTGTGTGCCACCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR GCA 72 bp | CCTCTGCAACAAAAGAGCAATGCAGTGCCCCCTTCCTaGATCGAGGAGCTGAGGGCTATGCAAGTAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLQQKSNAVPPS*IEELRAMQVEA Trigger: AGCTTCTACTTGCATAGCCCTCAGCTCCTCGATGCAGGAAGGGGGCACTGCATTGCTCTTTTGTTGCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | ACTGAACCAAGTCTGTCGGCATCACAGATGTGCACCTaGGCAGGTCAACAGTGCTTCCCCATAGGCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TEPSLSASQMCT*AGQQCFPIGLA Trigger: TGCTAAGCCTATGGGGAAGCACTGTTGACCTGCTCAGGTGCACATCTGTGATGCCGACAGACTTGGTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR GCA 72 bp | CAGGGAGCAGATGGCTTGAGGCAGGTTTCTCTGTATTaGCTGGTGTCTTGGAACTTGCTCTGTAAATCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGADGLRQVSLY*LVSWNLLCKSG Trigger: GCCTGATTTACAGAGCAAGTTCCAAGACACCAGGCAATACAGAGAAACCTGCCTCAAGCCATCTGCTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTCCCATGCATTTTGTCTaGCTTCTGTCCCTTGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GHRKVQTPSISTPGYLLSPMHFV*LLSLEN Trigger: GTTTTCAAGGGACAGAAGCAAGACAAAATGCATGGG...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR GCA 72 bp | CCTGACTGGCCTGAACTCAAGAAACCTGTTTGCCTCTaGTTAAGGAGTGCTAGGATAAAAGGCATTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PDWPELKKPVCL*LRSARIKGICH Trigger: GTGGCAAATGCCTTTTATCCTAGCACTCCTTAAGCAGAGGCAAACAGGTTTCTTGAGTTCAGGCCAGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGAACTCAGGGATCTGCTaGCCTCGCCTCCTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMNSGIC*PRLLSP Trigger: AGGACTGAGGAGGCGAGGCAAGCAGATCCCTGAGTT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | TGTAATGACAAGACTGGATTCCTGGTGGCGCATCAGTaGGATGGTCTAGGATGTCAGAACCTCCCATTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CNDKTGFLVAHQ*DGLGCQNLPFV Trigger: AACAAATGGGAGGTTCTGACATCCTAGACCATCTCACTGATGCGCCACCAGGAATCCAGTCTTGTCATTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | TCTCTCAGCTACTTCTCCGGCACCATCCTGCCTGCCTaGCACCATGCAAATAAACTCAACTCTGAAACTATA | + |
|
Preference number: 3 (lower is better) Translates to: SLSYFSGTILPA*HHANKLNSETI Trigger: TATAGTTTCAGAGTTGAGTTTATTTGCATGGTGTCAGGCAGGCAGGATGGTGCCGGAGAAGTAGCTGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR GCA 72 bp | GGCAGGTTTCTCTGTATTGCCTGGTGTCTTGGAACTTaGTCTGTAAATCAGGCTTACCTCAAACTCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GRFLCIAWCLGT*SVNQAYLKLRD Trigger: ATCCCTGAGTTTGAGGTAAGCCTGATTTACAGAGCAAGTTCCAAGACACCAGGCAATACAGAGAAACCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR GCA 72 bp | TGCAGACCTGACTGGCCTGAACTCAAGAAACCTGTTTaGCTCTGCTTAAGGAGTGCTAGGATAAAAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: CRPDWPELKKPV*LCLRSARIKGI Trigger: AATGCCTTTTATCCTAGCACTCCTTAAGCAGAGGCAAACAGGTTTCTTGAGTTCAGGCCAGTCAGGTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CCA 72 bp | GGCTTGAGGCAGGTTTCTCTGTATTGCCTGGTGTCTTaGAACTTGCTCTGTAAATCAGGCTTACCTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: GLRQVSLYCLVS*NLLCKSGLPQT Trigger: AGTTTGAGGTAAGCCTGATTTACAGAGCAAGTTCCAAGACACCAGGCAATACAGAGAAACCTGCCTCAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | CTATTTGAAAGTAACTTAACAGCAGGATGGAAAACTTaGGGCTCCACTGGACATTCGGGTGCAGGGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LFESNLTAGWKT*GSTGHSGAGRD Trigger: ATCTCTCCCTGCACCCGAATGTCCAGTGGAGCCTCAAGTTTTCCATCCTGCTGTTAAGTTACTTTCAAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | CCCAACATTCAGGAGACAGAGGCAGGAGGATCTCTGTaGGGCAAGTGTGGTTTATATAGTGAGTGTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: PNIQETEAGGSL*GKCGLYSECFI Trigger: AATGAAACACTCACTATATAAACCACACTTGCCTCACAGAGATCCTCCTGCCTCTGTCTCCTGAATGTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCAGGGAGCAGATGGCTaGAGGCAGGTTTCTCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NRERGYQLLEPDSISTFLQGADG*RQVSLY Trigger: ATACAGAGAAACCTGCCTCAAGCCATCTGCTCCCTG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTATGTGAATGAATGTTaGCCTGAGGTGCCTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMYVNEC*PEVPAG Trigger: CCCAGCAGGCACCTCAGGCAAACATTCATTCACATA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | TCTGTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTaGGACAGCCACAGTGTACTCATATACATAAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVMGSDALFWCV*DSHSVLIYINL Trigger: AAGATTTATGTATATGAGTACACTGTGGCTGTCTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | GTTAACAGTGGCTTCCTTCCTCCCAAATCTAAGAGATaGCCATTTCATGTTAGGACTCTCCTTCTAAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: VNSGFLPPKSKR*PFHVRTLLLRH Trigger: GTGTCTTAGAAGGAGAGTCCTAACATGAAATGGTCATCTCTTAGATTTGGGAGGAAGGAAGCCACTGTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGAGCAGGATGGAAAACTaGAGGCTCCACTGGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: ELQILTVRFSIKKETKGWSRMEN*RLHWTF Trigger: GAATGTCCAGTGGAGCCTCAAGTTTTCCATCCTGCT...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | GGTCCTTGGGGAAGAACAACCAGTACTCTTGACTGTTaGGTTATCTTTCCAGATCCAAGAATTTTGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: GPWGRTTSTLDC*VIFPDPRILCT Trigger: AGTACACAAAATTCTTGGATCTGGAAAGATAACTCAACAGTCAAGAGTACTGGTTGTTCTTCCCCAAGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | GAACCTTGGTCCTTGGGGAAGAACAACCAGTACTCTTaGCTGTTGAGTTATCTTTCCAGATCCAAGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: EPWSLGKNNQYS*LLSYLSRSKNF Trigger: AAAATTCTTGGATCTGGAAAGATAACTCAACAGTCAAGAGTACTGGTTGTTCTTCCCCAAGGACCAAGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CCA 72 bp | TTGCTAGAATCATCCTTAAGAATCCAGTTAGCTAACTaGAGAGATGGCTCAGCAGTTAAGAACACTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLESSLRIQLAN*RDGSAVKNTGF Trigger: GAAACCAGTGTTCTTAACTGCTGAGCCATCTCTCCAGTTAGCTAACTGGATTCTTAAGGATGATTCTAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGCTGGTGTCTTGGAACTaGCTCTGTAAATCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMLVSWN*LCKSGL Trigger: TAAGCCTGATTTACAGAGCAAGTTCCAAGACACCAG...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGATAGGAAATAATCACTaGATACCCACCTCCAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMIGNNH*IPTSNP Trigger: TGGGTTGGAGGTGGGTATCAAGTGATTATTTCCTAT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | GCTTTGGGAAAACAACGAGCCTCTGAAAATTGTAACTaGAGTTGGACTTCAGTTAAGACCATTAGGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: ALGKQRASENCN*SWTSVKTIRNT Trigger: TGTGTTCCTAATGGTCTTAACTGAAGTCCAACTTCAGTTACAATTTTCAGAGGCTCGTTGTTTTCCCAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | GTCCCTTTGTACATGGTTGTAATAATGGTTGTGAGATaGCTGGAAGACTGTTTACCAGAACTGGACAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: VPLYMVVIMVVR*LEDCLPELDNL Trigger: TAGATTGTCCAGTTCTGGTAAACAGTCTTCCAGTCATCTCACAACCATTATTACAACCATGTACAAAGGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CCA 72 bp | ACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTaGTCAAGGTGGCACACACTCAATTCCAGCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TVRFSIKKETKG*SRWHTLNSSTQ Trigger: TTGAGTGCTGGAATTGAGTGTGTGCCACCTTGACCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | ACCATGGATATGACTGCATCTTGCATCAGATGGTCATaGTTTAGTTACTATGTTTGGCTCCTTGACTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TMDMTASCIRWS*FSYYVWLLDLK Trigger: TTTCAAGTCAAGGAGCCAAACATAGTAACTAAATCATGACCATCTGATGCAAGATGCAGTCATATCCATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGTATAAAGATTTAGCTTaGGGAAAACAACGAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELQILTVRFSIKKETKGWYKDLA*GKQRAS Trigger: AGAGGCTCGTTGTTTTCCCAAAGCTAAATCTTTATA...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTTTTCACTATGTATCATaGACTGGTCTAAAGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NRERGYQLLEPDSISTFLFHYVS*TGLKLL Trigger: AAGGAGCTTTAGACCAGTCAATGATACATAGTGAAA...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGTTCCTTTTATATGAGTaGTCTTTGTCATGGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ELQILTVRFSIKKETKGWFLLYE*SLSWCL Trigger: GAGACACCATGACAAAGACAACTCATATAAAAGGAA...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR TCA 72 bp | CTCTTTACAGCAATAGAACAGTGTACTAACACATCATaGAACTTAACAAAGATTTGGCAGTACTGTAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LFTAIEQCTNTS*NLTKIWQYCKS Trigger: GGACTTACAGTACTGCCAAATCTTTGTTAAGTTTCATGATGTGTTAGTACACTGTTCTATTGCTGTAAAGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CCA 72 bp | ATACTTAACAGACAACATTCACAAACTGACTTCTTTTaGTCCAGAACCACTTCAATGCCACTATTAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ILNRQHSQTDFF*SRTTSMPLLKL Trigger: CAGTTTTAATAGTGGCATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTTGGCGATGGTCTCGATaGCGCCGCTCCTCGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: MATGKFRLLPSPLLGTYSWRWSR*RRSSLQ Trigger: CTGTAGCGAGGAGCGGCGGCATCGAGACCATCGCCA...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTGCCTGCAACCTGGGCTaGGGCCATCACGGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MATGKFRLLPSPLLGTYSACNLG*GHHGSS Trigger: AGAAGATCCGTGATGGCCGCAGCCCAGGTTGCAGGC...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCATCTGGGCTGGTCTCTaGACCACTCTGTCCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: STGHSGAGRDVSSTSNRSIWAGL*TTLSVH Trigger: ATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGAT...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCAAGGTGGTTCAACCCTaGCTAAGAGGGAAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: STGHSGAGRDVSSTSNRSKVVQP*LRGKHT Trigger: TGTGTGCTTCCCTCTTAGCCAGGGTTGAACCACCTT...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTGAGAATGGGGCCGGGTaGTTCTTAGAGAAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHRKVQTPSISTPGYLLSENGAG*FLEKTS Trigger: TGAAGTCTTCTCTAAGAACCACCCGGCCCCATTCTC...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTGTCAATCTCCTCTTCTaGGGTGTGCTCAGCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHRKVQTPSISTPGYLLSVNLLF*GVLSMT Trigger: TGTCATGCTGAGCACACCCCAGAAGAGGAGATTGAC...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCCCTGCCACCCAAATATaGGTCAAAGGTAGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: STGHSGAGRDVSSTSNRSPATQI*VKGSSQ Trigger: TTGGCTACTACCTTTGACCCATATTTGGGTGGCAGG...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTCAATGGCTCGAGTTCTaGATCCCAAAGATATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHRKVQTPSISTPGYLLSQWLEF*IPKIYR Trigger: CCTGTATATCTTTGGGATCCAGAACTCGAGCCATTG...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTAATGGGGTCATCAAATaGTCGCCCATGAAGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHRKVQTPSISTPGYLLSNGVIK*SPMKLF Trigger: AAAAAGCTTCATGGGCGATCATTTGATGACCCCATT...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | CCCATAGGCTTAGCATTAGTGTCGCAGCAGCTGGTCTTTTGGACAAGTAGATCAAGTTTTTCACACTCCTaGTACAGCCGCAACAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIGLALVSQQLVFWTSRSSFSHS*YSRNKA Trigger: GGCCTTGTTGCGGCTGTATCAGGAGTGTGAAAAACT...TGATCTACTTGTCCAAAAGACCAGCTGCTGCGACACTAATGCTAAGCCTATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCCCACGGGATCTTGAGTaGGACTTAATTTATTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STGHSGAGRDVSSTSNRSPRDLE*DLIYSV Trigger: CACAGAATAAATTAAGTCTCACTCAAGATCCCGTGG...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGACCAGTGCAACTGCAGTaGTTTCATTCATCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRPVQLQ*FHSSAS Trigger: TGAGGCTGATGAATGAAACCACTGCAGTTGCACTGG...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACGCTTTGGCCCCGGTGTaGTCAATCTCCTCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYALAPV*SISSSG Trigger: CCCAGAAGAGGAGATTGACCACACCGGGGCCAAAGC...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGACATTCAGGGTGGTACTaGTGTCTTTCAGAAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRHSGWY*CLSERT Trigger: GGTTCTTTCTGAAAGACATCAGTACCACCCTGAATG...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCCTTATAAATTCCATATaGCAGTGCAACTGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STGHSGAGRDVSSTSNRSLINSI*QCNCSG Trigger: ACCACTGCAGTTGCACTGGCATATGGAATTTATAAG...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACCTGCAGGAATCCGTGTaGCCCCTCCCACAATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYLQESV*PLPQSL Trigger: TAGAGATTGTGGGAGGGGCCACACGGATTCCTGCAG...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTGTCACCATCAGACTGTaGGAAAACATTCTGAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHRKVQTPSISTPGYLLSVTIRL*ENILNS Trigger: ACTATTCAGAATGTTTTCCCACAGTCTGATGGTGAC...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | CCCATAGGCTTAGCATTAGTGTCGCAGCAGCTGGTCTTTTGGACAAGTAGATCACATCAAGGTCATTCATaGAACACTCGATGTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PIGLALVSQQLVFWTSRSHQGHS*NTRCSG Trigger: CCCTGAACATCGAGTGTTTCATGAATGACCTTGATG...TGATCTACTTGTCCAAAAGACCAGCTGCTGCGACACTAATGCTAAGCCTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTTGCCCAATTTGTCTCTaGAATCATAGACGTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHRKVQTPSISTPGYLLSCPICL*NHRRIL Trigger: AAGAATACGTCTATGATTTCAGAGACAAATTGGGCA...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGCACCTGCTCCTTGACTaGAGGAATCCGTGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELQILTVRFSIKKETKGWHLLLD*RNPCGP Trigger: GGGGCCACACGGATTCCTGCAGTCAAGGAGCAGGTG...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTTTAGGCCTGCAACCTaGGCTGCGGCCATCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMFRPAT*AAAITD Trigger: ATCCGTGATGGCCGCAGCCCAGGTTGCAGGCCTAAA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CAA 72 bp | AAAGGGTCAGTGCTGGTGGCTCTAAACCACATCGGTTaGTTTCACAATAATAATGCAGTTACCCCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGSVLVALNHIG*FHNNNAVTPCL Trigger: GAGGCAGGGGGTAACTGCATTATTATTGTGAAACAAACCGATGTGGTTTAGAGCCACCAGCACTGACCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGGCTCGTACGGAAGCCTaGTCCTCTCCGTTTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMARTEA*SSPFAQ Trigger: TTGTGCAAACGGAGAGGATCAGGCTTCCGTACGAGC...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACCTGCTTCTCAATTACTaGCGCACTGGCCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYLLLNY*RTGHTE Trigger: TTCAGTGTGGCCAGTGCGTCAGTAATTGAGAAGCAG...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTAGTTCATGGAGTCACTaGTGTACTTTTCAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MATGKFRLLPSPLLGTYSSSWSH*CTFQLF Trigger: AAAGAGTTGAAAAGTACATCAGTGACTCCATGAACT...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGCAGCGATGTAGCAGTTaGGGAAGCCGAGGTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMQRCSS*GSRGQC Trigger: GCATTGACCTCGGCTTCCTCAACTGCTACATCGCTG...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGACTCCCACAATCTCTATaGTGTTTATGTCTTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRLPQSL*CLCLHV Trigger: AACGTGAAGACATAAACAGCATAGAGATTGTGGGAG...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | CCCATAGGCTTAGCATTAGTGTCGCAGCAGCTGGTCTTTTGGACAAGTAGATCATCACCTTCCAGATTCTaGTTCTCAATTACTGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: PIGLALVSQQLVFWTSRSSPSRF*FSITDA Trigger: TGCGTCAGTAATTGAGAAGCAGAATCTGGAAGGTGA...TGATCTACTTGTCCAAAAGACCAGCTGCTGCGACACTAATGCTAAGCCTATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGACTTCTACTTTTGGTTTaGGCTTATAAACGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRLLLLV*AYKRWG Trigger: ACCCCATCGTTTATAAGCCCAAACCAAAAGTAGAAG...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGATATACAGGCCGGCGTaGACCTGTCGCTGTACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ELQILTVRFSIKKETKGWIYRPA*TCRCTR Trigger: ACGAGTACAGCGACAGGTGCACGCCGGCCTGTATAT...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACTATCTGGCTCTTAGCTaGATTTCCAATGGCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYYLALS*ISNGSS Trigger: ACTCGAGCCATTGGAAATGCAGCTAAGAGCCAGATA...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACCCTCATCAAAGTTCCTaGCACCCAAATATGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYPHQSS*HPNMGQ Trigger: TTGACCCATATTTGGGTGGCAGGAACTTTGATGAGG...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACACTTTCAGGACAAGCTaGATCTTTTTCCCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYTFRTS*IFFPKS Trigger: TGACTTGGGGAAAAAGATTCAGCTTGTCCTGAAAGT...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGAACATCCCAGTGACTTaGTCAATTGCAAAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ELQILTVRFSIKKETKGWNIPVT*SIAKGR Trigger: GCGGCCCTTTGCAATTGAGCAAGTCACTGGGATGTT...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACTCCATTGGTCCATTGTaGTCACTACCAGTTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYSIGPL*SLPVFA Trigger: AGCAAAAACTGGTAGTGAGCACAATGGACCAATGGA...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | CCCATAGGCTTAGCATTAGTGTCGCAGCAGCTGGTCTTTTGGACAAGTAGATCACTTATTCATGTCTTCTaGAGTGATGAACTTTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PIGLALVSQQLVFWTSRSLIHVF*SDELFV Trigger: TACGAAAAGTTCATCACTCCAGAAGACATGAATAAG...TGATCTACTTGTCCAAAAGACCAGCTGCTGCGACACTAATGCTAAGCCTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CAA 72 bp | ACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTaGTACATCTATATTCAGCTAGGGCTTCACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDTKYVRRAQTD*YIYIQLGLHSS Trigger: GCTGCTGTGAAGCCCTAGCTGAATATAGATGTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTGCGATCTTGCTTATCTaGAGGAGGTGCCTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLAILLI*RRCLCF Trigger: AAAGCAAAGGCACCTCCTTCAGATAAGCAAGATCGC...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTTCTCCGTTTGCACAATaGGGTCATCAAATGATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLSPFAQ*GHQMIA Trigger: GGCGATCATTTGATGACCCCATTGTGCAAACGGAGA...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTACTTTAAATGCTGGTaGGAGAATCGCACACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMYFKCW*ENRTLQ Trigger: TTGCAGTGTGCGATTCTCTCACCAGCATTTAAAGTA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GCAGTCCTGCATACTGACACAAAGTATGTAAGGAGAGCTCAAACTGATTTGTACTTTCAATGTAACTATTaGGAAGGTCTTGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVLHTDTKYVRRAQTDLYFQCNY*EGLESA Trigger: AGCTGACTCAAGACCTTCTCAATAGTTACATTGAAA...GTACAAATCAGTTTGAGCTCTCCTTACATACTTTGTGTCAGTATGCAGGACTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTTCCACGTACTTCATTTaGATGGGCTGGCCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLSTYFI*MGWPYF Trigger: GAAATATGGCCAGCCCATTCAAATGAAGTACGTGGA...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTCAGCAGGATCCAGATaGTCATATCTTTCATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMSAGSR*SYLSSL Trigger: CAAGGATGAAAGATATGATCATCTGGATCCTGCTGA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGCTGATCCTCTCCGTTTaGACAATGGGGTCATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELQILTVRFSIKKETKGWLILSV*TMGSSN Trigger: ATTTGATGACCCCATTGTGCAAACGGAGAGGATCAG...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CAA 72 bp | CCCCCAACTCAACACTTCCTTTTATATGAGTTGTCTTaGTCATGGTGTCTCTTTACAGCAATAGAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTQHFLLYELS*SWCLFTAIEQC Trigger: ACACTGTTCTATTGCTGTAAAGAGACACCATGACAAAGACAACTCATATAAAAGGAAGTGTTGAGTTGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| 3UTR CAA 72 bp | AGCAAGCCCCCAACTCAACACTTCCTTTTATATGAGTaGTCTTTGTCATGGTGTCTCTTTACAGCAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKPPTQHFLLYE*SLSWCLFTAIE Trigger: TTCTATTGCTGTAAAGAGACACCATGACAAAGACAACTCATATAAAAGGAAGTGTTGAGTTGGGGGCTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGCACAACTGCTCAAATTaGGCCCTGTTCATCTTACTA | + |
|
Preference number: 4 (lower is better) Translates to: ELQILTVRFSIKKETKGWHNCSN*ALFILL Trigger: TAGTAAGATGAACAGGGCTCAATTTGAGCAGTTGTG...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTTCTTCCACCTTAATGTaGCTGAGTAAGGAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLSSTLM*LSKEQG Trigger: ACCTTGTTCCTTACTCAGTCACATTAAGGTGGAAGA...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCTCACTACCAGTTTTTaGTTTGTCTTCAGGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLLTTSF*FVFRSF Trigger: GAAGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGACATTTGTGACTATCTaGCTCTTAGCTGCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMTFVTI*LLAAFP Trigger: TGGAAATGCAGCTAAGAGCCAGATAGTCACAAATGT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR TCA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGCTTTGTAACTATTTCTaGCACTTTTACCACGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELQILTVRFSIKKETKGWLCNYF*HFYHGI Trigger: GATCCCGTGGTAAAAGTGTCAGAAATAGTTACAAAG...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR GCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTAATTCCATATGCCAGTaGAACTGCAGTGGTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLNSICQ*NCSGFI Trigger: AATGAAACCACTGCAGTTGCACTGGCATATGGAATT...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTGAAGTTTCCAATTCTTaGATCAGGATAAGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLEVSNS*IRIRHF Trigger: GAAGTGCCTTATCCTGATCCAAGAATTGGAAACTTC...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGTGGGCTTATAAACGATaGGGTTACAGAAATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMWAYKR*GYRNYP Trigger: TGGATAATTTCTGTAACCCCATCGTTTATAAGCCCA...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGAGGAGCTTCTACTTTTaGTTTGGGCTTATAAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMRSFYF*FGLIND Trigger: ATCGTTTATAAGCCCAAACCAAAAGTAGAAGCTCCT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
||
| CDS-3UTR CCA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCGTACTTCATTTGAATaGGCTGGCCATATTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NRERGYQLLEPDSISTFLRTSFE*AGHISL Trigger: TAAAGAAATATGGCCAGCCCATTCAAATGAAGTACG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS CCA 90 bp | CTCCGGAGTCGGTGTGCTGTGAGCTTCCTTTGGGTGGATCTGGGCTaGTCTCTGAACCACTCTGTCCGTCCATTGGTCCATTGTGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRSRCAVSFLWVDLG*SLNHSVRPLVHCAH Trigger: GTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGATCCACCCAAAGGAAGCTCACAGCACACCGACTCCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CCA 90 bp | AGTCCACTTCCATCTCTCCGGAGTCGGTGTGCTGTGAGCTTCCTTTaGGTGGATCTGGGCTGGTCTCTGAACCACTCTGTCCGTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLPSLRSRCAVSFL*VDLGWSLNHSVRPL Trigger: CAATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGATCCACCCAAAGGAAGCTCACAGCACACCGACTCCGGAGAGATGGAAGTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTTGCTGTGAGCTTCCTTaGGGTGGATCTGGGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MATGKFRLLPSPLLGTYSCCELP*GGSGLV Trigger: GACCAGCCCAGATCCACCCAAAGGAAGCTCACAGCA...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS GCA 90 bp | TCCAGGTACCGCACCTTAACACCTGTACTTCCATTAGGCATCTTCTaGAGCTCGTACGGAAGCCTGATCCTCTCCGTTTGCACAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRYRTLTPVLPLGIF*SSYGSLILSVCTMG Trigger: CCCCATTGTGCAAACGGAGAGGATCAGGCTTCCGTACGAGCTGCAGAAGATGCCTAATGGAAGTACAGGTGTTAAGGTGCGGTACCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS GCA 90 bp | TGCAAAGGGCCGCTCTTCTTCCAGGTACCGCACCTGGCTCTTAGCTaGATTTCCAATGGCTCGAGTTCTGGATCCCAAAGATATACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CKGPLFFQVPHLALS*ISNGSSSGSQRYTG Trigger: GCCTGTATATCTTTGGGATCCAGAACTCGAGCCATTGGAAATGCAGCTAAGAGCCAGGTGCGGTACCTGGAAGAAGAGCGGCCCTTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203496.3 |
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| CDS GCA 90 bp | GGTCTCTTTAAGCTTAGCCAGCAACATCCCAGTGACTTGCTCAATTaGAAAGGGCCGCTCTTCTTCCAGGTACCGCACCTGGCTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFKLSQQHPSDLLN*KGPLFFQVPHLALS Trigger: GCTAAGAGCCAGGTGCGGTACCTGGAAGAAGAGCGGCCCTTTGCAATTGAGCAAGTCACTGGGATGTTGCTGGCTAAGCTTAAAGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203496.3 |
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| CDS CCA 90 bp | AGGAGGTGCCTTTGCTTTGGCCCCGGTGTGGTCAATCTCCTCTTCTaGGGTGTGCTCAGCATGACATTTCTGATGACCTCCTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRCLCFGPGVVNLLF*GVLSMTFLMTSFFL Trigger: CAAGAAGAAGGAGGTCATCAGAAATGTCATGCTGAGCACACCCCAGAAGAGGAGATTGACCACACCGGGGCCAAAGCAAAGGCACCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCCAACATCCCAGTGACTaGCTCAATTGCAAAGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STGHSGAGRDVSSTSNRSQHPSD*LNCKGP Trigger: CGGCCCTTTGCAATTGAGCAAGTCACTGGGATGTTG...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS GCA 90 bp | GGTCTCTTTAAGCTTAGCCAGCAACATCCCAGTGACTTGCTCAATTaGAAAGGGCCGCTCTTCTTCCAGGTACCGCACCTTAACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLFKLSQQHPSDLLN*KGPLFFQVPHLNTC Trigger: ACAGGTGTTAAGGTGCGGTACCTGGAAGAAGAGCGGCCCTTTGCAATTGAGCAAGTCACTGGGATGTTGCTGGCTAAGCTTAAAGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS TCA 90 bp | TTGCCTTCACTCTTAGGAGCTTCCGTCTCCATAGCGGCATCGTTATaGTCACCTTCCAGATTCTGCTTCTCAATTACTGACGCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSLLGASVSIAASL*SPSRFCFSITDALA Trigger: GGCCAGTGCGTCAGTAATTGAGAAGCAGAATCTGGAAGGTGATCATAACGATGCCGCTATGGAGACGGAAGCTCCTAAGAGTGAAGGCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CCA 90 bp | TTTGATTTATGCGATCTTGCTTATCTGAAGGAGGTGCCTTTGCTTTaGCCCCGGTGTGGTCAATCTCCTCTTCTGGGGTGTGCTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FDLCDLAYLKEVPLL*PRCGQSPLLGCAQH Trigger: ATGCTGAGCACACCCCAGAAGAGGAGATTGACCACACCGGGGCCAAAGCAAAGGCACCTCCTTCAGATAAGCAAGATCGCATAAATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS TCA 90 bp | GATCGAGATCACACAGTCAGCCACTGGCTTCTTCAGAGCATTTTCTaGGGTCTCTTTAAGCTTAGCCAGCAACATCCCAGTGACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DRDHTVSHWLLQSIF*GLFKLSQQHPSDLL Trigger: GAGCAAGTCACTGGGATGTTGCTGGCTAAGCTTAAAGAGACCTCAGAAAATGCTCTGAAGAAGCCAGTGGCTGACTGTGTGATCTCGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000203496.3 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | TCCACTGGACATTCGGGTGCAGGGAGAGATGTTTCTTCTACTTCCAACCGGTCCACACAACTGCTCAAATaGAGCCCTGTTCATCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: STGHSGAGRDVSSTSNRSTQLLK*SPVHLT Trigger: AGTAAGATGAACAGGGCTCAATTTGAGCAGTTGTGT...GGACCGGTTGGAAGTAGAAGAAACATCTCTCCCTGCACCCGAATGTCCAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | ACCACTCTGTCAAGGTCTCCCACATTTTCAGGTGGATTTCTCCTCAGCCACAGATTGTCCACATCCTCTTaGCCTTCACTCTTAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTLSRSPTFSGGFLLSHRLSTSS*PSLLGA Trigger: AGCTCCTAAGAGTGAAGGCAAAGAGGATGTGGACAA...TCTGTGGCTGAGGAGAAATCCACCTGAAAATGTGGGAGACCTTGACAGAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | GGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTCTCTACCAGTTTTTGCTTaGTCTTCAGGAGCTTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: GHRKVQTPSISTPGYLLSLPVFA*SSGAST Trigger: AGTAGAAGCTCCTGAAGACAAAGCAAAAACTGGTAG...AGAGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTGCTCACTACCAGTTTTaGCTTTGTCTTCAGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MATGKFRLLPSPLLGTYSAHYQF*LCLQEL Trigger: AAGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAGC...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS TCA 90 bp | AGGAACAAGGTCAGTTATGGAAAATTCACGTACTTTAAATGCTGGTaGGAGAATCGCACACTGCAACGCACATCCTCGGGCGACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNKVSYGKFTYFKCW*ENRTLQRTSSGDSF Trigger: GAAGCTGTCGCCCGAGGATGTGCGTTGCAGTGTGCGATTCTCTCACCAGCATTTAAAGTACGTGAATTTTCCATAACTGACCTTGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS GCA 90 bp | TCTGGGCTGGTCTCTGAACCACTCTGTCCGTCCATTGGTCCATTGTaGTCACTACCAGTTTTTGCTTTGTCTTCAGGAGCTTCTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGLVSEPLCPSIGPL*SLPVFALSSGASTF Trigger: AAAAGTAGAAGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CCA 90 bp | GGTTCCTTCTTGTGGAAAGTTATGACCTTTGAGAATGGGGCCGGGTaGTTCTTAGAGAAGACTTCACATTCCCCAGTCCCTTCTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSFLWKVMTFENGAG*FLEKTSHSPVPSSK Trigger: TTTTGAAGAAGGGACTGGGGAATGTGAAGTCTTCTCTAAGAACCACCCGGCCCCATTCTCAAAGGTCATAACTTTCCACAAGAAGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | ATGGCCACAGGAAAGTTCAGACTCCTTCCATCTCCACTCCTGGGTACCTACTCTGCCCGCGAGTTCTCTTaGACATTTATCTTATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: MATGKFRLLPSPLLGTYSAREFS*TFILYL Trigger: CAAATATAAGATAAATGTCAAAGAGAACTCGCGGGC...AGAGTAGGTACCCAGGAGTGGAGATGGAAGGAGTCTGAACTTTCCTGTGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGGGAGGTGCCTTTGCTTaGGCCCCGGTGTGGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: ELQILTVRFSIKKETKGWGGAFA*APVWSI Trigger: GATTGACCACACCGGGGCCAAAGCAAAGGCACCTCC...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCTGAAGGAGGTGCCTTaGCTTTGGCCCCGGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NRERGYQLLEPDSISTFLLKEVP*LWPRCG Trigger: ACCACACCGGGGCCAAAGCAAAGGCACCTCCTTCAG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS TCA 90 bp | AGCGGCATCGTTATGATCACCTTCCAGATTCTGCTTCTCAATTACTaGCGCACTGGCCACACTGAAGATTCCATGGATATTAATACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGIVMITFQILLLNY*RTGHTEDSMDINTN Trigger: GTTCGTATTAATATCCATGGAATCTTCAGTGTGGCCAGTGCGTCAGTAATTGAGAAGCAGAATCTGGAAGGTGATCATAACGATGCCGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | CTTAACAGACAACATTCACAAACTGACTTCTTTTGGTCCAGAACCACTTCAATGATGACCTCCTTCTTCTaGGTCAACCTGCATTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNRQHSQTDFFWSRTTSMMTSFF*VNLHFV Trigger: GACAAAATGCAGGTTGACCAAGAAGAAGGAGGTCAT...CATTGAAGTGGTTCTGGACCAAAAGAAGTCAGTTTGTGAATGTTGTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS TCA 90 bp | TATTCTGTGCATTCATCTTACTGTTTAGCCAGTTCATGGAGTCACTaGTGTACTTTTCAACTCTTTCCATTTCAGCAGGATCCAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: YSVHSSYCLASSWSH*CTFQLFPFQQDPDD Trigger: ATCATCTGGATCCTGCTGAAATGGAAAGAGTTGAAAAGTACATCAGTGACTCCATGAACTGGCTAAACAGTAAGATGAATGCACAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | AACCGAGAAAGAGGGTACCAATTATTAGAACCAGACTCTATAAGTACCTTTCTTCAGGAGCTTCTACTTTaGGTTTGGGCTTATAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: NRERGYQLLEPDSISTFLQELLL*VWAYKR Trigger: TCGTTTATAAGCCCAAACCAAAAGTAGAAGCTCCTG...AAGAAAGGTACTTATAGAGTCTGGTTCTAATAATTGGTACCCTCTTTCTCGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS CCA 90 bp | TTCTGCTTCTCAATTACTGACGCACTGGCCACACTGAAGATTCCATaGATATTAATACGAACTTTAACTTTTACTTTAGAACTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FCFSITDALATLKIP*ILIRTLTFTLELSP Trigger: TGGTGACAGTTCTAAAGTAAAAGTTAAAGTTCGTATTAATATCCATGGAATCTTCAGTGTGGCCAGTGCGTCAGTAATTGAGAAGCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGCTGTGTCTTCTAACATaGCAGACAGCTTATTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: ELQILTVRFSIKKETKGWLCLLT*QTAYSC Trigger: ACATGAATAAGCTGTCTGCAATGTTAGAAGACACAG...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS-3UTR CAA 90 bp | GAACTCCAAATCCTGACTGTAAGGTTTAGTATTAAAAAGGAAACAAAAGGCTGGTCATATCTTTCATCCTaGTTTCTGTGTGCTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: ELQILTVRFSIKKETKGWSYLSS*FLCASI Trigger: GATAGAAGCACACAGAAACAAGGATGAAAGATATGA...CCAGCCTTTTGTTTCCTTTTTAATACTAAACCTTACAGTCAGGATTTGGAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204702.3 |
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| CDS TCA 90 bp | TCCTTTGACTTTGTAACTATTTCTGACACTTTTACCACGGGATCTTaGGTGAGACTTAATTTATTCTGTGCATTCATCTTACTGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFDFVTISDTFTTGS*VRLNLFCAFILLFS Trigger: GCTAAACAGTAAGATGAATGCACAGAATAAATTAAGTCTCACTCAAGATCCCGTGGTAAAAGTGTCAGAAATAGTTACAAAGTCAAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | GGGCTGCGGCCATCACGGATCTTCTCTCTGCGTCGGTaGAAAAGCTCGGGATCGAGATCACACAGTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLRPSRIFSLRR*KSSGSRSHSQP Trigger: TGGCTGACTGTGTGATCTCGATCCCGAGCTTTTTCACCGACGCAGAGAGAAGATCCGTGATGGCCGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000203496.3 ENSMUST00000204702.3 |
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| CDS CCA 72 bp | CCATCTCTCCGGAGTCGGTGTGCTGTGAGCTTCCTTTaGGTGGATCTGGGCTGGTCTCTGAACCACTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSLRSRCAVSFL*VDLGWSLNHSV Trigger: GACAGAGTGGTTCAGAGACCAGCCCAGATCCACCCAAAGGAAGCTCACAGCACACCGACTCCGGAGAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS GCA 72 bp | TGCAACCTGGGCTGCGGCCATCACGGATCTTCTCTCTaGGTCGGTGAAAAAGCTCGGGATCGAGATCACACA | + |
|
Preference number: 6 (lower is better) Translates to: CNLGCGHHGSSL*VGEKARDRDHT Trigger: TGTGTGATCTCGATCCCGAGCTTTTTCACCGACGCAGAGAGAAGATCCGTGATGGCCGCAGCCCAGGTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000203496.3 ENSMUST00000204702.3 |
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| CDS CAA 72 bp | TCCATCTCTCCGGAGTCGGTGTGCTGTGAGCTTCCTTaGGGTGGATCTGGGCTGGTCTCTGAACCACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SISPESVCCELP*GGSGLVSEPLC Trigger: ACAGAGTGGTTCAGAGACCAGCCCAGATCCACCCAAAGGAAGCTCACAGCACACCGACTCCGGAGAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CCA 72 bp | TGCGATCTTGCTTATCTGAAGGAGGTGCCTTTGCTTTaGCCCCGGTGTGGTCAATCTCCTCTTCTGGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CDLAYLKEVPLL*PRCGQSPLLGC Trigger: ACACCCCAGAAGAGGAGATTGACCACACCGGGGCCAAAGCAAAGGCACCTCCTTCAGATAAGCAAGATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS GCA 72 bp | CGCACCTTAACACCTGTACTTCCATTAGGCATCTTCTaGAGCTCGTACGGAAGCCTGATCCTCTCCGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTLTPVLPLGIF*SSYGSLILSVC Trigger: GCAAACGGAGAGGATCAGGCTTCCGTACGAGCTGCAGAAGATGCCTAATGGAAGTACAGGTGTTAAGGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CAA 90 bp | CTTTGGGTGGATCTGGGCTGGTCTCTGAACCACTCTGTCCGTCCATaGGTCCATTGTGCTCACTACCAGTTTTTGCTTTGTCTTCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LWVDLGWSLNHSVRP*VHCAHYQFLLCLQE Trigger: CTCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGATCCACCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CAA 90 bp | GGATCTGGGCTGGTCTCTGAACCACTCTGTCCGTCCATTGGTCCATaGTGCTCACTACCAGTTTTTGCTTTGTCTTCAGGAGCTTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: GSGLVSEPLCPSIGP*CSLPVFALSSGAST Trigger: AGTAGAAGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CAA 72 bp | GATTTATGCGATCTTGCTTATCTGAAGGAGGTGCCTTaGCTTTGGCCCCGGTGTGGTCAATCTCCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLCDLAYLKEVP*LWPRCGQSPLL Trigger: CAGAAGAGGAGATTGACCACACCGGGGCCAAAGCAAAGGCACCTCCTTCAGATAAGCAAGATCGCATAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CAA 72 bp | GATCTGGGCTGGTCTCTGAACCACTCTGTCCGTCCATaGGTCCATTGTGCTCACTACCAGTTTTTGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: DLGWSLNHSVRP*VHCAHYQFLLC Trigger: ACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGACCAGCCCAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS GCA 72 bp | GTCTCTGAACCACTCTGTCCGTCCATTGGTCCATTGTaGTCACTACCAGTTTTTGCTTTGTCTTCAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSEPLCPSIGPL*SLPVFALSSGA Trigger: AGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CCA 72 bp | TTGTGGAAAGTTATGACCTTTGAGAATGGGGCCGGGTaGTTCTTAGAGAAGACTTCACATTCCCCAGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LWKVMTFENGAG*FLEKTSHSPVP Trigger: AGGGACTGGGGAATGTGAAGTCTTCTCTAAGAACCACCCGGCCCCATTCTCAAAGGTCATAACTTTCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CAA 72 bp | TCTTCTTGGTCAACCTGCATTTTGTCCACATCCTCTTaGCCTTCACTCTTAGGAGCTTCCGTCTCCATAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSWSTCILSTSS*PSLLGASVSIA Trigger: CGCTATGGAGACGGAAGCTCCTAAGAGTGAAGGCAAAGAGGATGTGGACAAAATGCAGGTTGACCAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CAA 72 bp | CTGGTCTCTGAACCACTCTGTCCGTCCATTGGTCCATaGTGCTCACTACCAGTTTTTGCTTTGTCTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LVSEPLCPSIGP*CSLPVFALSSG Trigger: TCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGACAGAGTGGTTCAGAGACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CAA 90 bp | TTCTGGGGTGTGCTCAGCATGACATTTCTGATGACCTCCTTCTTCTaGGTCAACCTGCATTTTGTCCACATCCTCTTTGCCTTCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: FWGVLSMTFLMTSFF*VNLHFVHILFAFTL Trigger: AAGAGTGAAGGCAAAGAGGATGTGGACAAAATGCAGGTTGACCAAGAAGAAGGAGGTCATCAGAAATGTCATGCTGAGCACACCCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | GTCAGTTATGGAAAATTCACGTACTTTAAATGCTGGTaGGAGAATCGCACACTGCAACGCACATCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: VSYGKFTYFKCW*ENRTLQRTSSG Trigger: GCCCGAGGATGTGCGTTGCAGTGTGCGATTCTCTCACCAGCATTTAAAGTACGTGAATTTTCCATAACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | CTCTTAGGAGCTTCCGTCTCCATAGCGGCATCGTTATaGTCACCTTCCAGATTCTGCTTCTCAATTACTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLGASVSIAASL*SPSRFCFSITD Trigger: GTCAGTAATTGAGAAGCAGAATCTGGAAGGTGATCATAACGATGCCGCTATGGAGACGGAAGCTCCTAAGAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS GCA 72 bp | TCCGTCCATTGGTCCATTGTGCTCACTACCAGTTTTTaGTTTGTCTTCAGGAGCTTCTACTTTTGGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SVHWSIVLTTSF*FVFRSFYFWFG Trigger: CCCAAACCAAAAGTAGAAGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CAA 72 bp | GTCCGTCCATTGGTCCATTGTGCTCACTACCAGTTTTaGCTTTGTCTTCAGGAGCTTCTACTTTTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRPLVHCAHYQF*LCLQELLLLVW Trigger: CCAAACCAAAAGTAGAAGCTCCTGAAGACAAAGCAAAAACTGGTAGTGAGCACAATGGACCAATGGACGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | TTCAAATGGTTCCTTCTTGTGGAAAGTTATGACCTTTaGGAATGGGGCCGGGTGGTTCTTAGAGAAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: FKWFLLVESYDL*EWGRVVLREDF Trigger: GAAGTCTTCTCTAAGAACCACCCGGCCCCATTCTCAAAGGTCATAACTTTCCACAAGAAGGAACCATTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CCA 72 bp | CTTGATCCATTACTGATTTTAAAGGTGGTTCAACCCTaGCTAAGAGGGAAGCACACAACTGCTCAAATTGAG | + |
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Preference number: 6 (lower is better) Translates to: LDPLLILKVVQP*LRGKHTTAQIE Trigger: CTCAATTTGAGCAGTTGTGTGCTTCCCTCTTAGCCAGGGTTGAACCACCTTTAAAATCAGTAATGGATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | GCATTATCATCTTCCCCTCATTTTCAATGTAACTATTaGGAAGGTCTTGAGTCAGCTGTCTGTAGAGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: ALSSSPHFQCNY*EGLESAVCRGY Trigger: GTAGCCTCTACAGACAGCTGACTCAAGACCTTCTCAATAGTTACATTGAAAATGAGGGGAAGATGATAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | CAGTCCCTTCTTCAAAAGAAGTCTTCCACCTTAATGTaGCTGAGTAAGGAACAAGGTCAGTTATGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: QSLLQKKSSTLM*LSKEQGQLWKI Trigger: AATTTTCCATAACTGACCTTGTTCCTTACTCAGTCACATTAAGGTGGAAGACTTCTTTTGAAGAAGGGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS TCA 72 bp | TACTTTTCAACTCTTTCCATTTCAGCAGGATCCAGATaGTCATATCTTTCATCCTTGTTTCTGTGTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: YFSTLSISAGSR*SYLSSLFLCAS Trigger: AGAAGCACACAGAAACAAGGATGAAAGATATGATCATCTGGATCCTGCTGAAATGGAAAGAGTTGAAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108086.7 ENSMUST00000204702.3 |
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| CDS CCA 72 bp | TGGGAAAACATTCTGAATAGTGAAGTTTCCAATTCTTaGATCAGGATAAGGCACTTCATGCAAATTAGTATA | + |
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Preference number: 6 (lower is better) Translates to: WENILNSEVSNS*IRIRHFMQISI Trigger: TATACTAATTTGCATGAAGTGCCTTATCCTGATCCAAGAATTGGAAACTTCACTATTCAGAATGTTTTCCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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| CDS CCA 72 bp | TCAATTACTGACGCACTGGCCACACTGAAGATTCCATaGATATTAATACGAACTTTAACTTTTACTTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SITDALATLKIP*ILIRTLTFTLE Trigger: TTCTAAAGTAAAAGTTAAAGTTCGTATTAATATCCATGGAATCTTCAGTGTGGCCAGTGCGTCAGTAATTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108086.7 ENSMUST00000203353.3 ENSMUST00000204702.3 |
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