Pregenerated sensors for HSPA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020361Ensembl transcript IDs: ENSMUST00000020630.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCGCTCTGCACTCTCCTAGTGTTAATCCATGCTTGGCCATCCTaGCCCTCAGAAATGGAGAAAGCACCAGCCCCACAACCCCACAGG | + |
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Preference number: 1 (lower is better) Translates to: AALCTLLVLIHAWPS*PSEMEKAPAPQPHR Trigger: CCTGTGGGGTTGTGGGGCTGGTGCTTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR GCA 90 bp | GAGAGCAGGCTCTGCTGCGCTCTGCACTCTCCTAGTGTTAATCCATaGTTGGCCATCCTGACCCTCAGAAATGGAGAAAGCACCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: ESRLCCALHSPSVNP*LAILTLRNGESTSP Trigger: GGGGCTGGTGCTTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGCAGAGCCTGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR GCA 90 bp | ACATTTGGCCTGGGGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTaGTCACATAAGCATGCATTCCTTCCTTTCCAACTGCCTCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: TFGLGFQACTERESS*SHKHAFLPFQLPLE Trigger: CTCTAGAGGCAGTTGGAAAGGAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACCCCAGGCCAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR TCA 90 bp | GACAGTCAGTTGCATAAGAGCTGGCTTAATCCTGCAGCCTGCATTTaGAAAAGCTCTTGGCCTCAGAGCAAGGCCAGTGGGAACTCTTAC | + |
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Preference number: 1 (lower is better) Translates to: DSQLHKSWLNPAACI*KSSWPQSKASGNSY Trigger: GTAAGAGTTCCCACTGGCCTTGCTCTGAGGCCAAGAGCTTTTTCAAATGCAGGCTGCAGGATTAAGCCAGCTCTTATGCAACTGACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR GCA 90 bp | CGAGCGGGTCAGGGTACAAATCTTTCCACCATACTAAGGATGGACTaGTCAGATTTACCATGCCTACACCCAACTGTGTTATTTACAACC | + |
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Preference number: 1 (lower is better) Translates to: RAGQGTNLSTILRMD*SDLPCLHPTVLFTT Trigger: GGTTGTAAATAACACAGTTGGGTGTAGGCATGGTAAATCTGAGCAGTCCATCCTTAGTATGGTGGAAAGATTTGTACCCTGACCCGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR TCA 90 bp | CCTGTGTGGACAGACAGATGCATAGTGATTCTAACTATGCATGGTTaGACCCTATTTCCAACAAGCAAAAATAAACAGAGGCTCTGTTAC | + |
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Preference number: 1 (lower is better) Translates to: PVWTDRCIVILTMHG*TLFPTSKNKQRLCY Trigger: GTAACAGAGCCTCTGTTTATTTTTGCTTGTTGGAAATAGGGTTCAACCATGCATAGTTAGAATCACTATGCATCTGTCTGTCCACACAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 90 bp | AGCAGGCTCTGCTGCGCTCTGCACTCTCCTAGTGTTAATCCATGCTaGGCCATCCTGACCCTCAGAAATGGAGAAAGCACCAGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: SRLCCALHSPSVNPC*AILTLRNGESTSPT Trigger: TGTGGGGCTGGTGCTTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGCAGAGCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCCCTGACCCTCAGAAATaGAGAAAGCACCAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRPVLSGSPAAHISMHSFPDPQK*RKHQPH Trigger: GTGGGGCTGGTGCTTTCTCCATTTCTGAGGGTCAGG...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCTCAGAGCAAGGCCAGTaGGAACTCTTACAGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPSEQGQ*ELLQHS Trigger: TGAGTGCTGTAAGAGTTCCCACTGGCCTTGCTCTGA...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCAATGAGGTGTTCTTGTaGCCTTGGGCACCTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GSRPVLSGSPAAHISMHSNEVFL*PWAPCL Trigger: AAGACAAGGTGCCCAAGGTCACAAGAACACCTCATT...GGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTGAGAGCAGGCTCTGCTaGGCTCTGCACTCTCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: STLVCRTSLSCRLAPGVCESRLC*ALHSPS Trigger: ACTAGGAGAGTGCAGAGCGCAGCAGAGCCTGCTCTC...ACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 90 bp | CTAAGGCAGGTAACCAGCTCTGACCTCTACTGCAGGCATCCACCCTaGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: LRQVTSSDLYCRHPP*FAEHLFPVDWPQEY Trigger: ATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGGTGGATGCCTGCAGTAGAGGTCAGAGCTGGTTACCTGCCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCATGAAGAGAGAACAGTaGACTTCATCTCTGGATCTA | + |
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Preference number: 2 (lower is better) Translates to: GSRPVLSGSPAAHISMHSMKREQ*TSSLDL Trigger: TAGATCCAGAGATGAAGTGCACTGTTCTCTCTTCAT...GGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGTCGGCAATGAGGTGTTCTTGTGACCTTGGGCACCTTGTCTTTTATACCCATGCTTGGCCATCCTaGCCCTCAGAAATGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQSAMRCSCDLGHLVFYTHAWPS*PSEMEK Trigger: TTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATG...GGTATAAAAGACAAGGTGCCCAAGGTCACAAGAACACCTCATTGCCGACTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 90 bp | TCACATAAGCATGCATTCCTTCCTTTCCAACTGCCTCTAGAGCACTaGAGAGCTATAGCACTTCCTGTGTGGACAGACAGATGCATAGTG | + |
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Preference number: 2 (lower is better) Translates to: SHKHAFLPFQLPLEH*RAIALPVWTDRCIV Trigger: CACTATGCATCTGTCTGTCCACACAGGAAGTGCTATAGCTCTCAAGTGCTCTAGAGGCAGTTGGAAAGGAAGGAATGCATGCTTATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 90 bp | GTTCTTGTGACCTTGGGCACCTTGTCTTTTATACCAATTTCAGACTaGTCCAGGGCAACGCAGTGCAATAGCTTTACAATCTGTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLVTLGTLSFIPISD*SRATQCNSFTICQL Trigger: CAGCTGACAGATTGTAAAGCTATTGCACTGCGTTGCCCTGGACAAGTCTGAAATTGGTATAAAAGACAAGGTGCCCAAGGTCACAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGACTTGTCCAGGGCAACGCAGTGCAATAGCTTTACAATCTGTCAGCTGTTTAGGTCCCCTAAAAACTaGCTAAGAAATCTCCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: SDLSRATQCNSFTICQLFRSPKN*LRNLQY Trigger: ATACTGGAGATTTCTTAGTCAGTTTTTAGGGGACCT...AAACAGCTGACAGATTGTAAAGCTATTGCACTGCGTTGCCCTGGACAAGTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCATTCAAACTTCTAATTTACATACATCTACCACCACTCGAGCGGGTCAGGATACTAAGGATGGACTaGTCAGATTTACCATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: VPFKLLIYIHLPPLERVRILRMD*SDLPCL Trigger: TAGGCATGGTAAATCTGAGCAGTCCATCCTTAGTAT...CCTGACCCGCTCGAGTGGTGGTAGATGTATGTAAATTAGAAGTTTGAATGGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR GCA 72 bp | CTGGGGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTaGTCACATAAGCATGCATTCCTTCCTTTCCAACTG | + |
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Preference number: 3 (lower is better) Translates to: LGFQACTERESS*SHKHAFLPFQL Trigger: CAGTTGGAAAGGAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR TCA 72 bp | TTTCCTGTAGACTGGCCCCAGGAGTATGTGGTGCCCTaGCACTGGCTTCAGTCGGCAATGAGGTGTTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: FPVDWPQEYVVP*HWLQSAMRCSC Trigger: ACAAGAACACCTCATTGCCGACTGAAGCCAGTGTCAGGGCACCACATACTCCTGGGGCCAGTCTACAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR GCA 72 bp | CTCTGCTGCGCTCTGCACTCTCCTAGTGTTAATCCATaGTTGGCCATCCTGACCCTCAGAAATGGAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LCCALHSPSVNP*LAILTLRNGES Trigger: GCTTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCTGCAGGCATCCACCCTaGTTTGCAGAACATCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SRPVLSGSPAAHISMHSFCRHPP*FAEHLF Trigger: AAAGAGATGTTCTGCAAACAAGGGTGGATGCCTGCA...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR TCA 72 bp | TGCACTCTCCTAGTGTTAATCCATGCTTGGCCATCCTaGCCCTCAGAAATGGAGAAAGCACCAGCCCCACAA | + |
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Preference number: 3 (lower is better) Translates to: CTLLVLIHAWPS*PSEMEKAPAPQ Trigger: TTGTGGGGCTGGTGCTTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CCA 72 bp | AAACACTTGTTTGCACACAAGTCATCAGTTGCCATCTaGCCAGCCTCCACATACATCCAATCGGTCTACAGA | + |
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Preference number: 3 (lower is better) Translates to: KHLFAHKSSVAI*PASTYIQSVYR Trigger: TCTGTAGACCGATTGGATGTATGTGGAGGCTGGCCAGATGGCAACTGATGACTTGTGTGCAAACAAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR TCA 72 bp | ACAGACAGATGCATAGTGATTCTAACTATGCATGGTTaGACCCTATTTCCAACAAGCAAAAATAAACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TDRCIVILTMHG*TLFPTSKNKQR Trigger: CCTCTGTTTATTTTTGCTTGTTGGAAATAGGGTTCAACCATGCATAGTTAGAATCACTATGCATCTGTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCATCTCCCGGTCCAGCTaGCAGAGCAGCTGGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPISRSS*QSSWLS Trigger: TGAGAGCCAGCTGCTCTGGCAGCTGGACCGGGAGAT...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAATGGAGAAAGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGGCAGCTGGCTCTCAATaGGCAGGTCCACAGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEMEKAPAPQPHRQRMLVAAGSQ*AGPQCW Trigger: CCAGCACTGTGGACCTGCCCATTGAGAGCCAGCTGC...CACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCTTTCTCCATTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCTGCTGCGCTCTGCACTCTCCTAGTGTTAATCCATGCTTGGCCATCCTGAGCTGCCAGAGCAGCTaGCTCTCAATGGGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RLCCALHSPSVNPCLAILSCQSS*LSMGRS Trigger: GGACCTGCCCATTGAGAGCCAGCTGCTCTGGCAGCT...CAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGCAGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCGACCAGCAATCTGTGTaGCATCCATCACTGACCGCC | + |
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Preference number: 4 (lower is better) Translates to: GSRPVLSGSPAAHISMHSDQQSV*HPSLTA Trigger: GGCGGTCAGTGATGGATGCCACACAGATTGCTGGTC...GGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCCCTGGGTTGTCTCCTTaGCCATCCACTGGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: GSRPVLSGSPAAHISMHSPGLSP*PSTGPF Trigger: GAATGGACCAGTGGATGGCCAAGGAGACAACCCAGG...GGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | AGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGGTGATCTCCACCTAGAGCACAGCCTCGAGTaGCAGCTTCATCTGCATTTA | + |
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Preference number: 4 (lower is better) Translates to: STSPTTPQAENAGGDLHLEHSLE*QLHLHL Trigger: TAAATGCAGATGAAGCTGTCACTCGAGGCTGTGCTC...TAGGTGGAGATCACCACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | CTCTTGGCCTCAGAGCAAGGCCAGTGGGAACTCTTACAGCACTCAAGGAAGCAGGCTGGTGTCTGTGGCTaGTGCTGCTGCTCTTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LLASEQGQWELLQHSRKQAGVCG*CCCSSV Trigger: TACTGAAGAGCAGCAGCAGCAGCCACAGACACCAGC...CTGCTTCCTTGAGTGCTGTAAGAGTTCCCACTGGCCTTGCTCTGAGGCCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 72 bp | GAACTCTTACAGCACTCAAGGAAGCAGAGCATACATTaGGCCTGGGGTTCCAGGCCTGTACTGAGCGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ELLQHSRKQSIH*AWGSRPVLSGS Trigger: ACTCCCGCTCAGTACAGGCCTGGAACCCCAGGCCAAATGTATGCTCTGCTTCCTTGAGTGCTGTAAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | CCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTGGTGTGTGGCATCCATCACTaGCCGCCGTTCTGCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: PLFAEHLFPVDWPQEYVVCGIHH*PPFCIS Trigger: ACTGATGCAGAACGGCGGTCAGTGATGGATGCCACA...CACCACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCGCTCAAAGGGAGGTCTaGAGCATTCGCACTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: SRPVLSGSPAAHISMHSFAQREV*SIRTHQ Trigger: TTGATGAGTGCGAATGCTTCAGACCTCCCTTTGAGC...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCGTATGTGGTTCTTCCTaGTCCACTTGCATCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPVCGSS*STCIFS Trigger: GGAGAAGATGCAAGTGGACCAGGAAGAACCACATAC...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 72 bp | TGCTGCGCTCTGCACTCTCCTAGTGTTAATCCATGCTaGGCCATCCTGACCCTCAGAAATGGAGAAAGCACC | + |
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Preference number: 4 (lower is better) Translates to: CCALHSPSVNPC*AILTLRNGEST Trigger: GGTGCTTTCTCCATTTCTGAGGGTCAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| 3UTR CAA 72 bp | GTAACCAGCTCTGACCTCTACTGCAGGCATCCACCCTaGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTSSDLYCRHPP*FAEHLFPVDWP Trigger: GGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGGTGGATGCCTGCAGTAGAGGTCAGAGCTGGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | AGGCTCTGCTGCGCTCTGCACTCTCCTAGTGTTAATCCATGCTTGGCCATCCTGCAATCTCCTTTGTCTTaGCAACTGGATCCACCGTCA | + |
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Preference number: 4 (lower is better) Translates to: RLCCALHSPSVNPCLAILQSPLS*QLDPPS Trigger: TGACGGTGGATCCAGTTGTCAAGACAAAGGAGATTG...CAGGATGGCCAAGCATGGATTAACACTAGGAGAGTGCAGAGCGCAGCAGAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCCTTCTCCTCTTCCTTTaGATTCTGATCCGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPLLLFL*ILIRLH Trigger: ATGGAGACGGATCAGAATGCAAAGGAAGAGGAGAAG...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCTCCACTGGTCCATTCTaGTCAGCATGTTTTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SRPVLSGSPAAHISMHSFSTGPF*SACFGS Trigger: GGAACCAAAACATGCTGAGCAGAATGGACCAGTGGA...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGAGAGAACAGTGCAGGCACAGCTGTGTCTaGACCGTGCTCAGCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SDRLAGLLNRTVMKREQCRHSCV*TVLSSL Trigger: CAGGCTGCTGAGCACGGTGCAGACACAGCTGTGCCT...GCACTGTTCTCTCTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTGCCCGTTAATCCAGTaGGCAACTGCACAATATCAT | + |
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Preference number: 4 (lower is better) Translates to: GSRPVLSGSPAAHISMHSCPLIQ*ATAQYH Trigger: ATGATATTGTGCAGTTGCCCACTGGATTAACGGGCA...GGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCGTTTCGACAAAAGCATaGCAGTCACTTGTTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SRPVLSGSPAAHISMHSFVSTKA*QSLVPW Trigger: CCACGGAACAAGTGACTGCCATGCTTTTGTCGAAAC...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAATGGAGAAAGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGGAGCAGCATGGTTTTTaGGGAAGACTTCACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SEMEKAPAPQPHRQRMLVEQHGF*GRLHSH Trigger: GTGACTGTGAAGTCTTCCCCAAAAACCATGCTGCTC...CACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCTTTCTCCATTTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCCTGCTCTTCAGTATGTaGTTCTTCCTGGTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: SRPVLSGSPAAHISMHSFLLFSM*FFLVHL Trigger: CAAGTGGACCAGGAAGAACCACATACTGAAGAGCAG...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCCACCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTCGCCTTGTTTTCTGCTaGTGTCTGTGGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLVCRTSLSCRLAPGVCRLVFC*CLWLLL Trigger: CAGCAGCAGCCACAGACACCAGCAGAAAACAAGGCG...ACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACTTGTCCAGGGCAACGCAGTGCAATAGCTTTACAATCTGTCAGCTGTTTAGCAGCCTGGGAGCCTaGGTTGTCTCCTTGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SDLSRATQCNSFTICQLFSSLGA*VVSLAI Trigger: GATGGCCAAGGAGACAACCCAGGCTCCCAGGCTGCT...AAACAGCTGACAGATTGTAAAGCTATTGCACTGCGTTGCCCTGGACAAGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCCACTCATCAATTTCTTaGGTTTCTCACACTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPHSSIS*VSHTLE Trigger: CTCAAGAGTGTGAGAAACTCAAGAAATTGATGAGTG...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TCAGACTTGTCCAGGGCAACGCAGTGCAATAGCTTTACAATCTGTCAGCTGTTTACCAAAAGAAACACATaGCGGCGTGCAGCGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLSRATQCNSFTICQLFTKRNT*RRAAVA Trigger: AGCGACCGCTGCACGCCGGCATGTGTTTCTTTTGGT...AAACAGCTGACAGATTGTAAAGCTATTGCACTGCGTTGCCCTGGACAAGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTCGGCAATGAGGTGTTCTTGTGACCTTGGGCACCTTGTCTTTTATACCGGTGTCTGTGGCTGCTaGTGCTGCTCTTCAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSAMRCSCDLGHLVFYTGVCGC*CCSSVC Trigger: ACATACTGAAGAGCAGCAGCAGCAGCCACAGACACC...GGTATAAAAGACAAGGTGCCCAAGGTCACAAGAACACCTCATTGCCGACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | GAGTTCTTCATTAAGGACAGTCAGTTGCATAAGAGCTGGCTTAATCCTGCAGCCCTCCGCCTTGTTTTCTaGTGGTGTCTGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EFFIKDSQLHKSWLNPAALRLVF*WCLWLL Trigger: CAGCAGCCACAGACACCAGCAGAAAACAAGGCGGAG...GGCTGCAGGATTAAGCCAGCTCTTATGCAACTGACTGTCCTTAATGAAGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCGAGAGCTCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGAGCTATAGCAGGATCTaGATAGGGCAAATCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGESSDRLAGLLNRTVMKSYSRI*IGQILR Trigger: CCTCAGGATTTGCCCTATCCAGATCCTGCTATAGCT...CTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGAGCTCTCGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| 3UTR CAA 72 bp | TATAAGGAAAAGCCTGCCTGGTGGCTGTCGCGGCTTTaGTTAGAGCTCAGTTTCCCCAAACACACTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YKEKPAWWLSRL*LELSFPKHTSP Trigger: AGGTGAAGTGTGTTTGGGGAAACTGAGCTCTAACAAAAGCCGCGACAGCCACCAGGCAGGCTTTTCCTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTGGTGAGTGACTTTCTGAACTaGGAACTGAGCTATAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLFAEHLFPVDWPQEYVVSDFLN*ELSYSR Trigger: CCTGCTATAGCTCAGTTCTCAGTTCAGAAAGTCACT...CACCACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCATTCAAACTTCTAATTTACATACATCTACCACCACTCGAGCGGGTCAGGCGTTCACCCGGACCTTaGCTTTCACTTTTGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFKLLIYIHLPPLERVRRSPGP*LSLLSW Trigger: CCAGCTCAAAAGTGAAAGTCAAGGTCCGGGTGAACG...CCTGACCCGCTCGAGTGGTGGTAGATGTATGTAAATTAGAAGTTTGAATGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR TCA 90 bp | TCAGACTTGTCCAGGGCAACGCAGTGCAATAGCTTTACAATCTGTCAGCTGTTTTCTTCCTTTGCATTCTaGTCCGTCTCCATGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDLSRATQCNSFTICQLFSSFAF*SVSMGS Trigger: GGAGCCCATGGAGACGGATCAGAATGCAAAGGAAGA...AAACAGCTGACAGATTGTAAAGCTATTGCACTGCGTTGCCCTGGACAAGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAATGGAGAAAGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGAATCCAGTGGGCAACTaGACAATATCATATGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEMEKAPAPQPHRQRMLVNPVGN*TISYAR Trigger: TCTTGCATATGATATTGTGCAGTTGCCCACTGGATT...CACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCTTTCTCCATTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCATTCAAACTTCTAATTTACATACATCTACCACCACTCGAGCGGGTCAGGTGGGCAGGTCCACAGTaGTGGTCTTCACTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPFKLLIYIHLPPLERVRWAGPQ*WSSLLP Trigger: AGGCAAAAGTGAAGACCAGCACTGTGGACCTGCCCA...CCTGACCCGCTCGAGTGGTGGTAGATGTATGTAAATTAGAAGTTTGAATGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTGGTGGCATTAGAAATTACCTaGCTCTTAGCTGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLFAEHLFPVDWPQEYVVALEIT*LLAAAP Trigger: TGGAGCAGCAGCTAAGAGCCAGGTAATTTCTAATGC...CACCACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCTCCAAGTGTTCATACTaGTCCTCCTTGTTTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPSKCSY*SSLFLK Trigger: TTTCAAAAACAAGGAGGACCAGTATGAACACTTGGA...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| 3UTR CAA 72 bp | CATGCATTCCTTCCTTTCCAACTGCCTCTAGAGCACTaGAGAGCTATAGCACTTCCTGTGTGGACAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HAFLPFQLPLEH*RAIALPVWTDR Trigger: TCTGTCTGTCCACACAGGAAGTGCTATAGCTCTCAAGTGCTCTAGAGGCAGTTGGAAAGGAAGGAATGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCGAGAGCTCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGCTTTCTTCAGATTCCTaGAACCGTGTCTTAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGESSDRLAGLLNRTVMKLSSDS*NRVLMG Trigger: ACCCATTAAGACACGGTTCCAGGAATCTGAAGAAAG...CTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGAGCTCTCGCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTCTTCATTAAGGACAGTCAGTTGCATAAGAGCTGGCTTAATCCTGCAGCCTTTGCCTTCTTTGCTTaGGGTGGTTGGTCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFFIKDSQLHKSWLNPAAFAFFA*GGWSVF Trigger: AAAGACGGACCAACCACCTCAAGCAAAGAAGGCAAA...GGCTGCAGGATTAAGCCAGCTCTTATGCAACTGACTGTCCTTAATGAAGAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACAAACACATGCCGGCGTaGAGCGGTCGCTATACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: INRGSVTEISDYKDPEHNKHMPA*SGRYTR Trigger: ACGAGTATAGCGACCGCTGCACGCCGGCATGTGTTT...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTGGTGCTTCTTTCTTTAACTTaGATTGCTCCAAGACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFAEHLFPVDWPQEYVVLLSLT*IAPRRF Trigger: GAAGCGTCTTGGAGCAATCCAAGTTAAAGAAAGAAG...CACCACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCCAAAGATATTGGATATaGTACCACATCAGTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRPVLSGSPAAHISMHSFQRYWI*YHISDR Trigger: TCTATCACTGATGTGGTACCATATCCAATATCTTTG...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| 3UTR CAA 72 bp | ACCAGTTTGGATAATGCAACCCGGATAAACACTTGTTaGCACACAAGTCATCAGTTGCCATCTGGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLDNATRINTC*HTSHQLPSGQP Trigger: AGGCTGGCCAGATGGCAACTGATGACTTGTGTGCAAACAAGTGTTTATCCGGGTTGCATTATCCAAACTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTCTTCATTAAGGACAGTCAGTTGCATAAGAGCTGGCTTAATCCTGCAGCCTTAACCGCAAACAATTaGGACCAGCAATCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFFIKDSQLHKSWLNPAALTANN*DQQSVW Trigger: CCACACAGATTGCTGGTCTCAATTGTTTGCGGTTAA...GGCTGCAGGATTAAGCCAGCTCTTATGCAACTGACTGTCCTTAATGAAGAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | GAGAGCTATAGCACTTCCTGTGTGGACAGACAGATGCATAGTGATTCTAACTATGATCTTCTCTTTCACTaGAGGGATTCGTGTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESYSTSCVDRQMHSDSNYDLLFH*RDSCGT Trigger: GGTGCCACACGAATCCCTGCAGTGAAAGAGAAGATC...ATAGTTAGAATCACTATGCATCTGTCTGTCCACACAGGAAGTGCTATAGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | AAACAGGACCGTAATGAAGAGAGAACAGTGCACTTCATCTCTGGATCTAACTATGTCTGTGGCTGCTGCTaGTGCTCTTCAGTATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQDRNEERTVHFISGSNYVCGCC*CSSVCG Trigger: ACCACATACTGAAGAGCAGCAGCAGCAGCCACAGAC...ATAGTTAGATCCAGAGATGAAGTGCACTGTTCTCTCTTCATTACGGTCCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGAGAGAACAGTGCAAATGGATCGGAGAATaGACGCCCATGGAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDRLAGLLNRTVMKREQCKWIGE*TPMESF Trigger: AAAAGATTCCATGGGCGTGCATTCTCCGATCCATTT...GCACTGTTCTCTCTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCTATAGCACTTCCTGTGTGGACAGACAGATGCATAGTGATTCTAACTATCATCAGACTGTGGAGTaGCTTTCTGAACTGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESYSTSCVDRQMHSDSNYHQTVE*LSELRT Trigger: AGTTCTCAGTTCAGAAAGTCACTCCACAGTCTGATG...ATAGTTAGAATCACTATGCATCTGTCTGTCCACACAGGAAGTGCTATAGCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACCTTGACTTTCACTTTTaGGCTGGAGCCATCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: INRGSVTEISDYKDPEHNLDFHF*AGAIRL Trigger: CAGTCTGATGGCTCCAGCTCAAAAGTGAAAGTCAAG...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | GTCCCATTCAAACTTCTAATTTACATACATCTACCACCACTCGAGCGGGTCAGGTTCTTTAACTTGGATTaGTCCAAGACGCTTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPFKLLIYIHLPPLERVRFFNLD*SKTLRS Trigger: ACTTCGAAGCGTCTTGGAGCAATCCAAGTTAAAGAA...CCTGACCCGCTCGAGTGGTGGTAGATGTATGTAAATTAGAAGTTTGAATGGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | TCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGAGAGAACAGTGCTTGGGGGTTCCACTTTaGGTTTGGGTTTTGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SDRLAGLLNRTVMKREQCLGVPL*VWVLKL Trigger: TAATTTCAAAACCCAAACCCAAAGTGGAACCCCCAA...GCACTGTTCTCTCTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACAGCTGCTGCTCCAATTaGACGATTCTTAGGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: INRGSVTEISDYKDPEHNSCCSN*TILRTK Trigger: TTTGGTCCTAAGAATCGTTCAATTGGAGCAGCAGCT...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR TCA 90 bp | AAACAGGACCGTAATGAAGAGAGAACAGTGCACTTCATCTCTGGATCTAACTATAGTAGGCCTCAAGAGTaGAAGGTTCCTTTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQDRNEERTVHFISGSNYSRPQE*KVPFCR Trigger: TCTACAGAAAGGAACCTTTCACTCTTGAGGCCTACT...ATAGTTAGATCCAGAGATGAAGTGCACTGTTCTCTCTTCATTACGGTCCTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | TCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGAGAGAACAGTGCCCTCATCAAATTTTCTaGCTCCCAATGTTGTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDRLAGLLNRTVMKREQCPHQIF*LPMLYQ Trigger: TTGATACAACATTGGGAGGCAGAAAATTTGATGAGG...GCACTGTTCTCTCTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACTTTTGGTTCCTCCTTTaGGGGTTCCACTTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INRGSVTEISDYKDPEHNFWFLL*GFHFGF Trigger: AAACCCAAAGTGGAACCCCCAAAGGAGGAACCAAAA...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCTGTTTTAACATACAGATTGGCAGATTCAAGACACATTAACACAAAATCCTTGGCCATCCACTaGTCCATTCTGCTCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVLTYRLADSRHINTKSLAIH*SILLSM Trigger: CATGCTGAGCAGAATGGACCAGTGGATGGCCAAGGA...TTTTGTGTTAATGTGTCTTGAATCTGCCAATCTGTATGTTAAAACAGCTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR GCA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACCTTAAGAACACTCTCTaGTGTCTCCTTCAGTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: INRGSVTEISDYKDPEHNLKNTL*CLLQFR Trigger: TCGAAACTGAAGGAGACAGCAGAGAGTGTTCTTAAG...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCTGTTTTAACATACAGATTGGCAGATTCAAGACACATTAACACAAAAGCAGGTCCACAGTGCTaGTCTTCACTTTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAVLTYRLADSRHINTKAGPQC*SSLLPS Trigger: AGAAGGCAAAAGTGAAGACCAGCACTGTGGACCTGC...TTTTGTGTTAATGTGTCTTGAATCTGCCAATCTGTATGTTAAAACAGCTGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGGACCGTAATGAAGAGAGAACAGTGCACTTCATCTCTGGATCTAACTATAGTTTCTCACACTCTTaGGACAGTCGTAATAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQDRNEERTVHFISGSNYSFSHS*DSRNKA Trigger: TGCTTTATTACGACTGTCTCAAGAGTGTGAGAAACT...ATAGTTAGATCCAGAGATGAAGTGCACTGTTCTCTCTTCATTACGGTCCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAATGGAGAAAGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGGCCTGGGTTGTCTCCTaGGCCATCCACTGGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SEMEKAPAPQPHRQRMLVAWVVS*AIHWSI Trigger: AATGGACCAGTGGATGGCCAAGGAGACAACCCAGGC...CACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCTTTCTCCATTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCTCCTCAGACTCCGCCTaGTTTTCTGCTGGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRPVLSGSPAAHISMHSFSSDSA*FSAGVC Trigger: ACAGACACCAGCAGAAAACAAGGCGGAGTCTGAGGA...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGGTGATCTCCACCTATGCTGGTCTTCACTTTaGCCTTCTTTGCTTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STSPTTPQAENAGGDLHLCWSSL*PSLLEV Trigger: CACCTCAAGCAAAGAAGGCAAAAGTGAAGACCAGCA...TAGGTGGAGATCACCACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS GCA 90 bp | TCCTCAGACTCCGCCTTGTTTTCTGCTGGTGTCTGTGGCTGCTGCTaGTGCTCTTCAGTATGTGGTTCTTCCTGGTCCACTTGCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSDSALFSAGVCGCC*CSSVCGSSWSTCIF Trigger: GAAGATGCAAGTGGACCAGGAAGAACCACATACTGAAGAGCAGCAGCAGCAGCCACAGACACCAGCAGAAAACAAGGCGGAGTCTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS GCA 90 bp | ATCTCCTCAGACTCCGCCTTGTTTTCTGCTGGTGTCTGTGGCTGCTaGTGCTGCTCTTCAGTATGTGGTTCTTCCTGGTCCACTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISSDSALFSAGVCGC*CCSSVCGSSWSTCI Trigger: GATGCAAGTGGACCAGGAAGAACCACATACTGAAGAGCAGCAGCAGCAGCCACAGACACCAGCAGAAAACAAGGCGGAGTCTGAGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGGTGATCTCCACCTAAAGCATGGCAGTCACTaGTTCCGTGGTAAAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STSPTTPQAENAGGDLHLKHGSH*FRGKIP Trigger: AGGAATTTTACCACGGAACAAGTGACTGCCATGCTT...TAGGTGGAGATCACCACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTGGCCTCAGAGCAAGGCCAGTGGGAACTCTTACAGCACTCAAGGAAGCAGGGAGCAGCATGGTTTTaGGGGAAGACTTCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLASEQGQWELLQHSRKQGAAWF*GKTSQS Trigger: TGACTGTGAAGTCTTCCCCAAAAACCATGCTGCTCC...CTGCTTCCTTGAGTGCTGTAAGAGTTCCCACTGGCCTTGCTCTGAGGCCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCTCTTCCACAGCATTCTaGGCGTCATTCCGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPVLSGSPAAHISMHSFSSTAF*ASFRSF Trigger: GAAGGAACGGAATGACGCCAAGAATGCTGTGGAAGA...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAATGGAGAAAGCACCAGCCCCACAACCCCACAGGCAGAGAATGCTGGTGATCTCAGGAAGCTTCTaGTCGCCATCAGAAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SEMEKAPAPQPHRQRMLVISGSF*SPSEGT Trigger: TGTGCCTTCTGATGGCGACAAGAAGCTTCCTGAGAT...CACCAGCATTCTCTGCCTGTGGGGTTGTGGGGCTGGTGCTTTCTCCATTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTGGTGTCACTTTTGCCTTCTTaGCTTGAGGTGGTTGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLFAEHLFPVDWPQEYVVSLLPS*LEVVGP Trigger: CGGACCAACCACCTCAAGCAAAGAAGGCAAAAGTGA...CACCACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TTAAACTTCAAATTCACCCCCATCCCAGCACCCAAACCCTCCCACCCCCACCCCTTTGGGGGTTCCACTTaGGGTTTGGGTTTTGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LNFKFTPIPAPKPSHPHPFGGST*GLGFEI Trigger: AATTTCAAAACCCAAACCCAAAGTGGAACCCCCAAA...GGGGTGGGGGTGGGAGGGTTTGGGTGCTGGGATGGGGGTGAATTTGAAGTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCGAGAGCTCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGTTTTGCCTTCTTTGCTaGAGGTGGTTGGTCCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGESSDRLAGLLNRTVMKFCLLC*RWLVRL Trigger: AAGACGGACCAACCACCTCAAGCAAAGAAGGCAAAA...CTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGAGCTCTCGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCCACCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTTTCTTCCTGGTCCACTaGCATCTTCTCCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: STLVCRTSLSCRLAPGVCFFLVH*HLLLFL Trigger: AAGGAAGAGGAGAAGATGCAAGTGGACCAGGAAGAA...ACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCCTGTACTGAGCGGGAGTCCAGCTGCTCACATAAGCATGCATTCCTTCTATTCACCACTAAGCTaGTCTCTCATCTCATACACA | + |
|
Preference number: 5 (lower is better) Translates to: SRPVLSGSPAAHISMHSFYSPLS*SLISYT Trigger: TGTGTATGAGATGAGAGACAAGCTTAGTGGTGAATA...GAAGGAATGCATGCTTATGTGAGCAGCTGGACTCCCGCTCAGTACAGGCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 90 bp | GTTCTTGGCATTAGAAATTACCTGGCTCTTAGCTGCTGCTCCAATTaGACGATTCTTAGGACCAAAAGAAACACATGCCGGCGTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLGIRNYLALSCCSN*TILRTKRNTCRRAA Trigger: CGCTGCACGCCGGCATGTGTTTCTTTTGGTCCTAAGAATCGTTCAATTGGAGCAGCAGCTAAGAGCCAGGTAATTTCTAATGCCAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCCACCCTTGTTTGCAGAACATCTCTTTCCTGTAGACTGGCCCCAGGAGTATGTATTAACCGCAAACAATaGAGACCAGCAATCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: STLVCRTSLSCRLAPGVCINRKQ*RPAICV Trigger: CACACAGATTGCTGGTCTCAATTGTTTGCGGTTAAT...ACATACTCCTGGGGCCAGTCTACAGGAAAGAGATGTTCTGCAAACAAGGGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACGTGGCGGCTCCACTCTaGCTAGGAGATCATCACACA | + |
|
Preference number: 5 (lower is better) Translates to: INRGSVTEISDYKDPEHNVAAPL*LGDHHT Trigger: TGTGTGATGATCTCCTAGCAAGAGTGGAGCCGCCAC...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCGAGAGCTCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGTCTTCTTTCTTTAACTaGGATTGCTCCAAGACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGESSDRLAGLLNRTVMKSSFFN*DCSKTL Trigger: AAGCGTCTTGGAGCAATCCAAGTTAAAGAAAGAAGA...CTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGAGCTCTCGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTCTTCATTAAGGACAGTCAGTTGCATAAGAGCTGGCTTAATCCTGCAGCCTTCTGCAGGTTAAGCTaGCTATTCATCCACTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: EFFIKDSQLHKSWLNPAAFCRLS*LFIHSI Trigger: GATGGAGTGGATGAATAGCAAGCTTAACCTGCAGAA...GGCTGCAGGATTAAGCCAGCTCTTATGCAACTGACTGTCCTTAATGAAGAACTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CCA 90 bp | TGTCAGCTCCTTAATTTTAGCTTCAATCTCCTTTGTCTTGACAACTaGATCCACCGTCAGGCTCTGTTTGTTCTGCAGGTTAAGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CQLLNFSFNLLCLDN*IHRQALFVLQVKLA Trigger: AGCAAGCTTAACCTGCAGAACAAACAGAGCCTGACGGTGGATCCAGTTGTCAAGACAAAGGAGATTGAAGCTAAAATTAAGGAGCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCAGATAGACTAGCTGGGCTCTTAAACAGGACCGTAATGAAGAGAGAACAGTGCTCCATCGCAAAGATATaGGATATGGTACCACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDRLAGLLNRTVMKREQCSIAKI*DMVPHQ Trigger: CTGATGTGGTACCATATCCAATATCTTTGCGATGGA...GCACTGTTCTCTCTTCATTACGGTCCTGTTTAAGAGCCCAGCTAGTCTATCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTCTTCATTAAGGACAGTCAGTTGCATAAGAGCTGGCTTAATCCTGCAGCCCTTTGCTTGAGGTGGTaGGTCCGTCTTTTTATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EFFIKDSQLHKSWLNPAALCLRW*VRLFIF Trigger: AAAGATAAAAAGACGGACCAACCACCTCAAGCAAAG...GGCTGCAGGATTAAGCCAGCTCTTATGCAACTGACTGTCCTTAATGAAGAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 90 bp | ACAAATGGATCGGAGAATGCACGCCCATGGAATCTTTTAAAGCCTTaGACTGTGTTCTTGGCATTAGAAATTACCTGGCTCTTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TNGSENARPWNLLKP*TVFLALEITWLLAA Trigger: AGCAGCTAAGAGCCAGGTAATTTCTAATGCCAAGAACACAGTTCAAGGCTTTAAAAGATTCCATGGGCGTGCATTCTCCGATCCATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGGACCGTAATGAAGAGAGAACAGTGCACTTCATCTCTGGATCTAACTATTTCTGCCTCCCAATGTaGTATCAAAAGCTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQDRNEERTVHFISGSNYFCLPM*YQKLWP Trigger: TGGCCACAGCTTTTGATACAACATTGGGAGGCAGAA...ATAGTTAGATCCAGAGATGAAGTGCACTGTTCTCTCTTCATTACGGTCCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACTTGTCCAGGGCAACGCAGTGCAATAGCTTTACAATCTGTCAGCTGTTTCCGTCTTTTTATCTTTaGATCCAGCTTGAGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDLSRATQCNSFTICQLFPSFYL*IQLEMS Trigger: AGACATCTCAAGCTGGATCAAAAGATAAAAAGACGG...AAACAGCTGACAGATTGTAAAGCTATTGCACTGCGTTGCCCTGGACAAGTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGGACCGTAATGAAGAGAGAACAGTGCACTTCATCTCTGGATCTAACTATTCAATCTCCTTTGTCTaGACAACTGGATCCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQDRNEERTVHFISGSNYSISFV*TTGSTV Trigger: GACGGTGGATCCAGTTGTCAAGACAAAGGAGATTGA...ATAGTTAGATCCAGAGATGAAGTGCACTGTTCTCTCTTCATTACGGTCCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCATTCAAACTTCTAATTTACATACATCTACCACCACTCGAGCGGGTCAGGGGTTCCACTTTGGGTTaGGGTTTTGAAATTATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPFKLLIYIHLPPLERVRGSTLG*GFEIIG Trigger: TCCTATAATTTCAAAACCCAAACCCAAAGTGGAACC...CCTGACCCGCTCGAGTGGTGGTAGATGTATGTAAATTAGAAGTTTGAATGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 90 bp | CAATGCTCAAAGGGAGGTCTGAAGCATTCGCACTCATCAATTTCTTaGGTTTCTCACACTCTTGAGACAGTCGTAATAAAGCACGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: QCSKGGLKHSHSSIS*VSHTLETVVIKHEF Trigger: AAATTCGTGCTTTATTACGACTGTCTCAAGAGTGTGAGAAACTCAAGAAATTGATGAGTGCGAATGCTTCAGACCTCCCTTTGAGCATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS GCA 90 bp | ATATGCAAGATTAGATTTTTCTGCTTCCACAAATGGATCGGAGAATaGACGCCCATGGAATCTTTTAAAGCCTTGAACTGTGTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ICKIRFFCFHKWIGE*TPMESFKALNCVLG Trigger: GCCAAGAACACAGTTCAAGGCTTTAAAAGATTCCATGGGCGTGCATTCTCCGATCCATTTGTGGAAGCAGAAAAATCTAATCTTGCATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | ATAAACAGAGGCTCTGTTACAGAGATCAGCGATTACAAAGACCCAGAACATAACTCATACTGGTCCTCCTaGTTTTTGAAAGAGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: INRGSVTEISDYKDPEHNSYWSS*FLKELI Trigger: GATCAGCTCTTTCAAAAACAAGGAGGACCAGTATGA...GTTATGTTCTGGGTCTTTGTAATCGCTGATCTCTGTAACAGAGCCTCTGTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCAGCTGTTTTAACATACAGATTGGCAGATTCAAGACACATTAACACAAAAGTTTTGGTTCCTCCTTaGGGGGTTCCACTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSAVLTYRLADSRHINTKVLVPP*GVPLWV Trigger: AACCCAAAGTGGAACCCCCAAAGGAGGAACCAAAAC...TTTTGTGTTAATGTGTCTTGAATCTGCCAATCTGTATGTTAAAACAGCTGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CCA 90 bp | CTGCACAATATCATATGCAAGATTAGATTTTTCTGCTTCCACAAATaGATCGGAGAATGCACGCCCATGGAATCTTTTAAAGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHNIICKIRFFCFHK*IGECTPMESFKALN Trigger: GTTCAAGGCTTTAAAAGATTCCATGGGCGTGCATTCTCCGATCCATTTGTGGAAGCAGAAAAATCTAATCTTGCATATGATATTGTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS TCA 90 bp | TCTGAAGCATTCGCACTCATCAATTTCTTGAGTTTCTCACACTCTTaGGACAGTCGTAATAAAGCACGAATTTTAGATTTTATGTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SEAFALINFLSFSHS*DSRNKARILDFMSS Trigger: GCTAGACATAAAATCTAAAATTCGTGCTTTATTACGACTGTCTCAAGAGTGTGAGAAACTCAAGAAATTGATGAGTGCGAATGCTTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS-3UTR CAA 90 bp | CTGTCAGCTGTTTTAACATACAGATTGGCAGATTCAAGACACATTAACACAAAATTTGTCTACATAAACTaGCTTTGGTTGATCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSAVLTYRLADSRHINTKFVYIN*LWLIFS Trigger: GGAGAAGATCAACCAAAGCAAGTTTATGTAGACAAA...TTTTGTGTTAATGTGTCTTGAATCTGCCAATCTGTATGTTAAAACAGCTGACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CCA 72 bp | AGGCCGAGCATCTCCCGGTCCAGCTGCCAGAGCAGCTaGCTCTCAATGGGCAGGTCCACAGTGCTGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RPSISRSSCQSS*LSMGRSTVLVF Trigger: GAAGACCAGCACTGTGGACCTGCCCATTGAGAGCCAGCTGCTCTGGCAGCTGGACCGGGAGATGCTCGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS GCA 72 bp | GACTCCGCCTTGTTTTCTGCTGGTGTCTGTGGCTGCTaGTGCTGCTCTTCAGTATGTGGTTCTTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSALFSAGVCGC*CCSSVCGSSWS Trigger: GGACCAGGAAGAACCACATACTGAAGAGCAGCAGCAGCAGCCACAGACACCAGCAGAAAACAAGGCGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS TCA 72 bp | GCCGTGCACGTTCACCCGGACCTTGACTTTCACTTTTaGGCTGGAGCCATCAGACTGTGGAGTGACTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVHVHPDLDFHF*AGAIRLWSDFL Trigger: CAGAAAGTCACTCCACAGTCTGATGGCTCCAGCTCAAAAGTGAAAGTCAAGGTCCGGGTGAACGTGCACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 72 bp | CTTGGCCATCCACTGGTCCATTCTGCTCAGCATGTTTaGGTTCCTCCTTTGGGGGTTCCACTTTGGGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGHPLVHSAQHV*VPPLGVPLWVW Trigger: CCAAACCCAAAGTGGAACCCCCAAAGGAGGAACCAAAACATGCTGAGCAGAATGGACCAGTGGATGGCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 90 bp | GGTTGTCTCCTTGGCCATCCACTGGTCCATTCTGCTCAGCATGTTTaGGTTCCTCCTTTGGGGGTTCCACTTTGGGTTTGGGTTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GCLLGHPLVHSAQHV*VPPLGVPLWVWVLK Trigger: TTTCAAAACCCAAACCCAAAGTGGAACCCCCAAAGGAGGAACCAAAACATGCTGAGCAGAATGGACCAGTGGATGGCCAAGGAGACAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS CAA 72 bp | TCCACCGTCAGGCTCTGTTTGTTCTGCAGGTTAAGCTaGCTATTCATCCACTCCATCGCCTCATTGGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: STVRLCLFCRLS*LFIHSIASLVL Trigger: AAGCACCAATGAGGCGATGGAGTGGATGAATAGCAAGCTTAACCTGCAGAACAAACAGAGCCTGACGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 90 bp | ACAACTGGATCCACCGTCAGGCTCTGTTTGTTCTGCAGGTTAAGCTaGCTATTCATCCACTCCATCGCCTCATTGGTGCTTTTCTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: TTGSTVRLCLFCRLS*LFIHSIASLVLFST Trigger: GGTAGAGAAAAGCACCAATGAGGCGATGGAGTGGATGAATAGCAAGCTTAACCTGCAGAACAAACAGAGCCTGACGGTGGATCCAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 72 bp | ACAATTGAGACCAGCAATCTGTGTGGCATCCATCACTaGCCGCCGTTCTGCATCAGTGTAGAAACTAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TIETSNLCGIHH*PPFCISVETRN Trigger: GTTCCTAGTTTCTACACTGATGCAGAACGGCGGTCAGTGATGGATGCCACACAGATTGCTGGTCTCAATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 72 bp | TCCACTCCATCGCCTCATTGGTGCTTTTCTCTACCTTaGTCACGTCAGCAGCATCCAAGTGTTCATACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: STPSPHWCFSLP*SRQQHPSVHTG Trigger: ACCAGTATGAACACTTGGATGCTGCTGACGTGACAAAGGTAGAGAAAAGCACCAATGAGGCGATGGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 90 bp | TGCTATTCATCCACTCCATCGCCTCATTGGTGCTTTTCTCTACCTTaGTCACGTCAGCAGCATCCAAGTGTTCATACTGGTCCTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CYSSTPSPHWCFSLP*SRQQHPSVHTGPPC Trigger: ACAAGGAGGACCAGTATGAACACTTGGATGCTGCTGACGTGACAAAGGTAGAGAAAAGCACCAATGAGGCGATGGAGTGGATGAATAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS CAA 90 bp | TCAATCTCCTTTGTCTTGACAACTGGATCCACCGTCAGGCTCTGTTaGTTCTGCAGGTTAAGCTTGCTATTCATCCACTCCATCGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SISFVLTTGSTVRLC*FCRLSLLFIHSIAS Trigger: TGAGGCGATGGAGTGGATGAATAGCAAGCTTAACCTGCAGAACAAACAGAGCCTGACGGTGGATCCAGTTGTCAAGACAAAGGAGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 90 bp | CTTTTGCCTTCTTTGCTTGAGGTGGTTGGTCCGTCTTTTTATCTTTaGATCCAGCTTGAGATGTCTCCATCTCCTCAGACTCCGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLPSLLEVVGPSFYL*IQLEMSPSPQTPPC Trigger: ACAAGGCGGAGTCTGAGGAGATGGAGACATCTCAAGCTGGATCAAAAGATAAAAAGACGGACCAACCACCTCAAGCAAAGAAGGCAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 90 bp | TTGTTCTGCAGGTTAAGCTTGCTATTCATCCACTCCATCGCCTCATaGGTGCTTTTCTCTACCTTTGTCACGTCAGCAGCATCCAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LFCRLSLLFIHSIAS*VLFSTFVTSAASKC Trigger: ACACTTGGATGCTGCTGACGTGACAAAGGTAGAGAAAAGCACCAATGAGGCGATGGAGTGGATGAATAGCAAGCTTAACCTGCAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 72 bp | GGTGGTTGGTCCGTCTTTTTATCTTTTGATCCAGCTTaGGATGTCTCCATCTCCTCAGACTCCGCCTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GGWSVFLSFDPA*DVSISSDSALF Trigger: AAACAAGGCGGAGTCTGAGGAGATGGAGACATCTCAAGCTGGATCAAAAGATAAAAAGACGGACCAACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 72 bp | AGGTTAAGCTTGCTATTCATCCACTCCATCGCCTCATaGGTGCTTTTCTCTACCTTTGTCACGTCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSLLFIHSIAS*VLFSTFVTSAA Trigger: TGCTGCTGACGTGACAAAGGTAGAGAAAAGCACCAATGAGGCGATGGAGTGGATGAATAGCAAGCTTAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 72 bp | TTTGTCTTGACAACTGGATCCACCGTCAGGCTCTGTTaGTTCTGCAGGTTAAGCTTGCTATTCATCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FVLTTGSTVRLC*FCRLSLLFIHS Trigger: GGAGTGGATGAATAGCAAGCTTAACCTGCAGAACAAACAGAGCCTGACGGTGGATCCAGTTGTCAAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 90 bp | TTAACTTGGATTGCTCCAAGACGCTTCGAAGTGGCGGCTCCACTCTaGCTAGGAGATCATCACACATCTCCAAAAATTTGCCTCTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: LTWIAPRRFEVAAPL*LGDHHTSPKICLYS Trigger: TGAATAGAGGCAAATTTTTGGAGATGTGTGATGATCTCCTAGCAAGAGTGGAGCCGCCACTTCGAAGCGTCTTGGAGCAATCCAAGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 72 bp | CTTTGCTTGAGGTGGTTGGTCCGTCTTTTTATCTTTTaGTCCAGCTTGAGATGTCTCCATCTCCTCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: LCLRWLVRLFIF*SSLRCLHLLRL Trigger: GAGTCTGAGGAGATGGAGACATCTCAAGCTGGATCAAAAGATAAAAAGACGGACCAACCACCTCAAGCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 72 bp | TCGGAGAATGCACGCCCATGGAATCTTTTAAAGCCTTaGACTGTGTTCTTGGCATTAGAAATTACCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SENARPWNLLKP*TVFLALEITWL Trigger: GAGCCAGGTAATTTCTAATGCCAAGAACACAGTTCAAGGCTTTAAAAGATTCCATGGGCGTGCATTCTCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CCA 72 bp | CTATCTCCACTGCATAAATATCTTCTTTCTTTAACTTaGATTGCTCCAAGACGCTTCGAAGTGGCGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSPLHKYLLSLT*IAPRRFEVAAP Trigger: TGGAGCCGCCACTTCGAAGCGTCTTGGAGCAATCCAAGTTAAAGAAAGAAGATATTTATGCAGTGGAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS CAA 72 bp | TCTTTGCTTGAGGTGGTTGGTCCGTCTTTTTATCTTTaGATCCAGCTTGAGATGTCTCCATCTCCTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SLLEVVGPSFYL*IQLEMSPSPQT Trigger: AGTCTGAGGAGATGGAGACATCTCAAGCTGGATCAAAAGATAAAAAGACGGACCAACCACCTCAAGCAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
||
| CDS TCA 72 bp | ATTAGAAATTACCTGGCTCTTAGCTGCTGCTCCAATTaGACGATTCTTAGGACCAAAAGAAACACATGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: IRNYLALSCCSN*TILRTKRNTCR Trigger: CCGGCATGTGTTTCTTTTGGTCCTAAGAATCGTTCAATTGGAGCAGCAGCTAAGAGCCAGGTAATTTCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS TCA 72 bp | TTCCTCCTTTGGGGGTTCCACTTTGGGTTTGGGTTTTaGAATTATAGGACTGCAAATACTTGTCAGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FLLWGFHFGFGF*NYRTANTCQLL Trigger: AAGGAGCTGACAAGTATTTGCAGTCCTATAATTTCAAAACCCAAACCCAAAGTGGAACCCCCAAAGGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS CCA 72 bp | CTTAATTTTAGCTTCAATCTCCTTTGTCTTGACAACTaGATCCACCGTCAGGCTCTGTTTGTTCTGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LNFSFNLLCLDN*IHRQALFVLQV Trigger: AACCTGCAGAACAAACAGAGCCTGACGGTGGATCCAGTTGTCAAGACAAAGGAGATTGAAGCTAAAATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS CAA 90 bp | CAAATACTTGTCAGCTCCTTAATTTTAGCTTCAATCTCCTTTGTCTaGACAACTGGATCCACCGTCAGGCTCTGTTTGTTCTGCAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: QILVSSLILASISFV*TTGSTVRLCLFCRL Trigger: TAACCTGCAGAACAAACAGAGCCTGACGGTGGATCCAGTTGTCAAGACAAAGGAGATTGAAGCTAAAATTAAGGAGCTGACAAGTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS TCA 72 bp | AAGGGAGGTCTGAAGCATTCGCACTCATCAATTTCTTaGGTTTCTCACACTCTTGAGACAGTCGTAATAAAG | + |
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Preference number: 6 (lower is better) Translates to: KGGLKHSHSSIS*VSHTLETVVIK Trigger: CTTTATTACGACTGTCTCAAGAGTGTGAGAAACTCAAGAAATTGATGAGTGCGAATGCTTCAGACCTCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS GCA 72 bp | ATTAGATTTTTCTGCTTCCACAAATGGATCGGAGAATaGACGCCCATGGAATCTTTTAAAGCCTTGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: IRFFCFHKWIGE*TPMESFKALNC Trigger: ACAGTTCAAGGCTTTAAAAGATTCCATGGGCGTGCATTCTCCGATCCATTTGTGGAAGCAGAAAAATCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS TCA 72 bp | CTTTCTTCAGATTCCTGGAACCGTGTCTTAATGGGTTaGCCTAAACTTTTTAATTCAGCCAATTTGTCTACA | + |
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Preference number: 6 (lower is better) Translates to: LSSDSWNRVLMG*PKLFNSANLST Trigger: TGTAGACAAATTGGCTGAATTAAAAAGTTTAGGTCAACCCATTAAGACACGGTTCCAGGAATCTGAAGAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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| CDS GCA 72 bp | TATGTAACCTTTATGCCCGTTAATCCAGTGGGCAACTaGACAATATCATATGCAAGATTAGATTTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YVTFMPVNPVGN*TISYARLDFSA Trigger: AGCAGAAAAATCTAATCTTGCATATGATATTGTGCAGTTGCCCACTGGATTAACGGGCATAAAGGTTACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020630.8 |
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