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Pregenerated sensors for HSPA1L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000007033

Ensembl transcript IDs: ENSMUST00000007248.5

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GTTCGAGGCTTCTCCATCGGGATCCCAAAGGATGGTGACGTAGGCTaGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAAGATGAA +
Preference number: 2 (lower is better)
Translates to: VRGFSIGIPKDGDVG*SPVSSRIILMFEDE
Trigger: TTCATCTTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATCCTTTGGGATCCCGATGGAGAAGCCTCGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
3UTR-3UTR TCA 90 bp GAGAAAGGTGGGGTGTGGATAATAAATAACAGACATCCAAATTCTTCAAATGGCGTTCAGGATCATAGATaGGAGGGTGGGGGTGTGAAA +
Preference number: 2 (lower is better)
Translates to: EKGGVWIINNRHPNSSNGVQDHR*EGGGVK
Trigger: TTTCACACCCCCACCCTCTCATCTATGATCCTGAAC...GCCATTTGAAGAATTTGGATGTCTGTTATTTATTATCCACACCCCACCTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR GCA 90 bp GGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGGATCATAGATGAGCCAGGTTTGCCTGGGTaGTGGACGACAGCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSKRGLVFLKVQFRIIDEPGLPG*WTTASS
Trigger: AGAGGACGCTGTCGTCCAGCACCCAGGCAAACCTGG...CTCATCTATGATCCTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR TCA 90 bp GGCCTGGTTTTCCTAAAGGTCCAGTTCAGGATCATAGATGAGAGGGTGGGGGTGGTTTGCCGGCTTCATTaGTCACTTGAAATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GLVFLKVQFRIIDERVGVVCRLH*SLEMAK
Trigger: TTTGGCCATTTCAAGTGATCAATGAAGCCGGCAAAC...CACCCCCACCCTCTCATCTATGATCCTGAACTGGACCTTTAGGAAAACCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CCA 90 bp AAATTCTTCAAATGGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGGGATTCATGGCCACCTaGTTCTTGGCAGCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: KFFKWLKEGPGFPKGPVQGFMAT*FLAASP
Trigger: CGGAGACGCTGCCAAGAACCAGGTGGCCATGAATCC...CTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCCATTTGAAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR TCA 90 bp GGCCTGGTTTTCCTAAAGGTCCAGTTCAGGATCATAGATGAGAGGGTGGGGGTGCCAAAGCTTCATATCTaGCTGCACAACAGGATCATT +
Preference number: 4 (lower is better)
Translates to: GLVFLKVQFRIIDERVGVPKLHI*LHNRII
Trigger: AATGATCCTGTTGTGCAGTCAGATATGAAGCTTTGG...CACCCCCACCCTCTCATCTATGATCCTGAACTGGACCTTTAGGAAAACCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR GCA 90 bp GATGGTGACGTAGGCTTGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAATCCTGCGATGACACCTaGATCCTTGGTGGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: DGDVGLSPVSSRIILMFESCDDT*ILGGLP
Trigger: CGGCAAGCCACCAAGGATGCAGGTGTCATCGCAGGA...TTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR TCA 90 bp AAATTCTTCAAATGGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGCGTCAGTACCATGGATaGGATCTCCTCTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KFFKWLKEGPGFPKGPVQRQYHG*DLLWVE
Trigger: TTCTACCCAGAGGAGATCTCATCCATGGTACTGACG...CTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCCATTTGAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CCA 90 bp AAATTCTTCAAATGGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGCCGGTGCATCCGCTCTaGTACAGTTTTGTGATGATC +
Preference number: 4 (lower is better)
Translates to: KFFKWLKEGPGFPKGPVQPVHPL*YSFVMI
Trigger: GATCATCACAAAACTGTACCAGAGCGGATGCACCGG...CTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCCATTTGAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR GCA 90 bp GAGAAAGGTGGGGTGTGGATAATAAATAACAGACATCCAAATTCTTCAAATGGCCAGCACATTGAGTCCTaGGATGACACCTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: EKGGVWIINNRHPNSSNGQHIES*DDTCIL
Trigger: AAGGATGCAGGTGTCATCGCAGGACTCAATGTGCTG...GCCATTTGAAGAATTTGGATGTCTGTTATTTATTATCCACACCCCACCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CCA 90 bp GATGGTGACGTAGGCTTGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAATCAAAAACAGTGTTCTaGGGATTCATGGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: DGDVGLSPVSSRIILMFESKTVF*GFMATW
Trigger: CCAGGTGGCCATGAATCCCCAGAACACTGTTTTTGA...TTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CCA 90 bp GGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGGATCATAGATGAGACTAGAACAATGTCATaGATTTTAGCCTTATCCATC +
Preference number: 4 (lower is better)
Translates to: GSKRGLVFLKVQFRIIDETRTMS*ILALSI
Trigger: GATGGATAAGGCTAAAATCCATGACATTGTTCTAGT...CTCATCTATGATCCTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CCA 90 bp GATGGTGACGTAGGCTTGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAAATTCTAAGGCATTTTTaGCAGCGATTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DGDVGLSPVSSRIILMFEILRHF*QRFSPS
Trigger: AGAGGGAGAAAATCGCTGCCAAAAATGCCTTAGAAT...TTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR GCA 90 bp GATGGTGACGTAGGCTTGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAAAGGAAAGGACCTCATTaGATTTATCCAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: DGDVGLSPVSSRIILMFERKGPH*IYPVFS
Trigger: AGAAAATACTGGATAAATGCAATGAGGTCCTTTCCT...TTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS CCA 90 bp TTCCTCGATGGTAGGGCCTGTGGCAGCCCTGCCGGGAGTATACCCTaGCGTACAGGTGGGCCCGGTGCATCCGCTCTGGTACAGTTTTGT +
Preference number: 5 (lower is better)
Translates to: FLDGRACGSPAGSIP*RTGGPGASALVQFC
Trigger: ACAAAACTGTACCAGAGCGGATGCACCGGGCCCACCTGTACGCCAGGGTATACTCCCGGCAGGGCTGCCACAGGCCCTACCATCGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CAA 90 bp AAATTCTTCAAATGGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGCGCTCAATCTCCTCCTaGCTCAGGCGACCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: KFFKWLKEGPGFPKGPVQRSISS*LRRPLS
Trigger: CGACAAGGGTCGCCTGAGCAAGGAGGAGATTGAGCG...CTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCCATTTGAAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CAA 90 bp GGCCTGGTTTTCCTAAAGGTCCAGTTCAGGATCATAGATGAGAGGGTGGGGGTGTTAGCCTTATCCATCTaGGCATCCCGAAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: GLVFLKVQFRIIDERVGVLALSI*ASRRDF
Trigger: AAAGTCTCTTCGGGATGCCAAGATGGATAAGGCTAA...CACCCCCACCCTCTCATCTATGATCCTGAACTGGACCTTTAGGAAAACCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CAA 90 bp GGCCTGGTTTTCCTAAAGGTCCAGTTCAGGATCATAGATGAGAGGGTGGGGGTGGGCTTCATTGATCACTaGAAATGGCCAAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: GLVFLKVQFRIIDERVGVGFIDH*KWPKLH
Trigger: ATGAAGCTTTGGCCATTTCAAGTGATCAATGAAGCC...CACCCCCACCCTCTCATCTATGATCCTGAACTGGACCTTTAGGAAAACCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CAA 90 bp AAATTCTTCAAATGGCTCAAAGAGGGGCCTGGTTTTCCTAAAGGTCCAGTTCAGACTGCCTCATCGGGATaGATACTCTTGTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: KFFKWLKEGPGFPKGPVQTASSG*ILLLRS
Trigger: GGATCTCAACAAGAGTATCAATCCCGATGAGGCAGT...CTGAACTGGACCTTTAGGAAAACCAGGCCCCTCTTTGAGCCATTTGAAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CAA 90 bp GATGGTGACGTAGGCTTGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAAGATTCTAAGGCATTTTaGGCAGCGATTTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: DGDVGLSPVSSRIILMFEDSKAF*AAIFSL
Trigger: GAGGGAGAAAATCGCTGCCAAAAATGCCTTAGAATC...TTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS-3UTR CAA 90 bp GATGGTGACGTAGGCTTGAGTCCAGTCAGTTCAAGAATCATATTGATGTTTGAACAGGAAAGGACCTCATaGCATTTATCCAGTATTTTC +
Preference number: 5 (lower is better)
Translates to: DGDVGLSPVSSRIILMFEQERTS*HLSSIF
Trigger: GAAAATACTGGATAAATGCAATGAGGTCCTTTCCTG...TTCAAACATCAATATGATTCTTGAACTGACTGGACTCAAGCCTACGTCACCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS CCA 72 bp GGTAGGGCCTGTGGCAGCCCTGCCGGGAGTATACCCTaGCGTACAGGTGGGCCCGGTGCATCCGCTCTGGTA +
Preference number: 6 (lower is better)
Translates to: GRACGSPAGSIP*RTGGPGASALV
Trigger: TACCAGAGCGGATGCACCGGGCCCACCTGTACGCCAGGGTATACTCCCGGCAGGGCTGCCACAGGCCCTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS CCA 72 bp TACCCTGGCGTACAGGTGGGCCCGGTGCATCCGCTCTaGTACAGTTTTGTGATGATCGGATTACACATATTT +
Preference number: 6 (lower is better)
Translates to: YPGVQVGPVHPL*YSFVMIGLHIF
Trigger: AAATATGTGTAATCCGATCATCACAAAACTGTACCAGAGCGGATGCACCGGGCCCACCTGTACGCCAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS CAA 72 bp CTCTTCATATTAAAGGCGTACGATTCTAAGGCATTTTaGGCAGCGATTTTCTCCCTCTGGCCCTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: LFILKAYDSKAF*AAIFSLWPSSS
Trigger: GGAGGATGAGGGCCAGAGGGAGAAAATCGCTGCCAAAAATGCCTTAGAATCGTACGCCTTTAATATGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS TCA 72 bp ACCATCACCTTGGGTTTGCCGGCTTCATTGATCACTTaGAATGGCCAAAGCTTCATATCTGACTGCACAACA +
Preference number: 6 (lower is better)
Translates to: TITLGLPASLIT*NGQSFISDCTT
Trigger: TGTTGTGCAGTCAGATATGAAGCTTTGGCCATTTCAAGTGATCAATGAAGCCGGCAAACCCAAGGTGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS TCA 72 bp TGCATTTATCCAGTATTTTCTTTTTATCGGACTCGCTaGTCTTGTCCTTCAGACCCTCATCACCCACAGCGC +
Preference number: 6 (lower is better)
Translates to: CIYPVFSFYRTR*SCPSDPHHPQR
Trigger: GCGCTGTGGGTGATGAGGGTCTGAAGGACAAGATCAGCGAGTCCGATAAAAAGAAAATACTGGATAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5
CDS TCA 72 bp TATAGGACACCATCACCTTGGGTTTGCCGGCTTCATTaGTCACTTGAAATGGCCAAAGCTTCATATCTGACT +
Preference number: 6 (lower is better)
Translates to: YRTPSPWVCRLH*SLEMAKASYLT
Trigger: AGTCAGATATGAAGCTTTGGCCATTTCAAGTGATCAATGAAGCCGGCAAACCCAAGGTGATGGTGTCCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000007248.5