Pregenerated sensors for HSPA14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109865Ensembl transcript IDs: ENSMUST00000027961.12
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAAGACACCCTCCCGGGGGCCTGCAGTGTGTGCTGTCTTCGGGCTaGCAGCGGGGTCCCAGAGGGAAACAGTACTGTGAATCTGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: GRHPPGGLQCVLSSG*QRGPRGKQYCESVG Trigger: GCCGACAGATTCACAGTACTGTTTCCCTCTGGGACCCCGCTGCCAGCCCGAAGACAGCACACACTGCAGGCCCCCGGGAGGGTGTCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | AGTTCAAGGCAAACGGAAGACACCCTCCCGGGGGCCTGCAGTGTGTaGTGTCTTCGGGCTGGCAGCGGGGTCCCAGAGGGAAACAGTACT | + |
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Preference number: 5 (lower is better) Translates to: SSRQTEDTLPGACSV*CLRAGSGVPEGNST Trigger: AGTACTGTTTCCCTCTGGGACCCCGCTGCCAGCCCGAAGACAGCACACACTGCAGGCCCCCGGGAGGGTGTCTTCCGTTTGCCTTGAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | CTTCCCGGTAGGGTGGTCTTGTCCAATCCCATAAGCAAGGAGAGCTaGAGACGGCTCATGGATCAGCCGCAGCACGTTAAATCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LPGRVVLSNPISKES*RRLMDQPQHVKSSS Trigger: GCTGCTGGATTTAACGTGCTGCGGCTGATCCATGAGCCGTCTGCAGCTCTCCTTGCTTATGGGATTGGACAAGACCACCCTACCGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | CGAGTAAGCAACAATGGCTGGTGTGACTCTATCCCCTGCATCATTTaGAACCACATCGGCCCGGCCATCCTTGTAGACAGCCACACAGGC | + |
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Preference number: 5 (lower is better) Translates to: RVSNNGWCDSIPCII*NHIGPAILVDSHTG Trigger: GCCTGTGTGGCTGTCTACAAGGATGGCCGGGCCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | GTCCAACCACCTGTTCACGTTCCGAGTAAGCAACAATGGCTGGTGTaGCTCTATCCCCTGCATCATTTGCAACCACATCGGCCCGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VQPPVHVPSKQQWLV*LYPLHHLQPHRPGH Trigger: ATGGCCGGGCCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCGGAACGTGAACAGGTGGTTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | TGCCAGTCCAACCACCTGTTCACGTTCCGAGTAAGCAACAATGGCTaGTGTGACTCTATCCCCTGCATCATTTGCAACCACATCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: CQSNHLFTFRVSNNG*CDSIPCIICNHIGP Trigger: CGGGCCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCGGAACGTGAACAGGTGGTTGGACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | TTCACGTTCCGAGTAAGCAACAATGGCTGGTGTGACTCTATCCCCTaGATCATTTGCAACCACATCGGCCCGGCCATCCTTGTAGACAGC | + |
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Preference number: 5 (lower is better) Translates to: FTFRVSNNGWCDSIP*IICNHIGPAILVDS Trigger: GCTGTCTACAAGGATGGCCGGGCCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCGGAACGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | CCCCCAGAGCAGACTTCTGCTTTTCTCCAAAGTCAAATGGGACAGTaGCAACCACGTCATTTGCATCTGAGCCCAGGACAGAATGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPEQTSAFLQSQMGQ*QPRHLHLSPGQNAL Trigger: CAGCGCATTCTGTCCTGGGCTCAGATGCAAATGACGTGGTTGTCACTGTCCCATTTGACTTTGGAGAAAAGCAGAAGTCTGCTCTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | GAGTTGAGGAGGTCCACGGCTGGGAAGAGATCTTTAATCAGCTGCTaGAGCTTTGGGATTCTGGAAGATCCACCACACAGCACAACCTTG | + |
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Preference number: 5 (lower is better) Translates to: ELRRSTAGKRSLISC*SFGILEDPPHSTTL Trigger: CAAGGTTGTGCTGTGTGGTGGATCTTCCAGAATCCCAAAGCTGCAGCAGCTGATTAAAGATCTCTTCCCAGCCGTGGACCTCCTCAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | AAGAATCCCGGCTTCTATGGCTGCACCAATAGGGATGACCTCATCTaGAGGGATAGAGTTGAGGAGGTCCACGGCTGGGAAGAGATCTTT | + |
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Preference number: 5 (lower is better) Translates to: KNPGFYGCTNRDDLI*RDRVEEVHGWEEIF Trigger: AAAGATCTCTTCCCAGCCGTGGACCTCCTCAACTCTATCCCTCCAGATGAGGTCATCCCTATTGGTGCAGCCATAGAAGCCGGGATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | ACAACCTCTGGAACTCCGAAGCCAGGTACTGTGCTAAGGTGTCTGTaGAATGTGCGCCCCCTATGTTGTCACTGGTGTTTGTGGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: TTSGTPKPGTVLRCL*NVRPLCCHWCLWKG Trigger: TCCTTTCCACAAACACCAGTGACAACATAGGGGGCGCACATTTCACAGACACCTTAGCACAGTACCTGGCTTCGGAGTTCCAGAGGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | ACGTTAAATCCAGCAGCTCCAGCCGCCTCCCCCAGAGCAGACTTCTaGTTTTCTCCAAAGTCAAATGGGACAGTGACAACCACGTCATTT | + |
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Preference number: 5 (lower is better) Translates to: TLNPAAPAASPRADF*FSPKSNGTVTTTSF Trigger: AAATGACGTGGTTGTCACTGTCCCATTTGACTTTGGAGAAAAGCAGAAGTCTGCTCTGGGGGAGGCGGCTGGAGCTGCTGGATTTAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | ATAGAGTTGAGGAGGTCCACGGCTGGGAAGAGATCTTTAATCAGCTaGTGCAGCTTTGGGATTCTGGAAGATCCACCACACAGCACAACC | + |
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Preference number: 5 (lower is better) Translates to: IELRRSTAGKRSLIS*CSFGILEDPPHSTT Trigger: GGTTGTGCTGTGTGGTGGATCTTCCAGAATCCCAAAGCTGCAGCAGCTGATTAAAGATCTCTTCCCAGCCGTGGACCTCCTCAACTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | GATTCTGGAAGATCCACCACACAGCACAACCTTGTTGATATCATCTaGTGTGAATCCAGTCTGGCGCAAGAGCTCCCGGATTGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: DSGRSTTQHNLVDII*CESSLAQELPDCFC Trigger: ACAGAAGCAATCCGGGAGCTCTTGCGCCAGACTGGATTCACAGCAGATGATATCAACAAGGTTGTGCTGTGTGGTGGATCTTCCAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | GAGGTCCACGGCTGGGAAGAGATCTTTAATCAGCTGCTGCAGCTTTaGGATTCTGGAAGATCCACCACACAGCACAACCTTGTTGATATC | + |
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Preference number: 5 (lower is better) Translates to: EVHGWEEIFNQLLQL*DSGRSTTQHNLVDI Trigger: GATATCAACAAGGTTGTGCTGTGTGGTGGATCTTCCAGAATCCCAAAGCTGCAGCAGCTGATTAAAGATCTCTTCCCAGCCGTGGACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | CAGGATGCAACCTCAACAGTAATGGCCTCACACTTGCCGGTGTCTTaGTCTGTGCACGTCACCTGTAAAGATCCATCCCTTTTCATAGTA | + |
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Preference number: 5 (lower is better) Translates to: QDATSTVMASHLPVS*SVHVTCKDPSLFIV Trigger: TACTATGAAAAGGGATGGATCTTTACAGGTGACGTGCACAGACCAAGACACCGGCAAGTGTGAGGCCATTACTGTTGAGGTTGCATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | AAGGAATCTACAAAGCAGTTGGCACTTCCCAAGGTTGACAGAGAATaGTTGGCCACTTCAGCGCTGTTCATCAATTTCATCATGGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: KESTKQLALPKVDRE*LATSALFINFIMAR Trigger: CCGAGCCATGATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | AATCTACAAAGCAGTTGGCACTTCCCAAGGTTGACAGAGAATGCTTaGCCACTTCAGCGCTGTTCATCAATTTCATCATGGCTCGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: NLQSSWHFPRLTENA*PLQRCSSISSWLGH Trigger: ATGCCCGAGCCATGATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | TGCAATCAAAGTCTTGACCTTCATACAAGGAATCTACAAAGCAGTTaGCACTTCCCAAGGTTGACAGAGAATGCTTGGCCACTTCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: CNQSLDLHTRNLQSS*HFPRLTENAWPLQR Trigger: GCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTCCTTGTATGAAGGTCAAGACTTTGATTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 90 bp | CCACACAGCACAACCTTGTTGATATCATCTGCTGTGAATCCAGTCTaGCGCAAGAGCTCCCGGATTGCTTCTGTACATTTGTTAAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: PHSTTLLISSAVNPV*RKSSRIASVHLLKS Trigger: GCTTTTTAACAAATGTACAGAAGCAATCCGGGAGCTCTTGCGCCAGACTGGATTCACAGCAGATGATATCAACAAGGTTGTGCTGTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | ACCTTCATACAAGGAATCTACAAAGCAGTTGGCACTTCCCAAGGTTaGCAGAGAATGCTTGGCCACTTCAGCGCTGTTCATCAATTTCAT | + |
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Preference number: 5 (lower is better) Translates to: TFIQGIYKAVGTSQG*QRMLGHFSAVHQFH Trigger: ATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTCCTTGTATGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | CAGAGCAGCTCAAATCTTGCTCTGGACACATTGCAATCAAAGTCTTaGCCTTCATACAAGGAATCTACAAAGCAGTTGGCACTTCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QSSSNLALDTLQSKS*PSYKESTKQLALPK Trigger: CTTGGGAAGTGCCAACTGCTTTGTAGATTCCTTGTATGAAGGTCAAGACTTTGATTGCAATGTGTCCAGAGCAAGATTTGAGCTGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | TTCTCCAAAGTCAAATGGGACAGTGACAACCACGTCATTTGCATCTaGGCCCAGGACAGAATGCGCTGTTTCTTTCATTTTACTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: FSKVKWDSDNHVICI*AQDRMRCFFHFTEY Trigger: ATATTCAGTAAAATGAAAGAAACAGCGCATTCTGTCCTGGGCTCAGATGCAAATGACGTGGTTGTCACTGTCCCATTTGACTTTGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | TACTTTCTGAGATGTATTTCTGAGCTTGTGGATCTGCAGAGCTTCTaGCAAGGATCTGTTTCACTTTCACTACTGTGCTTGAAACATGTC | + |
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Preference number: 5 (lower is better) Translates to: YFLRCISELVDLQSF*QGSVSLSLLCLKHV Trigger: GACATGTTTCAAGCACAGTAGTGAAAGTGAAACAGATCCTTGGCAGAAGCTCTGCAGATCCACAAGCTCAGAAATACATCTCAGAAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 90 bp | CCATTTTTCTCAATGACTAAGCATTTACTTTCTGAGATGTATTTCTaGGCTTGTGGATCTGCAGAGCTTCTGCCAAGGATCTGTTTCACT | + |
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Preference number: 5 (lower is better) Translates to: PFFSMTKHLLSEMYF*ACGSAELLPRICFT Trigger: AGTGAAACAGATCCTTGGCAGAAGCTCTGCAGATCCACAAGCTCAGAAATACATCTCAGAAAGTAAATGCTTAGTCATTGAGAAAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 90 bp | TTCTGTACATTTGTTAAAAAGCGGAGAACAGAGCAGCTCAAATCTTaGTCTGGACACATTGCAATCAAAGTCTTGACCTTCATACAAGGA | + |
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Preference number: 5 (lower is better) Translates to: FCTFVKKRRTEQLKS*SGHIAIKVLTFIQG Trigger: TCCTTGTATGAAGGTCAAGACTTTGATTGCAATGTGTCCAGAGCAAGATTTGAGCTGCTCTGTTCTCCGCTTTTTAACAAATGTACAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AGTTCAAGGCAAACGGAAGACACCCTCCCGGGGGCCTaGAGTGTGTGCTGTCTTCGGGCTGGCAGCGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSRQTEDTLPGA*SVCCLRAGSGV Trigger: GACCCCGCTGCCAGCCCGAAGACAGCACACACTGCAGGCCCCCGGGAGGGTGTCTTCCGTTTGCCTTGAACT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | GGCTTCTATGGCTGCACCAATAGGGATGACCTCATCTaGAGGGATAGAGTTGAGGAGGTCCACGGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GFYGCTNRDDLI*RDRVEEVHGWE Trigger: TTCCCAGCCGTGGACCTCCTCAACTCTATCCCTCCAGATGAGGTCATCCCTATTGGTGCAGCCATAGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AACAATGGCTGGTGTGACTCTATCCCCTGCATCATTTaGAACCACATCGGCCCGGCCATCCTTGTAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: NNGWCDSIPCII*NHIGPAILVDS Trigger: GCTGTCTACAAGGATGGCCGGGCCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | CGAGTAAGCAACAATGGCTGGTGTGACTCTATCCCCTaGATCATTTGCAACCACATCGGCCCGGCCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: RVSNNGWCDSIP*IICNHIGPAIL Trigger: AAGGATGGCCGGGCCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AGGGTGGTCTTGTCCAATCCCATAAGCAAGGAGAGCTaGAGACGGCTCATGGATCAGCCGCAGCACGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: RVVLSNPISKES*RRLMDQPQHVK Trigger: TTTAACGTGCTGCGGCTGATCCATGAGCCGTCTGCAGCTCTCCTTGCTTATGGGATTGGACAAGACCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | GGAACTCCGAAGCCAGGTACTGTGCTAAGGTGTCTGTaGAATGTGCGCCCCCTATGTTGTCACTGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GTPKPGTVLRCL*NVRPLCCHWCL Trigger: CAAACACCAGTGACAACATAGGGGGCGCACATTTCACAGACACCTTAGCACAGTACCTGGCTTCGGAGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AGGTCCACGGCTGGGAAGAGATCTTTAATCAGCTGCTaGAGCTTTGGGATTCTGGAAGATCCACCACACAGC | + |
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Preference number: 6 (lower is better) Translates to: RSTAGKRSLISC*SFGILEDPPHS Trigger: GCTGTGTGGTGGATCTTCCAGAATCCCAAAGCTGCAGCAGCTGATTAAAGATCTCTTCCCAGCCGTGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AGGAGGTCCACGGCTGGGAAGAGATCTTTAATCAGCTaGTGCAGCTTTGGGATTCTGGAAGATCCACCACAC | + |
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Preference number: 6 (lower is better) Translates to: RRSTAGKRSLIS*CSFGILEDPPH Trigger: GTGTGGTGGATCTTCCAGAATCCCAAAGCTGCAGCAGCTGATTAAAGATCTCTTCCCAGCCGTGGACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | TCTATGGCTGCACCAATAGGGATGACCTCATCTGGAGGGATAGAGTaGAGGAGGTCCACGGCTGGGAAGAGATCTTTAATCAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SMAAPIGMTSSGGIE*RRSTAGKRSLISCC Trigger: GCAGCAGCTGATTAAAGATCTCTTCCCAGCCGTGGACCTCCTCAACTCTATCCCTCCAGATGAGGTCATCCCTATTGGTGCAGCCATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | GCCAGGTACTGTGCTAAGGTGTCTGTGAAATGTGCGCCCCCTATGTaGTCACTGGTGTTTGTGGAAAGGACCCGATACATCCCACTGTTA | + |
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Preference number: 6 (lower is better) Translates to: ARYCAKVSVKCAPPM*SLVFVERTRYIPLL Trigger: TAACAGTGGGATGTATCGGGTCCTTTCCACAAACACCAGTGACAACATAGGGGGCGCACATTTCACAGACACCTTAGCACAGTACCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | CCTGTTCACGTTCCGAGTAAGCAACAATGGCTGGTGTaGCTCTATCCCCTGCATCATTTGCAACCACATCGG | + |
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Preference number: 6 (lower is better) Translates to: PVHVPSKQQWLV*LYPLHHLQPHR Trigger: CCGATGTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCGGAACGTGAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AGATCCACCACACAGCACAACCTTGTTGATATCATCTaGTGTGAATCCAGTCTGGCGCAAGAGCTCCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: RSTTQHNLVDII*CESSLAQELPD Trigger: ATCCGGGAGCTCTTGCGCCAGACTGGATTCACAGCAGATGATATCAACAAGGTTGTGCTGTGTGGTGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | ACCTCAACAGTAATGGCCTCACACTTGCCGGTGTCTTaGTCTGTGCACGTCACCTGTAAAGATCCATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TSTVMASHLPVS*SVHVTCKDPSL Trigger: AAGGGATGGATCTTTACAGGTGACGTGCACAGACCAAGACACCGGCAAGTGTGAGGCCATTACTGTTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | AAACACCAAAACATTGCTCTTCCCGGTAGGGTGGTCTaGTCCAATCCCATAAGCAAGGAGAGCTGCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: KHQNIALPGRVV*SNPISKESCRR Trigger: CCGTCTGCAGCTCTCCTTGCTTATGGGATTGGACAAGACCACCCTACCGGGAAGAGCAATGTTTTGGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | GCACCAATAGGGATGACCTCATCTGGAGGGATAGAGTaGAGGAGGTCCACGGCTGGGAAGAGATCTTTAATC | + |
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Preference number: 6 (lower is better) Translates to: APIGMTSSGGIE*RRSTAGKRSLI Trigger: GATTAAAGATCTCTTCCCAGCCGTGGACCTCCTCAACTCTATCCCTCCAGATGAGGTCATCCCTATTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | TCATCATGGCTCGGGCATTTCCTCTCACATCATGTTTaGACAACCTCTGGAACTCCGAAGCCAGGTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSWLGHFLSHHV*TTSGTPKPGTV Trigger: CACAGTACCTGGCTTCGGAGTTCCAGAGGTTGTTCAAACATGATGTGAGAGGAAATGCCCGAGCCATGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | AACCACCTGTTCACGTTCCGAGTAAGCAACAATGGCTaGTGTGACTCTATCCCCTGCATCATTTGCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: NHLFTFRVSNNG*CDSIPCIICNH Trigger: GTGGTTGCAAATGATGCAGGGGATAGAGTCACACCAGCCATTGTTGCTTACTCGGAACGTGAACAGGTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | GGCTGGGAAGAGATCTTTAATCAGCTGCTGCAGCTTTaGGATTCTGGAAGATCCACCACACAGCACAACCTT | + |
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Preference number: 6 (lower is better) Translates to: GWEEIFNQLLQL*DSGRSTTQHNL Trigger: AAGGTTGTGCTGTGTGGTGGATCTTCCAGAATCCCAAAGCTGCAGCAGCTGATTAAAGATCTCTTCCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | TGTGCTAAGGTGTCTGTGAAATGTGCGCCCCCTATGTaGTCACTGGTGTTTGTGGAAAGGACCCGATACATC | + |
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Preference number: 6 (lower is better) Translates to: CAKVSVKCAPPM*SLVFVERTRYI Trigger: GATGTATCGGGTCCTTTCCACAAACACCAGTGACAACATAGGGGGCGCACATTTCACAGACACCTTAGCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | GAATCTACAAAGCAGTTGGCACTTCCCAAGGTTGACAGAGAATGCTaGGCCACTTCAGCGCTGTTCATCAATTTCATCATGGCTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ESTKQLALPKVDREC*ATSALFINFIMARA Trigger: TGCCCGAGCCATGATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | GTGAATCCAGTCTGGCGCAAGAGCTCCCGGATTGCTTCTGTACATTaGTTAAAAAGCGGAGAACAGAGCAGCTCAAATCTTGCTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VNPVWRKSSRIASVH*LKSGEQSSSNLALD Trigger: GTCCAGAGCAAGATTTGAGCTGCTCTGTTCTCCGCTTTTTAACAAATGTACAGAAGCAATCCGGGAGCTCTTGCGCCAGACTGGATTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | CAAGGAATCTACAAAGCAGTTGGCACTTCCCAAGGTTaGCAGAGAATGCTTGGCCACTTCAGCGCTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QGIYKAVGTSQG*QRMLGHFSAVH Trigger: ATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | AGCAGTTGGCACTTCCCAAGGTTGACAGAGAATGCTTaGCCACTTCAGCGCTGTTCATCAATTTCATCATGG | + |
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Preference number: 6 (lower is better) Translates to: SSWHFPRLTENA*PLQRCSSISSW Trigger: CCATGATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | TTCATCATGGCTCGGGCATTTCCTCTCACATCATGTTaGAACAACCTCTGGAACTCCGAAGCCAGGTACTGT | + |
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Preference number: 6 (lower is better) Translates to: FIMARAFPLTSC*NNLWNSEARYC Trigger: ACAGTACCTGGCTTCGGAGTTCCAGAGGTTGTTCAAACATGATGTGAGAGGAAATGCCCGAGCCATGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | TTTGGGATTCTGGAAGATCCACCACACAGCACAACCTaGTTGATATCATCTGCTGTGAATCCAGTCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: FGILEDPPHSTT*LISSAVNPVWR Trigger: GCGCCAGACTGGATTCACAGCAGATGATATCAACAAGGTTGTGCTGTGTGGTGGATCTTCCAGAATCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | AATCTGTCGGCACCTGACTCATCCACTCCCTTAACTAAAATATCCTaGGCTGAACACTCTATCATGACAGAGTCATCTCCTGACGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: NLSAPDSSTPLTKIS*AEHSIMTESSPDVL Trigger: GAGCACGTCAGGAGATGACTCTGTCATGATAGAGTGTTCAGCCAAGGATATTTTAGTTAAGGGAGTGGATGAGTCAGGTGCCGACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | ACAAAGCAGTTGGCACTTCCCAAGGTTGACAGAGAATaGTTGGCCACTTCAGCGCTGTTCATCAATTTCATC | + |
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Preference number: 6 (lower is better) Translates to: TKQLALPKVDRE*LATSALFINFI Trigger: GATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | ACAACCTTGTTGATATCATCTGCTGTGAATCCAGTCTaGCGCAAGAGCTCCCGGATTGCTTCTGTACATTTG | + |
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Preference number: 6 (lower is better) Translates to: TTLLISSAVNPV*RKSSRIASVHL Trigger: CAAATGTACAGAAGCAATCCGGGAGCTCTTGCGCCAGACTGGATTCACAGCAGATGATATCAACAAGGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | AAGCAGTTGGCACTTCCCAAGGTTGACAGAGAATGCTaGGCCACTTCAGCGCTGTTCATCAATTTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: KQLALPKVDREC*ATSALFINFIM Trigger: CATGATGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 72 bp | GTCTGGCGCAAGAGCTCCCGGATTGCTTCTGTACATTaGTTAAAAAGCGGAGAACAGAGCAGCTCAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: VWRKSSRIASVH*LKSGEQSSSNL Trigger: AAGATTTGAGCTGCTCTGTTCTCCGCTTTTTAACAAATGTACAGAAGCAATCCGGGAGCTCTTGCGCCAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | GACCTTCATACAAGGAATCTACAAAGCAGTTGGCACTTCCCAAGGTaGACAGAGAATGCTTGGCCACTTCAGCGCTGTTCATCAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: DLHTRNLQSSWHFPR*TENAWPLQRCSSIS Trigger: TGAAATTGATGAACAGCGCTGAAGTGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTCCTTGTATGAAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | GTCAAATGGGACAGTGACAACCACGTCATTTGCATCTaGGCCCAGGACAGAATGCGCTGTTTCTTTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: VKWDSDNHVICI*AQDRMRCFFHF Trigger: AAAATGAAAGAAACAGCGCATTCTGTCCTGGGCTCAGATGCAAATGACGTGGTTGTCACTGTCCCATTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CCA 72 bp | AGTCTTGACCTTCATACAAGGAATCTACAAAGCAGTTaGCACTTCCCAAGGTTGACAGAGAATGCTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLDLHTRNLQSS*HFPRLTENAWP Trigger: TGGCCAAGCATTCTCTGTCAACCTTGGGAAGTGCCAACTGCTTTGTAGATTCCTTGTATGAAGGTCAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | AGATGTATTTCTGAGCTTGTGGATCTGCAGAGCTTCTaGCAAGGATCTGTTTCACTTTCACTACTGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RCISELVDLQSF*QGSVSLSLLCL Trigger: CAAGCACAGTAGTGAAAGTGAAACAGATCCTTGGCAGAAGCTCTGCAGATCCACAAGCTCAGAAATACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS CAA 90 bp | ACAGAGCAGCTCAAATCTTGCTCTGGACACATTGCAATCAAAGTCTaGACCTTCATACAAGGAATCTACAAAGCAGTTGGCACTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: TEQLKSCSGHIAIKV*TFIQGIYKAVGTSQ Trigger: TTGGGAAGTGCCAACTGCTTTGTAGATTCCTTGTATGAAGGTCAAGACTTTGATTGCAATGTGTCCAGAGCAAGATTTGAGCTGCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | TCAATGACTAAGCATTTACTTTCTGAGATGTATTTCTaGGCTTGTGGATCTGCAGAGCTTCTGCCAAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SMTKHLLSEMYF*ACGSAELLPRI Trigger: GATCCTTGGCAGAAGCTCTGCAGATCCACAAGCTCAGAAATACATCTCAGAAAGTAAATGCTTAGTCATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS GCA 72 bp | TTTGTTAAAAAGCGGAGAACAGAGCAGCTCAAATCTTaGTCTGGACACATTGCAATCAAAGTCTTGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: FVKKRRTEQLKS*SGHIAIKVLTF Trigger: GAAGGTCAAGACTTTGATTGCAATGTGTCCAGAGCAAGATTTGAGCTGCTCTGTTCTCCGCTTTTTAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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| CDS TCA 72 bp | TCAAATCTTGCTCTGGACACATTGCAATCAAAGTCTTaGCCTTCATACAAGGAATCTACAAAGCAGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SNLALDTLQSKS*PSYKESTKQLA Trigger: TGCCAACTGCTTTGTAGATTCCTTGTATGAAGGTCAAGACTTTGATTGCAATGTGTCCAGAGCAAGATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027961.12 |
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