Pregenerated sensors for HSPA13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032932Ensembl transcript IDs: ENSMUST00000046283.16, ENSMUST00000114244.2, ENSMUST00000232633.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGCACTAACTTGGAGAGGCCAGGAGCCTCCATCAATCCCAGCTTaGATGGCCACTCCTGTCACCACTGCCAGGTCAGGGTCTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: KALTWRGQEPPSIPA*MATPVTTARSGSTD Trigger: ATCTGTAGACCCTGACCTGGCAGTGGTGACAGGAGTGGCCATCCAAGCTGGGATTGATGGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR GCA 90 bp | GGAGCCTCCATCAATCCCAGCTTGGATGGCCACTCCTGTCACCACTaGCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: GASINPSLDGHSCHH*QVRVYRCIRVLSKE Trigger: TTCTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGGAGTGGCCATCCAAGCTGGGATTGATGGAGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR CCA 90 bp | CACTCTATTCACATGGTGACCATCTCCTGGGGTGAGCTGGTCTTTTaGCAGTTCAGAGTCACCATTCTGAGGTTCCTTGCTGTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: HSIHMVTISWGELVF*QFRVTILRFLAVLP Trigger: GGGAAGGACAGCAAGGAACCTCAGAATGGTGACTCTGAACTGCCAAAAGACCAGCTCACCCCAGGAGATGGTCACCATGTGAATAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR CCA 90 bp | AGAAAGGCCAGGTCTAAACACTCTATTCACATGGTGACCATCTCCTaGGGTGAGCTGGTCTTTTGGCAGTTCAGAGTCACCATTCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RKARSKHSIHMVTIS*GELVFWQFRVTILR Trigger: CCTCAGAATGGTGACTCTGAACTGCCAAAAGACCAGCTCACCCCAGGAGATGGTCACCATGTGAATAGAGTGTTTAGACCTGGCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR TCA 90 bp | CTCTTGCTTTCAGAAAGGCCAGGTCTAAACACTCTATTCACATGGTaGCCATCTCCTGGGGTGAGCTGGTCTTTTGGCAGTTCAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: LLLSERPGLNTLFTW*PSPGVSWSFGSSES Trigger: TGACTCTGAACTGCCAAAAGACCAGCTCACCCCAGGAGATGGTCACCATGTGAATAGAGTGTTTAGACCTGGCCTTTCTGAAAGCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR TCA 90 bp | AGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGAACTCCTaGATAACTTGGCGGATCCGAGGAATACGAGTAGAACCCCCAACT | + |
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Preference number: 1 (lower is better) Translates to: RSGSTDVFGSFPKNS*ITWRIRGIRVEPPT Trigger: AGTTGGGGGTTCTACTCGTATTCCTCGGATCCGCCAAGTTATTCAGGAGTTCTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR CCA 90 bp | TTTTTGAGTGACTTCATGGACTCCTTTTCTGGAGGAGGCGTCACATaGAAATCCTTAACACGCCAAGACAGGGTCAGTTACCAGCACTCC | + |
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Preference number: 1 (lower is better) Translates to: FLSDFMDSFSGGGVT*KSLTRQDRVSYQHS Trigger: GGAGTGCTGGTAACTGACCCTGTCTTGGCGTGTTAAGGATTTCCATGTGACGCCTCCTCCAGAAAAGGAGTCCATGAAGTCACTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR TCA 90 bp | CAGAGTCACCATTCTGAGGTTCCTTGCTGTCCTTCCCCTCCACAGTaGGTAAAACTGATACCTGGGCAGACTGATGAATTGTCAAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: QSHHSEVPCCPSPPQ*VKLIPGQTDELSSL Trigger: TAAACTTGACAATTCATCAGTCTGCCCAGGTATCAGTTTTACTCACTGTGGAGGGGAAGGACAGCAAGGAACCTCAGAATGGTGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR CCA 90 bp | TTGGTTTTCTGTAAATGCTTATTGGGAATTTCCAAAGCACTAACTTaGAGAGGCCAGGAGCCTCCATCAATCCCAGCTTGGATGGCCACT | + |
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Preference number: 1 (lower is better) Translates to: LVFCKCLLGISKALT*RGQEPPSIPAWMAT Trigger: AGTGGCCATCCAAGCTGGGATTGATGGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTTGGAAATTCCCAATAAGCATTTACAGAAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR CCA 90 bp | CCAATAACCATCATGGAGAACAAGTGCAGCTTAATGGTGTTTGTTTaGACAAACAGGGCCTTTTGGCTCTTGTCTCTGTCTTGGGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: PITIMENKCSLMVFV*TNRAFWLLSLSWVN Trigger: ATTGACCCAAGACAGAGACAAGAGCCAAAAGGCCCTGTTTGTCCAAACAAACACCATTAAGCTGCACTTGTTCTCCATGATGGTTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| 3UTR TCA 90 bp | ACGTTTGATAGATCTCTTTATATAAATGCTGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTTTGTTGTTTCAGAAACGGTTTTATC | + |
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Preference number: 1 (lower is better) Translates to: TFDRSLYINAEAASD*SLVLQVCCFRNGFI Trigger: GATAAAACCGTTTCTGAAACAACAAACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTCAGCATTTATATAAAGAGATCTATCAAACGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR TCA 90 bp | ACGTTTGATAGATCTCTTTATATAAATGCTGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTTTGTTGTTTCTTTCAGATTCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: TFDRSLYINAEAASD*SLVLQVCCFFQILE Trigger: TTCTAGAATCTGAAAGAAACAACAAACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTCAGCATTTATATAAAGAGATCTATCAAACGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| 3UTR CAA 90 bp | CAAAGCACTAACTTGGAGAGGCCAGGAGCCTCCATCAATCCCAGCTaGGATGGCCACTCCTGTCACCACTGCCAGGTCAGGGTCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: QSTNLERPGASINPS*DGHSCHHCQVRVYR Trigger: TCTGTAGACCCTGACCTGGCAGTGGTGACAGGAGTGGCCATCCAAGCTGGGATTGATGGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAACATTCTGAGGTTCCTTaGTGTCCTTCCCCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: SCHHCQVRVYRCIRVLSKHSEVP*CPSPPQ Trigger: CTGTGGAGGGGAAGGACAGCAAGGAACCTCAGAATG...TTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGAATCTCCTGGGGTGAGCTaGTCTTTTGGCAGTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CHHCQVRVYRCIRVLSKESPGVS*SFGSSE Trigger: CTCTGAACTGCCAAAAGACCAGCTCACCCCAGGAGA...TTCTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAATTCCAGACTAGTAAGTaGGGATGGCTACCTACTTCC | + |
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Preference number: 2 (lower is better) Translates to: SCHHCQVRVYRCIRVLSKFQTSK*GWLPTS Trigger: GGAAGTAGGTAGCCATCCGCACTTACTAGTCTGGAA...TTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGGTGAGCTGGTCTTTTaGCAGTTCAGAGTCACCATT | + |
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Preference number: 2 (lower is better) Translates to: SCHHCQVRVYRCIRVLSKGELVF*QFRVTI Trigger: AATGGTGACTCTGAACTGCCAAAAGACCAGCTCACC...TTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGAAGGGCATCAAAGAGCTTaGGGGATACTTCTGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: CHHCQVRVYRCIRVLSKEGHQRA*GILLSQ Trigger: TTGAGACAGAAGTATCCCGCAAGCTCTTTGATGCCC...TTCTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGTCCAGCATTACTCTTTaGGAAGCTGAAGTGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGSSITL*EAEVLD Trigger: ATCAAGCACTTCAGCTTCCCAAAGAGTAATGCTGGA...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTGGGTCAATAGGAACTCAAGAATACCAGGTGCTCTTCTCTGACCACTGGGGATTTCCTCTTTCCTaGAAGGGAGAAAGCCGTACG | + |
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Preference number: 2 (lower is better) Translates to: CLGSIGTQEYQVLFSDHWGFPLS*KGESRT Trigger: CGTACGGCTTTCTCCCTTCCAGGAAAGAGGAAATCC...CCAGTGGTCAGAGAAGAGCACCTGGTATTCTTGAGTTCCTATTGACCCAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGGGTACGAGTATTTTCTaGAAGAGATCTTCATTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PVTTARSGSTDVFGSFPKGTSIF*KRSSLR Trigger: CCTCAATGAAGATCTCTTTCAGAAAATACTCGTACC...CTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGTTACATGGCAGTTGGTaGATACTATCTATGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: PVTTARSGSTDVFGSFPKLHGSW*ILSMQF Trigger: AAACTGCATAGATAGTATTCACCAACTGCCATGTAA...CTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGAAACAACATAACCAAAACCAAACAGCTGCTACAAATACCCAATGGTCTTCCTTCCCCTCCACAGTaGGTAAAACTGATACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RGNNITKTKQLLQIPNGLPSPPQ*VKLIPG Trigger: CCCAGGTATCAGTTTTACTCACTGTGGAGGGGAAGG...AAGACCATTGGGTATTTGTAGCAGCTGTTTGGTTTTGGTTATGTTGTTTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGTATTTTCTTCACTGGCCCTTGTGGCCATCTGGCTTGCTTGCTTCTTCTGAAAGAGATCTTCATTaGGGGCATCAAAGAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: IEYFLHWPLWPSGLLASSERDLH*GHQRAC Trigger: GCAAGCTCTTTGATGCCCTCAATGAAGATCTCTTTC...AGAAGAAGCAAGCAAGCCAGATGGCCACAAGGGCCAGTGAAGAAAATACTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGCATTTTATGTTTTTCTATCTACCTAATTGCATGCGCTTTGGTACATGGACTTCACTGGCCCTTGTaGCCATCTGGCTTGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: HGILCFSIYLIACALVHGLHWPL*PSGLLA Trigger: AGCAAGCAAGCCAGATGGCCACAAGGGCCAGTGAAG...TCCATGTACCAAAGCGCATGCAATTAGGTAGATAGAAAAACATAAAATGCCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR-3UTR GCA 90 bp | AGGGGAAACAACATAACCAAAACCAAACAGCTGCTACAAATACCCAATGGTCTTTGTGGCCATCTGGCTTaGTTGCTTCTTCTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RGNNITKTKQLLQIPNGLCGHLA*LLLLFS Trigger: GGAGAAGAGAAGAAGCAAGCAAGCCAGATGGCCACA...AAGACCATTGGGTATTTGTAGCAGCTGTTTGGTTTTGGTTATGTTGTTTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR CAA 90 bp | GCCAAGACAGGGTCAGTTACCAGCACTCCCTCAGTTCAGTTGAAGTaGGTTTTCTGTAAATGCTTATTGGGAATTTCCAAAGCACTAACT | + |
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Preference number: 2 (lower is better) Translates to: AKTGSVTSTPSVQLK*VFCKCLLGISKALT Trigger: AGTTAGTGCTTTGGAAATTCCCAATAAGCATTTACAGAAAACCAACTTCAACTGAACTGAGGGAGTGCTGGTAACTGACCCTGTCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | CACGGCATTTTATGTTTTTCTATCTACCTAATTGCATGCGCTTTGGTACATGGACTCCCTCTCAGCTTTTaGGACAGCAACAGGATCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGILCFSIYLIACALVHGLPLSF*DSNRIS Trigger: TGAGATCCTGTTGCTGTCTCAAAAGCTGAGAGGGAG...TCCATGTACCAAAGCGCATGCAATTAGGTAGATAGAAAAACATAAAATGCCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR-3UTR CCA 90 bp | ACCCAATGGTCTTGGATAGCAAAAACAAATGGAGAGAGTAATACAGCTTTATTGTCCAAAGCACTAACTTaGAGAGGCCAGGAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TQWSWIAKTNGESNTALLSKALT*RGQEPP Trigger: TGGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTTGGA...CAATAAAGCTGTATTACTCTCTCCATTTGTTTTTGCTATCCAAGACCATTGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGTATTTTCTTCACTGGCCCTTGTGGCCATCTGGCTTGCTTGCTTCTTCTAGGATCTCACTAAGTTaGCTATATTGGTCTAGAACT | + |
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Preference number: 2 (lower is better) Translates to: IEYFLHWPLWPSGLLASSRISLS*LYWSRT Trigger: AGTTCTAGACCAATATAGGCAACTTAGTGAGATCCT...AGAAGAAGCAAGCAAGCCAGATGGCCACAAGGGCCAGTGAAGAAAATACTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGTATTTTCTTCACTGGCCCTTGTGGCCATCTGGCTTGCTTGCTTCTTCTGCTACAAATACCCAATaGTCTTGGATAGCAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: IEYFLHWPLWPSGLLASSATNTQ*SWIAKT Trigger: TGTTTTTGCTATCCAAGACCATTGGGTATTTGTAGC...AGAAGAAGCAAGCAAGCCAGATGGCCACAAGGGCCAGTGAAGAAAATACTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAAGAGTATTTTCTTCACTaGCCCTTGTGGCCATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LQFKQGMFYYLAERDLNKEYFLH*PLWPSG Trigger: GCCAGATGGCCACAAGGGCCAGTGAAGAAAATACTC...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTATCTTTTGCTTGTAGCTTAATTCTGTCTCCAAGTTCCAATAACCATCATGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: PVSFACSLILSPSSNNHHEAASD*SLVLQV Trigger: AACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTC...ATGATGGTTATTGGAACTTGGAGACAGAATTAAGCTACAAGCAAAAGATACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGAAACAACATAACCAAAACCAAACAGCTGCTACAAATACCCAATGGTCTTTTGGGAATTTTTGAGTaGCTTCATGGACTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RGNNITKTKQLLQIPNGLLGIFE*LHGLLF Trigger: GAAAAGGAGTCCATGAAGTCACTCAAAAATTCCCAA...AAGACCATTGGGTATTTGTAGCAGCTGTTTGGTTTTGGTTATGTTGTTTCCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTCTGTCTCAAACAAAACCTGACTTTTTCCACTCTTGCTTTCAGAAAGGCCCTTGGGCCTCATAGTTaGCACTATTTAAAGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YFCLKQNLTFSTLAFRKALGPHS*HYLKFP Trigger: TGGAAACTTTAAATAGTGCCAACTATGAGGCCCAAG...GGCCTTTCTGAAAGCAAGAGTGGAAAAAGTCAGGTTTTGTTTGAGACAGAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATCCTTTTGGGAATTTTTaGGTGACTTCATGGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYPFGNF*VTSWTP Trigger: AGGAGTCCATGAAGTCACTCAAAAATTCCCAAAAGG...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAATACAAAGCAGAGGTGTaGAAATACAAGCAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: LQFKQGMFYYLAERDLNKYKAEV*KYKQKM Trigger: CATTTTCTGCTTGTATTTTCACACCTCTGCTTTGTA...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR CCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAAGCTACAAATACCCAATaGTCTTGGATAGCAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: LQFKQGMFYYLAERDLNKATNTQ*SWIAKT Trigger: TGTTTTTGCTATCCAAGACCATTGGGTATTTGTAGC...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGAATACAAGCAGAAAATaGCGCCCTGAAGATAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: KQMERVIQLYCDINALKRNTSRK*RPEDKK Trigger: CTTTTTATCTTCAGGGCGTCATTTTCTGCTTGTATT...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR GCA 72 bp | ATCAATCCCAGCTTGGATGGCCACTCCTGTCACCACTaGCAGGTCAGGGTCTACAGATGTATTCGGGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: INPSLDGHSCHH*QVRVYRCIRVL Trigger: AAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGGAGTGGCCATCCAAGCTGGGATTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR TCA 72 bp | TCAGAAAGGCCAGGTCTAAACACTCTATTCACATGGTaGCCATCTCCTGGGGTGAGCTGGTCTTTTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: SERPGLNTLFTW*PSPGVSWSFGS Trigger: ACTGCCAAAAGACCAGCTCACCCCAGGAGATGGTCACCATGTGAATAGAGTGTTTAGACCTGGCCTTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR TCA 72 bp | CATTCTGAGGTTCCTTGCTGTCCTTCCCCTCCACAGTaGGTAAAACTGATACCTGGGCAGACTGATGAATTG | + |
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Preference number: 3 (lower is better) Translates to: HSEVPCCPSPPQ*VKLIPGQTDEL Trigger: CAATTCATCAGTCTGCCCAGGTATCAGTTTTACTCACTGTGGAGGGGAAGGACAGCAAGGAACCTCAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| 3UTR CCA 72 bp | GGGCATCGCAAAGTCAACATAGAGTATTTTCTTCACTaGCCCTTGTGGCCATCTGGCTTGCTTGCTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GHRKVNIEYFLH*PLWPSGLLASS Trigger: AGAAGAAGCAAGCAAGCCAGATGGCCACAAGGGCCAGTGAAGAAAATACTCTATGTTGACTTTGCGATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGAAATACCCAATGGTCTaGGATAGCAAAAACAAATGG | + |
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Preference number: 3 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGKYPMV*DSKNKW Trigger: CCATTTGTTTTTGCTATCCAAGACCATTGGGTATTT...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR-3UTR CAA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGGATTTTGTTCATGTCTaGAGTTGTCATACATCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGDFVHV*SCHTSE Trigger: CTCAGATGTATGACAACTCAAGACATGAACAAAATC...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR TCA 72 bp | GTCAATAGGAACTCAAGAATACCAGGTGCTCTTCTCTaGCCACTGGCCCTCATAAGCACATCTTTTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VNRNSRIPGALL*PLALISTSFPH Trigger: ATGGGGAAAAGATGTGCTTATGAGGGCCAGTGGTCAGAGAAGAGCACCTGGTATTCTTGAGTTCCTATTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR CCA 72 bp | CCACCGCCTGTCTTAATCTGTGGATTTCCTCTTTCCTaGAAGGGAGAAAGCCGTACGTTTGATAGATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PPPVLICGFPLS*KGESRTFDRSL Trigger: AAGAGATCTATCAAACGTACGGCTTTCTCCCTTCCAGGAAAGAGGAAATCCACAGATTAAGACAGGCGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| 3UTR CCA 72 bp | TGTAAATGCTTATTGGGAATTTCCAAAGCACTAACTTaGAGAGGCCAGGAGCCTCCATCAATCCCAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CKCLLGISKALT*RGQEPPSIPAW Trigger: CCAAGCTGGGATTGATGGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTTGGAAATTCCCAATAAGCATTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR CCA 72 bp | TGGACAAACAGGGCCTTTTGGCTCTTGTCTCTGTCTTaGGTCAATAGGAACTCAAGAATACCAGGTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WTNRAFWLLSLS*VNRNSRIPGAL Trigger: AAGAGCACCTGGTATTCTTGAGTTCCTATTGACCCAAGACAGAGACAAGAGCCAAAAGGCCCTGTTTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGAATCTTGTCCTCCAAGTTaGTTGTTTCAGAAACGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CHHCQVRVYRCIRVLSKESCPPS*LFQKRF Trigger: AAACCGTTTCTGAAACAACAAACTTGGAGGACAAGA...TTCTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTGGGTCAATAGGAACTCAAGAATACCAGGTGCTCTTCTCTGACCACTGGCCTCTGATTGAAGTCTaGTCCTCCAAGTTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLGSIGTQEYQVLFSDHWPLIEV*SSKFVV Trigger: AACAACAAACTTGGAGGACAAGACTTCAATCAGAGG...CCAGTGGTCAGAGAAGAGCACCTGGTATTCTTGAGTTCCTATTGACCCAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCATCATCCTTTGTCCCAGCATTAGGATGTCACACCAATCACTCTGGCAGGTCTTGTCCTCCAAGTTaGTTGTTTCTTTCAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SASSFVPALGCHTNHSGRSCPPS*LFLSDS Trigger: AGAATCTGAAAGAAACAACAAACTTGGAGGACAAGA...CCTGCCAGAGTGATTGGTGTGACATCCTAATGCTGGGACAAAGGATGATGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR TCA 72 bp | TCTACAGATGTATTCGGGTCCTTTCCAAAGAACTCCTaGATAACTTGGCGGATCCGAGGAATACGAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: STDVFGSFPKNS*ITWRIRGIRVE Trigger: TTCTACTCGTATTCCTCGGATCCGCCAAGTTATTCAGGAGTTCTTTGGAAAGGACCCGAATACATCTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR GCA 72 bp | TGTCTCCAAGTTCCAATAACCATCATGGAGAACAAGTaGAGCTTAATGGTGTTTGTTTGGACAAACAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CLQVPITIMENK*SLMVFVWTNRA Trigger: GGCCCTGTTTGTCCAAACAAACACCATTAAGCTGCACTTGTTCTCCATGATGGTTATTGGAACTTGGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR CCA 72 bp | AGCTTAATGGTGTTTGTTTGGACAAACAGGGCCTTTTaGCTCTTGTCTCTGTCTTGGGTCAATAGGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLMVFVWTNRAF*LLSLSWVNRNS Trigger: TGAGTTCCTATTGACCCAAGACAGAGACAAGAGCCAAAAGGCCCTGTTTGTCCAAACAAACACCATTAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR TCA 72 bp | GAATGGGTACGAGTATTTTCTGAAAGAGATCTTCATTaGGGGCATCAAAGAGCTTGCGGGATACTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EWVRVFSERDLH*GHQRACGILLS Trigger: AGACAGAAGTATCCCGCAAGCTCTTTGATGCCCTCAATGAAGATCTCTTTCAGAAAATACTCGTACCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGTTTCTTCACTGGCCCTaGTGGCCATCTGGCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KQMERVIQLYCDINALKRFLHWP*WPSGLL Trigger: AAGCAAGCCAGATGGCCACAAGGGCCAGTGAAGAAA...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGCTTGCATTTCTAGGTTaGATCCTGGGAAAAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQMERVIQLYCDINALKRLAFLG*ILGKGE Trigger: TTCCCCTTTTCCCAGGATCAAACCTAGAAATGCAAG...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGAAACAACATAACCAAAACCAAACAGCTGCTACAAATACCCAATGGTCTTTGTCCTCCAAGTTTGTaGTTTCAGAAACGGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RGNNITKTKQLLQIPNGLCPPSL*FQKRFY Trigger: ATAAAACCGTTTCTGAAACAACAAACTTGGAGGACA...AAGACCATTGGGTATTTGTAGCAGCTGTTTGGTTTTGGTTATGTTGTTTCCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAACCTCTGATTGAAGTCTaGTCCTCCAAGTTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQFKQGMFYYLAERDLNKPLIEV*SSKFVV Trigger: AACAACAAACTTGGAGGACAAGACTTCAATCAGAGG...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR CCA 72 bp | CAAAACCAAACAGCTGCTACAAATACCCAATGGTCTTaGATAGCAAAAACAAATGGAGAGAGTAATACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QNQTAATNTQWS*IAKTNGESNTA Trigger: AGCTGTATTACTCTCTCCATTTGTTTTTGCTATCCAAGACCATTGGGTATTTGTAGCAGCTGTTTGGTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| 3UTR CCA 72 bp | GTTAATTGTAATGCACAACTTACAACTTCTCTTTCCTaGGTGCAACATCAACATCTTGGAATGGGAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VNCNAQLTTSLS*VQHQHLGMGIA Trigger: TGCTATTCCCATTCCAAGATGTTGATGTTGCACCCAGGAAAGAGAAGTTGTAAGTTGTGCATTACAATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGTGTGACATCAACGCTTaGAAAAGGCAACTGGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: KQMERVIQLYCDINALKRCDINA*KRQLVT Trigger: AGTTACCAGTTGCCTTTTCAAAGCGTTGATGTCACA...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| 3UTR TCA 72 bp | CAAAGATTCACAGTCTTGAATATTTTCACAATGCTGTaGAGGGCTCATCTTTGGCATTTCTCCATTAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QRFTVLNIFTML*RAHLWHFSISS Trigger: AGAACTAATGGAGAAATGCCAAAGATGAGCCCTTCACAGCATTGTGAAAATATTCAAGACTGTGAATCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| 3UTR TCA 72 bp | AAAGAAACTGTTCACATAAGAACTAGCTCTTCTAAATaGGAACTATGCAGAAAACTGCAGAAATGCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KETVHIRTSSSK*ELCRKLQKCQE Trigger: CTCCTGGCATTTCTGCAGTTTTCTGCATAGTTCTCATTTAGAAGAGCTAGTTCTTATGTGAACAGTTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| 3UTR TCA 72 bp | AGATCTCTTTATATAAATGCTGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTTTGTTGTTTCAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSLYINAEAASD*SLVLQVCCFRN Trigger: GTTTCTGAAACAACAAACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTCAGCATTTATATAAAGAGATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR GCA 72 bp | AGTACAAATTACATGGCAGTTGGTGAATACTATCTATaGAGTTTAATAATACTGCTATCTCCCAGCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: STNYMAVGEYYL*SLIILLSPSQC Trigger: ACACTGGCTGGGAGATAGCAGTATTATTAAACTGCATAGATAGTATTCACCAACTGCCATGTAATTTGTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| 3UTR CCA 72 bp | TACAACTTCTCTTTCCTGGGTGCAACATCAACATCTTaGAATGGGAATAGCACATGCAATAAATCTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YNFSFLGATSTS*NGNSTCNKSIL Trigger: CAAAATAGATTTATTGCATGTGCTATTCCCATTCCAAGATGTTGATGTTGCACCCAGGAAAGAGAAGTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| 3UTR TCA 72 bp | GCAAAAACAAATGGAGAGAGTAATACAGCTTTATTGTaGCATCAACGCTTTGAAAAGGCAACTGGTAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: AKTNGESNTALL*HQRFEKATGNF Trigger: AAAGTTACCAGTTGCCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTTTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| 3UTR TCA 72 bp | CTGGTGTCAGGATTAGGTACACATGACTCTAACAATTaGTTGAAGACAATTTCCTTCATGGTTTTAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: LVSGLGTHDSNN*LKTISFMVLTL Trigger: CAATGTTAAAACCATGAAGGAAATTGTCTTCAATCAATTGTTAGAGTCATGTGTACCTAATCCTGACACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTCTGGAGGAGGCGTCACATGGAAATCCTTAACACGCCAAGACAGGGTCCTGCAGGCACAGAAATaGCAGCATTGGCAACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSGGGVTWKSLTRQDRVLQAQK*QHWQPA Trigger: TGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAG...GACCCTGTCTTGGCGTGTTAAGGATTTCCATGTGACGCCTCCTCCAGAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTCTGGAGGAGGCGTCACATGGAAATCCTTAACACGCCAAGACAGGGTCCAATCCCAGCTTGGATaGCCACTCCTGTCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSGGGVTWKSLTRQDRVQSQLG*PLLSPL Trigger: CAGTGGTGACAGGAGTGGCCATCCAAGCTGGGATTG...GACCCTGTCTTGGCGTGTTAAGGATTTCCATGTGACGCCTCCTCCAGAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCCTCCATCAATCCCAGCTTGGATGGCCACTCCTGTCACCACTGCCAGGACTCTGGAGAAACGATaGTGGTTTCATTACTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEPPSIPAWMATPVTTARTLEKR*WFHYLS Trigger: TGACAAGTAATGAAACCATCATCGTTTCTCCAGAGT...CCTGGCAGTGGTGACAGGAGTGGCCATCCAAGCTGGGATTGATGGAGGCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTCTGGAGGAGGCGTCACATGGAAATCCTTAACACGCCAAGACAGGGTCCATTCTGAGGTTCCTTaGTGTCCTTCCCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSGGGVTWKSLTRQDRVHSEVP*CPSPPQ Trigger: CTGTGGAGGGGAAGGACAGCAAGGAACCTCAGAATG...GACCCTGTCTTGGCGTGTTAAGGATTTCCATGTGACGCCTCCTCCAGAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGCAACCGAACAGTAGGTaGTACCCAGGTCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGQPNSR*YPGQCQ Trigger: TTGGCATTGACCTGGGTACCACCTACTGTTCGGTTG...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGGGATTTCCTCTTTCCTaGAAGGGAGAAAGCCGTACG | + |
|
Preference number: 4 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGGFPLS*KGESRT Trigger: CGTACGGCTTTCTCCCTTCCAGGAAAGAGGAAATCC...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR TCA 90 bp | ATTGTCAAGTTTAGCTTGACCATCTCCACCGCCTGTCTTAATCTGTGGATTTCCACACATCACCGTCCGTaGAGGACACCATGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVKFSLTISTACLNLWISTHHRP*RTPCWG Trigger: TCCCCAGCATGGTGTCCTTCACGGACGGTGATGTGT...GGAAATCCACAGATTAAGACAGGCGGTGGAGATGGTCAAGCTAAACTTGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTGGCAGTTCAGAGTCACCATTCTGAGGTTCCTTGCTGTCCTTCCCCTCTCAGCCCAGCAAGGTTaGCAGCTTGGATTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFWQFRVTILRFLAVLPLSAQQG*QLGLLN Trigger: ATTCAACAATCCAAGCTGCCAACCTTGCTGGGCTGA...GAGGGGAAGGACAGCAAGGAACCTCAGAATGGTGACTCTGAACTGCCAAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTCAAGTTTAGCTTGACCATCTCCACCGCCTGTCTTAATCTGTGGATTTCCCTGCAGGCACAGAAATaGCAGCATTGGCAACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IVKFSLTISTACLNLWISLQAQK*QHWQPA Trigger: TGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAG...GGAAATCCACAGATTAAGACAGGCGGTGGAGATGGTCAAGCTAAACTTGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTCTGGAGGAGGCGTCACATGGAAATCCTTAACACGCCAAGACAGGGTCGAAAGAGATCTTCATTaGGGGCATCAAAGAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSGGGVTWKSLTRQDRVERDLH*GHQRAC Trigger: GCAAGCTCTTTGATGCCCTCAATGAAGATCTCTTTC...GACCCTGTCTTGGCGTGTTAAGGATTTCCATGTGACGCCTCCTCCAGAAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR CCA 90 bp | CCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGGCAAGGTTGGCAGCTTaGATTGTTGAATTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVTTARSGSTDVFGSFPKARLAA*IVEFLC Trigger: ACAGAGAAATTCAACAATCCAAGCTGCCAACCTTGC...CTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| 3UTR CAA 72 bp | TGTATTCGGGTCCTTTCCAAAGAACTCCTGAATAACTaGGCGGATCCGAGGAATACGAGTAGAACCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CIRVLSKELLNN*ADPRNTSRTPN Trigger: GTTGGGGGTTCTACTCGTATTCCTCGGATCCGCCAAGTTATTCAGGAGTTCTTTGGAAAGGACCCGAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAGGGCCTTTTGGCTCTTGTCTCTGTCTTGGGTCAATAGGAACTCAAGAACTCCACCCAAGTCTATaGCCAACACGTAGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: QTGPFGSCLCLGSIGTQELHPSL*PTRRTR Trigger: ACGTGTTCTACGTGTTGGTCATAGACTTGGGTGGAG...TTCTTGAGTTCCTATTGACCCAAGACAGAGACAAGAGCCAAAAGGCCCTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCTTTTGGCTCTTGTCTCTGTCTTGGGTCAATAGGAACTCAAGAATACCAGCTGGGGATGCTGATATaGCCGTTTTCATCTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GPFGSCLCLGSIGTQEYQLGMLI*PFSSGI Trigger: GATTCCAGATGAAAACGGGCATATCAGCATCCCCAG...CTGGTATTCTTGAGTTCCTATTGACCCAAGACAGAGACAAGAGCCAAAAGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAATGCCCGTTTTCATCTaGAATCACCTTCACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCHHCQVRVYRCIRVLSKMPVFI*NHLHFS Trigger: GGAAAAGTGAAGGTGATTCCAGATGAAAACGGGCAT...TTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAGTATTTTCTTCACTGGCCCTTGTGGCCATCTGGCTTGCTTGCTTCTTCTGGGCATCAAAGAGCTTaGGGGATACTTCTGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IEYFLHWPLWPSGLLASSGHQRA*GILLSQ Trigger: TTGAGACAGAAGTATCCCGCAAGCTCTTTGATGCCC...AGAAGAAGCAAGCAAGCCAGATGGCCACAAGGGCCAGTGAAGAAAATACTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR CCA 90 bp | AGGGGAAACAACATAACCAAAACCAAACAGCTGCTACAAATACCCAATGGTCTTCCATCAATCCCAGCTTaGATGGCCACTCCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGNNITKTKQLLQIPNGLPSIPA*MATPVT Trigger: GGTGACAGGAGTGGCCATCCAAGCTGGGATTGATGG...AAGACCATTGGGTATTTGTAGCAGCTGTTTGGTTTTGGTTATGTTGTTTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR TCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAAACACATCACCGTCCGTaGAGGACACCATGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQFKQGMFYYLAERDLNKTHHRP*RTPCWG Trigger: TCCCCAGCATGGTGTCCTTCACGGACGGTGATGTGT...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGACACATCACCGTCCGTaGAGGACACCATGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQMERVIQLYCDINALKRTHHRP*RTPCWG Trigger: TCCCCAGCATGGTGTCCTTCACGGACGGTGATGTGT...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| CDS-3UTR TCA 90 bp | GTTAATTGTAATGCACAACTTACAACTTCTCTTTCCTGGGTGCAACATCAACATCTGCAGGCACAGAAATaGCAGCATTGGCAACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNCNAQLTTSLSWVQHQHLQAQK*QHWQPA Trigger: TGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAG...ATGTTGATGTTGCACCCAGGAAAGAGAAGTTGTAAGTTGTGCATTACAATTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| CDS-3UTR CCA 90 bp | TGTAATGCACAACTTACAACTTCTCTTTCCTGGGTGCAACATCAACATCTTGGACAACCGAACAGTAGGTaGTACCCAGGTCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CNAQLTTSLSWVQHQHLGQPNSR*YPGQCQ Trigger: TTGGCATTGACCTGGGTACCACCTACTGTTCGGTTG...TCCAAGATGTTGATGTTGCACCCAGGAAAGAGAAGTTGTAAGTTGTGCATTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
||
| CDS-3UTR GCA 90 bp | TACTTCTGTCTCAAACAAAACCTGACTTTTTCCACTCTTGCTTTCAGAAAGGCCACCATAGGCCATCGCTaGTGCTGTAGGCTCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YFCLKQNLTFSTLAFRKATIGHR*CCRLIY Trigger: ATAAATGAGCCTACAGCAGCAGCGATGGCCTATGGT...GGCCTTTCTGAAAGCAAGAGTGGAAAAAGTCAGGTTTTGTTTGAGACAGAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGCACTCCTGTCACCACTaGCAGGTCAGGGTCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQMERVIQLYCDINALKRHSCHH*QVRVYR Trigger: TCTGTAGACCCTGACCTGGCAGTGGTGACAGGAGTG...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATTCTCCTGGGGTGAGCTaGTCTTTTGGCAGTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYSPGVS*SFGSSE Trigger: CTCTGAACTGCCAAAAGACCAGCTCACCCCAGGAGA...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATTCCAAAGCACTAACTTaGAGAGGCCAGGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYSKALT*RGQEPP Trigger: TGGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTTGGA...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR CAA 72 bp | ATGGTGTTTGTTTGGACAAACAGGGCCTTTTGGCTCTaGTCTCTGTCTTGGGTCAATAGGAACTCAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: MVFVWTNRAFWL*SLSWVNRNSRI Trigger: TATTCTTGAGTTCCTATTGACCCAAGACAGAGACAAGAGCCAAAAGGCCCTGTTTGTCCAAACAAACACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| CDS-3UTR TCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAACTCCACCCAAGTCTATaGCCAACACGTAGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: LQFKQGMFYYLAERDLNKLHPSL*PTRRTR Trigger: ACGTGTTCTACGTGTTGGTCATAGACTTGGGTGGAG...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR TCA 90 bp | ACCCAATGGTCTTGGATAGCAAAAACAAATGGAGAGAGTAATACAGCTTTATTGCTCCACCCAAGTCTATaGCCAACACGTAGAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: TQWSWIAKTNGESNTALLLHPSL*PTRRTR Trigger: ACGTGTTCTACGTGTTGGTCATAGACTTGGGTGGAG...CAATAAAGCTGTATTACTCTCTCCATTTGTTTTTGCTATCCAAGACCATTGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR CCA 90 bp | CACGGCATTTTATGTTTTTCTATCTACCTAATTGCATGCGCTTTGGTACATGGATCAGCCCAGCAAGGTTaGCAGCTTGGATTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGILCFSIYLIACALVHGSAQQG*QLGLLN Trigger: ATTCAACAATCCAAGCTGCCAACCTTGCTGGGCTGA...TCCATGTACCAAAGCGCATGCAATTAGGTAGATAGAAAAACATAAAATGCCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR TCA 90 bp | TACCTACTTCCAGAATCCAGGAGAGTTTTACTCAACTCTGTTACTTTAGAAATATCAGAGTCACCATTCTaGGGTTCCTTGCTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLPESRRVLLNSVTLEISESPF*GSLLSF Trigger: GAAGGACAGCAAGGAACCTCAGAATGGTGACTCTGA...TATTTCTAAAGTAACAGAGTTGAGTAAAACTCTCCTGGATTCTGGAAGTAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR GCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAACTGGGGATGCTGATATaGCCGTTTTCATCTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LQFKQGMFYYLAERDLNKLGMLI*PFSSGI Trigger: GATTCCAGATGAAAACGGGCATATCAGCATCCCCAG...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR GCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATCTGGGGATGCTGATATaGCCGTTTTCATCTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYLGMLI*PFSSGI Trigger: GATTCCAGATGAAAACGGGCATATCAGCATCCCCAG...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR GCA 90 bp | CTACAGTTTAAACAGGGCATGTTCTACTATCTGGCAGAAAGAGATCTGAATAAAACCATAGGCCATCGCTaGTGCTGTAGGCTCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQFKQGMFYYLAERDLNKTIGHR*CCRLIY Trigger: ATAAATGAGCCTACAGCAGCAGCGATGGCCTATGGT...TTTATTCAGATCTCTTTCTGCCAGATAGTAGAACATGCCCTGTTTAAACTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTCCTCCAAGTTTGTTGTTTCAGAAACGGTTTTATCTCAGCTATTATTGTCAACCGAACAGTAGGTaGTACCCAGGTCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCPPSLLFQKRFYLSYYCQPNSR*YPGQCQ Trigger: TTGGCATTGACCTGGGTACCACCTACTGTTCGGTTG...ACAATAATAGCTGAGATAAAACCGTTTCTGAAACAACAAACTTGGAGGACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| CDS-3UTR CCA 90 bp | CCTGTATCTTTTGCTTGTAGCTTAATTCTGTCTCCAAGTTCCAATAACCATCATTCAGCCCAGCAAGGTTaGCAGCTTGGATTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSFACSLILSPSSNNHHSAQQG*QLGLLN Trigger: ATTCAACAATCCAAGCTGCCAACCTTGCTGGGCTGA...ATGATGGTTATTGGAACTTGGAGACAGAATTAAGCTACAAGCAAAAGATACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| CDS-3UTR TCA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQMERVIQLYCDINALKREAASD*SLVLQV Trigger: AACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTC...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR TCA 90 bp | ACCCAATGGTCTTGGATAGCAAAAACAAATGGAGAGAGTAATACAGCTTTATTGTTTCCAAAGAACTCCTaGATAACTTGGCGGATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TQWSWIAKTNGESNTALLFPKNS*ITWRIR Trigger: TCGGATCCGCCAAGTTATTCAGGAGTTCTTTGGAAA...CAATAAAGCTGTATTACTCTCTCCATTTGTTTTTGCTATCCAAGACCATTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CCA 90 bp | GAAAGCCGTACGTTTGATAGATCTCTTTATATAAATGCTGAAGCAGCCTCTGATGCAAGGTTGGCAGCTTaGATTGTTGAATTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESRTFDRSLYINAEAASDARLAA*IVEFLC Trigger: ACAGAGAAATTCAACAATCCAAGCTGCCAACCTTGC...ATCAGAGGCTGCTTCAGCATTTATATAAAGAGATCTATCAAACGTACGGCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114244.2 ENSMUST00000232633.2 |
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| CDS-3UTR CCA 90 bp | AAACAAATGGAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTTGAAAAGGGGTGAGCTGGTCTTTTaGCAGTTCAGAGTCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: KQMERVIQLYCDINALKRGELVF*QFRVTI Trigger: AATGGTGACTCTGAACTGCCAAAAGACCAGCTCACC...CCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTCCATTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR TCA 90 bp | CACGGCATTTTATGTTTTTCTATCTACCTAATTGCATGCGCTTTGGTACATGGAGGTACGAGTATTTTCTaGAAGAGATCTTCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGILCFSIYLIACALVHGGTSIF*KRSSLR Trigger: CCTCAATGAAGATCTCTTTCAGAAAATACTCGTACC...TCCATGTACCAAAGCGCATGCAATTAGGTAGATAGAAAAACATAAAATGCCGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATATGCCCGTTTTCATCTaGAATCACCTTCACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYMPVFI*NHLHFS Trigger: GGAAAAGTGAAGGTGATTCCAGATGAAAACGGGCAT...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR CCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATGCAAGGTTGGCAGCTTaGATTGTTGAATTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYARLAA*IVEFLC Trigger: ACAGAGAAATTCAACAATCCAAGCTGCCAACCTTGC...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR TCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATACTCTGGAGAAACGATaGTGGTTTCATTACTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYTLEKR*WFHYLS Trigger: TGACAAGTAATGAAACCATCATCGTTTCTCCAGAGT...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR TCA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATGTCTCAAACAAAACCTaGCTTTTTCCACTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYVSNKT*LFPLLL Trigger: AAGCAAGAGTGGAAAAAGTCAGGTTTTGTTTGAGAC...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| 3UTR CAA 72 bp | GAGAGAGTAATACAGCTTTATTGTGACATCAACGCTTaGAAAAGGCAACTGGTAACTTTCTACTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERVIQLYCDINA*KRQLVTFYCLF Trigger: AAAAAGACAGTAGAAAGTTACCAGTTGCCTTTTCAAAGCGTTGATGTCACAATAAAGCTGTATTACTCTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGTTCCAAAGCACTAACTaGGAGAGGCCAGGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGFQSTN*ERPGAS Trigger: GGAGGCTCCTGGCCTCTCCAAGTTAGTGCTTTGGAA...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CAA 90 bp | GTCAGCATCATCCTTTGTCCCAGCATTAGGATGTCACACCAATCACTCTGGCAGACAGAAATGACAGCATaGGCAACCGGCATGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSIILCPSIRMSHQSLWQTEMTA*ATGMPR Trigger: CCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGT...CTGCCAGAGTGATTGGTGTGACATCCTAATGCTGGGACAAAGGATGATGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGGAACTCCTGAATAACTaGGCGGATCCGAGGAATACG | + |
|
Preference number: 5 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGELLNN*ADPRNT Trigger: CGTATTCCTCGGATCCGCCAAGTTATTCAGGAGTTC...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS TCA 90 bp | TTGTTGAATTTCTCTGTTGTAGGTCGAATTCTGCAGGCACAGAAATaGCAGCATTGGCAACCGGCATGCCGAGGTATTCCTCGGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLNFSVVGRILQAQK*QHWQPACRGIPRPS Trigger: AGATGGCCGAGGAATACCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAGAATTCGACCTACAACAGAGAAATTCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCAAGAGGACGTACTCTAAAACACAGAGCTATCCACTCAGGCCCCAGGGGTGGCAGCTTGGATTGTaGAATTTCTCTGTTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FCKRTYSKTQSYPLRPQGWQLGL*NFSVVG Trigger: ACCTACAACAGAGAAATTCAACAATCCAAGCTGCCA...CCCCTGGGGCCTGAGTGGATAGCTCTGTGTTTTAGAGTACGTCCTCTTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CAA 90 bp | TGTCACCACTGCCAGGTCAGGGTCTACAGATGTATTCGGGTCCTTTCCAAAGAATGGCAGCTTGGATTGTaGAATTTCTCTGTTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CHHCQVRVYRCIRVLSKEWQLGL*NFSVVG Trigger: ACCTACAACAGAGAAATTCAACAATCCAAGCTGCCA...TTCTTTGGAAAGGACCCGAATACATCTGTAGACCCTGACCTGGCAGTGGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114244.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTGGGTCAATAGGAACTCAAGAATACCAGGTGCTCTTCTCTGACCACTGGGGTTGGCAGCTTGGATaGTTGAATTTCTCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CLGSIGTQEYQVLFSDHWGWQLG*LNFSVV Trigger: TACAACAGAGAAATTCAACAATCCAAGCTGCCAACC...CCAGTGGTCAGAGAAGAGCACCTGGTATTCTTGAGTTCCTATTGACCCAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232633.2 |
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| CDS TCA 90 bp | TTAGCTTCAGCAGCAATCGAGAGCCGACAAACTCTGGAGAAACGATaGTGGTTTCATTACTTGTCACAGAAAACTCAGCCATCCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASAAIESRQTLEKR*WFHYLSQKTQPSHF Trigger: GAAATGGGATGGCTGAGTTTTCTGTGACAAGTAATGAAACCATCATCGTTTCTCCAGAGTTTGTCGGCTCTCGATTGCTGCTGAAGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
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| CDS-3UTR CAA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATACAGAAATGACAGCATaGGCAACCGGCATGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYTEMTA*ATGMPR Trigger: CCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGT...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS-3UTR CAA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATTCCATCAATCCCAGCTaGGATGGCCACTCCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYSINPS*DGHSCH Trigger: GTGACAGGAGTGGCCATCCAAGCTGGGATTGATGGA...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS-3UTR CAA 90 bp | TACCTACTTCCAGAATCCAGGAGAGTTTTACTCAACTCTGTTACTTTAGAAATAACAGAAATGACAGCATaGGCAACCGGCATGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YLLPESRRVLLNSVTLEITEMTA*ATGMPR Trigger: CCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGT...TATTTCTAAAGTAACAGAGTTGAGTAAAACTCTCCTGGATTCTGGAAGTAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
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| CDS TCA 90 bp | ACGTTTGATAGATCTCTTTATATAAATGCTGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTTTGTTGTTTCCAGACATCGCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFDRSLYINAEAASD*SLVLQVCCFQTSLV Trigger: CACGAGCGATGTCTGGAAACAACAAACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTCAGCATTTATATAAAGAGATCTATCAAACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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| CDS-3UTR CAA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATGGTTGGCAGCTTGGATaGTTGAATTTCTCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYGWQLG*LNFSVV Trigger: TACAACAGAGAAATTCAACAATCCAAGCTGCCAACC...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAATGGTCTTGGATAGCAAAAACAAATGGAGAGAGTAATACAGCTTTATTGGGTTGGCAGCTTGGATaGTTGAATTTCTCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TQWSWIAKTNGESNTALLGWQLG*LNFSVV Trigger: TACAACAGAGAAATTCAACAATCCAAGCTGCCAACC...CAATAAAGCTGTATTACTCTCTCCATTTGTTTTTGCTATCCAAGACCATTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 |
||
| CDS-3UTR CAA 90 bp | GCACACCCAAACAAGACTCATCTGGTCATATTCGATTCTAAAACAAAACACTATCCTCTGATTGAAGTCTaGTCCTCCAAGTTTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AHPNKTHLVIFDSKTKHYPLIEV*SSKFVV Trigger: AACAACAAACTTGGAGGACAAGACTTCAATCAGAGG...ATAGTGTTTTGTTTTAGAATCGAATATGACCAGATGAGTCTTGTTTGGGTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
||
| CDS CAA 72 bp | TGTAGGTCGAATTCTGCAGGCACAGAAATGACAGCATaGGCAACCGGCATGCCGAGGTATTCCTCGGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: CRSNSAGTEMTA*ATGMPRYSSAI Trigger: GATGGCCGAGGAATACCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAGAATTCGACCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS CAA 90 bp | TTTCTCTGTTGTAGGTCGAATTCTGCAGGCACAGAAATGACAGCATaGGCAACCGGCATGCCGAGGTATTCCTCGGCCATCTCCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLCCRSNSAGTEMTA*ATGMPRYSSAISFS Trigger: GCTAAAGGAGATGGCCGAGGAATACCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAGAATTCGACCTACAACAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS TCA 72 bp | TTCTCTGTTGTAGGTCGAATTCTGCAGGCACAGAAATaGCAGCATTGGCAACCGGCATGCCGAGGTATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FSVVGRILQAQK*QHWQPACRGIP Trigger: AGGAATACCTCGGCATGCCGGTTGCCAATGCTGTCATTTCTGTGCCTGCAGAATTCGACCTACAACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
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| CDS CAA 90 bp | GCTGTAGGCTCATTTATCACCCTCAAGATCTTCAGCCCAGCAAGGTaGGCAGCTTGGATTGTTGAATTTCTCTGTTGTAGGTCGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVGSFITLKIFSPAR*AAWIVEFLCCRSNS Trigger: AGAATTCGACCTACAACAGAGAAATTCAACAATCCAAGCTGCCAACCTTGCTGGGCTGAAGATCTTGAGGGTGATAAATGAGCCTACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS CCA 72 bp | ACCCTCAAGATCTTCAGCCCAGCAAGGTTGGCAGCTTaGATTGTTGAATTTCTCTGTTGTAGGTCGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLKIFSPARLAA*IVEFLCCRSNS Trigger: AGAATTCGACCTACAACAGAGAAATTCAACAATCCAAGCTGCCAACCTTGCTGGGCTGAAGATCTTGAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS CAA 72 bp | TCAAGATCTTCAGCCCAGCAAGGTTGGCAGCTTGGATaGTTGAATTTCTCTGTTGTAGGTCGAATTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRSSAQQGWQLG*LNFSVVGRILQ Trigger: CTGCAGAATTCGACCTACAACAGAGAAATTCAACAATCCAAGCTGCCAACCTTGCTGGGCTGAAGATCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046283.16 ENSMUST00000114244.2 ENSMUST00000232633.2 |
||
| CDS TCA 72 bp | AGATCTCTTTATATAAATGCTGAAGCAGCCTCTGATTaGAGTCTTGTCCTCCAAGTTTGTTGTTTCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: RSLYINAEAASD*SLVLQVCCFQT Trigger: TGTCTGGAAACAACAAACTTGGAGGACAAGACTTCAATCAGAGGCTGCTTCAGCATTTATATAAAGAGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046283.16 |
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