Pregenerated sensors for HSPA12B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074793Ensembl transcript IDs: ENSMUST00000099349.10, ENSMUST00000100763.9, ENSMUST00000127862.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCACCCAGGCGCCCACGGCCTGCAGTCCGGCTACTCAGGTCCATaGGCTGGTGCAGGCGAAGTTTCCGACAGTAGACAGAGGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: AHPGAHGLQSGYSGP*AGAGEVSDSRQRQP Trigger: AGGCTGCCTCTGTCTACTGTCGGAAACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCCGGACTGCAGGCCGTGGGCGCCTGGGTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | GGGTCCCGTGAGGCTGCTCCAACTGGTGTACCGTCAGGTCCACAGTaGCACCCCCGCAGTCGGCCACCATGTAGCGGTCTCCTTCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: GSREAAPTGVPSGPQ*HPRSRPPCSGLLLA Trigger: TGCAAGAAGGAGACCGCTACATGGTGGCCGACTGCGGGGGTGGCACTGTGGACCTGACGGTACACCAGTTGGAGCAGCCTCACGGGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | CCGGCCTCCACCAGGAAAGTTCGGCTGTGGCGAGACCTACGCAGCTaGTCCCGGGCATGTCGAAAGCTGGAGTCGATAGACCTCCGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PASTRKVRLWRDLRS*SRACRKLESIDLRS Trigger: TGAGCGGAGGTCTATCGACTCCAGCTTTCGACATGCCCGGGAGCAGCTGCGTAGGTCTCGCCACAGCCGAACTTTCCTGGTGGAGGCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | GGGCCACCGACTGCTCTGCTGCTACGAAGCGCTCAAAGACATCCGTaGACCAGCGGCGCCCATCCCGAACCAGCAATTTCTCGGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GPPTALLLRSAQRHP*TSGAHPEPAISRVG Trigger: ACCCACCCGAGAAATTGCTGGTTCGGGATGGGCGCCGCTGGTGCACGGATGTCTTTGAGCGCTTCGTAGCAGCAGAGCAGTCGGTGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | AAAGCTGGAGTCGATAGACCTCCGCTCACCCAGGCGCCCACGGCCTaGAGTCCGGCTACTCAGGTCCATGAGCTGGTGCAGGCGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: KAGVDRPPLTQAPTA*SPATQVHELVQAKF Trigger: AAACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCCGGACTGCAGGCCGTGGGCGCCTGGGTGAGCGGAGGTCTATCGACTCCAGCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR TCA 90 bp | CGCCTACTGCTCCATAGGGACCGCCAGAAGCCTTGTAGAGCTCCTTaGGGGTCCCGTGAGGCTGCTCCAACTGGTGTACCGTCAGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: RLLLHRDRQKPCRAP*GSREAAPTGVPSGP Trigger: TGGACCTGACGGTACACCAGTTGGAGCAGCCTCACGGGACCCTCAAGGAGCTCTACAAGGCTTCTGGCGGTCCCTATGGAGCAGTAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CCA 90 bp | ATCCGTGCACCAGCGGCGCCCATCCCGAACCAGCAATTTCTCGGGTaGGTGGTGGCCAGGCACAAAACGATTGAGCACGCCCACACCATA | + |
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Preference number: 1 (lower is better) Translates to: IRAPAAPIPNQQFLG*VVARHKTIEHAHTI Trigger: TATGGTGTGGGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTTCGGGATGGGCGCCGCTGGTGCACGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CCA 90 bp | TCTCAGTATCGCCAAACTGCATGGCAGCACGGATCTCACGGCGGCTaGGGGATGTGCCTGTGTTTTCCGGGCAGCCTTCAGGCTCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SQYRQTAWQHGSHGG*GMCLCFPGSLQAQA Trigger: AGCTTGAGCCTGAAGGCTGCCCGGAAAACACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGATACTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | TCAATGAAAGAGAAAGGAAGCGAAATGTTGAGCGCCCCCGCACGGTaGGGGCCTGCCGTGCGTTTGCGGGCCTCGAAGGCAATGGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: SMKEKGSEMLSAPAR*GPAVRLRASKAMVR Trigger: TCTAACCATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCCGCACCGTGCGGGGGCGCTCAACATTTCGCTTCCTTTCTCTTTCATTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | GTGCTGACATCCACGGCAGTGACCTTAATCTCAGTATCGCCAAACTaGATGGCAGCACGGATCTCACGGCGGCTGGGGGATGTGCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VLTSTAVTLISVSPN*MAARISRRLGDVPV Trigger: CACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGATACTGAGATTAAGGTCACTGCCGTGGATGTCAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR TCA 90 bp | GCATACACTCGCTCTGCTCTCTCAGCTCCTGAAGGGCGTGCTCCTTaGAGAAACGGAGGGCATGGGCAAACACTTCCAGAGCCAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: AYTRSALSAPEGRAP*RNGGHGQTLPEPAS Trigger: AGATGCTGGCTCTGGAAGTGTTTGCCCATGCCCTCCGTTTCTTCAAGGAGCACGCCCTTCAGGAGCTGAGAGAGCAGAGCGAGTGTATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR GCA 90 bp | CGGGCCTCGAAGGCAATGGTTAGATCCACCCAAGCTGCTGGCCGTTaGCTTTTGAATTTGGCAATGAAGTCCTCCCCGAATATGCGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RASKAMVRSTQAAGR*LLNLAMKSSPNMRQ Trigger: CTGCCGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR TCA 90 bp | GCCAGCAGCATCTCTATGTGTTGGATGATCCCACTGACCGTGGGTTaGAACAGCTCATTCATAGCCTCACAGGACATCCGGAGCATCCCC | + |
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Preference number: 1 (lower is better) Translates to: ASSISMCWMIPLTVG*NSSFIASQDIRSIP Trigger: GGGGATGCTCCGGATGTCCTGTGAGGCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGATGCTGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR TCA 90 bp | TCTGAACTCAGGACCTTCGGAAGAGCAGTTGGTGCTCTTAACCGCTaGGCCATCTCTTCAGCCCCCTGTCCCATGATTATTTCTAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: SELRTFGRAVGALNR*AISSAPCPMIISKS Trigger: GCTCTTAGAAATAATCATGGGACAGGGGGCTGAAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| 3UTR TCA 90 bp | TCAGACACACCAGAAGAGGGCCTCAGATCTTGTTACAGATGGTTTTaGGCCACCACATCCCTTTCTGTGTTGCTGGGATCTGAACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEGLRSCYRWF*ATTSLSVLLGSELR Trigger: CCTGAGTTCAGATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATCTGAGGCCCTCTTCTGGTGTGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| 3UTR GCA 90 bp | GATCTTGTTACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTaGTGGGATCTGAACTCAGGACCTTCGGAAGAGCAGTTGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: DLVTDGFEPPHPFLC*WDLNSGPSEEQLVL Trigger: GAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| 3UTR GCA 90 bp | CTTTCCTGTAGGTCCTTTGAGCATGCTGTGTCCACATCTCCAAACTaGTTTCACTGTGGCAGTGCAGCCACAATTAACAGTCACACCTCC | + |
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Preference number: 1 (lower is better) Translates to: LSCRSFEHAVSTSPN*FHCGSAATINSHTS Trigger: GGAGGTGTGACTGTTAATTGTGGCTGCACTGCCACAGTGAAAGCAGTTTGGAGATGTGGACACAGCATGCTCAAAGGACCTACAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR TCA 90 bp | CTTGCCACAGTAACTCTGTCCTCCTGTGACTGGGTTGGGGGCAAATaGGTCATTTATAGCTTTCCTGTAGGTCCTTTGAGCATGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LATVTLSSCDWVGGK*VIYSFPVGPLSMLC Trigger: ACACAGCATGCTCAAAGGACCTACAGGAAAGCTATAAATGACTCATTTGCCCCCAACCCAGTCACAGGAGGACAGAGTTACTGTGGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR TCA 90 bp | GAGGAGAGCGACAACTCCTTGCCATGTCCCTTTGATCTGTGTAGCTaGCAACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAG | + |
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Preference number: 1 (lower is better) Translates to: EESDNSLPCPFDLCS*QPSSIIHTLIPLME Trigger: CTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGTTGTCAGCTACACAGATCAAAGGGACATGGCAAGGAGTTGTCGCTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR TCA 90 bp | GCCATGGTTGGCAGGAAATGTCTGACATTTCACACTTGGAGAAACTaGTTGGTCAGATTTCCTAATGGTATACTGATATGTGGCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: AMVGRKCLTFHTWRN*LVRFPNGILICGRA Trigger: AGCTCTGCCACATATCAGTATACCATTAGGAAATCTGACCAATCAGTTTCTCCAAGTGTGAAATGTCAGACATTTCCTGCCAACCATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR GCA 90 bp | ACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTaGTCTGGTAGTTCTAGAAGGCTGTTCTTTTCCTTACCTTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: TVFYYSYTNPTYGGP*SGSSRRLFFSLPCK Trigger: TTTGCAAGGTAAGGAAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCCGGGCGCGCAGGACAGTAGCTGCGCCTTACCTCCTCTCCTAGGGCCACCGTCCTTGAGGGTCCCGTaGGGCTGCTCCAACTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GPGAQDSSCALPPLLGPPSLRVP*GCSNWC Trigger: ACACCAGTTGGAGCAGCCTCACGGGACCCTCAAGGA...CGGTGGCCCTAGGAGAGGAGGTAAGGCGCAGCTACTGTCCTGCGCGCCCGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CAA 90 bp | AGCGAAATGTTGAGCGCCCCCGCACGGTGCGGGCCTGCCGTGCGTTaGCGGGCCTCGAAGGCAATGGTTAGATCCACCCAAGCTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SEMLSAPARCGPAVR*RASKAMVRSTQAAG Trigger: GCCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCCGCACCGTGCGGGGGCGCTCAACATTTCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR GCA 90 bp | CACGAGGTTCACACTGCTCCTGCGCAGGGCGGTCTCCACATTGTGCCCTCGTTGCAGGCGCCCACGGCCTaGAGTCCGGCTACTCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HEVHTAPAQGGLHIVPSLQAPTA*SPATQV Trigger: GACCTGAGTAGCCGGACTGCAGGCCGTGGGCGCCTG...CAACGAGGGCACAATGTGGAGACCGCCCTGCGCAGGAGCAGTGTGAACCTCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCACACCAGGGTCAGTGATGAAGCGCGCATCCTCCGCAGCGCAGCAGTACCTGGTGGGCCACGCCTaGGTCCCCTCCCTCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: LRTPGSVMKRASSAAQQYLVGHA*VPSLPF Trigger: AAATGGGAGGGAGGGGACCCAGGCGTGGCCCACCAG...GTACTGCTGCGCTGCGGAGGATGCGCGCTTCATCACTGACCCTGGTGTGCGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCTGCTACGAAGCGCTCAAAGACATCCGTGCACCAGCGGCGCCCATCCCCCTTGTAGAGCTCCTTaGGGGTCCCGTGAGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ALLLRSAQRHPCTSGAHPPCRAP*GSREAA Trigger: AGCAGCCTCACGGGACCCTCAAGGAGCTCTACAAGG...GGGATGGGCGCCGCTGGTGCACGGATGTCTTTGAGCGCTTCGTAGCAGCAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCGCTCAAAGACATCCGTGCACCAGCGGCGCCCATCCCGAACCAGCAATTTCCCGTCAGGTCCACAGTaGCACCCCCGCAGTCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KRSKTSVHQRRPSRTSNFPSGPQ*HPRSRP Trigger: TGGCCGACTGCGGGGGTGGCACTGTGGACCTGACGG...GAAATTGCTGGTTCGGGATGGGCGCCGCTGGTGCACGGATGTCTTTGAGCGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCGTTTGCGGGCCTCGAAGGCAATGGTTAGATCCACCCAAGCTGCTGGCCGTGAAGGGCGTGCTCCTTaGAGAAACGGAGGGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: VRLRASKAMVRSTQAAGREGRAP*RNGGHG Trigger: CCCATGCCCTCCGTTTCTTCAAGGAGCACGCCCTTC...ACGGCCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCCGCAAACGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAGTTCGGCTGTGGCGAGACCTACGCAGCTGCTCCCGGGCATGTCGAAAGTGCTCTCTCAGCTCCTaGAGGGCGTGCTCCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RKVRLWRDLRSCSRACRKCSLSS*RACSLK Trigger: CTTCAAGGAGCACGCCCTTCAGGAGCTGAGAGAGCA...CTTTCGACATGCCCGGGAGCAGCTGCGTAGGTCTCGCCACAGCCGAACTTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR TCA 90 bp | CAACGCGCAGGCCACGAGTGCCCAGGGCTTCCTGCACCGCGTGCTGCAGCACCGTGCGGTAGAAGTCAATaGAAGAGAAAGGAAGCGAAA | + |
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Preference number: 2 (lower is better) Translates to: QRAGHECPGLPAPRAAAPCGRSQ*KRKEAK Trigger: TTTCGCTTCCTTTCTCTTTCATTGACTTCTACCGCA...CGGTGCTGCAGCACGCGGTGCAGGAAGCCCTGGGCACTCGTGGCCTGCGCGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAATGAAAGAGAAAGGAAGCGAAATGTTGAGCGCCCCCGCACGGTGCGGGCCTCAGCAGCAGGCAAGTaGGGGTCTTCTGGTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VNERERKRNVERPRTVRASAAGK*GSSGGP Trigger: TGGCCCACCAGAAGACCCCCACTTGCCTGCTGCTGA...GGCCCGCACCGTGCGGGGGCGCTCAACATTTCGCTTCCTTTCTCTTTCATTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGCCAAACTGCATGGCAGCACGGATCTCACGGCGGCTGGGGGATGTGCCTGTCAGCAATTTCTCGGGTaGGTGGTGGCCAGGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: IAKLHGSTDLTAAGGCACQQFLG*VVARHK Trigger: TTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTG...ACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CAA 90 bp | GTACTGCGCCACACTGCGGCACCTGTACGAGGACACGGATGCCTTTaGGGTCTTGGGACTAGTTGCTTGAGTGGGGAGGTGTCTAGGACG | + |
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Preference number: 2 (lower is better) Translates to: VLRHTAAPVRGHGCL*GLGTSCLSGEVSRT Trigger: CGTCCTAGACACCTCCCCACTCAAGCAACTAGTCCCAAGACCCAAAAGGCATCCGTGTCCTCGTACAGGTGCCGCAGTGTGGCGCAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR-3UTR TCA 90 bp | ATCGCCAAACTGCATGGCAGCACGGATCTCACGGCGGCTGGGGGATGTGCCTGTGCTGGGTCTTCAAGGTaGGATCAGTGGCACTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IAKLHGSTDLTAAGGCACAGSSR*DQWHCE Trigger: TTCACAGTGCCACTGATCTCACCTTGAAGACCCAGC...ACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCACACCAGGGTCAGTGATGAAGCGCGCATCCTCCGCAGCGCAGCAGTACGTGAAAGATGCCTTCTaGGGTCAGCAGCAGGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LRTPGSVMKRASSAAQQYVKDAF*GQQQAS Trigger: ACTTGCCTGCTGCTGACCCCAGAAGGCATCTTTCAC...GTACTGCTGCGCTGCGGAGGATGCGCGCTTCATCACTGACCCTGGTGTGCGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCAGTCCGGCTACTCAGGTCCATGAGCTGGTGCAGGCGAAGTTTCCGACACCGGTTGTTTCCAGATaGCAGGTACTGTCAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: ACSPATQVHELVQAKFPTPVVSR*QVLSAP Trigger: GGGTGCTGACAGTACCTGCCATCTGGAAACAACCGG...TGTCGGAAACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCCGGACTGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR GCA 90 bp | CACGCCTACTGCTCCATAGGGACCGCCAGAAGCCTTGTAGAGCTCCTTGAGGGTAGGTCCATGAGCTGGTaGAGGCGAAGTTTCCGACAG | + |
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Preference number: 2 (lower is better) Translates to: HAYCSIGTARSLVELLEGRSMSW*RRSFRQ Trigger: CTGTCGGAAACTTCGCCTGCACCAGCTCATGGACCT...ACCCTCAAGGAGCTCTACAAGGCTTCTGGCGGTCCCTATGGAGCAGTAGGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGAAGAAACGGAGGGCATGGGCAAACACTTCCAGAGCCAGCATCTTCTTCCAAGTGGGGGTCTTCTaGTGGGCCACGCCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SLKKRRAWANTSRASIFFQVGVF*WATPGS Trigger: GGACCCAGGCGTGGCCCACCAGAAGACCCCCACTTG...GAAGAAGATGCTGGCTCTGGAAGTGTTTGCCCATGCCCTCCGTTTCTTCAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCACAATTAACAGTCACACCTCCAGGAAGGTGCTACTCACACCTGTCCCTCCTTCAGTCCCGGTTCTaGACCCCCTCCCAATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QPQLTVTPPGRCYSHLSLLQSRF*TPSQSH Trigger: GTGGGATTGGGAGGGGGTGCAGAACCGGGACTGAAG...GAGGGACAGGTGTGAGTAGCACCTTCCTGGAGGTGTGACTGTTAATTGTGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCAGTCCGGCTACTCAGGTCCATGAGCTGGTGCAGGCGAAGTTTCCGACACAAAACTGTGAAAGATaGCTTCTGGGGTCAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ACSPATQVHELVQAKFPTQNCER*LLGSAA Trigger: TGCTGCTGACCCCAGAAGGCATCTTTCACAGTTTTG...TGTCGGAAACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCCGGACTGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR GCA 90 bp | CACGAGGTTCACACTGCTCCTGCGCAGGGCGGTCTCCACATTGTGCCCTCGTTGAATGAGGAGTTTCTCTaGATCCTCTCGAGACACCAA | + |
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Preference number: 2 (lower is better) Translates to: HEVHTAPAQGGLHIVPSLNEEFL*ILSRHQ Trigger: TTGGTGTCTCGAGAGGATGCAGAGAAACTCCTCATT...CAACGAGGGCACAATGTGGAGACCGCCCTGCGCAGGAGCAGTGTGAACCTCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGCTCCATAGGGACCGCCAGAAGCCTTGTAGAGCTCCTTGAGGGTCCCGTGTTTACCGCCTCGAGCTaGGTCTTCAAGGTGAGATCA | + |
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Preference number: 2 (lower is better) Translates to: YCSIGTARSLVELLEGPVFTASS*VFKVRS Trigger: TGATCTCACCTTGAAGACCCAGCTCGAGGCGGTAAA...CACGGGACCCTCAAGGAGCTCTACAAGGCTTCTGGCGGTCCCTATGGAGCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CAA 90 bp | TTTCTGTGTTGCTGGGATCTGAACTCAGGACCTTCGGAAGAGCAGTaGGTGCTCTTAACCGCTGAGCCATCTCTTCAGCCCCCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FLCCWDLNSGPSEEQ*VLLTAEPSLQPPVP Trigger: TGGGACAGGGGGCTGAAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCAACACAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| 3UTR CAA 90 bp | CACCCTCAGTTGGAAAGAAAGTCGATGGCTGCCCGCACAGAGCGATaGGTGCTGACATCCACGGCAGTGACCTTAATCTCAGTATCGCCA | + |
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Preference number: 2 (lower is better) Translates to: HPQLERKSMAARTER*VLTSTAVTLISVSP Trigger: TGGCGATACTGAGATTAAGGTCACTGCCGTGGATGTCAGCACCAATCGCTCTGTGCGGGCAGCCATCGACTTTCTTTCCAACTGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCTGGCCGTTGCCTTTTGAATTTGGCAATGAAGTCCTCCCCGAATATGCGGGCTACTCAGGTCCATaGGCTGGTGCAGGCGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SCWPLPFEFGNEVLPEYAGYSGP*AGAGEV Trigger: AACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCC...CGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTTCTCGGGTGGGTGGTGGCCAGGCACAAAACGATTGAGCACGCCCACACCAGCATCTCTATGTGTTaGATGATCCCACTGACCGTG | + |
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Preference number: 2 (lower is better) Translates to: QFLGWVVARHKTIEHAHTSISMC*MIPLTV Trigger: CACGGTCAGTGGGATCATCCAACACATAGAGATGCT...GGTGTGGGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CAA 90 bp | GCAATGGTTAGATCCACCCAAGCTGCTGGCCGTTGCCTTTTGAATTaGGCAATGAAGTCCTCCCCGAATATGCGGCAGAGCAGCTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: AMVRSTQAAGRCLLN*AMKSSPNMRQSSCS Trigger: TGAGCAGCTGCTCTGCCGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGATCTAACCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CAA 90 bp | TCGAAGGCAATGGTTAGATCCACCCAAGCTGCTGGCCGTTGCCTTTaGAATTTGGCAATGAAGTCCTCCCCGAATATGCGGCAGAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SKAMVRSTQAAGRCL*NLAMKSSPNMRQSS Trigger: GCTGCTCTGCCGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CAA 90 bp | AGCCAGCAGCATCTCTATGTGTTGGATGATCCCACTGACCGTGGGTaGAAACAGCTCATTCATAGCCTCACAGGACATCCGGAGCATCCC | + |
|
Preference number: 2 (lower is better) Translates to: SQQHLYVLDDPTDRG*KQLIHSLTGHPEHP Trigger: GGGATGCTCCGGATGTCCTGTGAGGCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGATGCTGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGCAGCATCTCTATGTGTTGGATGATCCCACTGACCGTGGGTTGAAACAGAGTCCTCCCCGAATATaGGGCAGAGCAGCTGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SQQHLYVLDDPTDRGLKQSPPRI*GRAAAQ Trigger: TTGAGCAGCTGCTCTGCCGCATATTCGGGGAGGACT...CTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGATGCTGCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CAA 90 bp | GTTCACACTGCTCCTGCGCAGGGCGGTCTCCACATTGTGCCCTCGTaGCTTGCGGTAGAAGTCAATGAAAGAGAAAGGAAGCGAAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: VHTAPAQGGLHIVPS*LAVEVNERERKRNV Trigger: AACATTTCGCTTCCTTTCTCTTTCATTGACTTCTACCGCAAGCAACGAGGGCACAATGTGGAGACCGCCCTGCGCAGGAGCAGTGTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CAA 90 bp | CTTCACACCCTGCACCTCAGGCTTAGCCAGCAGCATCTCTATGTGTaGGATGATCCCACTGACCGTGGGTTGAAACAGCTCATTCATAGC | + |
|
Preference number: 2 (lower is better) Translates to: LHTLHLRLSQQHLYV*DDPTDRGLKQLIHS Trigger: GCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGATGCTGCTGGCTAAGCCTGAGGTGCAGGGTGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCAGATCTTGTTACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTGCCAGCCCCCTGTCCCATaGTTATTTCTAAGAGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ASDLVTDGFEPPHPFLCCQPPVP*LFLRAG Trigger: GCCTGCTCTTAGAAATAATCATGGGACAGGGGGCTG...GCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATCTGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR CAA 90 bp | TACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCCTCAGATCTaGTTACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YTVAVFRHTRRGPQI*LQMVLSHHIPFCVA Trigger: AGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATCTGAGGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGGAAATGAGATTACTCTCTTaGGCTTCCTGTGGCTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LRISSQAGKAVLRHGWQEMRLLS*ASCGLN Trigger: GTTCAAGCCACAGGAAGCCCAAGAGAGTAATCTCAT...TTCCTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR-3UTR TCA 90 bp | CATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTTTCCTAATGGTATACTaGTATGTGGCAGAGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HTLIPLMEVPALVVLEGCFLMVY*YVAELE Trigger: TTCCAGCTCTGCCACATATCAGTATACCATTAGGAA...ACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR-3UTR CCA 90 bp | TATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGATGCAGTCTATCTTCGTaGTCACACACTCGCCAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YYSYTNPTYGGPCSGSSRCSLSS*SHTRQA Trigger: GGCTTGGCGAGTGTGTGACCACGAAGATAGACTGCA...TCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR GCA 72 bp | GTCGATAGACCTCCGCTCACCCAGGCGCCCACGGCCTaGAGTCCGGCTACTCAGGTCCATGAGCTGGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VDRPPLTQAPTA*SPATQVHELVQ Trigger: CTGCACCAGCTCATGGACCTGAGTAGCCGGACTGCAGGCCGTGGGCGCCTGGGTGAGCGGAGGTCTATCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | GAGAAAGGAAGCGAAATGTTGAGCGCCCCCGCACGGTaGGGGCCTGCCGTGCGTTTGCGGGCCTCGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EKGSEMLSAPAR*GPAVRLRASKA Trigger: TGCCTTCGAGGCCCGCAAACGCACGGCAGGCCCGCACCGTGCGGGGGCGCTCAACATTTCGCTTCCTTTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCGCACACCAGGGTCAGTGATGAAGCGCGCATCCTCCGCAGCGCAGCAGTACGGGCCTGCCGTGCGTTaGCGGGCCTCGAAGGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: LRTPGSVMKRASSAAQQYGPAVR*RASKAM Trigger: CATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCC...GTACTGCTGCGCTGCGGAGGATGCGCGCTTCATCACTGACCCTGGTGTGCGCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | GAGGCTGCTCCAACTGGTGTACCGTCAGGTCCACAGTaGCACCCCCGCAGTCGGCCACCATGTAGCGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EAAPTGVPSGPQ*HPRSRPPCSGL Trigger: GAGACCGCTACATGGTGGCCGACTGCGGGGGTGGCACTGTGGACCTGACGGTACACCAGTTGGAGCAGCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CCA 72 bp | TCTCCCACACCGGCCTCCACCAGGAAAGTTCGGCTGTaGCGAGACCTACGCAGCTGCTCCCGGGCATGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: SPTPASTRKVRL*RDLRSCSRACR Trigger: TCGACATGCCCGGGAGCAGCTGCGTAGGTCTCGCCACAGCCGAACTTTCCTGGTGGAGGCCGGTGTGGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR TCA 72 bp | GGCGCCCACGGCCTGCAGTCCGGCTACTCAGGTCCATaGGCTGGTGCAGGCGAAGTTTCCGACAGTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: GAHGLQSGYSGP*AGAGEVSDSRQ Trigger: CTGTCTACTGTCGGAAACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCCGGACTGCAGGCCGTGGGCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | GCATGGCAGCACGGATCTCACGGCGGCTGGGGGATGTaGCTGTGTTTTCCGGGCAGCCTTCAGGCTCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AWQHGSHGGWGM*LCFPGSLQAQA Trigger: AGCTTGAGCCTGAAGGCTGCCCGGAAAACACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CCA 72 bp | GCGGGCCTGCCGTGCGTTTGCGGGCCTCGAAGGCAATaGTTAGATCCACCCAAGCTGCTGGCCGTTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AGLPCVCGPRRQ*LDPPKLLAVAF Trigger: AAAGGCAACGGCCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CCA 72 bp | CCAGCGGCGCCCATCCCGAACCAGCAATTTCTCGGGTaGGTGGTGGCCAGGCACAAAACGATTGAGCACGCC | + |
|
Preference number: 3 (lower is better) Translates to: PAAPIPNQQFLG*VVARHKTIEHA Trigger: GGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTTCGGGATGGGCGCCGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CCA 72 bp | CGCCAAACTGCATGGCAGCACGGATCTCACGGCGGCTaGGGGATGTGCCTGTGTTTTCCGGGCAGCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RQTAWQHGSHGG*GMCLCFPGSLQ Trigger: CTGAAGGCTGCCCGGAAAACACAGGCACATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CCA 72 bp | CGGCGCCCATCCCGAACCAGCAATTTCTCGGGTGGGTaGTGGCCAGGCACAAAACGATTGAGCACGCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RRPSRTSNFSGG*WPGTKRLSTPT Trigger: TGTGGGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTTCGGGATGGGCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR TCA 72 bp | CTCCATAGGGACCGCCAGAAGCCTTGTAGAGCTCCTTaGGGGTCCCGTGAGGCTGCTCCAACTGGTGTACCG | + |
|
Preference number: 3 (lower is better) Translates to: LHRDRQKPCRAP*GSREAAPTGVP Trigger: CGGTACACCAGTTGGAGCAGCCTCACGGGACCCTCAAGGAGCTCTACAAGGCTTCTGGCGGTCCCTATGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CCA 72 bp | CGCCCATCCCGAACCAGCAATTTCTCGGGTGGGTGGTaGCCAGGCACAAAACGATTGAGCACGCCCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: RPSRTSNFSGGW*PGTKRLSTPTP Trigger: TGGTGTGGGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTTCGGGATGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | ACCAGGAAAGTTCGGCTGTGGCGAGACCTACGCAGCTaGTCCCGGGCATGTCGAAAGCTGGAGTCGATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TRKVRLWRDLRS*SRACRKLESID Trigger: GTCTATCGACTCCAGCTTTCGACATGCCCGGGAGCAGCTGCGTAGGTCTCGCCACAGCCGAACTTTCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | GCAGAGCAGCTGCTCAAAGGCCAAGTCCACGCCTACTaGTCCATAGGGACCGCCAGAAGCCTTGTAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AEQLLKGQVHAY*SIGTARSLVEL Trigger: GAGCTCTACAAGGCTTCTGGCGGTCCCTATGGAGCAGTAGGCGTGGACTTGGCCTTTGAGCAGCTGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGCAATTTCTCGGGTGGGTGGTGGCCAGGCACAAAACGATTGAGCACGCCGTAGCGGTCTCCTTCTaGCATCTCTGCCCACAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NQQFLGWVVARHKTIEHAVAVSF*HLCPQL Trigger: GAGCTGTGGGCAGAGATGCAAGAAGGAGACCGCTAC...GGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR TCA 72 bp | CGCTCTGCTCTCTCAGCTCCTGAAGGGCGTGCTCCTTaGAGAAACGGAGGGCATGGGCAAACACTTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RSALSAPEGRAP*RNGGHGQTLPE Trigger: CTCTGGAAGTGTTTGCCCATGCCCTCCGTTTCTTCAAGGAGCACGCCCTTCAGGAGCTGAGAGAGCAGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | ACTGCTCTGCTGCTACGAAGCGCTCAAAGACATCCGTaGACCAGCGGCGCCCATCCCGAACCAGCAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TALLLRSAQRHP*TSGAHPEPAIS Trigger: AGAAATTGCTGGTTCGGGATGGGCGCCGCTGGTGCACGGATGTCTTTGAGCGCTTCGTAGCAGCAGAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | TCCACGGCAGTGACCTTAATCTCAGTATCGCCAAACTaGATGGCAGCACGGATCTCACGGCGGCTGGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: STAVTLISVSPN*MAARISRRLGD Trigger: ATCCCCCAGCCGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGATACTGAGATTAAGGTCACTGCCGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGCAATTTCTCGGGTGGGTGGTGGCCAGGCACAAAACGATTGAGCACGCCCCCACTGACCGTGGGTaGAAACAGCTCATTCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: NQQFLGWVVARHKTIEHAPTDRG*KQLIHS Trigger: GCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGG...GGCGTGCTCAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR TCA 72 bp | AGGACCTTCGGAAGAGCAGTTGGTGCTCTTAACCGCTaGGCCATCTCTTCAGCCCCCTGTCCCATGATTATT | + |
|
Preference number: 3 (lower is better) Translates to: RTFGRAVGALNR*AISSAPCPMII Trigger: AATAATCATGGGACAGGGGGCTGAAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR TCA 72 bp | TTGAGCCACCACATCCCTTTCTGTGTTGCTGGGATCTaGACTCAGGACCTTCGGAAGAGCAGTTGGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSHHIPFCVAGI*TQDLRKSSWCS Trigger: AGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR GCA 72 bp | ACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTaGTGGGATCTGAACTCAGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDGFEPPHPFLC*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR CCA 72 bp | GATGGTTTTGAGCCACCACATCCCTTTCTGTGTTGCTaGGATCTGAACTCAGGACCTTCGGAAGAGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DGFEPPHPFLCC*DLNSGPSEEQL Trigger: CAACTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGGAATGGGCTTCCTGTGGCTaGAACTCAAAGTTAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LRISSQAGKAVLRHGWQEWASCG*NSKLAN Trigger: GTTGGCTAACTTTGAGTTCAAGCCACAGGAAGCCCA...TTCCTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGTTTCCTGTAGGTCCTTaGAGCATGCTGTGTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: HLRISSQAGKAVLRHGWQFPVGP*SMLCPH Trigger: ATGTGGACACAGCATGCTCAAAGGACCTACAGGAAA...CTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR TCA 72 bp | ATCTCTATGTGTTGGATGATCCCACTGACCGTGGGTTaGAACAGCTCATTCATAGCCTCACAGGACATCCGG | + |
|
Preference number: 3 (lower is better) Translates to: ISMCWMIPLTVG*NSSFIASQDIR Trigger: CCGGATGTCCTGTGAGGCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR GCA 72 bp | AAGGCAATGGTTAGATCCACCCAAGCTGCTGGCCGTTaGCTTTTGAATTTGGCAATGAAGTCCTCCCCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KAMVRSTQAAGR*LLNLAMKSSPN Trigger: ATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGATCTAACCATTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR TCA 72 bp | GTAACTCTGTCCTCCTGTGACTGGGTTGGGGGCAAATaGGTCATTTATAGCTTTCCTGTAGGTCCTTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VTLSSCDWVGGK*VIYSFPVGPLS Trigger: GCTCAAAGGACCTACAGGAAAGCTATAAATGACTCATTTGCCCCCAACCCAGTCACAGGAGGACAGAGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR GCA 72 bp | AGGTCCTTTGAGCATGCTGTGTCCACATCTCCAAACTaGTTTCACTGTGGCAGTGCAGCCACAATTAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSFEHAVSTSPN*FHCGSAATINS Trigger: ACTGTTAATTGTGGCTGCACTGCCACAGTGAAAGCAGTTTGGAGATGTGGACACAGCATGCTCAAAGGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CCA 72 bp | AGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTaGCAGGAAATGTCTGACATTTCACACTTGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSQAGKAVLRHG*QEMSDISHLEK Trigger: TTTCTCCAAGTGTGAAATGTCAGACATTTCCTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR GCA 72 bp | TATTATTCATACACTAATCCCACTTATGGAGGTCCCTaGTCTGGTAGTTCTAGAAGGCTGTTCTTTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: YYSYTNPTYGGP*SGSSRRLFFSL Trigger: TAAGGAAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR TCA 72 bp | GGCAGGAAATGTCTGACATTTCACACTTGGAGAAACTaGTTGGTCAGATTTCCTAATGGTATACTGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: GRKCLTFHTWRN*LVRFPNGILIC Trigger: ACATATCAGTATACCATTAGGAAATCTGACCAATCAGTTTCTCCAAGTGTGAAATGTCAGACATTTCCTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | TTGAGCGCCCCCGCACGGTGCGGGCCTGCCGTGCGTTaGCGGGCCTCGAAGGCAATGGTTAGATCCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPARCGPAVR*RASKAMVRSTQ Trigger: TTGGGTGGATCTAACCATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCCGCACCGTGCGGGGGCGCTCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACTGGGCTTCCTGCACCGCGTaGTGCAGCACCGCCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGNPRPLATVTLSSCDWASCTA*CSTADS Trigger: GGAGTCGGCGGTGCTGCAGCACGCGGTGCAGGAAGC...CCAGTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACTGGCAAGTGGGGGTCTTCTaGTGGGCCACGCCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGNPRPLATVTLSSCDWQVGVF*WATPGS Trigger: GGACCCAGGCGTGGCCCACCAGAAGACCCCCACTTG...CCAGTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACGCTCAAGCTCCAGGCTaGGTGCACCACACTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNPRPLATVTLSSCDAQAPG*VHHTCA Trigger: TGCGCAAGTGTGGTGCACTCAGCCTGGAGCTTGAGC...GTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACGGCTACTCAGGTCCATaGGCTGGTGCAGGCGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNPRPLATVTLSSCDGYSGP*AGAGEV Trigger: AACTTCGCCTGCACCAGCTCATGGACCTGAGTAGCC...GTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACTGGTCAGCAGCAGGCAAGTaGGGGTCTTCTGGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGNPRPLATVTLSSCDWSAAGK*GSSGGP Trigger: TGGCCCACCAGAAGACCCCCACTTGCCTGCTGCTGA...CCAGTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACAGGTCCATGAGCTGGTaGAGGCGAAGTTTCCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNPRPLATVTLSSCDRSMSW*RRSFRQ Trigger: CTGTCGGAAACTTCGCCTGCACCAGCTCATGGACCT...GTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCACAATTAACAGTCACACCTCCAGGAAGGTGCTACTCACACCTGTCCCTCTCCTGCACCGCGTGCTaGAGCACCGCCGACTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPQLTVTPPGRCYSHLSLSCTAC*STADSA Trigger: TGCGGAGTCGGCGGTGCTGCAGCACGCGGTGCAGGA...GAGGGACAGGTGTGAGTAGCACCTTCCTGGAGGTGTGACTGTTAATTGTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CACCCCCGTGGCTCCTCAGCAGCTTCACCTAACCTCAAGTTCAGGTCAGTGTTTGTGAGGCCCACGTCATaGGGGACCACAACGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRGSSAASPNLKFRSVFVRPTS*GTTTRR Trigger: CCTGCGCGTTGTGGTCCCGCATGACGTGGGCCTCAC...AAACACTGACCTGAACTTGAGGTTAGGTGAAGCTGCTGAGGAGCCACGGGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGCTGGAAACCCCCGCCCCCTTGCCACAGTAACTCTGTCCTCCTGTGACCAGCAATTTCTCGGGTaGGTGGTGGCCAGGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNPRPLATVTLSSCDQQFLG*VVARHK Trigger: TTTGTGCCTGGCCACCACCCACCCGAGAAATTGCTG...GTCACAGGAGGACAGAGTTACTGTGGCAAGGGGGCGGGGGTTTCCAGCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGGAACGCGCAGGCCACGAGTaGCCAGGGCTTCCTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LRISSQAGKAVLRHGWQERAGHE*PGLPAP Trigger: CGGTGCAGGAAGCCCTGGGCACTCGTGGCCTGCGCG...TTCCTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CACACCTGTCCCTCTAGCATGGGCCTAACACTCCCTTCCCTACTCCCCCTGCATAGTCCTCCCCGAATATaGGGCAGAGCAGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTCPSSMGLTLPSLLPLHSPPRI*GRAAAQ Trigger: TTGAGCAGCTGCTCTGCCGCATATTCGGGGAGGACT...ATGCAGGGGGAGTAGGGAAGGGAGTGTTAGGCCCATGCTAGAGGGACAGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CACCTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGGGCGGCTGGGGGATGTaGCTGTGTTTTCCGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLRISSQAGKAVLRHGWQGGWGM*LCFPGS Trigger: GCTGCCCGGAAAACACAGGCACATCCCCCAGCCGCC...CTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | CACCCCCGTGGCTCCTCAGCAGCTTCACCTAACCTCAAGTTCAGGTCAGTGTTTATACCACAGCTTTCCTaGGTCCTCGGGGAGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPRGSSAASPNLKFRSVFIPQLS*VLGEPG Trigger: TCCCGGCTCCCCGAGGACCCAGGAAAGCTGTGGTAT...AAACACTGACCTGAACTTGAGGTTAGGTGAAGCTGCTGAGGAGCCACGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | CACGAGGTTCACACTGCTCCTGCGCAGGGCGGTCTCCACATTGTGCCCTCGTTGCATAGCCACTGGATGTaGTTCCAAAGTCGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HEVHTAPAQGGLHIVPSLHSHWM*FQSRWP Trigger: TGGCCATCGACTTTGGAACCACATCCAGTGGCTATG...CAACGAGGGCACAATGTGGAGACCGCCCTGCGCAGGAGCAGTGTGAACCTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| 3UTR CAA 72 bp | CACACTGCGGCACCTGTACGAGGACACGGATGCCTTTaGGGTCTTGGGACTAGTTGCTTGAGTGGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTAAPVRGHGCL*GLGTSCLSGEV Trigger: CACCTCCCCACTCAAGCAACTAGTCCCAAGACCCAAAAGGCATCCGTGTCCTCGTACAGGTGCCGCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR TCA 90 bp | CACCTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGTCCTTGAGGGTCCCGTaGGGCTGCTCCAACTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLRISSQAGKAVLRHGWQSLRVP*GCSNWC Trigger: ACACCAGTTGGAGCAGCCTCACGGGACCCTCAAGGA...CTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTTCTTTTCCGTCAGGTCCACAGTaGCACCCCCGCAGTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIPLMEVPALVVLEGCSFPSGPQ*HPRSRP Trigger: TGGCCGACTGCGGGGGTGGCACTGTGGACCTGACGG...AAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CACCCCCGTGGCTCCTCAGCAGCTTCACCTAACCTCAAGTTCAGGTCAGTGTTTCACCGACTGCTCTGCTaGTACGAAGCGCTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPRGSSAASPNLKFRSVFHRLLC*YEALKD Trigger: GTCTTTGAGCGCTTCGTAGCAGCAGAGCAGTCGGTG...AAACACTGACCTGAACTTGAGGTTAGGTGAAGCTGCTGAGGAGCCACGGGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | TGCTGGGATCTGAACTCAGGACCTTCGGAAGAGCAGTaGGTGCTCTTAACCGCTGAGCCATCTCTTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSGPSEEQ*VLLTAEPSLQP Trigger: GGGCTGAAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR CAA 72 bp | GCTCCTGCGCAGGGCGGTCTCCACATTGTGCCCTCGTaGCTTGCGGTAGAAGTCAATGAAAGAGAAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: APAQGGLHIVPS*LAVEVNERERK Trigger: CTTCCTTTCTCTTTCATTGACTTCTACCGCAAGCAACGAGGGCACAATGTGGAGACCGCCCTGCGCAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| CDS-3UTR GCA 90 bp | CTGACAACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCCAGGCGCCCACGGCCTaGAGTCCGGCTACTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTTVFYYSYTNPTYGGPCQAPTA*SPATQV Trigger: GACCTGAGTAGCCGGACTGCAGGCCGTGGGCGCCTG...GCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGTTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR GCA 90 bp | CATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTCCTAGGGCCACCGACTaGTCTGCTGCTACGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HTLIPLMEVPALVVLEGCPRATD*SAATKR Trigger: GCGCTTCGTAGCAGCAGAGCAGTCGGTGGCCCTAGG...ACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | CAGCCACAATTAACAGTCACACCTCCAGGAAGGTGCTACTCACACCTGTCCCTCTTCTCGGGTGGGTGGTaGCCAGGCACAAAACGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QPQLTVTPPGRCYSHLSLFSGGW*PGTKRL Trigger: CAATCGTTTTGTGCCTGGCCACCACCCACCCGAGAA...GAGGGACAGGTGTGAGTAGCACCTTCCTGGAGGTGTGACTGTTAATTGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | AGATCCACCCAAGCTGCTGGCCGTTGCCTTTTGAATTaGGCAATGAAGTCCTCCCCGAATATGCGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQAAGRCLLN*AMKSSPNMRQS Trigger: GCTCTGCCGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| 3UTR CAA 72 bp | CTGCACCTCAGGCTTAGCCAGCAGCATCTCTATGTGTaGGATGATCCCACTGACCGTGGGTTGAAACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLRLSQQHLYV*DDPTDRGLKQL Trigger: GAGCTGTTTCAACCCACGGTCAGTGGGATCATCCAACACATAGAGATGCTGCTGGCTAAGCCTGAGGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| CDS-3UTR TCA 90 bp | GTTACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTGCTGGGATCTGAACGAGACTGTGAAGGCGTaGGGGGAGCGATACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTDGFEPPHPFLCCWDLNETVKA*GERYHS Trigger: GCTGTGGTATCGCTCCCCTCACGCCTTCACAGTCTC...GTTCAGATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| CDS-3UTR CCA 90 bp | GCCTCAGATCTTGTTACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTGCATACCACAGCTTTCCTaGGTCCTCGGGGAGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASDLVTDGFEPPHPFLCCIPQLS*VLGEPG Trigger: TCCCGGCTCCCCGAGGACCCAGGAAAGCTGTGGTAT...GCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATCTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| CDS-3UTR CCA 90 bp | CACCCCCGTGGCTCCTCAGCAGCTTCACCTAACCTCAAGTTCAGGTCAGTGTTTCATAGCCACTGGATGTaGTTCCAAAGTCGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRGSSAASPNLKFRSVFHSHWM*FQSRWP Trigger: TGGCCATCGACTTTGGAACCACATCCAGTGGCTATG...AAACACTGACCTGAACTTGAGGTTAGGTGAAGCTGCTGAGGAGCCACGGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| 3UTR CAA 72 bp | TTGGAAAGAAAGTCGATGGCTGCCCGCACAGAGCGATaGGTGCTGACATCCACGGCAGTGACCTTAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LERKSMAARTER*VLTSTAVTLIS Trigger: TGAGATTAAGGTCACTGCCGTGGATGTCAGCACCAATCGCTCTGTGCGGGCAGCCATCGACTTTCTTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| CDS-3UTR TCA 90 bp | CACCTAACCTCAAGTTCAGGTCAGTGTTTAGTCCTCTGTTGCAGTCTATCTTCGCCTTGTAGAGCTCCTTaGGGGTCCCGTGAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLTSSSGQCLVLCCSLSSPCRAP*GSREAA Trigger: AGCAGCCTCACGGGACCCTCAAGGAGCTCTACAAGG...CGAAGATAGACTGCAACAGAGGACTAAACACTGACCTGAACTTGAGGTTAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR TCA 90 bp | CACACCTGTCCCTCTAGCATGGGCCTAACACTCCCTTCCCTACTCCCCCTGCATTGCGGTAGAAGTCAATaGAAGAGAAAGGAAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTCPSSMGLTLPSLLPLHCGRSQ*KRKEAK Trigger: TTTCGCTTCCTTTCTCTTTCATTGACTTCTACCGCA...ATGCAGGGGGAGTAGGGAAGGGAGTGTTAGGCCCATGCTAGAGGGACAGGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | CTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGGAATCCTTCTTGCATCTCTaGCCACAGCTCTCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LRISSQAGKAVLRHGWQESFLHL*PQLSHT Trigger: GGTGTGGGAGAGCTGTGGGCAGAGATGCAAGAAGGA...TTCCTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | AGTGACCTTAATCTCAGTATCGCCAAACTGCATGGCAGCACGGATCTCACGGCGTGGTTCCAAAGTCGATaGCCACAACCACAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLNLSIAKLHGSTDLTAWFQSR*PQPQRR Trigger: CCTTCTCTGTGGTTGTGGCCATCGACTTTGGAACCA...CGCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGATACTGAGATTAAGGTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGGATCTGAACTCAGGACCTTCGGAAGAGCAGTTGGTGCTCTTAACCGCTCATAGCCACTGGATGTaGTTCCAAAGTCGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSGPSEEQLVLLTAHSHWM*FQSRWP Trigger: TGGCCATCGACTTTGGAACCACATCCAGTGGCTATG...AGCGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAGATCCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| CDS-3UTR CCA 90 bp | CAGCCACAATTAACAGTCACACCTCCAGGAAGGTGCTACTCACACCTGTCCCTCTTTACCGCCTCGAGCTaGGTCTTCAAGGTGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QPQLTVTPPGRCYSHLSLFTASS*VFKVRS Trigger: TGATCTCACCTTGAAGACCCAGCTCGAGGCGGTAAA...GAGGGACAGGTGTGAGTAGCACCTTCCTGGAGGTGTGACTGTTAATTGTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | CACCCCCGTGGCTCCTCAGCAGCTTCACCTAACCTCAAGTTCAGGTCAGTGTTTATCCACCCAAGCTGCTaGCCGTTGCCTTTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HPRGSSAASPNLKFRSVFIHPSC*PLPFEF Trigger: AAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGAT...AAACACTGACCTGAACTTGAGGTTAGGTGAAGCTGCTGAGGAGCCACGGGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | CTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGGAAGGGCCTCGAAGGCAATaGTTAGATCCACCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRISSQAGKAVLRHGWQEGPRRQ*LDPPKL Trigger: CAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCC...TTCCTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | ATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAACTGGTGGGCCACGCCTaGGTCCCCTCCCTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IIHTLIPLMEVPALVVLELVGHA*VPSLPF Trigger: AAATGGGAGGGAGGGGACCCAGGCGTGGCCCACCAG...TTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | CTCCCTTCCCTACTCCCCCTGCATGAGATTACTCTCTaGGGCTTCCTGTGGCTTGAACTCAAAGTTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLPLHEITL*GFLWLELKVSQ Trigger: TTGGCTAACTTTGAGTTCAAGCCACAGGAAGCCCAAGAGAGTAATCTCATGCAGGGGGAGTAGGGAAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | ATGGTTAGATCCACCCAAGCTGCTGGCCGTTGCCTTTaGAATTTGGCAATGAAGTCCTCCCCGAATATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MVRSTQAAGRCL*NLAMKSSPNMR Trigger: CCGCATATTCGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGCAGCTTGGGTGGATCTAACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
||
| CDS-3UTR TCA 90 bp | CTGACAACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTGCTCTCTCAGCTCCTaGAGGGCGTGCTCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTTVFYYSYTNPTYGGPCCSLSS*RACSLK Trigger: CTTCAAGGAGCACGCCCTTCAGGAGCTGAGAGAGCA...GCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGTTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | CACCTAACCTCAAGTTCAGGTCAGTGTTTAGTCCTCTGTTGCAGTCTATCTTCGCCGGTTGTTTCCAGATaGCAGGTACTGTCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HLTSSSGQCLVLCCSLSSPVVSR*QVLSAP Trigger: GGGTGCTGACAGTACCTGCCATCTGGAAACAACCGG...CGAAGATAGACTGCAACAGAGGACTAAACACTGACCTGAACTTGAGGTTAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | CTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTTCTTTTTATCGCCAAACTGCATaGCAGCACGGATCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPLMEVPALVVLEGCSFYRQTA*QHGSHG Trigger: GCCGTGAGATCCGTGCTGCCATGCAGTTTGGCGATA...AAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | ACCAGAAGAGGGCCTCAGATCTTGTTACAGATGGTTTaGAGCCACCACATCCCTTTCTGTGTTGCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TRRGPQILLQMV*SHHIPFCVAGI Trigger: GATCCCAGCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATCTGAGGCCCTCTTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| 3UTR CAA 72 bp | CCTAACCTCAAGTTCAGGTCAGTGTTTAGTCCTCTGTaGCAGTCTATCTTCGTGGTCACACACTCGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNLKFRSVFSPL*QSIFVVTHSPS Trigger: GCTTGGCGAGTGTGTGACCACGAAGATAGACTGCAACAGAGGACTAAACACTGACCTGAACTTGAGGTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR TCA 90 bp | ATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGAGACTGTGAAGGCGTaGGGGGAGCGATACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIHTLIPLMEVPALVVLEETVKA*GERYHS Trigger: GCTGTGGTATCGCTCCCCTCACGCCTTCACAGTCTC...TTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR TCA 90 bp | TTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTGAAGGGCGTGCTCCTTaGAGAAACGGAGGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYYSYTNPTYGGPCSGSSEGRAP*RNGGHG Trigger: CCCATGCCCTCCGTTTCTTCAAGGAGCACGCCCTTC...AGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGATCTTGTTACAGATGGTTTTGAGCCACCACATCCCTTTCTGTGTTGCTGGTTCCAAAGTCGATaGCCACAACCACAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASDLVTDGFEPPHPFLCCWFQSR*PQPQRR Trigger: CCTTCTCTGTGGTTGTGGCCATCGACTTTGGAACCA...GCAACACAGAAAGGGATGTGGTGGCTCAAAACCATCTGTAACAAGATCTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
||
| CDS-3UTR CCA 90 bp | CTGACAACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCCTCAGGTCCATGAGCTaGTGCAGGCGAAGTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTTVFYYSYTNPTYGGPCLRSMS*CRRSFR Trigger: TCGGAAACTTCGCCTGCACCAGCTCATGGACCTGAG...GCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGTTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | CCCTGCATGAGATTACTCTCTTGGGCTTCCTGTGGCTaGAACTCAAAGTTAGCCAACTCTAACCTTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCMRLLSWASCG*NSKLANSNLQS Trigger: GGACTGAAGGTTAGAGTTGGCTAACTTTGAGTTCAAGCCACAGGAAGCCCAAGAGAGTAATCTCATGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| 3UTR CAA 72 bp | GACAGGAGGAGAGCGACAACTCCTTGCCATGTCCCTTaGATCTGTGTAGCTGACAACCGTCTTCTATTATTC | + |
|
Preference number: 4 (lower is better) Translates to: DRRRATTPCHVP*ICVADNRLLLF Trigger: GAATAATAGAAGACGGTTGTCAGCTACACAGATCAAAGGGACATGGCAAGGAGTTGTCGCTCTCCTCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
||
| CDS-3UTR TCA 90 bp | CTGACAACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCGCTGGGTCTTCAAGGTaGGATCAGTGGCACTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LTTVFYYSYTNPTYGGPCAGSSR*DQWHCE Trigger: TTCACAGTGCCACTGATCTCACCTTGAAGACCCAGC...GCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGTTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | TTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTGGCCACCGACTGCTCTaGTGCTACGAAGCGCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: FYYSYTNPTYGGPCSGSSGHRLL*CYEALK Trigger: TTTGAGCGCTTCGTAGCAGCAGAGCAGTCGGTGGCC...AGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | TATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAGCGCAGGACAGTAGCTaGGCCTTACCTCCTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: YYSYTNPTYGGPCSGSSRAQDSS*ALPPLL Trigger: TAGGAGAGGAGGTAAGGCGCAGCTACTGTCCTGCGC...TCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | TTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAAGCTCCAGGCTGAGTaGACCACACTTGCGCACACC | + |
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Preference number: 4 (lower is better) Translates to: FYYSYTNPTYGGPCSGSSKLQAE*TTLAHT Trigger: GGTGTGCGCAAGTGTGGTGCACTCAGCCTGGAGCTT...AGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | CTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTTCTTTTTGGTTCCAAAGTCGATaGCCACAACCACAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LIPLMEVPALVVLEGCSFWFQSR*PQPQRR Trigger: CCTTCTCTGTGGTTGTGGCCATCGACTTTGGAACCA...AAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | CTGACAACCGTCTTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCGTGAAAGATGCCTTCTaGGGTCAGCAGCAGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LTTVFYYSYTNPTYGGPCVKDAF*GQQQAS Trigger: ACTTGCCTGCTGCTGACCCCAGAAGGCATCTTTCAC...GCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAAGACGGTTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | CTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTTCTTTTAGCATCTCTATGTGTTaGATGATCCCACTGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: LIPLMEVPALVVLEGCSFSISMC*MIPLTV Trigger: CACGGTCAGTGGGATCATCCAACACATAGAGATGCT...AAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | ATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAAAGAAAGTCGATGGCTaGCCGCACAGAGCGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: IIHTLIPLMEVPALVVLEKKVDG*PHRAIG Trigger: ACCAATCGCTCTGTGCGGGCAGCCATCGACTTTCTT...TTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CCA 90 bp | TTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTTGGAAAGAAAGTCGATaGCTGCCCGCACAGAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: FYYSYTNPTYGGPCSGSSWKESR*LPAQSD Trigger: ATCGCTCTGTGCGGGCAGCCATCGACTTTCTTTCCA...AGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR TCA 90 bp | ATTATTATATCTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCCTCCATACCTCATCATGTaGATGGCCTCAGGGTCACTA | + |
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Preference number: 4 (lower is better) Translates to: IIISKYTVAVFRHTRRGPPYLIM*MASGSL Trigger: TAGTGACCCTGAGGCCATTCACATGATGAGGTATGG...AGGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTAGATATAATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100763.9 |
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| CDS-3UTR TCA 90 bp | TATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGACATTTCCTCATCATGTaGATGGCCTCAGGGTCACTA | + |
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Preference number: 4 (lower is better) Translates to: YYSYTNPTYGGPCSGSSRHFLIM*MASGSL Trigger: TAGTGACCCTGAGGCCATTCACATGATGAGGAAATG...TCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | TTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTCAAAACTGTGAAAGATaGCTTCTGGGGTCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FYYSYTNPTYGGPCSGSSQNCER*LLGSAA Trigger: TGCTGCTGACCCCAGAAGGCATCTTTCACAGTTTTG...AGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR GCA 90 bp | ATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAAATGAGGAGTTTCTCTaGATCCTCTCGAGACACCAA | + |
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Preference number: 4 (lower is better) Translates to: IIHTLIPLMEVPALVVLENEEFL*ILSRHQ Trigger: TTGGTGTCTCGAGAGGATGCAGAGAAACTCCTCATT...TTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS TCA 90 bp | CCTGCTGTAGAGCTCGGGCCTCTGGCTTTGGAGACTGTGAAGGCGTaGGGGGAGCGATACCACAGCTTTCCTGGGTCCTCGGGGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: PAVELGPLALETVKA*GERYHSFPGSSGSR Trigger: CCGGCTCCCCGAGGACCCAGGAAAGCTGTGGTATCGCTCCCCTCACGCCTTCACAGTCTCCAAAGCCAGAGGCCCGAGCTCTACAGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099349.10 ENSMUST00000100763.9 |
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| CDS-3UTR CAA 90 bp | GTGCGTTTGCGGGCCTCGAAGGCAATGGTTAGATCCACCCAAGCTGCTGGCCGTCTCGGGCCTCTGGCTTaGATATACAGCCCTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VRLRASKAMVRSTQAAGRLGPLA*IYSPCR Trigger: CCTGCAAGGGCTGTATATCAAAGCCAGAGGCCCGAG...ACGGCCAGCAGCTTGGGTGGATCTAACCATTGCCTTCGAGGCCCGCAAACGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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| CDS-3UTR CAA 90 bp | CACCTTAGGATAAGTTCTCAGGCAGGGAAAGCTGTCTTACGCCATGGTTGGCAGAGGGCGGTCTCCACATaGTGCCCTCGTTGCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: HLRISSQAGKAVLRHGWQRAVST*CPRCLR Trigger: CCGCAAGCAACGAGGGCACAATGTGGAGACCGCCCT...CTGCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | CACACCTGTCCCTCTAGCATGGGCCTAACACTCCCTTCCCTACTCCCCCTGCATCCCACTGACCGTGGGTaGAAACAGCTCATTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: HTCPSSMGLTLPSLLPLHPTDRG*KQLIHS Trigger: GCTATGAATGAGCTGTTTCAACCCACGGTCAGTGGG...ATGCAGGGGGAGTAGGGAAGGGAGTGTTAGGCCCATGCTAGAGGGACAGGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | CACCTAACCTCAAGTTCAGGTCAGTGTTTAGTCCTCTGTTGCAGTCTATCTTCGGGGCCTGCCGTGCGTTaGCGGGCCTCGAAGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: HLTSSSGQCLVLCCSLSSGPAVR*RASKAM Trigger: CATTGCCTTCGAGGCCCGCAAACGCACGGCAGGCCC...CGAAGATAGACTGCAACAGAGGACTAAACACTGACCTGAACTTGAGGTTAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | CTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTTCTTTTGCGCAGCAGTACAGATaGATGAGCACACGCCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LIPLMEVPALVVLEGCSFAQQYR*MSTRRW Trigger: CCAGCGGCGTGTGCTCATCAATCTGTACTGCTGCGC...AAAAGAACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | CATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGGCTGTCGTTGCCTTTTGAATTaGGCAATGAAGTCCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: HTLIPLMEVPALVVLEGCRCLLN*AMKSSP Trigger: CGGGGAGGACTTCATTGCCAAATTCAAAAGGCAACG...ACAGCCTTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | TTCTATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTGTAGCGGTCTCCTTCTaGCATCTCTGCCCACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: FYYSYTNPTYGGPCSGSSVAVSF*HLCPQL Trigger: GAGCTGTGGGCAGAGATGCAAGAAGGAGACCGCTAC...AGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | CACCTAACCTCAAGTTCAGGTCAGTGTTTAGTCCTCTGTTGCAGTCTATCTTCGCACATTGTGCCCTCGTaGCTTGCGGTAGAAGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: HLTSSSGQCLVLCCSLSSHIVPS*LAVEVN Trigger: ATTGACTTCTACCGCAAGCAACGAGGGCACAATGTG...CGAAGATAGACTGCAACAGAGGACTAAACACTGACCTGAACTTGAGGTTAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS-3UTR CAA 90 bp | ATTATTCATACACTAATCCCACTTATGGAGGTCCCTGCTCTGGTAGTTCTAGAAGCTGGCCGTTGCCTTTaGAATTTGGCAATGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: IIHTLIPLMEVPALVVLEAGRCL*NLAMKS Trigger: GGACTTCATTGCCAAATTCAAAAGGCAACGGCCAGC...TTCTAGAACTACCAGAGCAGGGACCTCCATAAGTGGGATTAGTGTATGAATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099349.10 |
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| CDS CCA 72 bp | TGTGAAGGCGTGAGGGGAGCGATACCACAGCTTTCCTaGGTCCTCGGGGAGCCGGGAGGGCTGGGCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: CEGVRGAIPQLS*VLGEPGGLGTG Trigger: CCCGGTGCCCAGCCCTCCCGGCTCCCCGAGGACCCAGGAAAGCTGTGGTATCGCTCCCCTCACGCCTTCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099349.10 ENSMUST00000100763.9 |
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| CDS TCA 72 bp | GAGCTCGGGCCTCTGGCTTTGGAGACTGTGAAGGCGTaGGGGGAGCGATACCACAGCTTTCCTGGGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ELGPLALETVKA*GERYHSFPGSS Trigger: CGAGGACCCAGGAAAGCTGTGGTATCGCTCCCCTCACGCCTTCACAGTCTCCAAAGCCAGAGGCCCGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099349.10 ENSMUST00000100763.9 |
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| CDS CAA 72 bp | AGAAGGAAGCCTGCTGTAGAGCTCGGGCCTCTGGCTTaGATATACAGCCCTTGCAGGCCCATTTCCGGGACA | + |
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Preference number: 6 (lower is better) Translates to: RRKPAVELGPLA*IYSPCRPISGT Trigger: TGTCCCGGAAATGGGCCTGCAAGGGCTGTATATCAAAGCCAGAGGCCCGAGCTCTACAGCAGGCTTCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127862.2 |
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