Pregenerated sensors for HSPA12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025092Ensembl transcript IDs: ENSMUST00000066285.6, ENSMUST00000235263.2, ENSMUST00000237297.2, ENSMUST00000238055.2
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGGGCAGTGGCGAGGGTCAGGATCAGGGACAGAACAGTCAGGCTaGGGTCAGCAAATGCAGATGAGTCCCAGGGGGCTGGTGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GGQWRGSGSGTEQSG*GQQMQMSPRGLVAR Trigger: CCTGGCCACCAGCCCCCTGGGACTCATCTGCATTTGCTGACCTCAGCCTGACTGTTCTGTCCCTGATCCTGACCCTCGCCACTGCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | TGCAGACCCAGAGTCTGGAAGGGATTAGGTTCAGGACCCTGCTCCTaGCAAGCACCAGCGATTCTGAGGCTGGAGAGCCACAGGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: CRPRVWKGLGSGPCS*QAPAILRLESHRPA Trigger: GGCAGGCCTGTGGCTCTCCAGCCTCAGAATCGCTGGTGCTTGTCAGGAGCAGGGTCCTGAACCTAATCCCTTCCAGACTCTGGGTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | GGGTTAGCAGGAGTCCTAGAAAGCAGGCATCCTGAGGTCTGGATTTaGGACCCTGCCGTCCAGTTTGGGGTTCCCATTCGCTTGTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: GLAGVLESRHPEVWI*DPAVQFGVPIRLFC Trigger: ACAGAACAAGCGAATGGGAACCCCAAACTGGACGGCAGGGTCTCAAATCCAGACCTCAGGATGCCTGCTTTCTAGGACTCCTGCTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | ATTTATTTTGGCCCCAGGTTTGGGAGTACAGTCTGGTCACGGTCATaGAGGGAAAGGCATGGTAGCGGGAACCTGAGGCAGAGGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: IYFGPRFGSTVWSRS*RERHGSGNLRQRLT Trigger: TGTGAGCCTCTGCCTCAGGTTCCCGCTACCATGCCTTTCCCTCCATGACCGTGACCAGACTGTACTCCCAAACCTGGGGCCAAAATAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| 3UTR TCA 90 bp | CGCATGCATCGTCCACTGTGGGGTAACAGCACAGACAGCAACCAGTaGGGACAGTTAAGAAATGAAGCTGTGGAGCTTACAGGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RMHRPLWGNSTDSNQ*GQLRNEAVELTGSS Trigger: GCTGCTGCCTGTAAGCTCCACAGCTTCATTTCTTAACTGTCCTCACTGGTTGCTGTCTGTGCTGTTACCCCACAGTGGACGATGCATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR GCA 90 bp | CTCACTAAGGGCTGTTTGACCACCCAGGAACCCGTGAAGGCTGGCTaGTCTGGGGATCCTCAAACTTCCTATTTCCACGTCGTGATATTG | + |
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Preference number: 1 (lower is better) Translates to: LTKGCLTTQEPVKAG*SGDPQTSYFHVVIL Trigger: CAATATCACGACGTGGAAATAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCCTGGGTGGTCAAACAGCCCTTAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR GCA 90 bp | GGTCACTTCAGCTTGGAGGGAATTCTCACATTCCAACACTACGACTaGAGACCCAGAGTCTGGAAGGGATTAGGTTCAGGACCCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: GHFSLEGILTFQHYD*RPRVWKGLGSGPCS Trigger: GGAGCAGGGTCCTGAACCTAATCCCTTCCAGACTCTGGGTCTGCAGTCGTAGTGTTGGAATGTGAGAATTCCCTCCAAGCTGAAGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR GCA 90 bp | GAGTATTCTGACCCAAGGCACCTCTGTCTATTGCTCAGTCTCGCATaGATCGTCCACTGTGGGGTAACAGCACAGACAGCAACCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: EYSDPRHLCLLLSLA*IVHCGVTAQTATSE Trigger: CTCACTGGTTGCTGTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAGAGGTGCCTTGGGTCAGAATACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | TCCTTAGTTCATCTTCACTCTGGTTCATGCCTACTGAAATTCAGGTaGGCAGTGGCGAGGGTCAGGATCAGGGACAGAACAGTCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLVHLHSGSCLLKFR*AVARVRIRDRTVRL Trigger: CAGCCTGACTGTTCTGTCCCTGATCCTGACCCTCGCCACTGCCCACCTGAATTTCAGTAGGCATGAACCAGAGTGAAGATGAACTAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | AATGTTGGCAAGTCTAGCCTTGCACAGGAGGAGGAACACAGAACCTaGCCTTGGGAGGCTTCTTTTTCGTGGTTCCTCTCCTGCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: NVGKSSLAQEEEHRT*PWEASFSWFLSCCL Trigger: AAGACAGCAGGAGAGGAACCACGAAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAGACTTGCCAACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | TGCTCCGGTGAACCCTCAAAAAGAATCCTTAGTTCATCTTCACTCTaGTTCATGCCTACTGAAATTCAGGTGGGCAGTGGCGAGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: CSGEPSKRILSSSSL*FMPTEIQVGSGEGQ Trigger: CTGACCCTCGCCACTGCCCACCTGAATTTCAGTAGGCATGAACCAGAGTGAAGATGAACTAAGGATTCTTTTTGAGGGTTCACCGGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | GAGGGAAATCTGACAGGGATTGTTAAGGCCACACACTGTGGTCTGTaGTCACTTCAGCTTGGAGGGAATTCTCACATTCCAACACTACGA | + |
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Preference number: 1 (lower is better) Translates to: EGNLTGIVKATHCGL*SLQLGGNSHIPTLR Trigger: TCGTAGTGTTGGAATGTGAGAATTCCCTCCAAGCTGAAGTGACCACAGACCACAGTGTGTGGCCTTAACAATCCCTGTCAGATTTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | AACAAAATCGAAAGTCTATTTGAGGACTGTGGCTGGAAACACCCATaGGCTTCTGAAGCAGGGTTAGCAGGAGTCCTAGAAAGCAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: NKIESLFEDCGWKHP*ASEAGLAGVLESRH Trigger: ATGCCTGCTTTCTAGGACTCCTGCTAACCCTGCTTCAGAAGCTCATGGGTGTTTCCAGCCACAGTCCTCAAATAGACTTTCGATTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR GCA 90 bp | TTCCAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTaGTACATTACTCTTTATGCAGACCGTTCAGCTTTGGGTAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: FQNQYVQLSKSRREN*YITLYADRSALGRG Trigger: ACCCCTACCCAAAGCTGAACGGTCTGCATAAAGAGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | CAGATAACCTATGCAAAGGACAATCGGTCAAGACCACAGACCTTCTaGAACTTTCTAAGACTGGGGAATGTGTTCCAGGTGTACTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: QITYAKDNRSRPQTF*NFLRLGNVFQVYSS Trigger: GGAAGAGTACACCTGGAACACATTCCCCAGTCTTAGAAAGTTCCAGAAGGTCTGTGGTCTTGACCGATTGTCCTTTGCATAGGTTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | TCTGCATTTACGAATGCCTGCTGTGTCCTGGAAAGGTTAGTTAAGTaGCCAGATAACCTATGCAAAGGACAATCGGTCAAGACCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: SAFTNACCVLERLVK*PDNLCKGQSVKTTD Trigger: GTCTGTGGTCTTGACCGATTGTCCTTTGCATAGGTTATCTGGTCACTTAACTAACCTTTCCAGGACACAGCAGGCATTCGTAAATGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | TTGCAGACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTaGCGTTTGGATCTATCTTGTAGTGAACAAGCCTCCCAGTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LQTQCCLVVNCCRIL*RLDLSCSEQASQWL Trigger: CAACCACTGGGAGGCTTGTTCACTACAAGATAGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | GGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCTCTaGGTCCAAAGGAAGTCCAGTGAAATCACACCCTTTCCCCATCAT | + |
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Preference number: 1 (lower is better) Translates to: GDLYTKRVWLLGLHL*VQRKSSEITPFPHH Trigger: ATGATGGGGAAAGGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | AGGACTATGAGTCAGATTCTTGATTCTTTACCCTCATTTGGCTCTTaGATGTTGAATGTTGGCAAGTCTAGCCTTGCACAGGAGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: RTMSQILDSLPSFGS*MLNVGKSSLAQEEE Trigger: TTCCTCCTCCTGTGCAAGGCTAGACTTGCCAACATTCAACATTCAAGAGCCAAATGAGGGTAAAGAATCAAGAATCTGACTCATAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CCA 90 bp | TATGGCCAGAAATTTCCTCACAGACATGCCTTAATGTTTGTCTCCTaGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGTATCAACCAT | + |
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Preference number: 1 (lower is better) Translates to: YGQKFPHRHALMFVS*KIPDLVKLAISINH Trigger: ATGGTTGATACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAAGGCATGTCTGTGAGGAAATTTCTGGCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| 3UTR CCA 90 bp | TATTGGTGCATGCAATTCTTTGCTACCCTGGCAATTAACCAGACCTaGACTCTAAAAGCTAAACTTGGTCTAAGTAACATTCTAAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: YWCMQFFATLAINQT*TLKAKLGLSNILRA Trigger: CGCCCTTAGAATGTTACTTAGACCAAGTTTAGCTTTTAGAGTCCAGGTCTGGTTAATTGCCAGGGTAGCAAAGAATTGCATGCACCAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR GCA 90 bp | AATGAAGCTGTGGAGCTTACAGGCAGCAGCGTTATTAACCAAAATTaGGAGTATTTTCCCTTTCAAACAAGCACAAGTAGAAATAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: NEAVELTGSSVINQN*EYFPFQTSTSRNKD Trigger: ATCTTTATTTCTACTTGTGCTTGTTTGAAAGGGAAAATACTCGCAATTTTGGTTAATAACGCTGCTGCCTGTAAGCTCCACAGCTTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR TCA 90 bp | ATACGTACTGCGCAGCCTAATCACAACTATTACGTCACTACAATGTaGAGTTCATCTTCGATTAATAATGCATTTTTGACTCCTGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: IRTAQPNHNYYVTTM*SSSSINNAFLTPVY Trigger: ATAAACAGGAGTCAAAAATGCATTATTAATCGAAGATGAACTTCACATTGTAGTGACGTAATAGTTGTGATTAGGCTGCGCAGTACGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | GATTCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACGGAACCCGTGAAGGCTaGCTGCTCTGGGGATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: DSEAGEPQACLHGSRFTYGTREG*LLWGSS Trigger: TGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCC...GTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | CACACTGCACCGCCAGGAAGCAGGAAGAATGAATGTTGGTGCCTGGCTCCCTTTCCATCAGAGAGGCTGTaGACATCTACGGCATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HTAPPGSRKNECWCLAPFPSERL*TSTAWV Trigger: CACCCATGCCGTAGATGTTCACAGCCTCTCTGATGG...AAAGGGAGCCAGGCACCAACATTCATTCTTCCTGCTTCCTGGCGGTGCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGGGAATTCTCACATTCCAACACTACGACTGCAGACCCAGAGTCTGGAAGTCCCAGGGGGCTGGTaGCCAGGAGGGACAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: LGGNSHIPTLRLQTQSLEVPGGW*PGGTVT Trigger: TGTAACTGTCCCTCCTGGCCACCAGCCCCCTGGGAC...TTCCAGACTCTGGGTCTGCAGTCGTAGTGTTGGAATGTGAGAATTCCCTCCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTCCACCCAGGAACCCGTaGAGGCTGGCTGCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QNQYVQLSKSRRENCYITPPRNP*RLAALG Trigger: CCCCAGAGCAGCCAGCCTTCACGGGTTCCTGGGTGG...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGGGAATTCTCACATTCCAACACTACGACTGCAGACCCAGAGTCTGGAAAAGCACCAGCGATTCTaGGGCTGGAGAGCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGGNSHIPTLRLQTQSLEKHQRF*GWRATG Trigger: GCCTGTGGCTCTCCAGCCTCAGAATCGCTGGTGCTT...TTCCAGACTCTGGGTCTGCAGTCGTAGTGTTGGAATGTGAGAATTCCCTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | CACCGCCAGGAAGCAGGAAGAATGAATGTTGGTGCCTGGCTCCCTTTCTCCAGCCATCTACGGCATGGGTaGACTCTTGATAGCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: HRQEAGRMNVGAWLPFSSHLRHG*TLDSWS Trigger: TGACCAGCTATCAAGAGTTCACCCATGCCGTAGATG...GCTGGAGAAAGGGAGCCAGGCACCAACATTCATTCTTCCTGCTTCCTGGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTATTGCTCAGTCTCGCATGCATCGTCCACTGTGGGGTAACAGCACAGACCCCTGCCGTCCAGTTTaGGGTTCCCATTCGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LSIAQSRMHRPLWGNSTDPCRPV*GSHSLV Trigger: AACAAGCGAATGGGAACCCCAAACTGGACGGCAGGG...GTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAACCCGTGAAGGCTGGCTGCTCTGGGGATCCTCAAACTTCCTATTTCCAACAGAACAGTCAGGCTaGGGTCAGCAAATGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: PGTREGWLLWGSSNFLFPTEQSG*GQQMQM Trigger: CATCTGCATTTGCTGACCTCAGCCTGACTGTTCTGT...TGGAAATAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCAACAGCCTCCGAGGGCAGGTGGACCTCCAACCCTCTTACCTAGAGAGCAAGGAAAGGGTTAACTaGAAATGTGCATGGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KGNSLRGQVDLQPSYLESKERVN*KCAWLA Trigger: TGCCAACCATGCACATTTTCAGTTAACCCTTTCCTT...GCTCTCTAGGTAAGAGGGTTGGAGGTCCACCTGCCCTCGGAGGCTGTTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCGAAGGCTGGCTGCTCTaGGGATCCTCAAACTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: WLLGLHLWVQRKSSEITPEGWLL*GSSNFL Trigger: TAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTC...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CAA 90 bp | CCAGAGGCAGGTGGCCACTGTCAGCCTCCTGGCCAAGCTGAATCCTaGCCTCTACTCCCTTCTTATATAAATGTTCTTGCTTCCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PEAGGHCQPPGQAES*PLLPSYINVLASKA Trigger: AGCCTTGGAAGCAAGAACATTTATATAAGAAGGGAGTAGAGGCAAGGATTCAGCTTGGCCAGGAGGCTGACAGTGGCCACCTGCCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTTTCCAACACTACGACTaGAGACCCAGAGTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LALHRRRNTEPGLGRLLFFQHYD*RPRVWK Trigger: CTTCCAGACTCTGGGTCTGCAGTCGTAGTGTTGGAA...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CAA 90 bp | CAGGGATTGTTAAGGCCACACACTGTGGTCTGTGGTCACTTCAGCTaGGAGGGAATTCTCACATTCCAACACTACGACTGCAGACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QGLLRPHTVVCGHFS*EGILTFQHYDCRPR Trigger: TCTGGGTCTGCAGTCGTAGTGTTGGAATGTGAGAATTCCCTCCAAGCTGAAGTGACCACAGACCACAGTGTGTGGCCTTAACAATCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CAA 90 bp | AGACGGGAGAATTGCTACATTACTCTTTATGCAGACCGTTCAGCTTaGGGTAGGGGTGTGCAGGTGTGGAGGGGTCTGATGAAGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: RRENCYITLYADRSA*GRGVQVWRGLMKLS Trigger: TGACAGCTTCATCAGACCCCTCCACACCTGCACACCCCTACCCAAAGCTGAACGGTCTGCATAAAGAGTAATGTAGCAATTCTCCCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | TTGATCATGAAGCACGCCACTCTGCCAGACACAAAGCGTTTTGGTAGGCATCGCTGCAGACCCAGAGTCTaGAAGGGATTAGGTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LIMKHATLPDTKRFGRHRCRPRV*KGLGSG Trigger: TCCTGAACCTAATCCCTTCCAGACTCTGGGTCTGCA...GCGATGCCTACCAAAACGCTTTGTGTCTGGCAGAGTGGCGTGCTTCATGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAACCCGTGAAGGCTGGCTGCTCTGGGGATCCTCAAACTTCCTATTTCCACGTGATATTGATTTTTaGGGTTTCTCTTGCTCCGGT | + |
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Preference number: 2 (lower is better) Translates to: PGTREGWLLWGSSNFLFPRDIDF*GFSCSG Trigger: ACCGGAGCAAGAGAAACCTCAAAAATCAATATCACG...TGGAAATAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGATGGAGACATTTCATGGAATAGAACCTCCTTTAATATTTCCTTATGGTTCCCCCACCCTACCCTaGCCCCGGCACAGAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GLMETFHGIEPPLIFPYGSPTLP*PRHRVG Trigger: GCCCACTCTGTGCCGGGGGCAGGGTAGGGTGGGGGA...ACCATAAGGAAATATTAAAGGAGGTTCTATTCCATGAAATGTCTCCATCAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCGAAAATGTGCATGGTTaGCAAGGCTGTTTTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: SEAGEPQACLHGSRFTYCENVHG*QGCFEF Trigger: AAATTCAAAACAGCCTTGCCAACCATGCACATTTTC...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | TTGATCATGAAGCACGCCACTCTGCCAGACACAAAGCGTTTTGGTAGGCATCGCGTGGTCACTTCAGCTTaGAGGGAATTCTCACATTCC | + |
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Preference number: 2 (lower is better) Translates to: LIMKHATLPDTKRFGRHRVVTSA*REFSHS Trigger: GGAATGTGAGAATTCCCTCCAAGCTGAAGTGACCAC...GCGATGCCTACCAAAACGCTTTGTGTCTGGCAGAGTGGCGTGCTTCATGATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTTAATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCGTGACAGGTTCACCATaGAGCTGCCCTAGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: HALMFVSWKIPDLVKLAIVTGSP*SCPSVG Trigger: TCCCACACTAGGGCAGCTCCATGGTGAACCTGTCAC...GATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAAGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCAATCACTTTCTGATCTaGGTTTTCATTTACTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SEAGEPQACLHGSRFTYCNHFLI*VFIYWV Trigger: AACCCAGTAAATGAAAACCCAGATCAGAAAGTGATT...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTACACACTGTGGTCTGTaGTCACTTCAGCTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: DTMLSSCELLQNSVTFGSTHCGL*SLQLGG Trigger: CCCTCCAAGCTGAAGTGACCACAGACCACAGTGTGT...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR-3UTR CCA 90 bp | CACACTGCACCGCCAGGAAGCAGGAAGAATGAATGTTGGTGCCTGGCTCCCTTTTTAATGTTTGTCTCCTaGAAGATTCCAGATCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HTAPPGSRKNECWCLAPFLMFVS*KIPDLV Trigger: GACAAGATCTGGAATCTTCCAGGAGACAAACATTAA...AAAGGGAGCCAGGCACCAACATTCATTCTTCCTGCTTCCTGGCGGTGCAGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGATAGATTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCCTCTTCCAAGCAGGCTaGACCCAGTCCTCACTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RDRLEIFILKEFGYWDCILFQAG*TQSSLR Trigger: CCTTAGTGAGGACTGGGTGCAGCCTGCTTGGAAGAG...GATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAATCTATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | TTGATCATGAAGCACGCCACTCTGCCAGACACAAAGCGTTTTGGTAGGCATCGCAGTTCATCTTCACTCTaGTTCATGCCTACTGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: LIMKHATLPDTKRFGRHRSSSSL*FMPTEI Trigger: AATTTCAGTAGGCATGAACCAGAGTGAAGATGAACT...GCGATGCCTACCAAAACGCTTTGTGTCTGGCAGAGTGGCGTGCTTCATGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTGAGGCTTCTTTTTCGTaGTTCCTCTCCTGCTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: DTMLSSCELLQNSVTFGSEASFS*FLSCCL Trigger: AAGACAGCAGGAGAGGAACCACGAAAAAGAAGCCTC...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | AGGGATAGATTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCCACAGAACCTGGCCTTaGGAGGCTTCTTTTTCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RDRLEIFILKEFGYWDCIHRTWP*EASFSW Trigger: CCACGAAAAAGAAGCCTCCCAAGGCCAGGTTCTGTG...GATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAATCTATCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR TCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTTTTCTCTTGCTCCGGTaGACCCTCAAAAAGAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: DTMLSSCELLQNSVTFGSFLLLR*TLKKNP Trigger: AGGATTCTTTTTGAGGGTTCACCGGAGCAAGAGAAA...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR TCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTTTAAAAGACCTCCAATaGATGTTTCCCCCACCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: DTMLSSCELLQNSVTFGSLKDLQ*MFPPPY Trigger: GTAGGGTGGGGGAAACATTCATTGGAGGTCTTTTAA...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR TCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTCCACCAAAGCAAGTTTaGCCTGCTCTGGAAAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: DTMLSSCELLQNSVTFGSPPKQV*PALENQ Trigger: TTGATTTTCCAGAGCAGGTCAAACTTGCTTTGGTGG...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACCCTCATTTGGCTCTTaGATGTTGAATGTTGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SRTSTFSSQSLDGRIATLPSFGS*MLNVGK Trigger: CTTGCCAACATTCAACATTCAAGAGCCAAATGAGGG...TAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR GCA 90 bp | GATGAAGCTGTCATCTGGGTTAGTCTGTGTGATCAGAGTATTCTGACCCAAGGCGTGAATGTGAAAAGCTaGAGGTTTGATGGAGACATT | + |
|
Preference number: 2 (lower is better) Translates to: DEAVIWVSLCDQSILTQGVNVKS*RFDGDI Trigger: AATGTCTCCATCAAACCTGCAGCTTTTCACATTCAC...GCCTTGGGTCAGAATACTCTGATCACACAGACTAACCCAGATGACAGCTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTAACTCTGCAGGAAGCTaGTATTTCCTATTCACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QNQYVQLSKSRRENCYITNSAGS*YFLFTA Trigger: GGCTGTGAATAGGAAATACCAGCTTCCTGCAGAGTT...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR TCA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTGAAAAGCTGCAGGTTTaGTGGAGACATTTCATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QNQYVQLSKSRRENCYITEKLQV*WRHFME Trigger: TTCCATGAAATGTCTCCATCAAACCTGCAGCTTTTC...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTGTTAAGAGATATTATGGCCATCAACTTTTATACTAGCCATCCACTTAAGGGCACCTCTGTCTATTaGTCAGTCTCGCATGCATCG | + |
|
Preference number: 2 (lower is better) Translates to: EVLRDIMAINFYTSHPLKGTSVY*SVSHAS Trigger: CGATGCATGCGAGACTGAGCAATAGACAGAGGTGCC...CTTAAGTGGATGGCTAGTATAAAAGTTGATGGCCATAATATCTCTTAACACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTGGGTTTTCAATTAACTaGGGTCCAAAAATGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: DTMLSSCELLQNSVTFGSGFSIN*GPKMHS Trigger: GCTGTGCATTTTTGGACCCCAGTTAATTGAAAACCC...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTGAGAATCACTTTCTaGTCTGGGTTTTCATTTACT | + |
|
Preference number: 2 (lower is better) Translates to: SRTSTFSSQSLDGRIATLLRITF*SGFSFT Trigger: AGTAAATGAAAACCCAGATCAGAAAGTGATTCTCAG...TAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGGATGGAGACATTTCATaGAATAGAACCTCCTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: TVQISISSLKQHRRQGDRDGDIS*NRTSFN Trigger: ATTAAAGGAGGTTCTATTCCATGAAATGTCTCCATC...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCTCTGGGTCCTTCTTTACCCTCATTTaGCTCTTGAATGTTGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: LEIFILKEFGYWDCISGSFFTLI*LLNVEC Trigger: ACATTCAACATTCAAGAGCCAAATGAGGGTAAAGAA...GGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CAA 90 bp | TTAAAAATCTGCATATTGGCTATGATGATGGTTCACAAATCCAACTaGCATTTGAAGTCCCTTCCCTCATTCTGTATCTGTCCATCCATC | + |
|
Preference number: 2 (lower is better) Translates to: LKICILAMMMVHKSN*HLKSLPSFCICPSI Trigger: GATGGATGGACAGATACAGAATGAGGGAAGGGACTTCAAATGCAAGTTGGATTTGTGAACCATCATCATAGCCAATATGCAGATTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTGTTAAGAGATATTATGGCCATCAACTTTTATACTAGCCATCCACTTAAGAAAGCAAGTTTGACCTaGTCTGGAAAATCAAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: EVLRDIMAINFYTSHPLKKASLT*SGKSRH Trigger: ATGCCTTGATTTTCCAGAGCAGGTCAAACTTGCTTT...CTTAAGTGGATGGCTAGTATAAAAGTTGATGGCCATAATATCTCTTAACACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | GTTCAGGACCCTGCTCCTGACAAGCACCAGCGATTCTaGGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VQDPAPDKHQRF*GWRATGLPSRV Trigger: GACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGAATCGCTGGTGCTTGTCAGGAGCAGGGTCCTGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | TGGCGAGGGTCAGGATCAGGGACAGAACAGTCAGGCTaGGGTCAGCAAATGCAGATGAGTCCCAGGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WRGSGSGTEQSG*GQQMQMSPRGL Trigger: CAGCCCCCTGGGACTCATCTGCATTTGCTGACCTCAGCCTGACTGTTCTGTCCCTGATCCTGACCCTCGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCCTCACTAAGGGCTGTTaGACCACCCAGGAACCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SEAGEPQACLHGSRFTYCLTKGC*TTQEPV Trigger: CACGGGTTCCTGGGTGGTCAAACAGCCCTTAGTGAG...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | AAGGGCGGGGCAGGCTCTGTAACCTGGACTCAGCCATaGCTCCCTAGAACCTCTTCTGTAGCACCTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KGGAGSVTWTQP*LPRTSSVAPPL Trigger: AAGAGGAGGTGCTACAGAAGAGGTTCTAGGGAGCCATGGCTGAGTCCAGGTTACAGAGCCTGCCCCGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | GGCTGTTTGACCACCCAGGAACCCGTGAAGGCTGGCTaGTCTGGGGATCCTCAAACTTCCTATTTCCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: GCLTTQEPVKAG*SGDPQTSYFHV Trigger: GACGTGGAAATAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCCTGGGTGGTCAAACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | GCAGACCGTTCAGCTTTGGGTAGGGGTGTGCAGGTGTaGAGGGGTCTGATGAAGCTGTCATCTGGGTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ADRSALGRGVQV*RGLMKLSSGLV Trigger: GACTAACCCAGATGACAGCTTCATCAGACCCCTCCACACCTGCACACCCCTACCCAAAGCTGAACGGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | GACCCAAGGCACCTCTGTCTATTGCTCAGTCTCGCATaGATCGTCCACTGTGGGGTAACAGCACAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DPRHLCLLLSLA*IVHCGVTAQTA Trigger: TGCTGTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAGAGGTGCCTTGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | ACTGCACCGCCAGGAAGCAGGAAGAATGAATGTTGGTaGCTGGCTCCCTTTCTCCAGCTTAGTCAGCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TAPPGSRKNECW*LAPFLQLSQPR Trigger: CCTAGGCTGACTAAGCTGGAGAAAGGGAGCCAGGCACCAACATTCATTCTTCCTGCTTCCTGGCGGTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR CCA 72 bp | AGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTaGGAGGCTTCTTTTTCGTGGTTCCTCTCCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLAQEEEHRTWP*EASFSWFLSCC Trigger: ACAGCAGGAGAGGAACCACGAAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | CACACTGCACCGCCAGGAAGCAGGAAGAATGAATGTTaGTGCCTGGCTCCCTTTCTCCAGCTTAGTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HTAPPGSRKNEC*CLAPFLQLSQP Trigger: AGGCTGACTAAGCTGGAGAAAGGGAGCCAGGCACCAACATTCATTCTTCCTGCTTCCTGGCGGTGCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR CCA 72 bp | TTTGACCACCCAGGAACCCGTGAAGGCTGGCTGCTCTaGGGATCCTCAAACTTCCTATTTCCACGTCGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FDHPGTREGWLL*GSSNFLFPRRD Trigger: ATCACGACGTGGAAATAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCCTGGGTGGTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | AAGTCTAGCCTTGCACAGGAGGAGGAACACAGAACCTaGCCTTGGGAGGCTTCTTTTTCGTGGTTCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSSLAQEEEHRT*PWEASFSWFLS Trigger: GGAGAGGAACCACGAAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCTGTGGTCACTTCAGCTaGGAGGGAATTCTCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: WLLGLHLWVQRKSSEITPCGHFS*EGILTF Trigger: GAATGTGAGAATTCCCTCCAAGCTGAAGTGACCACA...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | GTGTACAGGTTCCACCAAAGCAAGTTTGACCTGCTCTaGAAAATCAAGGCATCCACACTCTTACCCCGACCC | + |
|
Preference number: 3 (lower is better) Translates to: VYRFHQSKFDLL*KIKASTLLPRP Trigger: GGGTCGGGGTAAGAGTGTGGATGCCTTGATTTTCCAGAGCAGGTCAAACTTGCTTTGGTGGAACCTGTACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | CGTCCACTGTGGGGTAACAGCACAGACAGCAACCAGTaGGGACAGTTAAGAAATGAAGCTGTGGAGCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: RPLWGNSTDSNQ*GQLRNEAVELT Trigger: TGTAAGCTCCACAGCTTCATTTCTTAACTGTCCTCACTGGTTGCTGTCTGTGCTGTTACCCCACAGTGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | AGCTTGGAGGGAATTCTCACATTCCAACACTACGACTaGAGACCCAGAGTCTGGAAGGGATTAGGTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLEGILTFQHYD*RPRVWKGLGSG Trigger: TCCTGAACCTAATCCCTTCCAGACTCTGGGTCTGCAGTCGTAGTGTTGGAATGTGAGAATTCCCTCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | CTGACAGGGATTGTTAAGGCCACACACTGTGGTCTGTaGTCACTTCAGCTTGGAGGGAATTCTCACATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LTGIVKATHCGL*SLQLGGNSHIP Trigger: TGGAATGTGAGAATTCCCTCCAAGCTGAAGTGACCACAGACCACAGTGTGTGGCCTTAACAATCCCTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCTTAATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGCTGGTCACCAATCTaGGGAGAGAGAGTCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HALMFVSWKIPDLVKLAISWSPI*GERVLA Trigger: AGCCAAGACTCTCTCTCCCAAGATTGGTGACCAGCT...GATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAAGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR TCA 72 bp | GAAAGTCTATTTGAGGACTGTGGCTGGAAACACCCATaGGCTTCTGAAGCAGGGTTAGCAGGAGTCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ESLFEDCGWKHP*ASEAGLAGVLE Trigger: TTCTAGGACTCCTGCTAACCCTGCTTCAGAAGCTCATGGGTGTTTCCAGCCACAGTCCTCAAATAGACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | GTAAGGAGTGCTTTGTTAGCCAGGACAATAAGGGCTTaGGTACATTGCTCCCACTCATTCGACCCAACGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VRSALLARTIRA*VHCSHSFDPTE Trigger: TTCCGTTGGGTCGAATGAGTGGGAGCAATGTACTCAAGCCCTTATTGTCCTGGCTAACAAAGCACTCCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | CTTCAGTGTACAGGTTCCACCAAAGCAAGTTTGACCTaGTCTGGAAAATCAAGGCATCCACACTCTTACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LQCTGSTKASLT*SGKSRHPHSYP Trigger: GGGGTAAGAGTGTGGATGCCTTGATTTTCCAGAGCAGGTCAAACTTGCTTTGGTGGAACCTGTACACTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCATGAAGCACGCCACTCTGCCAGACACAAAGCGTTTTGGTAGGCATCGCCATCACTGTCCTAATTaGTCATTAGTCACTACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LIMKHATLPDTKRFGRHRHHCPN*SLVTTA Trigger: AGCAGTAGTGACTAATGACAAATTAGGACAGTGATG...GCGATGCCTACCAAAACGCTTTGTGTCTGGCAGAGTGGCGTGCTTCATGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | CAAAAAGAATCCTTAGTTCATCTTCACTCTGGTTCATaGCTACTGAAATTCAGGTGGGCAGTGGCGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QKESLVHLHSGS*LLKFRWAVARV Trigger: GACCCTCGCCACTGCCCACCTGAATTTCAGTAGGCATGAACCAGAGTGAAGATGAACTAAGGATTCTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | TGTATACTCTCCAGAGAAGGGGGTACTGCTGTAATTTaGGGTACCTCACTAACTCTTCAGTGTACAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CILSREGGTAVI*GTSLTLQCTGS Trigger: GGAACCTGTACACTGAAGAGTTAGTGAGGTACCCCAAATTACAGCAGTACCCCCTTCTCTGGAGAGTATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | TATGCAAAGGACAATCGGTCAAGACCACAGACCTTCTaGAACTTTCTAAGACTGGGGAATGTGTTCCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YAKDNRSRPQTF*NFLRLGNVFQV Trigger: CACCTGGAACACATTCCCCAGTCTTAGAAAGTTCCAGAAGGTCTGTGGTCTTGACCGATTGTCCTTTGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | TGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTaGCCATCAGTATCAACCATCAGAGAGGCTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CLSPGRFQILSS*PSVSTIREAVN Trigger: GTTCACAGCCTCTCTGATGGTTGATACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTGAACTATCTACCCATTaGGTCATCCACTCAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QNQYVQLSKSRRENCYITELSTH*VIHSGV Trigger: GACTCCTGAGTGGATGACCAAATGGGTAGATAGTTC...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | ACGAATGCCTGCTGTGTCCTGGAAAGGTTAGTTAAGTaGCCAGATAACCTATGCAAAGGACAATCGGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TNACCVLERLVK*PDNLCKGQSVK Trigger: CTTGACCGATTGTCCTTTGCATAGGTTATCTGGTCACTTAACTAACCTTTCCAGGACACAGCAGGCATTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | TTAGCCAATGTTGCCCTAGCCTTCACTGAGCCTCCTTaGAATCTAAATTATATGAGAACATGGTGCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LANVALAFTEPP*NLNYMRTWCLV Trigger: CACCAGGCACCATGTTCTCATATAATTTAGATTCCAAGGAGGCTCAGTGAAGGCTAGGGCAACATTGGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | CAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTaGCGTTTGGATCTATCTTGTAGTGAACAAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QCCLVVNCCRIL*RLDLSCSEQAS Trigger: GGAGGCTTGTTCACTACAAGATAGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | CAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTaGTACATTACTCTTTATGCAGACCGTTCAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QYVQLSKSRREN*YITLYADRSAL Trigger: CAAAGCTGAACGGTCTGCATAAAGAGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | TATACTAAAAGAGTTTGGCTACTGGGACTGCATCTCTaGGTCCAAAGGAAGTCCAGTGAAATCACACCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YTKRVWLLGLHL*VQRKSSEITPF Trigger: AAAGGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | AGATTGGAGATCTTTATACTAAAAGAGTTTGGCTACTaGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLEIFILKEFGY*DCISGSKGSPV Trigger: CACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGTTAAGAGATATTATGGCCATCAACTTTTATACTAGCCATCCACTTAAGACACAGAACCTGGCCTaGGGAGGCTTCTTTTTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: EVLRDIMAINFYTSHPLKTQNLA*GGFFFV Trigger: CACGAAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGT...CTTAAGTGGATGGCTAGTATAAAAGTTGATGGCCATAATATCTCTTAACACCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCTCTGGGTCCAAATCGAAAGTCTATTaGAGGACTGTGGCTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LEIFILKEFGYWDCISGSKSKVY*RTVAGN Trigger: GTTTCCAGCCACAGTCCTCAAATAGACTTTCGATTT...GGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | GAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTaGATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: EIFILKEFGYWD*ISGSKGSPVKS Trigger: TGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | CCACATCAACTATGGCCAGAAATTTCCTCACAGACATaGCTTAATGTTTGTCTCCTGGAAGATTCCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PHQLWPEISSQT*LNVCLLEDSRS Trigger: AGATCTGGAATCTTCCAGGAGACAAACATTAAGGCATGTCTGTGAGGAAATTTCTGGCCATAGTTGATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR CCA 72 bp | AAATTTCCTCACAGACATGCCTTAATGTTTGTCTCCTaGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KFPHRHALMFVS*KIPDLVKLAIS Trigger: ACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAAGGCATGTCTGTGAGGAAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| 3UTR TCA 72 bp | AGTCAGATTCTTGATTCTTTACCCTCATTTGGCTCTTaGATGTTGAATGTTGGCAAGTCTAGCCTTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SQILDSLPSFGS*MLNVGKSSLAQ Trigger: CTGTGCAAGGCTAGACTTGCCAACATTCAACATTCAAGAGCCAAATGAGGGTAAAGAATCAAGAATCTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | TGGATCTATCTTGTAGTGAACAAGCCTCCCAGTGGTTaGGATCTTAGGATATTGTTCCATATTGCAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WIYLVVNKPPSG*DLRILFHIASR Trigger: TCTGCTTGCAATATGGAACAATATCCTAAGATCTCAACCACTGGGAGGCTTGTTCACTACAAGATAGATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | TCAAACTTCCTATTTCCACGTCGTGATATTGATTTTTaGGGTTTCTCTTGCTCCGGTGAACCCTCAAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNFLFPRRDIDF*GFSCSGEPSKR Trigger: TCTTTTTGAGGGTTCACCGGAGCAAGAGAAACCTCAAAAATCAATATCACGACGTGGAAATAGGAAGTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CCA 72 bp | ATGCAATTCTTTGCTACCCTGGCAATTAACCAGACCTaGACTCTAAAAGCTAAACTTGGTCTAAGTAACATT | + |
|
Preference number: 3 (lower is better) Translates to: MQFFATLAINQT*TLKAKLGLSNI Trigger: AATGTTACTTAGACCAAGTTTAGCTTTTAGAGTCCAGGTCTGGTTAATTGCCAGGGTAGCAAAGAATTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | CTGAACTCACGCTTCATTGTTCTGAGAATCACTTTCTaGTCTGGGTTTTCATTTACTGGGTTTTCAATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNSRFIVLRITF*SGFSFTGFSIN Trigger: GTTAATTGAAAACCCAGTAAATGAAAACCCAGATCAGAAAGTGATTCTCAGAACAATGAAGCGTGAGTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR GCA 72 bp | AATAATGCATTTTTGACTCCTGTTTATATTGGTGCATaGAATTCTTTGCTACCCTGGCAATTAACCAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: NNAFLTPVYIGA*NSLLPWQLTRP Trigger: AGGTCTGGTTAATTGCCAGGGTAGCAAAGAATTGCATGCACCAATATAAACAGGAGTCAAAAATGCATTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGATGGAGACATTTCATGGAATAGAACCTCCTTTAATATTTCCTTATGGTAAATGCACAGCGGTGTaGTGTAGTAATCAGATATAC | + |
|
Preference number: 3 (lower is better) Translates to: GLMETFHGIEPPLIFPYGKCTAV*CSNQIY Trigger: GTATATCTGATTACTACACAACACCGCTGTGCATTT...ACCATAAGGAAATATTAAAGGAGGTTCTATTCCATGAAATGTCTCCATCAAACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | ATTCATTATGCATGCTTCCAGTGTTTTAAATCAGGATaGATTCCAGCAGATAAGAAAGAGAGTTCTGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IHYACFQCFKSG*IPADKKESSEE Trigger: CTCTTCAGAACTCTCTTTCTTATCTGCTGGAATTCATCCTGATTTAAAACACTGGAAGCATGCATAATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR TCA 72 bp | GCGCAGCCTAATCACAACTATTACGTCACTACAATGTaGAGTTCATCTTCGATTAATAATGCATTTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: AQPNHNYYVTTM*SSSSINNAFLT Trigger: AGTCAAAAATGCATTATTAATCGAAGATGAACTTCACATTGTAGTGACGTAATAGTTGTGATTAGGCTGCGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAACAGCCTCCGAGGGCAGGTGGACCTCCAACCCTCTTACCTAGAGAGCCCCAGAGCCACAGACTaGTCGGCGGAGATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNSLRGQVDLQPSYLESPRATD*SAEMNL Trigger: CAAGTTCATCTCCGCCGACCAGTCTGTGGCTCTGGG...GCTCTCTAGGTAAGAGGGTTGGAGGTCCACCTGCCCTCGGAGGCTGTTGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCCCACCGCCTTGCTGCTaGGCTCAATCATCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAGEPQACLHGSRFTYCPPPCC*AQSSGA Trigger: TGCACCAGATGATTGAGCTCAGCAGCAAGGCGGTGG...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | GCAAGTAAGCAGAGGGCGGTCCAGTTCCCAGAGGCAGGTGGCCACTGTCAGCCTAGATCTCGAGGGCTTTaGCCTTCTTGCCATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASKQRAVQFPEAGGHCQPRSRGL*PSCHLL Trigger: CAGCAAATGGCAAGAAGGTCAAAGCCCTCGAGATCT...AGGCTGACAGTGGCCACCTGCCTCTGGGAACTGGACCGCCCTCTGCTTACTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCTATTGCTCAGTCTCGCATGCATCGTCCACTGTGGGGTAACAGCACAGACGGGTGTAGCTACGCTTaGCCAGCTCCCCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSIAQSRMHRPLWGNSTDGCSYA*PAPPEP Trigger: TGGCTCTGGGGGAGCTGGTCAAGCGTAGCTACACCC...GTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCAGCTCAATCATCTGGTaGAGCCGAAGCTTCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEAGEPQACLHGSRFTYCSSIIW*SRSFRQ Trigger: CTGCCGGAAGCTTCGGCTGCACCAGATGATTGAGCT...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCTCGGGGTCTTCTGGTTaGAAACACCAGGGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEAGEPQACLHGSRFTYCSGSSG*KHQGHL Trigger: GAGGTGACCCTGGTGTTTCCAACCAGAAGACCCCGA...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | GATTCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACGGCGTTCATGGCATCTaGGCTCATCCTCAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSEAGEPQACLHGSRFTYGVHGI*AHPQHA Trigger: GGCATGCTGAGGATGAGCCCAGATGCCATGAACGCC...GTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTCCAGCTGGGAAGGCTTaGCCGGGGTGTAGCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LALHRRRNTEPGLGRLLFPAGKA*PGCSYA Trigger: AGCGTAGCTACACCCCGGCCAAGCCTTCCCAGCTGG...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | CTACGACTGCAGACCCAGAGTCTGGAAGGGATTAGGTTCAGGACCCTGCTCCTGTCAGAGCCTGCTCCTTaGAGTACTGCAGGGCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLQTQSLEGIRFRTLLLSEPAP*STAGRK Trigger: CTTACGCCCTGCAGTACTTCAAGGAGCAGGCTCTGA...CAGGAGCAGGGTCCTGAACCTAATCCCTTCCAGACTCTGGGTCTGCAGTCGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCCCAGAAAGAGGAACTTaGCCGTGGATACCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEAGEPQACLHGSRFTYCPERGT*PWIPLA Trigger: AGCCAGAGGTATCCACGGTCAAGTTCCTCTTTCTGG...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGTCTTGGCTCTGAGGGTGACAGGTTCACCATGGAGCTGCCCTAGTGTGACGAGAAAGGTCTGCTaGTCAGAGACGGGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERVLALRVTGSPWSCPSVTRKVC*SETGSA Trigger: TGCTGACCCCGTCTCTGAGCAGCAGACCTTTCTCGT...CACACTAGGGCAGCTCCATGGTGAACCTGTCACCCTCAGAGCCAAGACTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCTATTGCTCAGTCTCGCATGCATCGTCCACTGTGGGGTAACAGCACAGACCTCTTCCTCAATGCATaGTCCACGCTGTGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIAQSRMHRPLWGNSTDLFLNA*STLWPR Trigger: CCGGGGCCACAGCGTGGAGCATGCATTGAGGAAGAG...GTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR GCA 90 bp | CTACGACTGCAGACCCAGAGTCTGGAAGGGATTAGGTTCAGGACCCTGCTCCTGGTGAGGCCCACATCCTaGGGGATGATGATCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQTQSLEGIRFRTLLLVRPTS*GMMILH Trigger: ATGCAGGATCATCATCCCGCAGGATGTGGGCCTCAC...CAGGAGCAGGGTCCTGAACCTAATCCCTTCCAGACTCTGGGTCTGCAGTCGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR GCA 90 bp | TCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACTGCATGTTCCTTAGCCTGTaGAAACCCCGCTCCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEAGEPQACLHGSRFTYCMFLSL*KPRSYC Trigger: ACAGTAGGAGCGGGGTTTGCACAGGCTAAGGAACAT...GCAGTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | GATTCTGAGGCTGGAGAGCCACAGGCCTGCCTTCACGGGTCTAGGTTTACGTACCATGGTAGAAGTCCCTaGCAGCGTACCCAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSEAGEPQACLHGSRFTYHGRSP*QRTQSC Trigger: ACAGCTTTGGGTACGCTGCCAGGGACTTCTACCATG...GTACGTAAACCTAGACCCGTGAAGGCAGGCCTGTGGCTCTCCAGCCTCAGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTCGGTCAGGTCTACTGTaGCTCCGCCACTGTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LALHRRRNTEPGLGRLLFRSGLL*LRHCQQ Trigger: TTGTTGACAGTGGCGGAGGCACAGTAGACCTGACCG...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCCTGGTGTCAGCAAGATaGTGGTCGGGGTCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLGLHLWVQRKSSEITPLVSAR*WSGSSG Trigger: ACCAGAAGACCCCGACCACCATCTTGCTGACACCAG...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | CTGTCTATTGCTCAGTCTCGCATGCATCGTCCACTGTGGGGTAACAGCACAGACCTGAGCTCAATCATCTaGTGCAGCCGAAGCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIAQSRMHRPLWGNSTDLSSII*CSRSFR Trigger: CCGGAAGCTTCGGCTGCACCAGATGATTGAGCTCAG...GTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CAA 72 bp | CTTGATAGCTGGTCACCAATCTTGGGAGAGAGAGTCTaGGCTCTGAGGGTGACAGGTTCACCATGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSWSPILGERV*ALRVTGSPWSC Trigger: GCAGCTCCATGGTGAACCTGTCACCCTCAGAGCCAAGACTCTCTCTCCCAAGATTGGTGACCAGCTATCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| CDS-3UTR TCA 90 bp | CTTGATAGCTGGTCACCAATCTTGGGAGAGAGAGTCTTGGCTCTGAGGGTGACATCAGAGCCTGCTCCTTaGAGTACTGCAGGGCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDSWSPILGERVLALRVTSEPAP*STAGRK Trigger: CTTACGCCCTGCAGTACTTCAAGGAGCAGGCTCTGA...TGTCACCCTCAGAGCCAAGACTCTCTCTCCCAAGATTGGTGACCAGCTATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| CDS-3UTR TCA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTAGGCAGCTTCTCTCATaGACTGCTTGGCTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LALHRRRNTEPGLGRLLFRQLLS*TAWLVA Trigger: AGCAACCAGCCAAGCAGTTCATGAGAGAAGCTGCCT...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTATTGCTTGGCCTCACTaGGGTCCAGGTCATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LALHRRRNTEPGLGRLLFIAWPH*GPGHGR Trigger: TCTACCATGACCTGGACCCCAGTGAGGCCAAGCAAT...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| 3UTR CAA 72 bp | CATTCGACCCAACGGAAACCTTGGCCCATGGAGTACTaGGTTCCTTTGATCATGAAGCACGCCACTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTQRKPWPMEY*VPLIMKHATLP Trigger: TGGCAGAGTGGCGTGCTTCATGATCAAAGGAACCAAGTACTCCATGGGCCAAGGTTTCCGTTGGGTCGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTAGATCTCGAGGGCTTTaGCCTTCTTGCCATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LALHRRRNTEPGLGRLLFRSRGL*PSCHLL Trigger: CAGCAAATGGCAAGAAGGTCAAAGCCCTCGAGATCT...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTCCCGGAGGTGCTCGATaGTGCTGTCGATGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNQYVQLSKSRRENCYITPGGAR*CCRWSA Trigger: AGCCGACCATCGACAGCATCATCGAGCACCTCCGGG...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR TCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTCGACGGCCGTGGCCTTaGTCTCAGTGTCCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: DTMLSSCELLQNSVTFGSRRPWP*SQCPRT Trigger: AGTTCGGGGACACTGAGATCAAGGCCACGGCCGTCG...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR GCA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCTCAGTGTCCCCGAACTaGATGATGGTCTGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLLGLHLWVQRKSSEITPSVSPN*MMVWIS Trigger: AGAGATCCAGACCATCATGCAGTTCGGGGACACTGA...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGCTGGCCATCAGTATCAACCATCAGAGAGGCTGTGAACATCTACGGCCATAGCCACTGGACGTaGTCCCAAAGTCGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSWPSVSTIREAVNIYGHSHWT*SQSRWP Trigger: TGGCCATCGACTTTGGGACCACGTCCAGTGGCTATG...GCCGTAGATGTTCACAGCCTCTCTGATGGTTGATACTGATGGCCAGCTTGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGCTGGCCATCAGTATCAACCATCAGAGAGGCTGTGAACATCTACGGCAGTACAGCCATTGCTTaGCCTCACTGGGGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSWPSVSTIREAVNIYGSTAIA*PHWGPG Trigger: ACCTGGACCCCAGTGAGGCCAAGCAATGGCTGTACT...GCCGTAGATGTTCACAGCCTCTCTGATGGTTGATACTGATGGCCAGCTTGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCAAAAAGGTCCGACTCTaGCGGTTACGTCGAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: WLLGLHLWVQRKSSEITPKKVRL*RLRRTC Trigger: ACATGTTCGACGTAACCGGCAGAGTCGGACCTTTTT...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGCTGGCCATCAGTATCAACCATCAGAGAGGCTGTGAACATCTACGGCATTGCTTGGCCTCACTaGGGTCCAGGTCATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSWPSVSTIREAVNIYGIAWPH*GPGHGR Trigger: TCTACCATGACCTGGACCCCAGTGAGGCCAAGCAAT...GCCGTAGATGTTCACAGCCTCTCTGATGGTTGATACTGATGGCCAGCTTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGTGTCGATGGTCGGCTTaGAGAGGGCGTTCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVQISISSLKQHRRQGDRCRWSA*RGRSWH Trigger: ATGCCATGAACGCCCTCTTCAAGCCGACCATCGACA...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR TCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTGATACCTCTGGCTTCTaGAACAGGTCCCGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTMLSSCELLQNSVTFGSDTSGF*NRSRRC Trigger: GCACCTCCGGGACCTGTTTCAGAAGCCAGAGGTATC...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | GTGAACATCTACGGCATGGGTGAACTCTTGATAGCTGGTCACCAATCTTGGGAGGTGGAACTTCCTCTCTaGTGTCAGCAAGATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNIYGMGELLIAGHQSWEVELPL*CQQDGG Trigger: ACCACCATCTTGCTGACACCAGAGAGGAAGTTCCAC...CTCCCAAGATTGGTGACCAGCTATCAAGAGTTCACCCATGCCGTAGATGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGAGGAGAAGGGCAGAGTaGTGTTCAGGGGATTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVQISISSLKQHRRQGDRRRRAE*CSGDWF Trigger: GAACCAATCCCCTGAACATCACTCTGCCCTTCTCCT...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | ACTTCCTATTTCCACGTCGTGATATTGATTTTTGAGGTTTCTCTTGCTCCGGTGAGGGCAATGATGAGCTaGTCCGAGTTCTCGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSYFHVVILIFEVSLAPVRAMMS*SEFSGE Trigger: CTCCCCCGAGAACTCGGAGCAGCTCATCATTGCCCT...CACCGGAGCAAGAGAAACCTCAAAAATCAATATCACGACGTGGAAATAGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTCAAAAGGGGCGCCTCTaGAAAGCCACCCACCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QNQYVQLSKSRRENCYITQKGRL*KATHQK Trigger: TTTCTGGTGGGTGGCTTTGCAGAGGCGCCCCTTTTG...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | AGGGATAGATTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCGTCTGCACTGCCTGCTaGAAAAGGGGCGCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRLEIFILKEFGYWDCIVCTAC*KRGASA Trigger: TGCAGAGGCGCCCCTTTTGCAGCAGGCAGTGCAGAC...GATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAATCTATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | AGCTTACAGGCAGCAGCGTTATTAACCAAAATTGCGAGTATTTTCCCTTTCAAATGGTCTGGATCTCTCTaGGGGCGGGAACCGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQAAALLTKIASIFPFKWSGSL*GREPLC Trigger: GCACAGCGGTTCCCGCCCGCAGAGAGATCCAGACCA...TTTGAAAGGGAAAATACTCGCAATTTTGGTTAATAACGCTGCTGCCTGTAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | GTGAACATCTACGGCATGGGTGAACTCTTGATAGCTGGTCACCAATCTTGGGAGGCATCGTTCAAGATATaGGAAGGGGACAGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNIYGMGELLIAGHQSWEASFKI*EGDRGV Trigger: AACACCTCTGTCCCCTTCCCATATCTTGAACGATGC...CTCCCAAGATTGGTGACCAGCTATCAAGAGTTCACCCATGCCGTAGATGTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR CCA 90 bp | GACACAATGCTGTCTAGTTGTGAACTGCTGCAGAATTCTGTGACGTTTGGATCTCATAGCCACTGGACGTaGTCCCAAAGTCGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTMLSSCELLQNSVTFGSHSHWT*SQSRWP Trigger: TGGCCATCGACTTTGGGACCACGTCCAGTGGCTATG...AGATCCAAACGTCACAGAATTCTGCAGCAGTTCACAACTAGACAGCATTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | AACCTATGCAAAGGACAATCGGTCAAGACCACAGACCTTCTGGAACTTTCTAAGAGTACAGCCATTGCTTaGCCTCACTGGGGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLCKGQSVKTTDLLELSKSTAIA*PHWGPG Trigger: ACCTGGACCCCAGTGAGGCCAAGCAATGGCTGTACT...CTTAGAAAGTTCCAGAAGGTCTGTGGTCTTGACCGATTGTCCTTTGCATAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | TTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCTCTGGGTCCGACCGTGGATACCTCTaGCTTCTGAAACAGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEIFILKEFGYWDCISGSDRGYL*LLKQVP Trigger: CGGGACCTGTTTCAGAAGCCAGAGGTATCCACGGTC...GGACCCAGAGATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR TCA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGTCTGGTAACCGTATCTaGTGGACGGTCAGGTCTACT | + |
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Preference number: 4 (lower is better) Translates to: TVQISISSLKQHRRQGDRSGNRI*WTVRST Trigger: AGTAGACCTGACCGTCCATCAGATACGGTTACCAGA...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | TGCCTTAATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGAGTTCCTTCAGAGCCTaGTCCTTGAAGTACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLNVCLLEDSRSCQAGHQSSFRA*SLKYCR Trigger: CCTGCAGTACTTCAAGGAGCAGGCTCTGAAGGAACT...CTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR CCA 90 bp | TTAATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGTATCGTGGTCGGGGTCTTCTaGTTGGAAACACCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LMFVSWKIPDLVKLAISIVVGVF*LETPGS Trigger: TGACCCTGGTGTTTCCAACCAGAAGACCCCGACCAC...GATACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR CCA 90 bp | TTAATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGTATCCTGGTGTCAGCAAGATaGTGGTCGGGGTCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMFVSWKIPDLVKLAISILVSAR*WSGSSG Trigger: ACCAGAAGACCCCGACCACCATCTTGCTGACACCAG...GATACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR GCA 90 bp | CTTGGAGGGAATTCTCACATTCCAACACTACGACTGCAGACCCAGAGTCTGGAATCACAAAGTCCACATTaGTCTTCCTCAATGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGNSHIPTLRLQTQSLESQSPH*SSSMHA Trigger: AGCATGCATTGAGGAAGAGCAATGTGGACTTTGTGA...TTCCAGACTCTGGGTCTGCAGTCGTAGTGTTGGAATGTGAGAATTCCCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | CAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTACTGTGGAACTTCCTCTCTaGTGTCAGCAAGATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNQYVQLSKSRRENCYITVELPL*CQQDGG Trigger: ACCACCATCTTGCTGACACCAGAGAGGAAGTTCCAC...AGTAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | AATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGTATCAACATGGTAGAAGTCCCTaGCAGCGTACCCAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVCLLEDSRSCQAGHQYQHGRSP*QRTQSC Trigger: ACAGCTTTGGGTACGCTGCCAGGGACTTCTACCATG...TTGATACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR GCA 90 bp | ACTTCCTATTTCCACGTCGTGATATTGATTTTTGAGGTTTCTCTTGCTCCGGTGGCTTCTCTCATGAACTaGTTGGCTGGTTGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSYFHVVILIFEVSLAPVASLMN*LAGCFQ Trigger: CTGGAAGCAACCAGCCAAGCAGTTCATGAGAGAAGC...CACCGGAGCAAGAGAAACCTCAAAAATCAATATCACGACGTGGAAATAGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | TCCAGAACCAGTACGTTCAGCTCTCAAAGTCTAGACGGGAGAATTGCTACATTAGCATCGTTCAAGATATaGGAAGGGGACAGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTSTFSSQSLDGRIATLASFKI*EGDRGV Trigger: AACACCTCTGTCCCCTTCCCATATCTTGAACGATGC...TAATGTAGCAATTCTCCCGTCTAGACTTTGAGAGCTGAACGTACTGGTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CAA 72 bp | ATGTATACTCTCCAGAGAAGGGGGTACTGCTGTAATTaGGGGTACCTCACTAACTCTTCAGTGTACAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: MYTLQRRGYCCN*GYLTNSSVYRF Trigger: GAACCTGTACACTGAAGAGTTAGTGAGGTACCCCAAATTACAGCAGTACCCCCTTCTCTGGAGAGTATACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CCA 90 bp | GAGGTGTTAAGAGATATTATGGCCATCAACTTTTATACTAGCCATCCACTTAAGGTGGTCGGGGTCTTCTaGTTGGAAACACCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVLRDIMAINFYTSHPLKVVGVF*LETPGS Trigger: TGACCCTGGTGTTTCCAACCAGAAGACCCCGACCAC...CTTAAGTGGATGGCTAGTATAAAAGTTGATGGCCATAATATCTCTTAACACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | GGTTTGATGGAGACATTTCATGGAATAGAACCTCCTTTAATATTTCCTTATGGTACGAGAAAGGTCTGCTaGTCAGAGACGGGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLMETFHGIEPPLIFPYGTRKVC*SETGSA Trigger: TGCTGACCCCGTCTCTGAGCAGCAGACCTTTCTCGT...ACCATAAGGAAATATTAAAGGAGGTTCTATTCCATGAAATGTCTCCATCAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR GCA 90 bp | AGCTTACAGGCAGCAGCGTTATTAACCAAAATTGCGAGTATTTTCCCTTTCAAAAGTTCCTTCAGAGCCTaGTCCTTGAAGTACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQAAALLTKIASIFPFKSSFRA*SLKYCR Trigger: CCTGCAGTACTTCAAGGAGCAGGCTCTGAAGGAACT...TTTGAAAGGGAAAATACTCGCAATTTTGGTTAATAACGCTGCTGCCTGTAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CAA 72 bp | TTGGCTATGATGATGGTTCACAAATCCAACTTGCATTaGAAGTCCCTTCCCTCATTCTGTATCTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMMMVHKSNLH*KSLPSFCICPS Trigger: GGATGGACAGATACAGAATGAGGGAAGGGACTTCAAATGCAAGTTGGATTTGTGAACCATCATCATAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR TCA 90 bp | AGCTTACAGGCAGCAGCGTTATTAACCAAAATTGCGAGTATTTTCCCTTTCAAAACCAGATTTCTCCTATaGCATTCTCCACCAAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQAAALLTKIASIFPFKTRFLL*HSPPKR Trigger: CCTTTTTGGTGGAGAATGTCATAGGAGAAATCTGGT...TTTGAAAGGGAAAATACTCGCAATTTTGGTTAATAACGCTGCTGCCTGTAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| 3UTR CAA 72 bp | TGCATATTGGCTATGATGATGGTTCACAAATCCAACTaGCATTTGAAGTCCCTTCCCTCATTCTGTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CILAMMMVHKSN*HLKSLPSFCIC Trigger: ACAGATACAGAATGAGGGAAGGGACTTCAAATGCAAGTTGGATTTGTGAACCATCATCATAGCCAATATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CCA 90 bp | ACGGCCGTGGCCTTGATCTCAGTGTCCCCGAACTGCATGATGGTCTaGATCTCTCTGCGGGCGGGAACCGCTGTGCCGCCGCTCCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAVALISVSPNCMMV*ISLRAGTAVPPLPV Trigger: CACGGGGAGCGGCGGCACAGCGGTTCCCGCCCGCAGAGAGATCCAGACCATCATGCAGTTCGGGGACACTGAGATCAAGGCCACGGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | AAGGGCAACAGCCTCCGAGGGCAGGTGGACCTCCAACCCTCTTACCTAGAGAGCGGGGACCGGCGCACCTaGATAACGGCAGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGNSLRGQVDLQPSYLESGDRRT*ITAGSR Trigger: CCTGGACCCTGCCGTTATCAAGGTGCGCCGGTCCCC...GCTCTCTAGGTAAGAGGGTTGGAGGTCCACCTGCCCTCGGAGGCTGTTGCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 90 bp | GTGGTTATGTCGACGGCCGTGGCCTTGATCTCAGTGTCCCCGAACTaGATGATGGTCTGGATCTCTCTGCGGGCGGGAACCGCTGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VVMSTAVALISVSPN*MMVWISLRAGTAVP Trigger: CGGCACAGCGGTTCCCGCCCGCAGAGAGATCCAGACCATCATGCAGTTCGGGGACACTGAGATCAAGGCCACGGCCGTCGACATAACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | AAGGGCAACAGCCTCCGAGGGCAGGTGGACCTCCAACCCTCTTACCTAGAGAGCCTCCAAGTACAGCCATaGCTTGGCCTCACTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGNSLRGQVDLQPSYLESLQVQP*LGLTGV Trigger: GACCCCAGTGAGGCCAAGCAATGGCTGTACTTGGAG...GCTCTCTAGGTAAGAGGGTTGGAGGTCCACCTGCCCTCGGAGGCTGTTGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS TCA 90 bp | GCAAAAGGGGCGCCTCTGCAAAGCCACCCACCAGAAAGAGGAACTTaGCCGTGGATACCTCTGGCTTCTGAAACAGGTCCCGGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AKGAPLQSHPPERGT*PWIPLASETGPGGA Trigger: AGCACCTCCGGGACCTGTTTCAGAAGCCAGAGGTATCCACGGTCAAGTTCCTCTTTCTGGTGGGTGGCTTTGCAGAGGCGCCCCTTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066285.6 ENSMUST00000238055.2 |
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| CDS GCA 90 bp | GGTGCCCCTCTGGTAACCGTATCTGATGGACGGTCAGGTCTACTGTaGCTCCGCCACTGTCAACAACCACGTACTTGTCCCCTTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAPLVTVSDGRSGLL*LRHCQQPRTCPLPP Trigger: TGGAGGAAGGGGACAAGTACGTGGTTGTTGACAGTGGCGGAGGCACAGTAGACCTGACCGTCCATCAGATACGGTTACCAGAGGGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS TCA 90 bp | CTCCCAGGGATCCGTACGGTCCACCTGTTGCTTTGTACAGCTCCTTaGGGTGCCCCTCTGGTAACCGTATCTGATGGACGGTCAGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LPGIRTVHLLLCTAP*GAPLVTVSDGRSGL Trigger: TAGACCTGACCGTCCATCAGATACGGTTACCAGAGGGGCACCTCAAGGAGCTGTACAAAGCAACAGGTGGACCGTACGGATCCCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | CCAGGAACCCGTGAAGGCTGGCTGCTCTGGGGATCCTCAAACTTCCTATTTCCAGGTCCACCTGTTGCTTaGTACAGCTCCTTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTREGWLLWGSSNFLFPGPPVA*YSSLRC Trigger: GCACCTCAAGGAGCTGTACAAAGCAACAGGTGGACC...TGGAAATAGGAAGTTTGAGGATCCCCAGAGCAGCCAGCCTTCACGGGTTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCCTGTCGATGGTCGGCTaGAAGAGGGCGTTCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WLLGLHLWVQRKSSEITPLSMVG*KRAFMA Trigger: TGCCATGAACGCCCTCTTCAAGCCGACCATCGACAG...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 90 bp | CTGCTGCTGCTGCTGCTATTTCCCACCTGGAGTCACACTTCAGCTTaGTCTTTCCTTTGCAGCCACAGAACCCGTACATGCCGACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLFPTWSHTSA*SFLCSHRTRTCRHS Trigger: AGAGTGTCGGCATGTACGGGTTCTGTGGCTGCAAAGGAAAGAGCAAGCTGAAGTGTGACTCCAGGTGGGAAATAGCAGCAGCAGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237297.2 |
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| CDS-3UTR CAA 90 bp | TTGTCAAGCTGGCCATCAGTATCAACCATCAGAGAGGCTGTGAACATCTACGGCCTCCAAGTACAGCCATaGCTTGGCCTCACTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSWPSVSTIREAVNIYGLQVQP*LGLTGV Trigger: GACCCCAGTGAGGCCAAGCAATGGCTGTACTTGGAG...GCCGTAGATGTTCACAGCCTCTCTGATGGTTGATACTGATGGCCAGCTTGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR CAA 90 bp | CTAGCCTTGCACAGGAGGAGGAACACAGAACCTGGCCTTGGGAGGCTTCTTTTTACCAGAAAGAGGAACTaGACCGTGGATACCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LALHRRRNTEPGLGRLLFTRKRN*TVDTSG Trigger: GCCAGAGGTATCCACGGTCAAGTTCCTCTTTCTGGT...AAAAAGAAGCCTCCCAAGGCCAGGTTCTGTGTTCCTCCTCCTGTGCAAGGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS TCA 90 bp | CCACGTACTTGTCCCCTTCCTCCAGCTCAGACCAGATTTCTCCTATaGCATTCTCCACCAAAAAGGTCCGACTCTGCCGGTTACGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRTCPLPPAQTRFLL*HSPPKRSDSAGYVE Trigger: TTCGACGTAACCGGCAGAGTCGGACCTTTTTGGTGGAGAATGTCATAGGAGAAATCTGGTCTGAGCTGGAGGAAGGGGACAAGTACGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | TGGCTACTGGGACTGCATCTCTGGGTCCAAAGGAAGTCCAGTGAAATCACACCCATGATGATCCTGCATTaGTCGCCAAAAGCGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLLGLHLWVQRKSSEITPMMILH*SPKAVC Trigger: GCAGACCGCTTTTGGCGACAAATGCAGGATCATCAT...GGGTGTGATTTCACTGGACTTCCTTTGGACCCAGAGATGCAGTCCCAGTAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 90 bp | GACCAGATTTCTCCTATGACATTCTCCACCAAAAAGGTCCGACTCTaGCGGTTACGTCGAACATGTTCCTTAGCCTGTGCAAACCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DQISPMTFSTKKVRL*RLRRTCSLACANPA Trigger: AGCGGGGTTTGCACAGGCTAAGGAACATGTTCGACGTAACCGGCAGAGTCGGACCTTTTTGGTGGAGAATGTCATAGGAGAAATCTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 90 bp | CGGAGAGGAATATGTAGATGTGGGGGCTGTTTCTGCTGCTGCTGCTaGTATTTCCCACCTGGAGTCACACTTCAGCTTGCTCTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRGICRCGGCFCCCC*YFPPGVTLQLALSF Trigger: AAAGGAAAGAGCAAGCTGAAGTGTGACTCCAGGTGGGAAATAGCAGCAGCAGCAGCAGAAACAGCCCCCACATCTACATATTCCTCTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237297.2 |
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| CDS-3UTR CAA 90 bp | CTGTCTATTGCTCAGTCTCGCATGCATCGTCCACTGTGGGGTAACAGCACAGACAAGTCGATCCCCACTTaGACACTCTTTGAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSIAQSRMHRPLWGNSTDKSIPT*TLFEVV Trigger: AACCACCTCAAAGAGTGTCAAAGTGGGGATCGACTT...GTCTGTGCTGTTACCCCACAGTGGACGATGCATGCGAGACTGAGCAATAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | AGGGATAGATTGGAGATCTTTATACTAAAAGAGTTTGGCTACTGGGACTGCATCCTGGCACTGTACCCATaGACCACCGCCTTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDRLEIFILKEFGYWDCILALYP*TTALLL Trigger: CAGCAGCAAGGCGGTGGTCAATGGGTACAGTGCCAG...GATGCAGTCCCAGTAGCCAAACTCTTTTAGTATAAAGATCTCCAATCTATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGGGTGCAGCAGCTCTTTaGCGAGACTCAAAGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: TVQISISSLKQHRRQGDRGAAAL*RDSKAI Trigger: GATTGCCTTTGAGTCTCGCAAAAGAGCTGCTGCACC...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | AGCTTACAGGCAGCAGCGTTATTAACCAAAATTGCGAGTATTTTCCCTTTCAAATCGACGGCCGTGGCCTaGATCTCAGTGTCCCCGAAC | + |
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Preference number: 5 (lower is better) Translates to: SLQAAALLTKIASIFPFKSTAVA*ISVSPN Trigger: GTTCGGGGACACTGAGATCAAGGCCACGGCCGTCGA...TTTGAAAGGGAAAATACTCGCAATTTTGGTTAATAACGCTGCTGCCTGTAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGAGGGCTTTGACCTTCTaGCCATTTGCTGCTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: TVQISISSLKQHRRQGDRRALTF*PFAAVK Trigger: CTTAACAGCAGCAAATGGCAAGAAGGTCAAAGCCCT...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGAAGATCTCGAGGGCTTaGACCTTCTTGCCATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TVQISISSLKQHRRQGDRKISRA*TFLPFA Trigger: AGCAAATGGCAAGAAGGTCAAAGCCCTCGAGATCTT...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | ACAGTGCAGATTTCTATCAGCTCGCTTAAGCAACATAGGAGGCAAGGAGATAGGTTCACAAAGTCCACATaGCTCTTCCTCAATGCATGC | + |
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Preference number: 5 (lower is better) Translates to: TVQISISSLKQHRRQGDRFTKST*LFLNAC Trigger: GCATGCATTGAGGAAGAGCAATGTGGACTTTGTGAA...CCTATCTCCTTGCCTCCTATGTTGCTTAAGCGAGCTGATAGAAATCTGCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | GAGGTGTTAAGAGATATTATGGCCATCAACTTTTATACTAGCCATCCACTTAAGTCGGCGGAGATGAACTaGTCGAAGACGTCGGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: EVLRDIMAINFYTSHPLKSAEMN*SKTSVH Trigger: GTGCACCGACGTCTTCGACAAGTTCATCTCCGCCGA...CTTAAGTGGATGGCTAGTATAAAAGTTGATGGCCATAATATCTCTTAACACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | TTAATGTTTGTCTCCTGGAAGATTCCAGATCTTGTCAAGCTGGCCATCAGTATCAGGGCTTTGACCTTCTaGCCATTTGCTGCTGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: LMFVSWKIPDLVKLAISIRALTF*PFAAVK Trigger: CTTAACAGCAGCAAATGGCAAGAAGGTCAAAGCCCT...GATACTGATGGCCAGCTTGACAAGATCTGGAATCTTCCAGGAGACAAACATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235263.2 |
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| CDS-3UTR CAA 90 bp | AGCTTACAGGCAGCAGCGTTATTAACCAAAATTGCGAGTATTTTCCCTTTCAAAGCCGGGCGTTTGATCTaGAACTGTTCGATAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: SLQAAALLTKIASIFPFKAGRLI*NCSIKS Trigger: GGATTTTATCGAACAGTTCAAGATCAAACGCCCGGC...TTTGAAAGGGAAAATACTCGCAATTTTGGTTAATAACGCTGCTGCCTGTAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS-3UTR CAA 90 bp | GGTTTGATGGAGACATTTCATGGAATAGAACCTCCTTTAATATTTCCTTATGGTGTGATGTTCAGGGGATaGGTTCGATCTGGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLMETFHGIEPPLIFPYGVMFRG*VRSGAA Trigger: TGCTGCACCAGATCGAACCAATCCCCTGAACATCAC...ACCATAAGGAAATATTAAAGGAGGTTCTATTCCATGAAATGTCTCCATCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS TCA 72 bp | CTCTGCGGGCGGGAACCGCTGTGCCGCCGCTCCCCGTaGGATCCAAGCGGAGCGTGCCACACTTTTTCACCC | + |
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Preference number: 6 (lower is better) Translates to: LCGREPLCRRSP*DPSGACHTFSP Trigger: GGGTGAAAAAGTGTGGCACGCTCCGCTTGGATCTCACGGGGAGCGGCGGCACAGCGGTTCCCGCCCGCAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CCA 72 bp | GCCTTGATCTCAGTGTCCCCGAACTGCATGATGGTCTaGATCTCTCTGCGGGCGGGAACCGCTGTGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: ALISVSPNCMMV*ISLRAGTAVPP Trigger: CGGCGGCACAGCGGTTCCCGCCCGCAGAGAGATCCAGACCATCATGCAGTTCGGGGACACTGAGATCAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | TCGACGGCCGTGGCCTTGATCTCAGTGTCCCCGAACTaGATGATGGTCTGGATCTCTCTGCGGGCGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: STAVALISVSPN*MMVWISLRAGT Trigger: GGTTCCCGCCCGCAGAGAGATCCAGACCATCATGCAGTTCGGGGACACTGAGATCAAGGCCACGGCCGTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 90 bp | CCCGCTCCTACTGTGTCACTGGCACTGTACCCATTGACCACCGCCTaGCTGCTGAGCTCAATCATCTGGTGCAGCCGAAGCTTCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PAPTVSLALYPLTTA*LLSSIIWCSRSFRQ Trigger: CTGCCGGAAGCTTCGGCTGCACCAGATGATTGAGCTCAGCAGCAAGGCGGTGGTCAATGGGTACAGTGCCAGTGACACAGTAGGAGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 90 bp | GCCTGTGCAAACCCCGCTCCTACTGTGTCACTGGCACTGTACCCATaGACCACCGCCTTGCTGCTGAGCTCAATCATCTGGTGCAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ACANPAPTVSLALYP*TTALLLSSIIWCSR Trigger: TCGGCTGCACCAGATGATTGAGCTCAGCAGCAAGGCGGTGGTCAATGGGTACAGTGCCAGTGACACAGTAGGAGCGGGGTTTGCACAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 72 bp | TCCACTCCCAGGGATCCGTACGGTCCACCTGTTGCTTaGTACAGCTCCTTGAGGTGCCCCTCTGGTAACCGT | + |
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Preference number: 6 (lower is better) Translates to: STPRDPYGPPVA*YSSLRCPSGNR Trigger: ACGGTTACCAGAGGGGCACCTCAAGGAGCTGTACAAAGCAACAGGTGGACCGTACGGATCCCTGGGAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 72 bp | AACCCCGCTCCTACTGTGTCACTGGCACTGTACCCATaGACCACCGCCTTGCTGCTGAGCTCAATCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: NPAPTVSLALYP*TTALLLSSIIW Trigger: CCAGATGATTGAGCTCAGCAGCAAGGCGGTGGTCAATGGGTACAGTGCCAGTGACACAGTAGGAGCGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 72 bp | GTGAGGCCCACATCCTGCGGGATGATGATCCTGCATTaGTCGCCAAAAGCGGTCTGCACTGCCTGCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VRPTSCGMMILH*SPKAVCTACCK Trigger: TTTGCAGCAGGCAGTGCAGACCGCTTTTGGCGACAAATGCAGGATCATCATCCCGCAGGATGTGGGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066285.6 ENSMUST00000238055.2 |
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| CDS TCA 72 bp | ATCCGTACGGTCCACCTGTTGCTTTGTACAGCTCCTTaGGGTGCCCCTCTGGTAACCGTATCTGATGGACGG | + |
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Preference number: 6 (lower is better) Translates to: IRTVHLLLCTAP*GAPLVTVSDGR Trigger: CCGTCCATCAGATACGGTTACCAGAGGGGCACCTCAAGGAGCTGTACAAAGCAACAGGTGGACCGTACGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | CTGGTAACCGTATCTGATGGACGGTCAGGTCTACTGTaGCTCCGCCACTGTCAACAACCACGTACTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LVTVSDGRSGLL*LRHCQQPRTCP Trigger: GGGACAAGTACGTGGTTGTTGACAGTGGCGGAGGCACAGTAGACCTGACCGTCCATCAGATACGGTTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | CCCACCTGGAGTCACACTTCAGCTTGCTCTTTCCTTTaGAGCCACAGAACCCGTACATGCCGACACTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PTWSHTSACSFL*SHRTRTCRHSP Trigger: TGGAGAGTGTCGGCATGTACGGGTTCTGTGGCTGCAAAGGAAAGAGCAAGCTGAAGTGTGACTCCAGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237297.2 |
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| CDS CAA 72 bp | ACACTCTTTGAGGTGGTTATGTCGACGGCCGTGGCCTaGATCTCAGTGTCCCCGAACTGCATGATGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TLFEVVMSTAVA*ISVSPNCMMVW Trigger: CCAGACCATCATGCAGTTCGGGGACACTGAGATCAAGGCCACGGCCGTCGACATAACCACCTCAAAGAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 72 bp | TCCCACCTGGAGTCACACTTCAGCTTGCTCTTTCCTTaGCAGCCACAGAACCCGTACATGCCGACACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SHLESHFSLLFP*QPQNPYMPTLS Trigger: GGAGAGTGTCGGCATGTACGGGTTCTGTGGCTGCAAAGGAAAGAGCAAGCTGAAGTGTGACTCCAGGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237297.2 |
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| CDS CAA 90 bp | CCCACTTTGACACTCTTTGAGGTGGTTATGTCGACGGCCGTGGCCTaGATCTCAGTGTCCCCGAACTGCATGATGGTCTGGATCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PTLTLFEVVMSTAVA*ISVSPNCMMVWISL Trigger: CAGAGAGATCCAGACCATCATGCAGTTCGGGGACACTGAGATCAAGGCCACGGCCGTCGACATAACCACCTCAAAGAGTGTCAAAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS TCA 72 bp | AGAAAGAGGAACTTGACCGTGGATACCTCTGGCTTCTaGAACAGGTCCCGGAGGTGCTCGATGATGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RKRNLTVDTSGF*NRSRRCSMMLS Trigger: CGACAGCATCATCGAGCACCTCCGGGACCTGTTTCAGAAGCCAGAGGTATCCACGGTCAAGTTCCTCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066285.6 ENSMUST00000238055.2 |
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| CDS CCA 72 bp | ACCCACCAGAAAGAGGAACTTGACCGTGGATACCTCTaGCTTCTGAAACAGGTCCCGGAGGTGCTCGATGAT | + |
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Preference number: 6 (lower is better) Translates to: THQKEELDRGYL*LLKQVPEVLDD Trigger: ATCATCGAGCACCTCCGGGACCTGTTTCAGAAGCCAGAGGTATCCACGGTCAAGTTCCTCTTTCTGGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066285.6 ENSMUST00000238055.2 |
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| CDS CAA 90 bp | AAGTCTGTGTCCATGGTGAGGTCCCCTGTGGTGTGGAGTTTCATCTaGAACTTCTCCAAGTACAGCCATTGCTTGGCCTCACTGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: KSVSMVRSPVVWSFI*NFSKYSHCLASLGS Trigger: GGACCCCAGTGAGGCCAAGCAATGGCTGTACTTGGAGAAGTTCAAGATGAAACTCCACACCACAGGGGACCTCACCATGGACACAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066285.6 ENSMUST00000235263.2 ENSMUST00000237297.2 |
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| CDS TCA 72 bp | TGTCCCCTTCCTCCAGCTCAGACCAGATTTCTCCTATaGCATTCTCCACCAAAAAGGTCCGACTCTGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: CPLPPAQTRFLL*HSPPKRSDSAG Trigger: ACCGGCAGAGTCGGACCTTTTTGGTGGAGAATGTCATAGGAGAAATCTGGTCTGAGCTGGAGGAAGGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | GGACCACTTCACAAAGTCCACATTGCTCTTCCTCAATaGATGCTCCACGCTGTGGCCCCGGAACTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: GPLHKVHIALPQ*MLHAVAPELLV Trigger: TACAAGAAGTTCCGGGGCCACAGCGTGGAGCATGCATTGAGGAAGAGCAATGTGGACTTTGTGAAGTGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | CTGCTGCTATTTCCCACCTGGAGTCACACTTCAGCTTaGTCTTTCCTTTGCAGCCACAGAACCCGTACATGC | + |
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Preference number: 6 (lower is better) Translates to: LLLFPTWSHTSA*SFLCSHRTRTC Trigger: GCATGTACGGGTTCTGTGGCTGCAAAGGAAAGAGCAAGCTGAAGTGTGACTCCAGGTGGGAAATAGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237297.2 |
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| CDS CCA 72 bp | GAGATCCAAGCGGAGCGTGCCACACTTTTTCACCCCTaGGTCAGTGATGAAGCTGACGTTATCATGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: EIQAERATLFHP*VSDEADVIMLR Trigger: TCTGAGCATGATAACGTCAGCTTCATCACTGACCCAGGGGTGAAAAAGTGTGGCACGCTCCGCTTGGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | TCAGGGGATTGGTTCGATCTGGTGCAGCAGCTCTTTTaGGAGACTCAAAGGCAATCATTAGGTCAACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGDWFDLVQQLF*ETQRQSLGQPR Trigger: CCTGGGTTGACCTAATGATTGCCTTTGAGTCTCGCAAAAGAGCTGCTGCACCAGATCGAACCAATCCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | GGGCAGAGTGATGTTCAGGGGATTGGTTCGATCTGGTaGAGCAGCTCTTTTGCGAGACTCAAAGGCAATCAT | + |
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Preference number: 6 (lower is better) Translates to: GQSDVQGIGSIW*SSSFARLKGNH Trigger: ATGATTGCCTTTGAGTCTCGCAAAAGAGCTGCTGCACCAGATCGAACCAATCCCCTGAACATCACTCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS GCA 72 bp | ATATGTAGATGTGGGGGCTGTTTCTGCTGCTGCTGCTaGTATTTCCCACCTGGAGTCACACTTCAGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ICRCGGCFCCCC*YFPPGVTLQLA Trigger: AGCAAGCTGAAGTGTGACTCCAGGTGGGAAATAGCAGCAGCAGCAGCAGAAACAGCCCCCACATCTACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237297.2 |
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| CDS CCA 72 bp | GAAGGGCAGAGTGATGTTCAGGGGATTGGTTCGATCTaGTGCAGCAGCTCTTTTGCGAGACTCAAAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: EGQSDVQGIGSI*CSSSFARLKGN Trigger: ATTGCCTTTGAGTCTCGCAAAAGAGCTGCTGCACCAGATCGAACCAATCCCCTGAACATCACTCTGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS TCA 72 bp | AGTACTGCAGGGCGTAAGCGAAGATCTCGAGGGCTTTaGCCTTCTTGCCATTTGCTGCTGTTAAGTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: STAGRKRRSRGL*PSCHLLLLSLC Trigger: ACACAGACTTAACAGCAGCAAATGGCAAGAAGGTCAAAGCCCTCGAGATCTTCGCTTACGCCCTGCAGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066285.6 ENSMUST00000235263.2 ENSMUST00000237297.2 |
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| CDS GCA 72 bp | TCTCCTATGACATTCTCCACCAAAAAGGTCCGACTCTaGCGGTTACGTCGAACATGTTCCTTAGCCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SPMTFSTKKVRL*RLRRTCSLACA Trigger: TGCACAGGCTAAGGAACATGTTCGACGTAACCGGCAGAGTCGGACCTTTTTGGTGGAGAATGTCATAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 72 bp | TTCAGGGGATTGGTTCGATCTGGTGCAGCAGCTCTTTaGCGAGACTCAAAGGCAATCATTAGGTCAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: FRGLVRSGAAAL*RDSKAIIRSTQ Trigger: CTGGGTTGACCTAATGATTGCCTTTGAGTCTCGCAAAAGAGCTGCTGCACCAGATCGAACCAATCCCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 90 bp | TCAAAGGCAATCATTAGGTCAACCCAGGCTGCCGGGCGTTTGATCTaGAACTGTTCGATAAAATCCTCTCCAAATATTTTACAAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SKAIIRSTQAAGRLI*NCSIKSSPNILQRS Trigger: ACTCCTTTGTAAAATATTTGGAGAGGATTTTATCGAACAGTTCAAGATCAAACGCCCGGCAGCCTGGGTTGACCTAATGATTGCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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| CDS CAA 72 bp | ATCATTAGGTCAACCCAGGCTGCCGGGCGTTTGATCTaGAACTGTTCGATAAAATCCTCTCCAAATATTTTA | + |
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Preference number: 6 (lower is better) Translates to: IIRSTQAAGRLI*NCSIKSSPNIL Trigger: TAAAATATTTGGAGAGGATTTTATCGAACAGTTCAAGATCAAACGCCCGGCAGCCTGGGTTGACCTAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066285.6 |
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