Pregenerated sensors for HSH2D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062007Ensembl transcript IDs: ENSMUST00000072097.14, ENSMUST00000165324.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTTCAGATACTCCAGAAGATGGCATTGGATCCCACCATGTGGTTaGTGGGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VFRYSRRWHWIPPCG*WELNSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR TCA 90 bp | GCTGAAAGTGAGATATGGATCCCAAGAATATGGAGGGATAACACATaGTACAGGCCTGGAACGTGTTGGACCCACCAAGTCCCTGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: AESEIWIPRIWRDNT*YRPGTCWTHQVPAA Trigger: TGCAGCAGGGACTTGGTGGGTCCAACACGTTCCAGGCCTGTATCATGTGTTATCCCTCCATATTCTTGGGATCCATATCTCACTTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR CCA 90 bp | AGTTGTCTTCAGATACTCCAGAAGATGGCATTGGATCCCACCATGTaGTTGCTGGGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: SCLQILQKMALDPTM*LLGIELRTPGRAVS Trigger: ACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGACAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR CCA 90 bp | TATGAGTACACTGTAGTTGTCTTCAGATACTCCAGAAGATGGCATTaGATCCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCCCTG | + |
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Preference number: 1 (lower is better) Translates to: YEYTVVVFRYSRRWH*IPPCGCWELNSGPL Trigger: CAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGACAACTACAGTGTACTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR GCA 90 bp | GTAATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTaGAGGATTCAGCCCCTTAACCTCTTCAGCACAGTTCTCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VILLLLGQSAPLAGT*RIQPLNLFSTVLWL Trigger: CAGCCAGAGAACTGTGCTGAAGAGGTTAAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| 3UTR CCA 90 bp | TATATATATGAGTACACTGTAGTTGTCTTCAGATACTCCAGAAGATaGCATTGGATCCCACCATGTGGTTGCTGGGAATTGAACTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: YIYEYTVVVFRYSRR*HWIPPCGCWELNSG Trigger: TCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGACAACTACAGTGTACTCATATATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR-3UTR TCA 90 bp | CATGTATGTGGAAGTCTGAGGACATCCTCCAGAAGTTGGTCCACAGTTCTCACCACAGTTCTCTGGCTGTaGGGACAAGGATGGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: HVCGSLRTSSRSWSTVLTTVLWL*GQGWGP Trigger: AGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGT...GGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTTCCACATACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR CAA 90 bp | TGTCTTCAGATACTCCAGAAGATGGCATTGGATCCCACCATGTGGTaGCTGGGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CLQILQKMALDPTMW*LGIELRTPGRAVSA Trigger: AGCACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR-3UTR TCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTACAGTTCTCTGGCTGTaGGGACAAGGATGGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLTVLWL*GQGWGP Trigger: AGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGT...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| 3UTR-3UTR TCA 90 bp | CTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCGACCTAAAGGAGAGATaGGGAATACCCAAGATACAG | + |
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Preference number: 2 (lower is better) Translates to: LLLLGQSAPLAGTCRIQPDLKER*GIPKIQ Trigger: CTGTATCTTGGGTATTCCTCATCTCTCCTTTAGGTC...GGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGAACGTGTTGGACCCACCAAGTCCCTGCTGCAATCTTTTAAAATTATAACATCCTCCAGAAGTTaGTCCACAGTTCTCACCATG | + |
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Preference number: 2 (lower is better) Translates to: GLERVGPTKSLLQSFKIITSSRS*STVLTM Trigger: CATGGTGAGAACTGTGGACCAACTTCTGGAGGATGT...TATAATTTTAAAAGATTGCAGCAGGGACTTGGTGGGTCCAACACGTTCCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR-3UTR TCA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTGACCTAAAGGAGAGATaGGGAATACCCAAGATACAG | + |
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Preference number: 2 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIDLKER*GIPKIQ Trigger: CTGTATCTTGGGTATTCCTCATCTCTCCTTTAGGTC...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCATTGGATCCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCCCTGGAACCACCAAGTCCCTGCTaGAATCTTTTAAAATTATAT | + |
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Preference number: 2 (lower is better) Translates to: WHWIPPCGCWELNSGPLEPPSPC*NLLKLY Trigger: ATATAATTTTAAAAGATTGCAGCAGGGACTTGGTGG...TTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR TCA 72 bp | GATGGCATTGGATCCCACCATGTGGTTGCTGGGAATTaGACTCAGGACCCCTGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: DGIGSHHVVAGN*TQDPWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR TCA 72 bp | ACATCCTCCAGAAGTTGGTCCACAGTTCTCACCATGTaGGTCCTGGGGATAGAACTCAGTTGTCGGGCATGG | + |
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Preference number: 3 (lower is better) Translates to: TSSRSWSTVLTM*VLGIELSCRAW Trigger: CCATGCCCGACAACTGAGTTCTATCCCCAGGACTCACATGGTGAGAACTGTGGACCAACTTCTGGAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR CCA 72 bp | TCCAGAAGATGGCATTGGATCCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCCCTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SRRWHWIPPCGC*ELNSGPLEEQS Trigger: TGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR CCA 72 bp | CAGATACTCCAGAAGATGGCATTGGATCCCACCATGTaGTTGCTGGGAATTGAACTCAGGACCCCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: QILQKMALDPTM*LLGIELRTPGR Trigger: TCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR TCA 72 bp | GAGATATGGATCCCAAGAATATGGAGGGATAACACATaGTACAGGCCTGGAACGTGTTGGACCCACCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: EIWIPRIWRDNT*YRPGTCWTHQV Trigger: GACTTGGTGGGTCCAACACGTTCCAGGCCTGTATCATGTGTTATCCCTCCATATTCTTGGGATCCATATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR CCA 72 bp | ACTGTAGTTGTCTTCAGATACTCCAGAAGATGGCATTaGATCCCACCATGTGGTTGCTGGGAATTGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: TVVVFRYSRRWH*IPPCGCWELNS Trigger: TGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGACAACTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| 3UTR GCA 72 bp | ATACAGGCCTGGAACGTGTTGGACCCACCAAGTCCCTaGTGCAATCTTTTAAAATTATATCTGCTTGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: IQAWNVLDPPSP*CNLLKLYLLVS Trigger: ACTCACAAGCAGATATAATTTTAAAAGATTGCAGCAGGGACTTGGTGGGTCCAACACGTTCCAGGCCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGTGCGGGAGATGGTGCCATaGAACCACTCGGGGATCCCG | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWELNSGPLEEQSVREMVP*NHSGIP Trigger: CGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCG...CACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR TCA 90 bp | GTCCACAGTTCTCACCATGTGAGTCCTGGGGATAGAACTCAGTTGTCGGGCATGCACAGGCTCCTGGGCTaGCAGGGCCCTTACCACCTT | + |
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Preference number: 4 (lower is better) Translates to: VHSSHHVSPGDRTQLSGMHRLLG*QGPYHL Trigger: AAGGTGGTAAGGGCCCTGTCAGCCCAGGAGCCTGTG...CATGCCCGACAACTGAGTTCTATCCCCAGGACTCACATGGTGAGAACTGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR TCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGTGACCCTCTGGCTAGTCTaGGGTAGGGACCTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWELNSGPLEEQSVTLWLV*GRDLRF Trigger: GAACCTGAGGTCCCTACCTCAGACTAGCCAGAGGGT...CACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR GCA 90 bp | CCCTTAACCTCTTCAGCACAGTTCTCTGGCTGTGAGGACAAGGATGGGGACCTACCTCTCGGGAGATGGTaGCATGGAACCACTCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: PLTSSAQFSGCEDKDGDLPLGRW*HGTTRG Trigger: TCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGG...TAGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGTGCTGAAGAGGTTAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR GCA 90 bp | TCTCACCATGTGAGTCCTGGGGATAGAACTCAGTTGTCGGGCATGGCTGAAAGCTTTGCTGGATCCTCCTaGCCGCAGGCCTGGGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SHHVSPGDRTQLSGMAESFAGSS*PQAWVN Trigger: GTTGACCCAGGCCTGCGGGCAGGAGGATCCAGCAAA...GCTTTCAGCCATGCCCGACAACTGAGTTCTATCCCCAGGACTCACATGGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR CCA 90 bp | CCCTTAACCTCTTCAGCACAGTTCTCTGGCTGTGAGGACAAGGATGGGGACCTAGCTAGCAGGTCCGCCTaGGTGTGCACAAACCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLTSSAQFSGCEDKDGDLASRSA*VCTNQS Trigger: GGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGC...TAGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGTGCTGAAGAGGTTAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | TTAGCTGGCACCTGCAGGATTCAGCCCCTTAACCTCTTCAGCACAGTTCTCTGGCGAGTCACAGGGCTGTaGTGCTGCTGTGCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LAGTCRIQPLNLFSTVLWRVTGL*CCCATC Trigger: GCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCG...CCAGAGAACTGTGCTGAAGAGGTTAAGGGGCTGAATCCTGCAGGTGCCAGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | AGAAGATGGCATTGGATCCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCCAAGTCCACAGGCTCCTaGGCTGACAGGGCCCTTACC | + |
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Preference number: 4 (lower is better) Translates to: RRWHWIPPCGCWELNSGPKSTGS*ADRALT Trigger: GGTAAGGGCCCTGTCAGCCCAGGAGCCTGTGGACTT...GGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR GCA 90 bp | AGAAGATGGCATTGGATCCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCCAAGGTGACCAGGGCATaGAGAGAGGCGTGGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: RRWHWIPPCGCWELNSGPKVTRA*REAWVM Trigger: CATGACCCACGCCTCTCTGCATGCCCTGGTCACCTT...GGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR GCA 90 bp | AAGTCTGAGGACATCCTCCAGAAGTTGGTCCACAGTTCTCACCATGTGAGTCCTGTCACAGGGCTGTGGTaGTGCTGTGCCACTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KSEDILQKLVHSSHHVSPVTGLW*CCATCL Trigger: CAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGAC...AGGACTCACATGGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR GCA 90 bp | CCCTTAACCTCTTCAGCACAGTTCTCTGGCTGTGAGGACAAGGATGGGGACCTACAGGGCCTGGGGTTCTaGAGGGTTTTGAAGAGACGT | + |
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Preference number: 4 (lower is better) Translates to: PLTSSAQFSGCEDKDGDLQGLGF*RVLKRR Trigger: ACGTCTCTTCAAAACCCTGCAGAACCCCAGGCCCTG...TAGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGTGCTGAAGAGGTTAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | CATGTATGTGGAAGTCTGAGGACATCCTCCAGAAGTTGGTCCACAGTTCTCACCGCTAGCAGGTCCGCCTaGGTGTGCACAAACCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: HVCGSLRTSSRSWSTVLTASRSA*VCTNQS Trigger: GGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGC...GGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTTCCACATACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR CCA 90 bp | AAGTCTGAGGACATCCTCCAGAAGTTGGTCCACAGTTCTCACCATGTGAGTCCTCAGCCTCTCGGGAGATaGTGCCATGGAACCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: KSEDILQKLVHSSHHVSPQPLGR*CHGTTR Trigger: CCGAGTGGTTCCATGGCACCATCTCCCGAGAGGCTG...AGGACTCACATGGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR CCA 90 bp | CCCTTAACCTCTTCAGCACAGTTCTCTGGCTGTGAGGACAAGGATGGGGACCTATCAGGCAACCAGCCCTaGGCTTCTGGAAAGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PLTSSAQFSGCEDKDGDLSGNQP*ASGKST Trigger: TGTGGACTTTCCAGAAGCCCAGGGCTGGTTGCCTGA...TAGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGTGCTGAAGAGGTTAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| 3UTR CAA 72 bp | AGATGGCATTGGATCCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCCCTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: RWHWIPPCGCWE*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGGGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR TCA 90 bp | TCTCACCATGTGAGTCCTGGGGATAGAACTCAGTTGTCGGGCATGGCTGAAAGCCCAACAGGTGTGAAGTaGGTCGCTGTTTCACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SHHVSPGDRTQLSGMAESPTGVK*VAVSPS Trigger: AGAGGGTGAAACAGCGACTCACTTCACACCTGTTGG...GCTTTCAGCCATGCCCGACAACTGAGTTCTATCCCCAGGACTCACATGGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR GCA 90 bp | CTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCAGGTCCGCCTGGGTGTaGACAAACCAGTCCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LLLLGQSAPLAGTCRIQPRSAWV*TNQSSR Trigger: TCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCT...GGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR GCA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTGCTGTGGTGCTGCTGTaGCACTTGCCTGGCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIAVVLL*HLPGIP Trigger: GGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGC...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGCTGTGGTGCTGCTGTaGCACTTGCCTGGCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SFILLSTGPFHQVPKEVAAVVLL*HLPGIP Trigger: GGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGC...TGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGATAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR GCA 90 bp | AAGTCTGAGGACATCCTCCAGAAGTTGGTCCACAGTTCTCACCATGTGAGTCCTAAGAGACGTGGTGGCTaGACAGGAGTCCTCGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: KSEDILQKLVHSSHHVSPKRRGG*TGVLGV Trigger: CACTCCGAGGACTCCTGTGCAGCCACCACGTCTCTT...AGGACTCACATGGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR CCA 90 bp | TCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCTCCTGCCCGCAGGCCTaGGTCAACAGCTCCCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: SIIIRTISSLSWHLQDSASCPQA*VNSSPN Trigger: ATTCGGGGAGCTGTTGACCCAGGCCTGCGGGCAGGA...GGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | ATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTGCTGTGCCACTTGCCTaGCATCCCCCAGCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: IIIRTISSLSWHLQDSAPAVPLA*HPPAGS Trigger: TGAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGC...AGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTAAGTCCACAGGCTCCTaGGCTGACAGGGCCCTTACC | + |
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Preference number: 4 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLKSTGS*ADRALT Trigger: GGTAAGGGCCCTGTCAGCCCAGGAGCCTGTGGACTT...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR TCA 90 bp | CTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCACCCTCTGGCTAGTCTaGGGTAGGGACCTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLLLGQSAPLAGTCRIQPTLWLV*GRDLRF Trigger: GAACCTGAGGTCCCTACCTCAGACTAGCCAGAGGGT...GGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR TCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTTTCCACGCCAGGCTTTaGCCCCTGAGAATGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLFHARL*PLRMPS Trigger: GGAAGGCATTCTCAGGGGTCAAAGCCTGGCGTGGAA...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR GCA 90 bp | TCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCAGGTCCGCCTGGGTGTaGACAAACCAGTCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SIIIRTISSLSWHLQDSARSAWV*TNQSSR Trigger: TCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCT...GGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCCTCTCGGGAGATGGTaGCATGGAACCACTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIPLGRW*HGTTRG Trigger: TCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGG...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTAACCTCTTCAGCACAGTTCTCTGGCTGTGAGGACAAGGATGGGGACCTACGAATAGGCTTTTGTTaGTGGAAGGTGACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTSSAQFSGCEDKDGDLRIGFC*WKVTRA Trigger: TGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCG...TAGGTCCCCATCCTTGTCCTCACAGCCAGAGAACTGTGCTGAAGAGGTTAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | TCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCGCTGTGCCACTTGCCTaGCATCCCCCAGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIIIRTISSLSWHLQDSAAVPLA*HPPAGS Trigger: TGAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGC...GGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTAGTCCCCAGGGGTTGTaGCTCCAACATGTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLSPQGL*LQHVLS Trigger: GCTGAGAACATGTTGGAGTCACAACCCCTGGGGACT...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | ATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTAGTCCCCAGGGGTTGTaGCTCCAACATGTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIIRTISSLSWHLQDSAPSPQGL*LQHVLS Trigger: GCTGAGAACATGTTGGAGTCACAACCCCTGGGGACT...AGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTTTTGTTGGTGGAAGGTaGCCAGGGCATGCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLFVGGR*PGHAER Trigger: CCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAA...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGACAGGCCTGGAGTCCCTaGAGGTGGCTTCTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPFHQVPKEVAVILLLLGQAWSP*RWLLCL Trigger: GAGGCAGAGAAGCCACCTTCAGGGACTCCAGGCCTG...TCCTAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | GCTGAAAGCTCTTTTATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAATTCCACGCCAGGCTTTaGCCCCTGAGAATGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AESSFILLSTGPFHQVPKFHARL*PLRMPS Trigger: GGAAGGCATTCTCAGGGGTCAAAGCCTGGCGTGGAA...TTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGATAAAAGAGCTTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCACAGGCTCCTGGGCTaGCAGGGCCCTTACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLLGQSAPLAGTCRIQHRLLG*QGPYHL Trigger: AAGGTGGTAAGGGCCCTGTCAGCCCAGGAGCCTGTG...CTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR GCA 90 bp | CAGATACTCCAGAAGATGGCATTGGATCCCACCATGTGGTTGCTGGGAATTGAACAGGGCCTGGGGTTCTaGAGGGTTTTGAAGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: QILQKMALDPTMWLLGIEQGLGF*RVLKRR Trigger: ACGTCTCTTCAAAACCCTGCAGAACCCCAGGCCCTG...TTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR CCA 90 bp | GTAGCAGTAATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCCGGGAGATGGTGCCATaGAACCACTCGGGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VAVILLLLGQSAPLAGTCREMVP*NHSGIP Trigger: CGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCG...GCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAATTACTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTTCAGGCAACCAGCCCTaGGCTTCTGGAAAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLSGNQP*ASGKST Trigger: TGTGGACTTTCCAGAAGCCCAGGGCTGGTTGCCTGA...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTTTTGTTGGTGGAAGGTaGCCAGGGCATGCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIFVGGR*PGHAER Trigger: CCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAA...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTCCAACAGGTGTGAAGTaGGTCGCTGTTTCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLPTGVK*VAVSPS Trigger: AGAGGGTGAAACAGCGACTCACTTCACACCTGTTGG...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGAACGTGTTGGACCCACCAAGTCCCTGCTGCAATCTTTTAAAATTATAGGTTCTGCAGGGTTTTaGAGAGACGTGGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLERVGPTKSLLQSFKIIGSAGF*RDVVAA Trigger: TGCAGCCACCACGTCTCTTCAAAACCCTGCAGAACC...TATAATTTTAAAAGATTGCAGCAGGGACTTGGTGGGTCCAACACGTTCCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTGGTTCTGCAGGGTTTTaGAGAGACGTGGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIGSAGF*RDVVAA Trigger: TGCAGCCACCACGTCTCTTCAAAACCCTGCAGAACC...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTACAGGCCTGGAGTCCCTaGAGGTGGCTTCTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGPFHQVPKEVAVILLLLQAWSP*RWLLCL Trigger: GAGGCAGAGAAGCCACCTTCAGGGACTCCAGGCCTG...TAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAGCAGTAATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTTTGCTGGATCCTCCTaGCCGCAGGCCTGGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVAVILLLLGQSAPLAGTFAGSS*PQAWVN Trigger: GTTGACCCAGGCCTGCGGGCAGGAGGATCCAGCAAA...GGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAATTACTGCTACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | CATGTATGTGGAAGTCTGAGGACATCCTCCAGAAGTTGGTCCACAGTTCTCACCCGAATAGGCTTTTGTTaGTGGAAGGTGACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVCGSLRTSSRSWSTVLTRIGFC*WKVTRA Trigger: TGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCG...GGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTTCCACATACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR CCA 90 bp | ATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTAGAAGCCTCCTCAGGTaGGCAGGAAGACCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IIIRTISSLSWHLQDSAPRSLLR*AGRPLN Trigger: GTTCAAAGGTCTTCCTGCCCACCTGAGGAGGCTTCT...AGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| 3UTR CAA 72 bp | ACATGTATGTGGAAGTCTGAGGACATCCTCCAGAAGTaGGTCCACAGTTCTCACCATGTGAGTCCTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCMWKSEDILQK*VHSSHHVSPGD Trigger: ATCCCCAGGACTCACATGGTGAGAACTGTGGACCAACTTCTGGAGGATGTCCTCAGACTTCCACATACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR GCA 90 bp | AGAGGTAGCAGTAATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACGTCACAGGGCTGTGGTaGTGCTGTGCCACTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGSSNSIIIRTISSLSWHVTGLW*CCATCL Trigger: CAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGAC...GTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAATTACTGCTACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGACAATCAGCTTCCTGCCCGCAGGCCTaGGTCAACAGCTCCCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQVPKEVAVILLLLGQSASCPQA*VNSSPN Trigger: ATTCGGGGAGCTGTTGACCCAGGCCTGCGGGCAGGA...AGCTGATTGTCCTAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTAGAAGCCTCCTCAGGTaGGCAGGAAGACCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIRSLLR*AGRPLN Trigger: GTTCAAAGGTCTTCCTGCCCACCTGAGGAGGCTTCT...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTACGAGTCACAGGGCTGTaGTGCTGCTGTGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGPFHQVPKEVAVILLLLRVTGL*CCCATC Trigger: GCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCG...TAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | TCTTTTATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGGCGAAAGGTGGTGGTaGAAGGTATTCCTCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFILLSTGPFHQVPKEVAGERWW*KVFLRQ Trigger: TTGCCTGAGGAATACCTTCCACCACCACCTTTCGCC...TGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGATAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CCA 90 bp | TCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCGGCGAAAGGTGGTGGTaGAAGGTATTCCTCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIIIRTISSLSWHLQDSAGERWW*KVFLRQ Trigger: TTGCCTGAGGAATACCTTCCACCACCACCTTTCGCC...GGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAAAGAGACGTGGTGGCTaGACAGGAGTCCTCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPFHQVPKEVAVILLLLKRRGG*TGVLGV Trigger: CACTCCGAGGACTCCTGTGCAGCCACCACGTCTCTT...TAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGAAGGGGCGAAAGGTGGTaGTGGAAGGTATTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPFHQVPKEVAVILLLLGRGERW*WKVFLR Trigger: CCTGAGGAATACCTTCCACCACCACCTTTCGCCCCT...TCCTAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| 3UTR CAA 72 bp | CACTGTAGTTGTCTTCAGATACTCCAGAAGATGGCATaGGATCCCACCATGTGGTTGCTGGGAATTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQILQKMA*DPTMWLLGIEL Trigger: GAGTTCAATTCCCAGCAACCACATGGTGGGATCCAATGCCATCTTCTGGAGTATCTGAAGACAACTACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
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| CDS-3UTR CCA 90 bp | ATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTTTAGTTGTTGTGGATaGCTTCCTTTCAGAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IIIRTISSLSWHLQDSAPFSCCG*LPFRSL Trigger: GAGGCTTCTGAAAGGAAGCCATCCACAACAACTAAA...AGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | CTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCTTTAGTTGTTGTGGATaGCTTCCTTTCAGAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLGQSAPLAGTCRIQPFSCCG*LPFRSL Trigger: GAGGCTTCTGAAAGGAAGCCATCCACAACAACTAAA...GGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGGCTGAAAGTGAGATATGGATCCCAAGAATATGGAGGGATAACACATGATGGTTTTGAAGAGACGTaGTGGCTGCACAGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MWLKVRYGSQEYGGITHDGFEET*WLHRSP Trigger: AGGACTCCTGTGCAGCCACCACGTCTCTTCAAAACC...ATCATGTGTTATCCCTCCATATTCTTGGGATCCATATCTCACTTTCAGCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR CCA 90 bp | ACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGTTTTGAAGAGACGTaGTGGCTGCACAGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGPFHQVPKEVAVILLLLGFEET*WLHRSP Trigger: AGGACTCCTGTGCAGCCACCACGTCTCTTCAAAACC...TAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGACAATCAGCTAGGGGCGAAAGGTGGTaGTGGAAGGTATTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HQVPKEVAVILLLLGQSARGERW*WKVFLR Trigger: CCTGAGGAATACCTTCCACCACCACCTTTCGCCCCT...AGCTGATTGTCCTAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| 3UTR CAA 72 bp | TTTTTATTCCTGGAGCAAAGGACAGAACCCAGGACCTaGTGTTTACTAGGCAAGTGCTCTACCACTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLFLEQRTEPRT*CLLGKCSTTEL Trigger: TAGCTCAGTGGTAGAGCACTTGCCTAGTAAACACAAGGTCCTGGGTTCTGTCCTTTGCTCCAGGAATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR TCA 90 bp | GTAGCAGTAATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCTGGCTTTCAGCATCCTaGACCAGGGCATTTGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VAVILLLLGQSAPLAGTCWLSAS*TRAFEY Trigger: ATACTCAAATGCCCTGGTTCAGGATGCTGAAAGCCA...GCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAATTACTGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 90 bp | AACCACTCGGGGATCCCGGATTGGGCTAGCAGGTCCGCCTGGGTGTaGACAAACCAGTCCAGCCGAGGAGGTAGTGGTGGGGGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NHSGIPDWASRSAWV*TNQSSRGGSGGGSL Trigger: GAGGCTGCCCCCACCACTACCTCCTCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGCCCAATCCGGGATCCCCGAGTGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | CCATGGAACCACTCGGGGATCCCGGATTGGGCTAGCAGGTCCGCCTaGGTGTGCACAAACCAGTCCAGCCGAGGAGGTAGTGGTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PWNHSGIPDWASRSA*VCTNQSSRGGSGGG Trigger: GCCCCCACCACTACCTCCTCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGCCCAATCCGGGATCCCCGAGTGGTTCCATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | GCCTCTCGGGAGATGGTGCCATGGAACCACTCGGGGATCCCGGATTaGGCTAGCAGGTCCGCCTGGGTGTGCACAAACCAGTCCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASREMVPWNHSGIPD*ASRSAWVCTNQSSR Trigger: TCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGCCCAATCCGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 90 bp | GGGGTTGTGACTCCAACATGTTCTCAGCAGCCTCTCGGGAGATGGTaGCATGGAACCACTCGGGGATCCCGGATTGGGCTAGCAGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GVVTPTCSQQPLGRW*HGTTRGSRIGLAGP Trigger: CGGACCTGCTAGCCCAATCCGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGGCTGCTGAGAACATGTTGGAGTCACAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | TGTGACTCCAACATGTTCTCAGCAGCCTCTCGGGAGATGGTGCCATaGAACCACTCGGGGATCCCGGATTGGGCTAGCAGGTCCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CDSNMFSAASREMVP*NHSGIPDWASRSAW Trigger: CCAGGCGGACCTGCTAGCCCAATCCGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGGCTGCTGAGAACATGTTGGAGTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | TGCTGGATCCTCCTGCCCGCAGGCCTGGGTCAACAGCTCCCCGAATaGCCGAATAGGCTTTTGTTGGTGGAAGGTGACCAGGGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWILLPAGLGQQLPE*PNRLLLVEGDQGMQ Trigger: CTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACCCAGGCCTGCGGGCAGGAGGATCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 90 bp | ACTGTCCCAACTGAATGCTCGAGTCACAGGGCTGTGGTGCTGCTGTaGCACTTGCCTGGCATCCCCCAGCAGGTTCATGGCCAACAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVPTECSSHRAVVLL*HLPGIPQQVHGQQV Trigger: CACCTGTTGGCCATGAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCGAGCATTCAGTTGGGACAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | CCAGGGGTTGTGACTCCAACATGTTCTCAGCAGCCTCTCGGGAGATaGTGCCATGGAACCACTCGGGGATCCCGGATTGGGCTAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGVVTPTCSQQPLGR*CHGTTRGSRIGLAG Trigger: ACCTGCTAGCCCAATCCGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGGCTGCTGAGAACATGTTGGAGTCACAACCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | GCCTGGGTCAACAGCTCCCCGAATGGCCGAATAGGCTTTTGTTGGTaGAAGGTGACCAGGGCATGCAGAGAGGCGTGGGTCATGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWVNSSPNGRIGFCW*KVTRACREAWVMWS Trigger: GGACCACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | CAGGCCTGGGTCAACAGCTCCCCGAATGGCCGAATAGGCTTTTGTTaGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTGGGTCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAWVNSSPNGRIGFC*WKVTRACREAWVMW Trigger: CCACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACCCAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 90 bp | CCGAATGGCCGAATAGGCTTTTGTTGGTGGAAGGTGACCAGGGCATaGAGAGAGGCGTGGGTCATGTGGTCCCCAGCGAAGGCACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PNGRIGFCWWKVTRA*REAWVMWSPAKAQV Trigger: GACTTGTGCCTTCGCTGGGGACCACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 90 bp | CAACTGAATGCTCGAGTCACAGGGCTGTGGTGCTGCTGTGCCACTTaGCTGGCATCCCCCAGCAGGTTCATGGCCAACAGGTGTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLNARVTGLWCCCAT*LASPSRFMANRCEV Trigger: CACTTCACACCTGTTGGCCATGAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCGAGCATTCAGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | TGTTGGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTGGGTCATGTaGTCCCCAGCGAAGGCACAAGTCCCATCTTCTGAAAGTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: CWWKVTRACREAWVM*SPAKAQVPSSESFT Trigger: GGTGAAACTTTCAGAAGATGGGACTTGTGCCTTCGCTGGGGACCACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 90 bp | ATAGGCTTTTGTTGGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTaGGTCATGTGGTCCCCAGCGAAGGCACAAGTCCCATCTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IGFCWWKVTRACREA*VMWSPAKAQVPSSE Trigger: TTCAGAAGATGGGACTTGTGCCTTCGCTGGGGACCACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS TCA 90 bp | GGCGTGGGTCATGTGGTCCCCAGCGAAGGCACAAGTCCCATCTTCTaGAAGTTTCACCATGAAGTGACGGCAGCAAGTCTGGGCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVGHVVPSEGTSPIF*KFHHEVTAASLGFV Trigger: TACAAAGCCCAGACTTGCTGCCGTCACTTCATGGTGAAACTTTCAGAAGATGGGACTTGTGCCTTCGCTGGGGACCACATGACCCACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGGAACGTGTTGGACCCACCAAGTCCCTGCTGCAATCTTTTAAAATTATAGTGCTGCTGTGCCACTaGCCTGGCATCCCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLERVGPTKSLLQSFKIIVLLCH*PGIPQQ Trigger: CTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCAC...TATAATTTTAAAAGATTGCAGCAGGGACTTGGTGGGTCCAACACGTTCCAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR CAA 90 bp | GGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGAGTGCTGCTGTGCCACTaGCCTGGCATCCCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPFHQVPKEVAVILLLLGVLLCH*PGIPQQ Trigger: CTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCAC...TCCTAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CAA 90 bp | TTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCCCTTCCGAATAGGCTTTTGTaGGTGGAAGGTGACCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLGQSAPLAGTCRIQPLPNRLL*VEGDQG Trigger: GCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGG...AAGGGGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CAA 90 bp | TCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCTGGCCGAATAGGCTTTaGTTGGTGGAAGGTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIIIRTISSLSWHLQDSAWPNRL*LVEGDQ Trigger: CTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCA...GGCTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACCTGCAGGATTCAGCCGAATAGGCTTTTGTaGGTGGAAGGTGACCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLLGQSAPLAGTCRIQPNRLL*VEGDQG Trigger: GCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGG...CTGAATCCTGCAGGTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGGCTGAAAGTGAGATATGGATCCCAAGAATATGGAGGGATAACACATGATGGGTTCTGCAGGGTTTaGAAGAGACGTGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MWLKVRYGSQEYGGITHDGFCRV*KRRGGC Trigger: GCAGCCACCACGTCTCTTCAAAACCCTGCAGAACCC...ATCATGTGTTATCCCTCCATATTCTTGGGATCCATATCTCACTTTCAGCCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072097.14 |
||
| CDS-3UTR CAA 90 bp | ACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCTATTATTATTAGGGTTCTGCAGGGTTTaGAAGAGACGTGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGPFHQVPKEVAVILLLLGFCRV*KRRGGC Trigger: GCAGCCACCACGTCTCTTCAAAACCCTGCAGAACCC...TAATAATAATAGAATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTATCCACTGGGCCATTCCACCAGGTCCCTAAAGAGGTAGCAGTAATTCCTGAACCAGGGCATTaGAGTATAGGAAGAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLSTGPFHQVPKEVAVIPEPGH*SIGRDP Trigger: AGGATCTCTTCCTATACTCAAATGCCCTGGTTCAGG...AATTACTGCTACCTCTTTAGGGACCTGGTGGAATGGCCCAGTGGATAAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTAGCAGTAATTCTATTATTATTAGGACAATCAGCTCCCTTAGCTGGCACTGGCCGAATAGGCTTTaGTTGGTGGAAGGTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGSSNSIIIRTISSLSWHWPNRL*LVEGDQ Trigger: CTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCA...GTGCCAGCTAAGGGAGCTGATTGTCCTAATAATAATAGAATTACTGCTACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 72 bp | GGGATCCCGGATTGGGCTAGCAGGTCCGCCTGGGTGTaGACAAACCAGTCCAGCCGAGGAGGTAGTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GIPDWASRSAWV*TNQSSRGGSGG Trigger: CCCACCACTACCTCCTCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGCCCAATCCGGGATCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 72 bp | CACTCGGGGATCCCGGATTGGGCTAGCAGGTCCGCCTaGGTGTGCACAAACCAGTCCAGCCGAGGAGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSGIPDWASRSA*VCTNQSSRGGS Trigger: ACTACCTCCTCGGCTGGACTGGTTTGTGCACACCCAGGCGGACCTGCTAGCCCAATCCGGGATCCCCGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS TCA 72 bp | AGAATGCCTTCCTCCAGCTGGCAGGCCTGGAGTCCCTaGAGGTGGCTTCTCTGCCTCTCAGGGCCTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RMPSSSWQAWSP*RWLLCLSGPGV Trigger: AACCCCAGGCCCTGAGAGGCAGAGAAGCCACCTTCAGGGACTCCAGGCCTGCCAGCTGGAGGAAGGCATTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS TCA 72 bp | GGCCCTTACCACCTTTCCACGCCAGGCTTTGACCCCTaGGAATGCCTTCCTCCAGCTGGCAGGCCTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPYHLSTPGFDP*ECLPPAGRPGV Trigger: GACTCCAGGCCTGCCAGCTGGAGGAAGGCATTCTCAGGGGTCAAAGCCTGGCGTGGAAAGGTGGTAAGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS TCA 72 bp | CTGACAGGGCCCTTACCACCTTTCCACGCCAGGCTTTaGCCCCTGAGAATGCCTTCCTCCAGCTGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTGPLPPFHARL*PLRMPSSSWQA Trigger: GGCCTGCCAGCTGGAGGAAGGCATTCTCAGGGGTCAAAGCCTGGCGTGGAAAGGTGGTAAGGGCCCTGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS GCA 72 bp | CTGTCCCAACTGAATGCTCGAGTCACAGGGCTGTGGTaGTGCTGTGCCACTTGCCTGGCATCCCCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSQLNARVTGLW*CCATCLASPSR Trigger: CCTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCGAGCATTCAGTTGGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CCA 72 bp | GAGTCACAGGGCTGTGGTGCTGCTGTGCCACTTGCCTaGCATCCCCCAGCAGGTTCATGGCCAACAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ESQGCGAAVPLA*HPPAGSWPTGV Trigger: CACACCTGTTGGCCATGAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CCA 72 bp | AACCAGCCCTGGGCTTCTGGAAAGTCCACAGGCTCCTaGGCTGACAGGGCCCTTACCACCTTTCCACGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NQPWASGKSTGS*ADRALTTFPRQ Trigger: CTGGCGTGGAAAGGTGGTAAGGGCCCTGTCAGCCCAGGAGCCTGTGGACTTTCCAGAAGCCCAGGGCTGGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 72 bp | GCTGACAGGGCCCTTACCACCTTTCCACGCCAGGCTTaGACCCCTGAGAATGCCTTCCTCCAGCTGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADRALTTFPRQA*TPENAFLQLAG Trigger: GCCTGCCAGCTGGAGGAAGGCATTCTCAGGGGTCAAAGCCTGGCGTGGAAAGGTGGTAAGGGCCCTGTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 90 bp | CCCGCAGGCCTGGGTCAACAGCTCCCCGAATGGCCGAATAGGCTTTaGTTGGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTGGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAGLGQQLPEWPNRL*LVEGDQGMQRGVGH Trigger: ATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACCCAGGCCTGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS TCA 72 bp | TCTCTGCCTCTCAGGGCCTGGGGTTCTGCAGGGTTTTaGAGAGACGTGGTGGCTGCACAGGAGTCCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPLRAWGSAGF*RDVVAAQESSE Trigger: CTCCGAGGACTCCTGTGCAGCCACCACGTCTCTTCAAAACCCTGCAGAACCCCAGGCCCTGAGAGGCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS GCA 72 bp | ACTGAATGCTCGAGTCACAGGGCTGTGGTGCTGCTGTaGCACTTGCCTGGCATCCCCCAGCAGGTTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: TECSSHRAVVLL*HLPGIPQQVHG Trigger: GCCATGAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCGAGCATTCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS GCA 72 bp | TCCCAACTGAATGCTCGAGTCACAGGGCTGTGGTGCTaGTGTGCCACTTGCCTGGCATCCCCCAGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQLNARVTGLWC*CATCLASPSRF Trigger: GAACCTGCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCGAGCATTCAGTTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CCA 72 bp | TGTTGGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTaGGTCATGTGGTCCCCAGCGAAGGCACAAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CWWKVTRACREA*VMWSPAKAQVP Trigger: TGGGACTTGTGCCTTCGCTGGGGACCACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CCA 72 bp | GTACTGTCCCAACTGAATGCTCGAGTCACAGGGCTGTaGTGCTGCTGTGCCACTTGCCTGGCATCCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLSQLNARVTGL*CCCATCLASPS Trigger: GCTGGGGGATGCCAGGCAAGTGGCACAGCAGCACCACAGCCCTGTGACTCGAGCATTCAGTTGGGACAGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 90 bp | GCAGGCCTGGGTCAACAGCTCCCCGAATGGCCGAATAGGCTTTTGTaGGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTGGGTCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: AGLGQQLPEWPNRLL*VEGDQGMQRGVGHV Trigger: CACATGACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACCCAGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 90 bp | GAAGGTGGCTTCTCTGCCTCTCAGGGCCTGGGGTTCTGCAGGGTTTaGAAGAGACGTGGTGGCTGCACAGGAGTCCTCGGAGTGGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGGFSASQGLGFCRV*KRRGGCTGVLGVAS Trigger: ACTAGCCACTCCGAGGACTCCTGTGCAGCCACCACGTCTCTTCAAAACCCTGCAGAACCCCAGGCCCTGAGAGGCAGAGAAGCCACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CCA 72 bp | GTGACTCCAACATGTTCTCAGCAGCCTCTCGGGAGATaGTGCCATGGAACCACTCGGGGATCCCGGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTPTCSQQPLGR*CHGTTRGSRIG Trigger: CCCAATCCGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGGCTGCTGAGAACATGTTGGAGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CAA 72 bp | TTCTCTGCCTCTCAGGGCCTGGGGTTCTGCAGGGTTTaGAAGAGACGTGGTGGCTGCACAGGAGTCCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSASQGLGFCRV*KRRGGCTGVLG Trigger: TCCGAGGACTCCTGTGCAGCCACCACGTCTCTTCAAAACCCTGCAGAACCCCAGGCCCTGAGAGGCAGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS TCA 72 bp | CCTGGCATCCCCCAGCAGGTTCATGGCCAACAGGTGTaGAGTGAGTCGCTGTTTCACCCTCTGGCTAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGIPQQVHGQQV*SESLFHPLASL Trigger: CAGACTAGCCAGAGGGTGAAACAGCGACTCACTTCACACCTGTTGGCCATGAACCTGCTGGGGGATGCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS GCA 72 bp | ACTCCAACATGTTCTCAGCAGCCTCTCGGGAGATGGTaGCATGGAACCACTCGGGGATCCCGGATTGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TPTCSQQPLGRW*HGTTRGSRIGL Trigger: TAGCCCAATCCGGGATCCCCGAGTGGTTCCATGGCACCATCTCCCGAGAGGCTGCTGAGAACATGTTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 72 bp | AACAGCTCCCCGAATGGCCGAATAGGCTTTTGTTGGTaGAAGGTGACCAGGGCATGCAGAGAGGCGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NSSPNGRIGFCW*KVTRACREAWV Trigger: GACCCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 72 bp | GTCAACAGCTCCCCGAATGGCCGAATAGGCTTTTGTTaGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VNSSPNGRIGFC*WKVTRACREAW Trigger: CCACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CAA 72 bp | GGTCAACAGCTCCCCGAATGGCCGAATAGGCTTTTGTaGGTGGAAGGTGACCAGGGCATGCAGAGAGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQQLPEWPNRLL*VEGDQGMQRGV Trigger: CACGCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CAA 72 bp | CTGGGTCAACAGCTCCCCGAATGGCCGAATAGGCTTTaGTTGGTGGAAGGTGACCAGGGCATGCAGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGQQLPEWPNRL*LVEGDQGMQRG Trigger: GCCTCTCTGCATGCCCTGGTCACCTTCCACCAACAAAAGCCTATTCGGCCATTCGGGGAGCTGTTGACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CAA 90 bp | GAACCAGGGCATTTGAGTATAGGAAGAGATCCTCATAGTCCACGTTaGCTGGATCCTCCTGCCCGCAGGCCTGGGTCAACAGCTCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: EPGHLSIGRDPHSPR*LDPPARRPGSTAPR Trigger: TCGGGGAGCTGTTGACCCAGGCCTGCGGGCAGGAGGATCCAGCAAACGTGGACTATGAGGATCTCTTCCTATACTCAAATGCCCTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS TCA 72 bp | CATGTGGTCCCCAGCGAAGGCACAAGTCCCATCTTCTaGAAGTTTCACCATGAAGTGACGGCAGCAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HVVPSEGTSPIF*KFHHEVTAASL Trigger: CAGACTTGCTGCCGTCACTTCATGGTGAAACTTTCAGAAGATGGGACTTGTGCCTTCGCTGGGGACCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CAA 72 bp | CATTTGAGTATAGGAAGAGATCCTCATAGTCCACGTTaGCTGGATCCTCCTGCCCGCAGGCCTGGGTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: HLSIGRDPHSPR*LDPPARRPGST Trigger: TGTTGACCCAGGCCTGCGGGCAGGAGGATCCAGCAAACGTGGACTATGAGGATCTCTTCCTATACTCAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS TCA 72 bp | CTTTCAGAAGCCTCCTCAGGTGGGCAGGAAGACCTTTaGACTTCCGTTCTCAGAATTTGGCTTTCAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LSEASSGGQEDL*TSVLRIWLSAS Trigger: GGATGCTGAAAGCCAAATTCTGAGAACGGAAGTTCAAAGGTCTTCCTGCCCACCTGAGGAGGCTTCTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
||
| CDS CCA 72 bp | TGTTGTGGATGGCTTCCTTTCAGAAGCCTCCTCAGGTaGGCAGGAAGACCTTTGAACTTCCGTTCTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: CCGWLPFRSLLR*AGRPLNFRSQN Trigger: ATTCTGAGAACGGAAGTTCAAAGGTCTTCCTGCCCACCTGAGGAGGCTTCTGAAAGGAAGCCATCCACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 72 bp | CCTTTCAGAAGCCTCCTCAGGTGGGCAGGAAGACCTTaGAACTTCCGTTCTCAGAATTTGGCTTTCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: PFRSLLRWAGRP*NFRSQNLAFSI Trigger: GATGCTGAAAGCCAAATTCTGAGAACGGAAGTTCAAAGGTCTTCCTGCCCACCTGAGGAGGCTTCTGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 90 bp | CTTCCGTTCTCAGAATTTGGCTTTCAGCATCCTGAACCAGGGCATTaGAGTATAGGAAGAGATCCTCATAGTCCACGTTTGCTGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LPFSEFGFQHPEPGH*SIGRDPHSPRLLDP Trigger: AGGATCCAGCAAACGTGGACTATGAGGATCTCTTCCTATACTCAAATGCCCTGGTTCAGGATGCTGAAAGCCAAATTCTGAGAACGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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| CDS CAA 72 bp | TCAGAATTTGGCTTTCAGCATCCTGAACCAGGGCATTaGAGTATAGGAAGAGATCCTCATAGTCCACGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SEFGFQHPEPGH*SIGRDPHSPRL Trigger: CAAACGTGGACTATGAGGATCTCTTCCTATACTCAAATGCCCTGGTTCAGGATGCTGAAAGCCAAATTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072097.14 ENSMUST00000165324.2 |
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