Pregenerated sensors for HSF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070345Ensembl transcript IDs: ENSMUST00000093956.4
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGAGAGCAGATCAAGGCATCTCATCGATCAAGCCTGAAGACCACTaGAACCATGTCTGTGCCAAGGCTCTGCCTGACACACGTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: WRADQGISSIKPEDH*NHVCAKALPDTRSS Trigger: AGAGGAACGTGTGTCAGGCAGAGCCTTGGCACAGACATGGTTTCAGTGGTCTTCAGGCTTGATCGATGAGATGCCTTGATCTGCTCTCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CCA 90 bp | ACTGTGACTCCAGACAGGCGACACTGTGCTGACTACAGTTCAAGATaGCATCACGACTCAGCACACACACTGCTCCAGTACCATCAACAC | + |
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Preference number: 1 (lower is better) Translates to: TVTPDRRHCADYSSR*HHDSAHTLLQYHQH Trigger: GTGTTGATGGTACTGGAGCAGTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCCTGTCTGGAGTCACAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 90 bp | TCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTaGTATTTGCACAAGTCACTGACGATGGCTTTAGGAGATGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SGPAGLFTCTFHLTA*YLHKSLTMALGDGL Trigger: GAGCCCATCTCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 90 bp | CGATCAAGCCTGAAGACCACTGAAACCATGTCTGTGCCAAGGCTCTaGCTGACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCC | + |
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Preference number: 1 (lower is better) Translates to: RSSLKTTETMSVPRL*LTHVPLKVLPLSIA Trigger: GGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTCAGGCAGAGCCTTGGCACAGACATGGTTTCAGTGGTCTTCAGGCTTGATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 90 bp | TGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTaGTTGCTATTTGCACAAGTCACTGACGATGGCTTTAGGAGATGG | + |
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Preference number: 1 (lower is better) Translates to: CVRPCWLVHMHIPLD*LLFAQVTDDGFRRW Trigger: CCATCTCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CCA 90 bp | GGAGATCCAGCTCCTCTATCTGGTATGCTCGTCTGTAAAAACGTTTaGAGAGCAGATCAAGGCATCTCATCGATCAAGCCTGAAGACCAC | + |
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Preference number: 1 (lower is better) Translates to: GDPAPLSGMLVCKNV*RADQGISSIKPEDH Trigger: GTGGTCTTCAGGCTTGATCGATGAGATGCCTTGATCTGCTCTCCAAACGTTTTTACAGACGAGCATACCAGATAGAGGAGCTGGATCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 90 bp | GTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACTaGTCCAGTACCATCAACACAGTAGTTTTTAGATGCTTCTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: VLTTVQDGITTQHTH*SSTINTVVFRCFLK Trigger: CTTCAAGAAGCATCTAAAAACTACTGTGTTGATGGTACTGGAGCAGTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTCAGAGGCTGTTAGTGTaGTGGATGGGCCAAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: TESLWTNPELTLQSSSTSQRLLV*WMGQVR Trigger: CCGGACTTGGCCCATCCATCACACTAACAGCCTCTG...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACTGTCCCCTCCAGCTGTaGCTAGCGCACGATGTCACG | + |
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Preference number: 2 (lower is better) Translates to: GDTVLTTVQDGITTQHTHCPLQL*LAHDVT Trigger: CGTGACATCGTGCGCTAGCCACAGCTGGAGGGGACA...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | GACTCAGAGGCTGTTAGTGTGATGGATGGGCCAAGTCCGGATGCCTaGCTCTTCAAACAGGACGTGGGTTCAGAATCAAGAGCCCGTTCT | + |
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Preference number: 2 (lower is better) Translates to: DSEAVSVMDGPSPDA*LFKQDVGSESRARS Trigger: AGAACGGGCTCTTGATTCTGAACCCACGTCCTGTTTGAAGAGCAAGGCATCCGGACTTGGCCCATCCATCACACTAACAGCCTCTGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTGCTATGCAGGAAGTGAGCTGTaGACCTGCAATGGCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: VSGPAGLFTCTFHLTACYAGSEL*TCNGWY Trigger: GTACCAGCCATTGCAGGTTCACAGCTCACTTCCTGC...ATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTTCTTCAAACAGGACGTaGGTTCAGAATCAAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TESLWTNPELTLQSSSTSSSNRT*VQNQEP Trigger: GGGCTCTTGATTCTGAACCCACGTCCTGTTTGAAGA...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | GGCCCTGACCCGCTTGGACTTGTGCTATTGGTGACCTCTTGTGTCTaGGTTTATCATACCCTCTTCCTTAAAGGGTCACACTGTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GPDPLGLVLLVTSCV*VYHTLFLKGSHCDS Trigger: GGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATGATAAACCAAGACACAAGAGGTCACCAATAGCACAAGTCCAAGCGGGTCAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | CTTGCTCTTCAAACAGGACGTGGGTTCAGAATCAAGAGCCCGTTCTaGGTTACTCACTTAGAAAACGAGCGTTTTCCAGCGTCCTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: LALQTGRGFRIKSPF*VTHLENERFPASSR Trigger: CCGGGAGGACGCTGGAAAACGCTCGTTTTCTAAGTGAGTAACCAAGAACGGGCTCTTGATTCTGAACCCACGTCCTGTTTGAAGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | CCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTGCTATTaGCACAAGTCACTGACGATGGCTTTAGGAGATGGGCTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PAGLFTCTFHLTACY*HKSLTMALGDGLQA Trigger: TGCCTGGAGCCCATCTCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | GTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTaGCTATTTGCACAAGTCACTGACGATGGCTTTAGGAGATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRPCWLVHMHIPLDC*LFAQVTDDGFRRWA Trigger: AGCCCATCTCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTAAGCCTGAAGACCACTaGAACCATGTCTGTGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: RNSSVCQALLACSHAHSTKPEDH*NHVCAK Trigger: CTTGGCACAGACATGGTTTCAGTGGTCTTCAGGCTT...AGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCACTCAGCACACACACTaGTCCAGTACCATCAACACA | + |
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Preference number: 2 (lower is better) Translates to: HTLFLKGSHCDSRQATLCTQHTH*SSTINT Trigger: TGTGTTGATGGTACTGGAGCAGTGTGTGTGCTGAGT...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | AAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTaGACTGCTTGCTATTTGCACAAGTCACTGACGATGGCTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: KCVSGPAGLFTCTFH*TACYLHKSLTMALG Trigger: TCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 90 bp | GAATGTGCTAGACAGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTaGTTCACATGCACATTCCACTTGACTGCTTGCTATTTGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: ECARQELKCVSGPAG*FTCTFHLTACYLHK Trigger: CTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCTGTCTAGCACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCCAAGTCCGGATGCCTTaGTCTTCAAACAGGACGTGG | + |
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Preference number: 2 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSQVRMP*SSNRTW Trigger: CCACGTCCTGTTTGAAGAGCAAGGCATCCGGACTTG...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATGCTGTGAACCTGCAATaGCTGGTACAGTGGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: IFQASLVKMIRCPGRSTNAVNLQ*LVQWQC Trigger: GCATTGCCACTGTACCAGCCATTGCAGGTTCACAGC...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAATGGGCCAAGTCCGGATaGCTTGCTCTTCAAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: DTRSSKGITSFHSHKAKKWAKSG*LALQTG Trigger: TCCTGTTTGAAGAGCAAGGCATCCGGACTTGGCCCA...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAACGCTTATTAGGAAACTaGGTGTGTGTGTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: DTRSSKGITSFHSHKAKKRLLGN*VCVWGW Trigger: CCACCCCCACACACACACCCAGTTTCCTAATAAGCG...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATCCAGGACTTTTCATTTaGAAGGAATCTGGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: IFQASLVKMIRCPGRSTNPGLFI*KESGQH Trigger: ATGCTGCCCAGATTCCTTTCAAATGAAAAGTCCTGG...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTATCTGGACTGAACAGTTaGAGTGAATATCAAACTCCC | + |
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Preference number: 2 (lower is better) Translates to: QASLVKMIRCPGRSTNSLSGLNS*SEYQTP Trigger: GGGAGTTTGATATTCACTCCAACTGTTCAGTCCAGA...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATACAGTAGTTTTTAGATaGTTCTTGAAGGCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: IFQASLVKMIRCPGRSTNTVVFR*FLKART Trigger: AGTCCTGGCCTTCAAGAAGCATCTAAAAACTACTGT...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGTAAAGATGATTAGGTaGCCAGGAAGGAGCACAAAT | + |
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Preference number: 2 (lower is better) Translates to: DTRSSKGITSFHSHKAKKVKMIR*PGRSTN Trigger: ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTAC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAAATTACAAAAGTTCTTaGTGTCACTGGGTGGACATG | + |
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Preference number: 2 (lower is better) Translates to: DTRSSKGITSFHSHKAKKNYKSS*CHWVDM Trigger: CATGTCCACCCAGTGACAGCAAGAACTTTTGTAATT...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR GCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGTGTTAACCTCTCAGTaGTTTTGTCTACATATTGTA | + |
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Preference number: 2 (lower is better) Translates to: DTRSSKGITSFHSHKAKKVLTSQ*FCLHIV Trigger: TACAATATGTAGACAAAAGCACTGAGAGGTTAACAC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 72 bp | TTAACAGAACTGAAAAACTCCCAACAGTGTGTCATGTaGAGCGCCTGTCCCCTCCAGCTGTGGCTAGCGCAC | + |
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Preference number: 3 (lower is better) Translates to: LTELKNSQQCVM*SACPLQLWLAH Trigger: GTGCGCTAGCCACAGCTGGAGGGGACAGGCGCTGCACATGACACACTGTTGGGAGTTTTTCAGTTCTGTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CCA 72 bp | CCAGACAGGCGACACTGTGCTGACTACAGTTCAAGATaGCATCACGACTCAGCACACACACTGCTCCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: PDRRHCADYSSR*HHDSAHTLLQY Trigger: GTACTGGAGCAGTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCCTGTCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR TCA 72 bp | GATCAAGGCATCTCATCGATCAAGCCTGAAGACCACTaGAACCATGTCTGTGCCAAGGCTCTGCCTGACACA | + |
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Preference number: 3 (lower is better) Translates to: DQGISSIKPEDH*NHVCAKALPDT Trigger: TGTGTCAGGCAGAGCCTTGGCACAGACATGGTTTCAGTGGTCTTCAGGCTTGATCGATGAGATGCCTTGATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 72 bp | CCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTaGTTGCTATTTGCACAAGTCACTGACGATGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: PCWLVHMHIPLD*LLFAQVTDDGF Trigger: AAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CAA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACGTTTTTAGATGCTTCTaGAAGGCCAGGACTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: GDTVLTTVQDGITTQHTHVFRCF*KARTFH Trigger: ATGAAAAGTCCTGGCCTTCAAGAAGCATCTAAAAAC...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTTGGTTTATCATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACGCCAGGACTTTTCATTaGAAAGGAATCTGGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: VSWFIIPSSLKGHTVTPDARTFH*KGIWAA Trigger: TGCTGCCCAGATTCCTTTCAAATGAAAAGTCCTGGC...GTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATGATAAACCAAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 72 bp | GCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTaGTATTTGCACAAGTCACTGACGATGGCTTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: AGLFTCTFHLTA*YLHKSLTMALG Trigger: TCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR TCA 72 bp | GAACTATCACCTACACAGCTTACCAGCTCTTCAATGTaGCAGAGAAAAGGCAAAGGTCCTTCATTAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ELSPTQLTSSSM*QRKGKGPSLEA Trigger: GGCTTCTAATGAAGGACCTTTGCCTTTTCTCTGTCACATTGAAGAGCTGGTAAGCTGTGTAGGTGATAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CAA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAAGAGGGATAAGAAAATaGGTGATAGTCTACTCCACT | + |
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Preference number: 3 (lower is better) Translates to: QASLVKMIRCPGRSTNSLRGIRK*VIVYST Trigger: AGTGGAGTAGACTATCACCAATTTTCTTATCCCTCT...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 72 bp | GGTATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTaGCCAGGAAGGAGCACAAATAGTCTAATTAGATGG | + |
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Preference number: 3 (lower is better) Translates to: GIFQASLVKMIR*PGRSTNSLIRW Trigger: CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 72 bp | CACTGCTCCAGTACCATCAACACAGTAGTTTTTAGATaGTTCTTGAAGGCCAGGACTTTTCATTTGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: HCSSTINTVVFR*FLKARTFHLKG Trigger: TCCTTTCAAATGAAAAGTCCTGGCCTTCAAGAAGCATCTAAAAACTACTGTGTTGATGGTACTGGAGCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR-3UTR CAA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGGCTATTGGTGACCTCTaGTGTCTTGGTTTATCATAC | + |
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Preference number: 3 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWAIGDL*CLGLSY Trigger: GTATGATAAACCAAGACACAAGAGGTCACCAATAGC...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR GCA 72 bp | TCTAGTCCTGAAAATCCATTAAATTACAAAAGTTCTTaGTGTCACTGGGTGGACATGGATTGGCTACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SSPENPLNYKSS*CHWVDMDWLQK Trigger: TTTTTGTAGCCAATCCATGTCCACCCAGTGACAGCAAGAACTTTTGTAATTTAATGGATTTTCAGGACTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACAGAGCGGCTGGTCGATaGGCAGCCCCTCGCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GDTVLTTVQDGITTQHTHRAAGR*AAPRLG Trigger: GCCGAGGCGAGGGGCTGCTCATCGACCAGCCGCTCT...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCGCCGCTGGAAGCGGTTaGGCGGGCGACAGGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: HTLFLKGSHCDSRQATLCAAGSG*AGDRAP Trigger: AGGTGCCCTGTCGCCCGCCCAACCGCTTCCAGCGGC...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTGTGATGAGGAGCCGCTaGAAGCGGTTGGGCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSVMRSR*KRLGGR Trigger: TCGCCCGCCCAACCGCTTCCAGCGGCTCCTCATCAC...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTCTGAGGGCGTCCATGTaGGTGGGAGGAGAGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSLRASM*VGGEQH Trigger: GTGCTGCTCTCCTCCCACCCACATGGACGCCCTCAG...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCGCCTCGAAGAGCGGCTaGTCGATGAGCAGCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HTLFLKGSHCDSRQATLCASKSG*SMSSPS Trigger: CGAGGGGCTGCTCATCGACCAGCCGCTCTTCGAGGC...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTGCTATGGGCGTCCATGTGGGTaGGAGGAGAGCAGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGPAGLFTCTFHLTACYGRPCG*EESSTA Trigger: TGCAGTGCTGCTCTCCTCCCACCCACATGGACGCCC...ATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | AGCTCGACCTCTGCGACACTTCTGGGTCTAATGCCATaGGGAAGGCCCAGCGCAAAGCAGGAAGTGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSATLLGLMP*GRPSAKQEVSC Trigger: ACAGCTCACTTCCTGCTTTGCGCTGGGCCTTCCCAATGGCATTAGACCCAGAAGTGTCGCAGAGGTCGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGCCGGGCCGGGCGGGCTaGGCAGCTCGGCCTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWPGRAG*AARPRR Trigger: TCTTCGAGGCCGAGCTGCTCAGCCCGCCCGGCCCGG...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCTGCGGGCTGTGGAAGTaGTGGAGTGGCCCGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSCGLWK*WSGPSP Trigger: GGGCGACGGGCCACTCCACCACTTCCACAGCCCGCA...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACTTGTCCTACAGCCACTaGTCCATGCTGCTCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GDTVLTTVQDGITTQHTHLSYSH*SMLLWP Trigger: CGGCCAGAGCAGCATGGACCAGTGGCTGTAGGACAA...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTTTGGGAGTACTGCGCTaGGGGTGTGTAGTTACTATA | + |
|
Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSLGVLR*GCVVTI Trigger: TATAGTAACTACACACCCTCAGCGCAGTACTCCCAA...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACACGTCCACCAGCAGATaGAGATCAGGGGACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDTVLTTVQDGITTQHTHTSTSR*RSGDFP Trigger: AGGAAAGTCCCCTGATCTTCATCTGCTGGTGGACGT...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACTCCACTTGTCCAGGGTaGATTCCAAGGGAGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTVLTTVQDGITTQHTHSTCPG*IPREFC Trigger: GCAGAACTCCCTTGGAATGCACCCTGGACAAGTGGA...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTACCAGCCGCCACAGCTTaGCGGGGAAGTTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QASLVKMIRCPGRSTNSLPAATA*RGSCWG Trigger: ACCCCAACAACTTCCCCGCCAAGCTGTGGCGGCTGG...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTACGGAAATGCGGGCTGTaGAAGTGGTGGAGTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QASLVKMIRCPGRSTNSLRKCGL*KWWSGP Trigger: CGGGCCACTCCACCACTTCCACAGCCCGCATTTCCG...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GTGTCTTGGTTTATCATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACTGGTCCATGCTGCTCTaGCCGAGGCCCAGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSWFIIPSSLKGHTVTPDWSMLL*PRPSRL Trigger: CAACCTGCTGGGCCTCGGCCAGAGCAGCATGGACCA...GTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATGATAAACCAAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCAGGGGACTTTCCTTGTaGGTTGCTTCTTCGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTLFLKGSHCDSRQATLCRGLSL*VASSLS Trigger: AGAGAGCGAAGAAGCAACTCACAAGGAAAGTCCCCT...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGGGCCGTCCCAGCGGATaGAGCGGTACCGAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWGRPSG*SGTEGC Trigger: ACAGCCCTCGGTACCGCTCCATCCGCTGGGACGGCC...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCATTTTTGGGAGGAGCTaGCCATCGTTTGAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLFLKGSHCDSRQATLCIFGRS*PSFEDL Trigger: AAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAAT...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTGAATCCCATTTGTTCTaGAGGCAAGATATTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSESHLF*RQDILR Trigger: TCGGAGAATATCTTGCCTTCAGAACAAATGGGATTC...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | AGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTATTCCAAGGGAGTTCTaGCACGTTCTGGGAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RNSSVCQALLACSHAHSTIPREF*HVLGGI Trigger: GATTCCTCCCAGAACGTGGCAGAACTCCCTTGGAAT...AGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTACTTTCCTTGTGAGTTaGTTCTTCGCTCTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSTFLVS*FFALCI Trigger: GATACAGAGAGCGAAGAAGCAACTCACAAGGAAAGT...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTCTTTATCTGAAAAAGTaGGAGACGTCTCCACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSLYLKK*ETSPLV Trigger: GACAAGTGGAGACGTCTCCCACTTTTTCAGATAAAG...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTGCTATCTGCAGCACAGCTGTTaGATAGTAGGCTTGGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSGPAGLFTCTFHLTACYLQHSC*IVGLGV Trigger: TACTCCCAAGCCTACTATCCAACAGCTGTGCTGCAG...ATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | GCTGTTAGTGTGATGGATGGGCCAAGTCCGGATGCCTaGCTCTTCAAACAGGACGTGGGTTCAGAATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVSVMDGPSPDA*LFKQDVGSESR Trigger: TCTTGATTCTGAACCCACGTCCTGTTTGAAGAGCAAGGCATCCGGACTTGGCCCATCCATCACACTAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | GTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTGCTATTGGAACCCCTTTATCTaGAAAAGTGGGAGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSGPAGLFTCTFHLTACYWNPFI*KSGRRL Trigger: GAGACGTCTCCCACTTTTTCAGATAAAGGGGTTCCA...ATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | AGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTGACGGAGATGGGTTATaGTTTAGCTGCTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNSSVCQALLACSHAHSTDGDGL*FSCSFS Trigger: ACTGAAGGAGCAGCTAAATCATAACCCATCTCCGTC...AGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACAGCAGGCCCCATTTCTaGAATAAGGAATCCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDTVLTTVQDGITTQHTHSRPHF*NKESHL Trigger: CAAATGGGATTCCTTATTTCAGAAATGGGGCCTGCT...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCTGGAAGATGGGTTGCTaGTGTTTGCATTGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTLFLKGSHCDSRQATLCWKMGC*CLHWVR Trigger: TCTTACCCAATGCAAACAGCAGCAACCCATCTTCCA...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATGGAAGTGTTCCTGCTTaGAGGCCACGTCCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFQASLVKMIRCPGRSTNGSVPA*RPRPPA Trigger: TGCTGGTGGACGTGGCCTGCAAGCAGGAACACTTCC...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTATATGTAACCTCAGTTaGAAATCTCTGCAGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TESLWTNPELTLQSSSTSICNLS*KSLQYR Trigger: CCTGTACTGCAGAGATTTCCAACTGAGGTTACATAT...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGCCTACAGGAGTGAGTaGCTCCAGCTGGCTAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSKGITSFHSHKAKKAYRSE*LQLASL Trigger: CAGGCTAGCCAGCTGGAGCCACTCACTCCTGTAGGC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | TCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTaGACTGCTTGCTATTTGCACAAGTCACTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGPAGLFTCTFH*TACYLHKSLTM Trigger: CATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATGAACGTGTACAGATGTaGCGCTGGGCTGCAGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IFQASLVKMIRCPGRSTNERVQM*RWAAAY Trigger: ATACGCTGCAGCCCAGCGCCACATCTGTACACGTTC...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACCATGAGTTTGTTGGATaGTTGCAGATTCCTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GDTVLTTVQDGITTQHTHHEFVG*LQIPAL Trigger: CAATGCAGGAATCTGCAACCATCCAACAAACTCATG...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | CAAACAGGACGTGGGTTCAGAATCAAGAGCCCGTTCTaGGTTACTCACTTAGAAAACGAGCGTTTTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTGRGFRIKSPF*VTHLENERFPA Trigger: CGCTGGAAAACGCTCGTTTTCTAAGTGAGTAACCAAGAACGGGCTCTTGATTCTGAACCCACGTCCTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCTGGGAGGAATCGGGGTaGGATCTAAACCTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSWEESG*DLNLSE Trigger: CTCTGAAAGGTTTAGATCGCACCCCGATTCCTCCCA...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAATTTGGGAAGTGTTCCTaGTTGCAGGCCACGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSKGITSFHSHKAKKFGKCS*LQATST Trigger: GGTGGACGTGGCCTGCAAGCAGGAACACTTCCCAAA...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAAGTTCTGCCACGTTCTaGGAGGAATCGGGGTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSKGITSFHSHKAKKSSATF*EESGCD Trigger: ATCGCACCCCGATTCCTCCCAGAACGTGGCAGAACT...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGCGCCGGAATGACCGGTaGAATTGTCCTACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWRRNDR*NCPTAT Trigger: AGTGGCTGTAGGACAATTTCACCGGTCATTCCGGCG...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAGCTGCTCCTTCAGTTTaGCATGAGTTTGTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QASLVKMIRCPGRSTNSLAAPSV*HEFVGW Trigger: CCATCCAACAAACTCATGTCAAACTGAAGGAGCAGC...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | CCGCTTGGACTTGTGCTATTGGTGACCTCTTGTGTCTaGGTTTATCATACCCTCTTCCTTAAAGGGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGLVLLVTSCV*VYHTLFLKGSH Trigger: GTGTGACCCTTTAAGGAAGAGGGTATGATAAACCAAGACACAAGAGGTCACCAATAGCACAAGTCCAAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | TGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTaGCTATTTGCACAAGTCACTGACGATGGCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CWLVHMHIPLDC*LFAQVTDDGFR Trigger: CCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCCTGCACAAATACTACTaGAGACGGAGATGGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSLHKYY*RRRWVM Trigger: CATAACCCATCTCCGTCTTCAGTAGTATTTGTGCAG...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| 3UTR CAA 72 bp | TTGTTCACATGCACATTCCACTTGACTGCTTGCTATTaGCACAAGTCACTGACGATGGCTTTAGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTCTFHLTACY*HKSLTMALGDG Trigger: CCCATCTCCTAAAGCCATCGTCAGTGACTTGTGCAAATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| 3UTR CAA 72 bp | AAGCCGGTCTCCTTTTCACATATTTTGCCAAGACATTaGGCACAGATAGATGTAGACGTCTCAATCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVSFSHILPRH*AQIDVDVSIVW Trigger: CCAGACGATTGAGACGTCTACATCTATCTGTGCCAAATGTCTTGGCAAAATATGTGAAAAGGAGACCGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR TCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGATTATCTCGCCGGAATaGCCGGTGAAATTGTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWIISPE*PVKLSY Trigger: GTAGGACAATTTCACCGGTCATTCCGGCGAGATAAT...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGTGCTGCTGTTTGCATTaGGTAAGATATGCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWCCCLH*VRYAGL Trigger: GAGGCCAGCATATCTTACCCAATGCAAACAGCAGCA...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGCTGACTGGTGGAAGATaGGTTGCTGCTGTTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWLTGGR*VAAVCI Trigger: AATGCAAACAGCAGCAACCCATCTTCCACCAGTCAG...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGTTGAGCTGTGTGGATaGTATAGATGTACTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSKGITSFHSHKAKKVELCG*YRCTQV Trigger: CACCTGAGTACATCTATACCATCCACACAGCTCAAC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| 3UTR CAA 72 bp | TACTCAAGTGCACAGTCCAACAGAGGGATAAGAAAATaGGTGATAGTCTACTCCACTGTCCAAAAGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSSAQSNRGIRK*VIVYSTVQKSL Trigger: GAGAGACTTTTGGACAGTGGAGTAGACTATCACCAATTTTCTTATCCCTCTGTTGGACTGTGCACTTGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGAAAAGACGTAATATCTaGGCCTACAGGAGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWKRRNI*AYRSEW Trigger: CCACTCACTCCTGTAGGCTCAGATATTACGTCTTTT...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCATGGTTGCAGATTCCTaGATTGTGCTATTTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSMVADS*IVLFSK Trigger: TTTGGAAAATAGCACAATGCAGGAATCTGCAACCAT...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAAATGGTAGCCCTTCCTaGACAAATACTACTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DTRSSKGITSFHSHKAKKNGSPS*TNTTED Trigger: GTCTTCAGTAGTATTTGTGCAGGAAGGGCTACCATT...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | GTGTCTTGGTTTATCATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACATAGGAAGATTGCATTaGAGGATTCTGGAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VSWFIIPSSLKGHTVTPDIGRLH*RILEVI Trigger: AATTACTTCCAGAATCCTCCAATGCAATCTTCCTAT...GTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATGATAAACCAAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR GCA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGCAGATTCCTGCATTGTaGTATTTTCCAAAGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWQIPAL*YFPKVE Trigger: CTCAACCTTTGGAAAATAGCACAATGCAGGAATCTG...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR TCA 90 bp | ACATGGATTGGCTACAAAAACTGGACATCTAAAATCTCCTCCTTCTCCTTAAAATCCTTCAGTTTGACATaGGTTTGTTGGATGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWIGYKNWTSKISSFSLKSFSLT*VCWMVA Trigger: TGCAACCATCCAACAAACTCATGTCAAACTGAAGGA...TTTTAAGGAGAAGGAGGAGATTTTAGATGTCCAGTTTTTGTAGCCAATCCATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CCA 90 bp | ACATGGATTGGCTACAAAAACTGGACATCTAAAATCTCCTCCTTCTCCTTAAAAAGGCAGAAATTCAACTaGATAGGAAGATTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWIGYKNWTSKISSFSLKRQKFN*IGRLHW Trigger: CCAATGCAATCTTCCTATCCAGTTGAATTTCTGCCT...TTTTAAGGAGAAGGAGGAGATTTTAGATGTCCAGTTTTTGTAGCCAATCCATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS CCA 90 bp | GCACCCGGGCCGGGCGGGCTGAGCAGCTCGGCCTCGAAGAGCGGCTaGTCGATGAGCAGCCCCTCGCCTCGGCCGTCCCAGCGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: APGPGGLSSSASKSG*SMSSPSPRPSQRME Trigger: CTCCATCCGCTGGGACGGCCGAGGCGAGGGGCTGCTCATCGACCAGCCGCTCTTCGAGGCCGAGCTGCTCAGCCCGCCCGGCCCGGGTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 90 bp | GTAGAAGCTGAGGCCGAGGCGGAGGCTGACGTGATGAGGAGCCGCTaGAAGCGGTTGGGCGGGCGACAGGGCACCTCCAGTCCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEAEAEAEADVMRSR*KRLGGRQGTSSPAA Trigger: GGCGGCCGGACTGGAGGTGCCCTGTCGCCCGCCCAACCGCTTCCAGCGGCTCCTCATCACGTCAGCCTCCGCCTCGGCCTCAGCTTCTAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | GGCGACACTGTGCTGACTACAGTTCAAGATGGCATCACGACTCAGCACACACACAGCCGCTGGAAGCGGTaGGGCGGGCGACAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GDTVLTTVQDGITTQHTHSRWKR*GGRQGT Trigger: GGTGCCCTGTCGCCCGCCCAACCGCTTCCAGCGGCT...GTGTGTGTGCTGAGTCGTGATGCCATCTTGAACTGTAGTCAGCACAGTGTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CAA 90 bp | AGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTCCGAGGCCCAGCAGGTaGGGGCGGCGGGTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RNSSVCQALLACSHAHSTPRPSR*GRRVLM Trigger: CATCAGGACCCGCCGCCCCAACCTGCTGGGCCTCGG...AGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CAA 90 bp | AGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTACCAGCCGCCACAGCTaGGCGGGGAAGTTGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNSSVCQALLACSHAHSTTSRHS*AGKLLG Trigger: CCCCAACAACTTCCCCGCCAAGCTGTGGCGGCTGGT...AGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 90 bp | GGTGCATTCCAAGGGAGTTCTGCCACGTTCTGGGAGGAATCGGGGTaGGATCTAAACCTTTCAGAGGGAAAGCGCTGTGGTTGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GAFQGSSATFWEESG*DLNLSEGKRCGCGM Trigger: CATCCCACAACCACAGCGCTTTCCCTCTGAAAGGTTTAGATCGCACCCCGATTCCTCCCAGAACGTGGCAGAACTCCCTTGGAATGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 90 bp | GTGGGAGACGTCTCCACTTGTCCAGGGTGCATTCCAAGGGAGTTCTaGCACGTTCTGGGAGGAATCGGGGTGCGATCTAAACCTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGDVSTCPGCIPREF*HVLGGIGVRSKPFR Trigger: TCTGAAAGGTTTAGATCGCACCCCGATTCCTCCCAGAACGTGGCAGAACTCCCTTGGAATGCACCCTGGACAAGTGGAGACGTCTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 90 bp | TCTCCACTTGTCCAGGGTGCATTCCAAGGGAGTTCTGCCACGTTCTaGGAGGAATCGGGGTGCGATCTAAACCTTTCAGAGGGAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLVQGAFQGSSATF*EESGCDLNLSEGKR Trigger: GCGCTTTCCCTCTGAAAGGTTTAGATCGCACCCCGATTCCTCCCAGAACGTGGCAGAACTCCCTTGGAATGCACCCTGGACAAGTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAAGTCCGGCCGCCAGCTaGGCCTTGTTGGCACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QASLVKMIRCPGRSTNSLSPAAS*ALLALV Trigger: CACCAGTGCCAACAAGGCCAAGCTGGCGGCCGGACT...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTCGTTTGAGGACCTTGTaGAACGTGTACAGATGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TESLWTNPELTLQSSSTSRLRTL*NVYRCG Trigger: GCCACATCTGTACACGTTCAACAAGGTCCTCAAACG...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTGAGTTTGTTGGATGGTaGCAGATTCCTGCATTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TESLWTNPELTLQSSSTSEFVGW*QIPALC Trigger: GCACAATGCAGGAATCTGCAACCATCCAACAAACTC...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAGGGAAGTTGTTGGGGTaGATGGGGGTGGACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QASLVKMIRCPGRSTNSLGKLLG*MGVDSS Trigger: GCTGCTGTCCACCCCCATCAACCCCAACAACTTCCC...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCGCCAGCTTGGCCTTGTaGGCACTGGTGAGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSASLAL*ALVSLL Trigger: CAAGAGGCTCACCAGTGCCAACAAGGCCAAGCTGGC...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 90 bp | GCACTGCAGCACAGCTGTTGGATAGTAGGCTTGGGAGTACTGCGCTaGGGGTGTGTAGTTACTATATTTTTGGGAGGAGCTGACCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: ALQHSCWIVGLGVLR*GCVVTIFLGGADHR Trigger: ACGATGGTCAGCTCCTCCCAAAAATATAGTAACTACACACCCTCAGCGCAGTACTCCCAAGCCTACTATCCAACAGCTGTGCTGCAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCGGGAGACGTCTCCACTaGTCCAGGGTGCATTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSGRRLH*SRVHSK Trigger: CTTGGAATGCACCCTGGACAAGTGGAGACGTCTCCC...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCAGAGCAGCTCGACCTCTCAGTTTGACATGAGTTaGTTGGATGGTTGCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TESLWTNPELTLQSSSTSQFDMS*LDGCRF Trigger: GAATCTGCAACCATCCAACAAACTCATGTCAAACTG...AGAGGTCGAGCTGCTCTGGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 90 bp | GCAGGTAATTGCTTGTTCTGTTCCAACCACAAAAGACGTAATATCTaGGCCTACAGGAGTGAGTGGCTCCAGCTGGCTAGCCTGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGNCLFCSNHKRRNI*AYRSEWLQLASLTG Trigger: ACCAGTCAGGCTAGCCAGCTGGAGCCACTCACTCCTGTAGGCTCAGATATTACGTCTTTTGTGGTTGGAACAGAACAAGCAATTACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | AGGAACTCAAGTGTGTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTATGAAGCTGGTGAAGTaGGTGGTTTTGAAGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNSSVCQALLACSHAHSTMKLVK*VVLKSS Trigger: GGAGCTCTTCAAAACCACCAACTTCACCAGCTTCAT...AGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACACACACTTGAGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 90 bp | AGTACTGCGCTGAGGGTGTGTAGTTACTATATTTTTGGGAGGAGCTaGCCATCGTTTGAGGACCTTGTTGAACGTGTACAGATGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: STALRVCSYYIFGRS*PSFEDLVERVQMWR Trigger: GCGCCACATCTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAATATAGTAACTACACACCCTCAGCGCAGTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 90 bp | AGGGATTGGTCTGGCATTTTATACTGCTATCCACCTGCGGTGTGCTaGATGGTAGCCCTTCCTGCACAAATACTACTGAAGACGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RDWSGILYCYPPAVC*MVALPAQILLKTEM Trigger: CATCTCCGTCTTCAGTAGTATTTGTGCAGGAAGGGCTACCATTCAGCACACCGCAGGTGGATAGCAGTATAAAATGCCAGACCAATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 90 bp | GTGGCGCTGGGCTGCAGCGTATATGTAACCTCAGTTGGAAATCTCTaGAGTACAGGAAATGGAACCCCTTTATCTGAAAAAGTGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VALGCSVYVTSVGNL*STGNGTPLSEKVGD Trigger: GTCTCCCACTTTTTCAGATAAAGGGGTTCCATTTCCTGTACTGCAGAGATTTCCAACTGAGGTTACATATACGCTGCAGCCCAGCGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CATACCCTCTTCCTTAAAGGGTCACACTGTGACTCCAGACAGGCGACACTGTGCTTTGACATGAGTTTGTaGGATGGTTGCAGATTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTLFLKGSHCDSRQATLCFDMSL*DGCRFL Trigger: CAGGAATCTGCAACCATCCAACAAACTCATGTCAAA...GCACAGTGTCGCCTGTCTGGAGTCACAGTGTGACCCTTTAAGGAAGAGGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 90 bp | CTCAGTTGGAAATCTCTGCAGTACAGGAAATGGAACCCCTTTATCTaGAAAAGTGGGAGACGTCTCCACTTGTCCAGGGTGCATTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSWKSLQYRKWNPFI*KSGRRLHLSRVHSK Trigger: CTTGGAATGCACCCTGGACAAGTGGAGACGTCTCCCACTTTTTCAGATAAAGGGGTTCCATTTCCTGTACTGCAGAGATTTCCAACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 90 bp | GAAATCTCTGCAGTACAGGAAATGGAACCCCTTTATCTGAAAAAGTaGGAGACGTCTCCACTTGTCCAGGGTGCATTCCAAGGGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EISAVQEMEPLYLKK*ETSPLVQGAFQGSS Trigger: AGAACTCCCTTGGAATGCACCCTGGACAAGTGGAGACGTCTCCCACTTTTTCAGATAAAGGGGTTCCATTTCCTGTACTGCAGAGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATCTGGTGGAAGATGGGTaGCTGCTGTTTGCATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IFQASLVKMIRCPGRSTNLVEDG*LLFALG Trigger: ACCCAATGCAAACAGCAGCAACCCATCTTCCACCAG...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | GTGTCAGGCCCTGCTGGCTTGTTCACATGCACATTCCACTTGACTGCTTGCTATATATTCTCCGAGGGATaGGTCTGGCATTTTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSGPAGLFTCTFHLTACYIFSEG*VWHFIL Trigger: CAGTATAAAATGCCAGACCAATCCCTCGGAGAATAT...ATAGCAAGCAGTCAAGTGGAATGTGCATGTGAACAAGCCAGCAGGGCCTGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ACATGGATTGGCTACAAAAACTGGACATCTAAAATCTCCTCCTTCTCCTTAAAAGGGAAGTGTTCCTGCTaGCAGGCCACGTCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TWIGYKNWTSKISSFSLKGKCSC*QATSTS Trigger: GCTGGTGGACGTGGCCTGCAAGCAGGAACACTTCCC...TTTTAAGGAGAAGGAGGAGATTTTAGATGTCCAGTTTTTGTAGCCAATCCATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 90 bp | AATCCCATTTGTTCTGAAGGCAAGATATTCTCCGAGGGATTGGTCTaGCATTTTATACTGCTATCCACCTGCGGTGTGCTGAATGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NPICSEGKIFSEGLV*HFILLSTCGVLNGS Trigger: GCTACCATTCAGCACACCGCAGGTGGATAGCAGTATAAAATGCCAGACCAATCCCTCGGAGAATATCTTGCCTTCAGAACAAATGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGGGAAAGCGCTGTGGTaGTGGGATGAAGTTGATACG | + |
|
Preference number: 5 (lower is better) Translates to: DTRSSKGITSFHSHKAKKGKALW*WDEVDT Trigger: CGTATCAACTTCATCCCACAACCACAGCGCTTTCCC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAACTGCAGCACAGCTGTaGGATAGTAGGCTTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DTRSSKGITSFHSHKAKKTAAQL*DSRLGS Trigger: ACTCCCAAGCCTACTATCCAACAGCTGTGCTGCAGT...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGGGAGCTGACCATCGTTaGAGGACCTTGTTGAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWGADHR*RTLLNV Trigger: CACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCC...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCATGGGTTGCTGCTGTTaGCATTGGGTAAGATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSMGCCC*HWVRYA Trigger: AGCATATCTTACCCAATGCAAACAGCAGCAACCCAT...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATCATCGTTTGAGGACCTaGTTGAACGTGTACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: IFQASLVKMIRCPGRSTNHRLRT*LNVYRC Trigger: ACATCTGTACACGTTCAACAAGGTCCTCAAACGATG...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CAA 90 bp | CAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAGCTATTTTCCAAAGGTaGAGCTGTGTGGATGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: QASLVKMIRCPGRSTNSLAIFQR*SCVDGI Trigger: TATACCATCCACACAGCTCAACCTTTGGAAAATAGC...TAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS TCA 90 bp | CTACTGAAGACGGAGATGGGTTATGATTTAGCTGCTCCTTCAGTTTaGCATGAGTTTGTTGGATGGTTGCAGATTCCTGCATTGTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLKTEMGYDLAAPSV*HEFVGWLQIPALCY Trigger: ATAGCACAATGCAGGAATCTGCAACCATCCAACAAACTCATGTCAAACTGAAGGAGCAGCTAAATCATAACCCATCTCCGTCTTCAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CAA 90 bp | CCTAGTTTCAAAATTAAACTGAGTCGCTGTGGACTAATCCAGAGCTCACCCTCCTTGCAGATTCCTGCATaGTGCTATTTTCCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSFKIKLSRCGLIQSSPSLQIPA*CYFPKV Trigger: AACCTTTGGAAAATAGCACAATGCAGGAATCTGCAA...GGAGGGTGAGCTCTGGATTAGTCCACAGCGACTCAGTTTAATTTTGAAACTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
||
| CDS-3UTR CAA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGACTTTCCTTGTGAGTaGCTTCTTCGCTCTCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: DTRSSKGITSFHSHKAKKDFPCE*LLRSLY Trigger: ATACAGAGAGCGAAGAAGCAACTCACAAGGAAAGTC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | GACACACGTTCCTCTAAAGGTATTACCTCTTTCCATAGCCACAAGGCTAAGAAAGTAGTTACTATATTTTaGGGAGGAGCTGACCATCGT | + |
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Preference number: 5 (lower is better) Translates to: DTRSSKGITSFHSHKAKKVVTIF*GGADHR Trigger: ACGATGGTCAGCTCCTCCCAAAAATATAGTAACTAC...TTTCTTAGCCTTGTGGCTATGGAAAGAGGTAATACCTTTAGAGGAACGTGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ATCTTTCAAGCCTCCCTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATGATAGGAAGATTGCATaGGAGGATTCTGGAAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: IFQASLVKMIRCPGRSTNDRKIA*EDSGSN Trigger: ATTACTTCCAGAATCCTCCAATGCAATCTTCCTATC...ATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAGGGAGGCTTGAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 90 bp | TTCATCAGTAGCACTGCAAGGCCAATTAGAAGGCAGAAATTCAACTaGATAGGAAGATTGCATTGGAGGATTCTGGAAGTAATTACAGTG | + |
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Preference number: 5 (lower is better) Translates to: FISSTARPIRRQKFN*IGRLHWRILEVITV Trigger: CACTGTAATTACTTCCAGAATCCTCCAATGCAATCTTCCTATCCAGTTGAATTTCTGCCTTCTAATTGGCCTTGCAGTGCTACTGATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | CTAGTAAAGATGATTAGGTGCCCAGGAAGGAGCACAAATAGTCTAATTAGATGGAGAGCAGGTAATTGCTaGTTCTGTTCCAACCACAAA | + |
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Preference number: 5 (lower is better) Translates to: LVKMIRCPGRSTNSLIRWRAGNC*FCSNHK Trigger: TTTGTGGTTGGAACAGAACAAGCAATTACCTGCTCT...CCATCTAATTAGACTATTTGTGCTCCTTCCTGGGCACCTAATCATCTTTACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS-3UTR CAA 90 bp | ACATGGATTGGCTACAAAAACTGGACATCTAAAATCTCCTCCTTCTCCTTAAAAGTGTCTTTAGTAGACTaGTTAGCAGGCCCCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: TWIGYKNWTSKISSFSLKVSLVD*LAGPIS Trigger: AGAAATGGGGCCTGCTAACAAGTCTACTAAAGACAC...TTTTAAGGAGAAGGAGGAGATTTTAGATGTCCAGTTTTTGTAGCCAATCCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | GGCTGGTCGCGGCGGAAATGCGGGCTGTGGAAGTGGTaGAGTGGCCCGTCGCCCGCCGGCCCGCCAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GWSRRKCGLWKW*SGPSPAGPPAP Trigger: TGGGGCTGGCGGGCCGGCGGGCGACGGGCCACTCCACCACTTCCACAGCCCGCATTTCCGCCGCGACCAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | CCGGGCGGGCTGAGCAGCTCGGCCTCGAAGAGCGGCTaGTCGATGAGCAGCCCCTCGCCTCGGCCGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGGLSSSASKSG*SMSSPSPRPSQ Trigger: CTGGGACGGCCGAGGCGAGGGGCTGCTCATCGACCAGCCGCTCTTCGAGGCCGAGCTGCTCAGCCCGCCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | GCGGAGGCTGACGTGATGAGGAGCCGCTGGAAGCGGTaGGGCGGGCGACAGGGCACCTCCAGTCCGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AEADVMRSRWKR*GGRQGTSSPAA Trigger: GGCGGCCGGACTGGAGGTGCCCTGTCGCCCGCCCAACCGCTTCCAGCGGCTCCTCATCACGTCAGCCTCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 90 bp | GAGGCCGAGGCGGAGGCTGACGTGATGAGGAGCCGCTGGAAGCGGTaGGGCGGGCGACAGGGCACCTCCAGTCCGGCCGCCAGCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: EAEAEADVMRSRWKR*GGRQGTSSPAASLA Trigger: GGCCAAGCTGGCGGCCGGACTGGAGGTGCCCTGTCGCCCGCCCAACCGCTTCCAGCGGCTCCTCATCACGTCAGCCTCCGCCTCGGCCTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | GAGGCCGAGGCGGAGGCTGACGTGATGAGGAGCCGCTaGAAGCGGTTGGGCGGGCGACAGGGCACCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: EAEAEADVMRSR*KRLGGRQGTSS Trigger: ACTGGAGGTGCCCTGTCGCCCGCCCAACCGCTTCCAGCGGCTCCTCATCACGTCAGCCTCCGCCTCGGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 72 bp | GTCTCCACTTGTCCAGGGTGCATTCCAAGGGAGTTCTaGCACGTTCTGGGAGGAATCGGGGTGCGATCTAAA | + |
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Preference number: 6 (lower is better) Translates to: VSTCPGCIPREF*HVLGGIGVRSK Trigger: TTTAGATCGCACCCCGATTCCTCCCAGAACGTGGCAGAACTCCCTTGGAATGCACCCTGGACAAGTGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 72 bp | TCTGAAAAAGTGGGAGACGTCTCCACTTGTCCAGGGTaGATTCCAAGGGAGTTCTGCCACGTTCTGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SEKVGDVSTCPG*IPREFCHVLGG Trigger: TCCTCCCAGAACGTGGCAGAACTCCCTTGGAATGCACCCTGGACAAGTGGAGACGTCTCCCACTTTTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | TTTTTGGGAGGAGCTGACCATCGTTTGAGGACCTTGTaGAACGTGTACAGATGTGGCGCTGGGCTGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: FLGGADHRLRTL*NVYRCGAGLQR Trigger: ACGCTGCAGCCCAGCGCCACATCTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | ATATTTTTGGGAGGAGCTGACCATCGTTTGAGGACCTaGTTGAACGTGTACAGATGTGGCGCTGGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: IFLGGADHRLRT*LNVYRCGAGLQ Trigger: CTGCAGCCCAGCGCCACATCTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | TGTGGCGCTGGGCTGCAGCGTATATGTAACCTCAGTTaGAAATCTCTGCAGTACAGGAAATGGAACCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CGAGLQRICNLS*KSLQYRKWNPF Trigger: AAAGGGGTTCCATTTCCTGTACTGCAGAGATTTCCAACTGAGGTTACATATACGCTGCAGCCCAGCGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 72 bp | CACAGCTGTTGGATAGTAGGCTTGGGAGTACTGCGCTaGGGGTGTGTAGTTACTATATTTTTGGGAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: HSCWIVGLGVLR*GCVVTIFLGGA Trigger: AGCTCCTCCCAAAAATATAGTAACTACACACCCTCAGCGCAGTACTCCCAAGCCTACTATCCAACAGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | GCAGTACAGGAAATGGAACCCCTTTATCTGAAAAAGTaGGAGACGTCTCCACTTGTCCAGGGTGCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: AVQEMEPLYLKK*ETSPLVQGAFQ Trigger: TTGGAATGCACCCTGGACAAGTGGAGACGTCTCCCACTTTTTCAGATAAAGGGGTTCCATTTCCTGTACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | TGTTCTGAAGGCAAGATATTCTCCGAGGGATTGGTCTaGCATTTTATACTGCTATCCACCTGCGGTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CSEGKIFSEGLV*HFILLSTCGVL Trigger: CAGCACACCGCAGGTGGATAGCAGTATAAAATGCCAGACCAATCCCTCGGAGAATATCTTGCCTTCAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 90 bp | GTTACTATATTTTTGGGAGGAGCTGACCATCGTTTGAGGACCTTGTaGAACGTGTACAGATGTGGCGCTGGGCTGCAGCGTATATGTAAC | + |
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Preference number: 6 (lower is better) Translates to: VTIFLGGADHRLRTL*NVYRCGAGLQRICN Trigger: GTTACATATACGCTGCAGCCCAGCGCCACATCTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAATATAGTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 90 bp | GTAGTTACTATATTTTTGGGAGGAGCTGACCATCGTTTGAGGACCTaGTTGAACGTGTACAGATGTGGCGCTGGGCTGCAGCGTATATGT | + |
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Preference number: 6 (lower is better) Translates to: VVTIFLGGADHRLRT*LNVYRCGAGLQRIC Trigger: ACATATACGCTGCAGCCCAGCGCCACATCTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAATATAGTAACTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 72 bp | TACGTAGGAATAAGGAGACAAATTATCTCGCCGGAATaGCCGGTGAAATTGTCCTACAGCCACTGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: YVGIRRQIISPE*PVKLSYSHWSM Trigger: CATGGACCAGTGGCTGTAGGACAATTTCACCGGTCATTCCGGCGAGATAATTTGTCTCCTTATTCCTACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 72 bp | AAATCTCTGCAGTACAGGAAATGGAACCCCTTTATCTaGAAAAGTGGGAGACGTCTCCACTTGTCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: KSLQYRKWNPFI*KSGRRLHLSRV Trigger: CACCCTGGACAAGTGGAGACGTCTCCCACTTTTTCAGATAAAGGGGTTCCATTTCCTGTACTGCAGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | CCATTTGTTCTGAAGGCAAGATATTCTCCGAGGGATTaGTCTGGCATTTTATACTGCTATCCACCTGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: PFVLKARYSPRD*SGILYCYPPAV Trigger: CACCGCAGGTGGATAGCAGTATAAAATGCCAGACCAATCCCTCGGAGAATATCTTGCCTTCAGAACAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | CCCATTTGTTCTGAAGGCAAGATATTCTCCGAGGGATaGGTCTGGCATTTTATACTGCTATCCACCTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PICSEGKIFSEG*VWHFILLSTCG Trigger: ACCGCAGGTGGATAGCAGTATAAAATGCCAGACCAATCCCTCGGAGAATATCTTGCCTTCAGAACAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 90 bp | GATCTAAACCTTTCAGAGGGAAAGCGCTGTGGTTGTGGGATGAAGTaGATACGTAGGAATAAGGAGACAAATTATCTCGCCGGAATGACC | + |
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Preference number: 6 (lower is better) Translates to: DLNLSEGKRCGCGMK*IRRNKETNYLAGMT Trigger: GGTCATTCCGGCGAGATAATTTGTCTCCTTATTCCTACGTATCAACTTCATCCCACAACCACAGCGCTTTCCCTCTGAAAGGTTTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 72 bp | CTGAGGGTGTGTAGTTACTATATTTTTGGGAGGAGCTaGCCATCGTTTGAGGACCTTGTTGAACGTGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LRVCSYYIFGRS*PSFEDLVERVQ Trigger: CTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAATATAGTAACTACACACCCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 72 bp | AGATTGCATTGGAGGATTCTGGAAGTAATTACAGTGTaGATAGGAAGAGGCAGTAGGAGTGACACAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RLHWRILEVITV*IGRGSRSDTAA Trigger: AGCAGCTGTGTCACTCCTACTGCCTCTTCCTATGCACACTGTAATTACTTCCAGAATCCTCCAATGCAATCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | GCATTGTGCTATTTTCCAAAGGTTGAGCTGTGTGGATaGTATAGATGTACTCAGGTGACTGTGGTAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ALCYFPKVELCG*YRCTQVTVVES Trigger: GCTCTCTACCACAGTCACCTGAGTACATCTATACCATCCACACAGCTCAACCTTTGGAAAATAGCACAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | CTTTCAGAGGGAAAGCGCTGTGGTTGTGGGATGAAGTaGATACGTAGGAATAAGGAGACAAATTATCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LSEGKRCGCGMK*IRRNKETNYLA Trigger: GGCGAGATAATTTGTCTCCTTATTCCTACGTATCAACTTCATCCCACAACCACAGCGCTTTCCCTCTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | GTAGTTACTATATTTTTGGGAGGAGCTGACCATCGTTaGAGGACCTTGTTGAACGTGTACAGATGTGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: VVTIFLGGADHR*RTLLNVYRCGA Trigger: AGCGCCACATCTGTACACGTTCAACAAGGTCCTCAAACGATGGTCAGCTCCTCCCAAAAATATAGTAACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 90 bp | ATAAGGAATCCCATTTGTTCTGAAGGCAAGATATTCTCCGAGGGATaGGTCTGGCATTTTATACTGCTATCCACCTGCGGTGTGCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: IRNPICSEGKIFSEG*VWHFILLSTCGVLN Trigger: ATTCAGCACACCGCAGGTGGATAGCAGTATAAAATGCCAGACCAATCCCTCGGAGAATATCTTGCCTTCAGAACAAATGGGATTCCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS TCA 72 bp | ACGGAGATGGGTTATGATTTAGCTGCTCCTTCAGTTTaGCATGAGTTTGTTGGATGGTTGCAGATTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: TEMGYDLAAPSV*HEFVGWLQIPA Trigger: TGCAGGAATCTGCAACCATCCAACAAACTCATGTCAAACTGAAGGAGCAGCTAAATCATAACCCATCTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | CTAGCTGGAGTGGATAAACCTGTGTCTTTAGTAGACTaGTTAGCAGGCCCCATTTCTGAAATAAGGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: LAGVDKPVSLVD*LAGPISEIRNP Trigger: GGGATTCCTTATTTCAGAAATGGGGCCTGCTAACAAGTCTACTAAAGACACAGGTTTATCCACTCCAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 72 bp | GGCTGCAGCGTATATGTAACCTCAGTTGGAAATCTCTaGAGTACAGGAAATGGAACCCCTTTATCTGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GCSVYVTSVGNL*STGNGTPLSEK Trigger: TTTTTCAGATAAAGGGGTTCCATTTCCTGTACTGCAGAGATTTCCAACTGAGGTTACATATACGCTGCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS GCA 72 bp | CTGCTCCTTCAGTTTGACATGAGTTTGTTGGATGGTTaGAGATTCCTGCATTGTGCTATTTTCCAAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLQFDMSLLDG*RFLHCAIFQRL Trigger: CAACCTTTGGAAAATAGCACAATGCAGGAATCTGCAACCATCCAACAAACTCATGTCAAACTGAAGGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CCA 72 bp | AGCACTGCAAGGCCAATTAGAAGGCAGAAATTCAACTaGATAGGAAGATTGCATTGGAGGATTCTGGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: STARPIRRQKFN*IGRLHWRILEV Trigger: TACTTCCAGAATCCTCCAATGCAATCTTCCTATCCAGTTGAATTTCTGCCTTCTAATTGGCCTTGCAGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 90 bp | TCTCTGTATCTAGCTGGAGTGGATAAACCTGTGTCTTTAGTAGACTaGTTAGCAGGCCCCATTTCTGAAATAAGGAATCCCATTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLYLAGVDKPVSLVD*LAGPISEIRNPICS Trigger: AGAACAAATGGGATTCCTTATTTCAGAAATGGGGCCTGCTAACAAGTCTACTAAAGACACAGGTTTATCCACTCCAGCTAGATACAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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| CDS CAA 72 bp | CCAATTAGAAGGCAGAAATTCAACTGGATAGGAAGATaGCATTGGAGGATTCTGGAAGTAATTACAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PIRRQKFNWIGR*HWRILEVITVC Trigger: GCACACTGTAATTACTTCCAGAATCCTCCAATGCAATCTTCCTATCCAGTTGAATTTCTGCCTTCTAATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093956.4 |
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