Pregenerated sensors for HSF2BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002076Ensembl transcript IDs: ENSMUST00000002145.12, ENSMUST00000133308.3, ENSMUST00000238192.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATaGCTGCTCCCCTCCATGAATCGTAAGCGCTTTACCTCTACCTTG | + |
|
Preference number: 1 (lower is better) Translates to: HLPFTGSRPAQMVDP*LLPSMNRKRFTSTL Trigger: CAAGGTAGAGGTAAAGCGCTTACGATTCATGGAGGGGAGCAGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR GCA 90 bp | AACTCACTCTACAACACCACACACAGAGAAGCAGCTCAACATGTGTaGCGAGGCTGCCACTGCAAAGGGACACTTCCTCCCTCACAGGAT | + |
|
Preference number: 1 (lower is better) Translates to: NSLYNTTHREAAQHV*RGCHCKGTLPPSQD Trigger: ATCCTGTGAGGGAGGAAGTGTCCCTTTGCAGTGGCAGCCTCGGCACACATGTTGAGCTGCTTCTCTGTGTGTGGTGTTGTAGAGTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR CCA 90 bp | TTTTGTCCTCTGCCAGTATCTTTAAGCAGAAGCTACGTAGTGTCATaGCTGCATGAACAGCAGCCCACACATGCACAGGCACATGAGTGC | + |
|
Preference number: 1 (lower is better) Translates to: FCPLPVSLSRSYVVS*LHEQQPTHAQAHEC Trigger: GCACTCATGTGCCTGTGCATGTGTGGGCTGCTGTTCATGCAGCCATGACACTACGTAGCTTCTGCTTAAAGATACTGGCAGAGGACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR TCA 90 bp | AACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGAAGCTACTCTaGGAAAACACTTTGAGAGTTTCCATGCATTCAAAGGTGACATTT | + |
|
Preference number: 1 (lower is better) Translates to: NSHAAGSLRGSKKLL*ENTLRVSMHSKVTF Trigger: AAATGTCACCTTTGAATGCATGGAAACTCTCAAAGTGTTTTCTCAGAGTAGCTTCTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR TCA 90 bp | TCTCTAGTCCCTCAAGGCCTGCAATCTCTAACACATGACATACAGTaGCATCTAGTTTTGAACATGGAGTTAGAAGCCTGGGAGGGGATG | + |
|
Preference number: 1 (lower is better) Translates to: SLVPQGLQSLTHDIQ*HLVLNMELEAWEGM Trigger: CATCCCCTCCCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCACTGTATGTCATGTGTTAGAGATTGCAGGCCTTGAGGGACTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR GCA 90 bp | CCTGGGTCCTTTGGTACTCCCTACACTGCTCACAAAGGAAACCTGTaGATAGCAATTGTAGGAGAATCTGCCCAAAGATACTTGCTTAGA | + |
|
Preference number: 1 (lower is better) Translates to: PGSFGTPYTAHKGNL*IAIVGESAQRYLLR Trigger: TCTAAGCAAGTATCTTTGGGCAGATTCTCCTACAATTGCTATGCACAGGTTTCCTTTGTGAGCAGTGTAGGGAGTACCAAAGGACCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR GCA 90 bp | GAATTTAATCTCATAGTGTTCATCTTCAAGCTACCTTCCCACATTTaGTTTAAGTTCATAGTGAAGGGGCCAGAACAAAATAAGGAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: EFNLIVFIFKLPSHI*FKFIVKGPEQNKES Trigger: ACTTTCCTTATTTTGTTCTGGCCCCTTCACTATGAACTTAAAGCAAATGTGGGAAGGTAGCTTGAAGATGAACACTATGAGATTAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTCATGTGTGCCGAGGCTaGCACTGCAAAGGGACACTT | + |
|
Preference number: 2 (lower is better) Translates to: HSLTLHGEPPSTDGGPMPHVCRG*HCKGTL Trigger: AAGTGTCCCTTTGCAGTGGCAGCCTCGGCACACATG...AGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTAAGCCTGGGAGGGGATaGACCACTGGCATTTTCACC | + |
|
Preference number: 2 (lower is better) Translates to: HSLTLHGEPPSTDGGPMPKPGRG*TTGIFT Trigger: GGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTT...AGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGCACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCAGCTCAACATGTGTaGCGAGGCTGCCACTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CALTYPSRGAAQHRWWTHAAQHV*RGCHCK Trigger: TTTGCAGTGGCAGCCTCGGCACACATGTTGAGCTGC...ATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAAGCCTGGGAGGGGATaGACCACTGGCATTTTCACC | + |
|
Preference number: 2 (lower is better) Translates to: KPVRRGSSYQGKSTGHHRKPGRG*TTGIFT Trigger: GGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTT...TCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTTCCTGGGCAGCAGACTaGAGGTGGGAGTTGCGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SGKINQLPNKCALPGGRGSWAAD*RWELRL Trigger: GAGCCGCAACTCCCACCTGCAGTCTGCTGCCCAGGA...ACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAAAGGTTGGTAAGCCTGTaGGGAGGGGTTCCAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: GSSYQGKSTGHHRNASGKRLVSL*GGVPVT Trigger: GGTAACTGGAACCCCTCCGCACAGGCTTACCAACCT...TTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGCACATCTCCCTATTTGTGACAGGGCAGCATGTTGTCTTTTGTCCTCTGCCAAGGTTGGTAAGCCTGTaGGGAGGGGTTCCAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: PHISLFVTGQHVVFCPLPRLVSL*GGVPVT Trigger: GGTAACTGGAACCCCTCCGCACAGGCTTACCAACCT...TGGCAGAGGACAAAAGACAACATGCTGCCCTGTCACAAATAGGGAGATGTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGCACATCTCCCTATTTGTGACAGGGCAGCATGTTGTCTTTTGTCCTCTGCCAAAGCCTGGGAGGGGATaGACCACTGGCATTTTCACC | + |
|
Preference number: 2 (lower is better) Translates to: PHISLFVTGQHVVFCPLPKPGRG*TTGIFT Trigger: GGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTT...TGGCAGAGGACAAAAGACAACATGCTGCCCTGTCACAAATAGGGAGATGTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTTCTGAGAAAACACTTTaGGAGTTTCCATGCATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: HSLTLHGEPPSTDGGPMPSEKTL*EFPCIQ Trigger: TTGAATGCATGGAAACTCTCAAAGTGTTTTCTCAGA...AGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTCACAGAAATGCTTCTaGGAAACACTGACCATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: AEGFQLPGEEHRPSQKCFSQKCF*ETLTMV Trigger: CACCATGGTCAGTGTTTCCCAGAAGCATTTCTGTGA...GAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR CCA 90 bp | CATACAGTGACATCTAGTTTTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGAGCAGCAGACTGCAGGTaGGAGTTGCGGCTCTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: HTVTSSFEHGVRSLGGDGAADCR*ELRLLD Trigger: GTCCAAGAGCCGCAACTCCCACCTGCAGTCTGCTGC...TCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCACTGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCTGACCCATCATGTCCATGAAGAGGTAGGATGCTaGCCCATCATGTCCATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NKCALPGGRGRMLTHHVHEEVGC*PIMSIS Trigger: AGAGATGGACATGATGGGTCAGCATCCTACCTCTTC...ATGGACATGATGGGTCAGCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGATGGTGGACCCATGCCTGCTCCCCTCCATGAATCGTAAGCGCTTTACCAGCAAGAAGCTACTCTaGGAAAACACTTTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: AQMVDPCLLPSMNRKRFTSKKLL*ENTLRV Trigger: AACTCTCAAAGTGTTTTCTCAGAGTAGCTTCTTGCT...GGTAAAGCGCTTACGATTCATGGAGGGGAGCAGGCATGGGTCCACCATCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAACAGGCCATCACAGAAATaGTTCTGGGAAACACTGACC | + |
|
Preference number: 2 (lower is better) Translates to: VPVTRGRAQAITEMLLGNRPSQK*FWETLT Trigger: GGTCAGTGTTTCCCAGAAGCATTTCTGTGATGGCCT...GTTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTCTGGGAAACACTGACCATGGTGTTTAGTGATCTAAACTCCCATGCTGCAAGGTTGGTAAGCCTGTaGGGAGGGGTTCCAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: CFWETLTMVFSDLNSHAARLVSL*GGVPVT Trigger: GGTAACTGGAACCCCTCCGCACAGGCTTACCAACCT...TGCAGCATGGGAGTTTAGATCACTAAACACCATGGTCAGTGTTTCCCAGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGCTTAGAATGTGCTCAGAACAGAAGGGATGATCAAGCGCTCATGGCCATCCTAAGCTCAATGCCCTaGAGCAACTTGTCCTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TCLECAQNRRDDQALMAILSSMP*SNLSCQ Trigger: CTGGCAGGACAAGTTGCTGCAGGGCATTGAGCTTAG...GATGGCCATGAGCGCTTGATCATCCCTTCTGTTCTGAGCACATTCTAAGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTGCTCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAGCAATCTCTAACACATaGCATACAGTGACATCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: HCSGKINQLPNKCALPGGAISNT*HTVTSS Trigger: ACTAGATGTCACTGTATGTCATGTGTTAGAGATTGC...TCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGAGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGATCTGAGAAAACACTTTaGGAGTTTCCATGCATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GVPVTRGRAQAITEMLLGSEKTL*EFPCIQ Trigger: TTGAATGCATGGAAACTCTCAAAGTGTTTTCTCAGA...TCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATGCCCTGCAGCAACTTGTCCTGCCAGAGAAGGGATGGTGTATGCTGACTAGCAAGAAGCTACTCTaGGAAAACACTTTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LNALQQLVLPEKGWCMLTSKKLL*ENTLRV Trigger: AACTCTCAAAGTGTTTTCTCAGAGTAGCTTCTTGCT...AGTCAGCATACACCATCCCTTCTCTGGCAGGACAAGTTGCTGCAGGGCATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTGCTCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAACACATGACATACAGTaGCATCTAGTTTTGAACATG | + |
|
Preference number: 2 (lower is better) Translates to: HCSGKINQLPNKCALPGGTHDIQ*HLVLNM Trigger: CATGTTCAAAACTAGATGTCACTGTATGTCATGTGT...TCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGAGCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCTGACCCATCATGTCCATGCAATCTCTAACACATaGCATACAGTGACATCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: NKCALPGGRGRMLTHHVHAISNT*HTVTSS Trigger: ACTAGATGTCACTGTATGTCATGTGTTAGAGATTGC...ATGGACATGATGGGTCAGCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAAAGCAAGAAGCTACTCTaGGAAAACACTTTGAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSSYQGKSTGHHRNASGKSKKLL*ENTLRV Trigger: AACTCTCAAAGTGTTTTCTCAGAGTAGCTTCTTGCT...TTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATACTTGCTTAGAATGTGCTCAGAACAGAAGGGATGATCAAGCGCTCATGGACAGTGTTTCTCTGTaGAGCCCTTGCTGTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KDTCLECAQNRRDDQALMDSVSL*SPCCPG Trigger: TCCTGGACAGCAAGGGCTGCACAGAGAAACACTGTC...CATGAGCGCTTGATCATCCCTTCTGTTCTGAGCACATTCTAAGCAAGTATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTAGTGCTCCACAGACCCAAGCGGCCATGCCTTTCTCTTGAGTTCTTCATTCTACCTTCCCACATTTaGTTTAAGTTCATAGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ELVLHRPKRPCLSLEFFILPSHI*FKFIVK Trigger: CTTCACTATGAACTTAAAGCAAATGTGGGAAGGTAG...AATGAAGAACTCAAGAGAAAGGCATGGCCGCTTGGGTCTGTGGAGCACTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTTTCTCTTGAGTTCTTCATTCAACATAAAGCACACATCCTCTTACAAGAAGAAGAGGTAGGATGCTaGCCCATCATGTCCATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CLSLEFFIQHKAHILLQEEEVGC*PIMSIS Trigger: AGAGATGGACATGATGGGTCAGCATCCTACCTCTTC...TTCTTGTAAGAGGATGTGTGCTTTATGTTGAATGAAGAACTCAAGAGAAAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | TTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATaGCTGCTCCCCTCCATGAATCGTAAGCGCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: FTGSRPAQMVDP*LLPSMNRKRFT Trigger: GGTAAAGCGCTTACGATTCATGGAGGGGAGCAGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | ACACACAGAGAAGCAGCTCAACATGTGTGCCGAGGCTaGCACTGCAAAGGGACACTTCCTCCCTCACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: THREAAQHVCRG*HCKGTLPPSQD Trigger: ATCCTGTGAGGGAGGAAGTGTCCCTTTGCAGTGGCAGCCTCGGCACACATGTTGAGCTGCTTCTCTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR TCA 72 bp | ACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCTaGCCCATCATGTCCATCTCTAGTCCCTCAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSVHSQEEEVGC*PIMSISSPSRP Trigger: AGGCCTTGAGGGACTAGAGATGGACATGATGGGTCAGCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | ACTTCCTCCCTCACAGGATGTCTAAGCTCAATGCCCTaGAGCAACTTGTCCTGCCAGAGAAGGGATGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TSSLTGCLSSMP*SNLSCQRRDGV Trigger: TACACCATCCCTTCTCTGGCAGGACAAGTTGCTGCAGGGCATTGAGCTTAGACATCCTGTGAGGGAGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGTGCAGCCCTTGCTGTCCAGGAACTCACAAAGATCTGCTTGCCTCAGCCCTAGGTGAGGCCTTTTaGGTAGAGAAAGCTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLCSPCCPGTHKDLLASALGEAF*VEKAQQ Trigger: TTGCTGAGCTTTCTCTACCAAAAAGGCCTCACCTAG...GGCTGAGGCAAGCAGATCTTTGTGAGTTCCTGGACAGCAAGGGCTGCACAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR TCA 72 bp | GCTGCAGGCAGCCTCCGGGGCAGCAAGAAGCTACTCTaGGAAAACACTTTGAGAGTTTCCATGCATTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AAGSLRGSKKLL*ENTLRVSMHSK Trigger: CTTTGAATGCATGGAAACTCTCAAAGTGTTTTCTCAGAGTAGCTTCTTGCTGCCCCGGAGGCTGCCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR TCA 72 bp | GCAGCACCAAGACAGAGATCGACTGTCCGATGCATGTaGAATAGTAAGCGACAAAAGGCTAGGTTGGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AAPRQRSTVRCM*NSKRQKARLVS Trigger: GCTTACCAACCTAGCCTTTTGTCGCTTACTATTTCACATGCATCGGACAGTCGATCTCTGTCTTGGTGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR TCA 72 bp | CCACGTGGCTGGCGGTTTATTCTTATCTACACTAGGTaGGGCCTTTTTGGTAGAGAAAGCTCAGCAACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PRGWRFILIYTR*GLFGRESSATL Trigger: TAGGGTTGCTGAGCTTTCTCTACCAAAAAGGCCTCACCTAGTGTAGATAAGAATAAACCGCCAGCCACGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | CAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATaGTTCTGGGAAACACTGACCATGGTGTTTAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QLPGEEHRPSQK*FWETLTMVFSD Trigger: ATCACTAAACACCATGGTCAGTGTTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | TCTGCCGAGTTAGTGCTCCACAGACCCAAGCGGCCATaGCTTTCTCTTGAGTTCTTCATTCAACATAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SAELVLHRPKRP*LSLEFFIQHKA Trigger: TGCTTTATGTTGAATGAAGAACTCAAGAGAAAGGCATGGCCGCTTGGGTCTGTGGAGCACTAACTCGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR CCA 72 bp | CCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTaGGAAACACTGACCATGGTGTTTAGTGATCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGEEHRPSQKCF*ETLTMVFSDLN Trigger: GTTTAGATCACTAAACACCATGGTCAGTGTTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR TCA 72 bp | CCTCAAGGCCTGCAATCTCTAACACATGACATACAGTaGCATCTAGTTTTGAACATGGAGTTAGAAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PQGLQSLTHDIQ*HLVLNMELEAW Trigger: CCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCACTGTATGTCATGTGTTAGAGATTGCAGGCCTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | TTTGGTACTCCCTACACTGCTCACAAAGGAAACCTGTaGATAGCAATTGTAGGAGAATCTGCCCAAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: FGTPYTAHKGNL*IAIVGESAQRY Trigger: GTATCTTTGGGCAGATTCTCCTACAATTGCTATGCACAGGTTTCCTTTGTGAGCAGTGTAGGGAGTACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| 3UTR TCA 72 bp | ATCTCTAGTCCCTCAAGGCCTGCAATCTCTAACACATaGCATACAGTGACATCTAGTTTTGAACATGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ISSPSRPAISNT*HTVTSSFEHGV Trigger: AACTCCATGTTCAAAACTAGATGTCACTGTATGTCATGTGTTAGAGATTGCAGGCCTTGAGGGACTAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| 3UTR GCA 72 bp | CTCATAGTGTTCATCTTCAAGCTACCTTCCCACATTTaGTTTAAGTTCATAGTGAAGGGGCCAGAACAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LIVFIFKLPSHI*FKFIVKGPEQN Trigger: ATTTTGTTCTGGCCCCTTCACTATGAACTTAAAGCAAATGTGGGAAGGTAGCTTGAAGATGAACACTATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | CACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTTCCTGGGCAGCAGACTaGAGGTGGGAGTTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLTLHGEPPSTDGGPMPSWAAD*RWELRL Trigger: GAGCCGCAACTCCCACCTGCAGTCTGCTGCCCAGGA...AGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCAGCAGACTGCAGGTaGGAGTTGCGGCTCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CALTYPSRGAAQHRWWTHAADCR*ELRLLD Trigger: GTCCAAGAGCCGCAACTCCCACCTGCAGTCTGCTGC...ATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATAAGTCCCCCAGCAGCTaGAACATGGTGTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CALTYPSRGAAQHRWWTHKSPSS*NMVSRS Trigger: GCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTT...ATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTGCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGCTCCTGGAAGTCCCCCAGCAGCTaGAACATGGTGTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRSLGGDGPLAFSPGSWKSPSS*NMVSRS Trigger: GCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTT...CCAGGAGCCCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGCTCCTGGCGCGTCTGGATACTTTaGGTTTGGTGCACTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVRSLGGDGPLAFSPGSWRVWIL*VWCTGQ Trigger: CTGGCCAGTGCACCAAACTCAAAGTATCCAGACGCG...CCAGGAGCCCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| CDS-3UTR GCA 90 bp | GTAAGCCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGCCTGCTGGAGGAGCTaGTGTTTTGCCTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLCGGVPVTRGRAQAITACWRS*CFASFS Trigger: GCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGC...TGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGGCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | TCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTGCTGTGCAATACTCTGCCTaGTGGAGGAGCTGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTLHGEPPSTDGGPMPAVQYSA*WRSCCF Trigger: AAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCAC...AGCAGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGAAGCTACCAGCAGCTGCAACATaGTGTCCAGGAGCACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSDLNSHAAGSLRGSKKLPAAAT*CPGAPG Trigger: GCCGGGTGCTCCTGGACACCATGTTGCAGCTGCTGG...TAGCTTCTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGCTCCTGGGCTCAGAGGCCACCTTaGAGAAGACGTCTGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GVRSLGGDGPLAFSPGSWAQRPP*RRRLVL Trigger: TAGAACCAGACGTCTTCTCCAAGGTGGCCTCTGAGC...CCAGGAGCCCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | GCACAGATGGTGGACCCATGCCTGCTCCCCTCCATGAATCGTAAGCGCTTTACCAGAGGAGGGTACAGGTaGCAGCTCCCATTTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQMVDPCLLPSMNRKRFTRGGYR*QLPFVC Trigger: GCACACAAATGGGAGCTGTCACCTGTACCCTCCTCT...GGTAAAGCGCTTACGATTCATGGAGGGGAGCAGGCATGGGTCCACCATCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAACCCAGCAGCTGCAACATaGTGTCCAGGAGCACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVTRGRAQAITEMLLGNPAAAT*CPGAPG Trigger: GCCGGGTGCTCCTGGACACCATGTTGCAGCTGCTGG...GTTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATTTGTGTGCAATACTCTaGCTGCTGGAGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVRRGSSYQGKSTGHHRNLCAIL*LLEELL Trigger: CAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAA...ATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATCCAGGAGCACCCGGCTaGAATTCACCAAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVRRGSSYQGKSTGHHRNPGAPG*NSPRIH Trigger: GTGAATTCTTGGTGAATTCCAGCCGGGTGCTCCTGG...ATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAAGGGTAAGGAGCTCTaGAGCTCAGAGGCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVPVTRGRAQAITEMLLGKGKEL*SSEATL Trigger: CAAGGTGGCCTCTGAGCTCCAGAGCTCCTTACCCTT...TCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGAGGGTACAGGTaGCAGCTCCCATTTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSGKINQLPNKCALPGGRGGYR*QLPFVC Trigger: GCACACAAATGGGAGCTGTCACCTGTACCCTCCTCT...TCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAAGAAGTCCCGTATTTaGATCACTTCCGTCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVRRGSSYQGKSTGHHRKKSRI*ITSVVS Trigger: GCTGACGACGGAAGTGATGCAAATACGGGACTTCTT...TCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAAGTCCCCCAGCAGCTaGAACATGGTGTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKINQLPNKCALPGGRGKSPSS*NMVSRS Trigger: GCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTT...ACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGTGCAGCCCTTGCTGTCCAGGAACTCACAAAGATCTGCTTGCCTCAGCCGCTCAGAGGCCACCTTaGAGAAGACGTCTGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLCSPCCPGTHKDLLASAAQRPP*RRRLVL Trigger: TAGAACCAGACGTCTTCTCCAAGGTGGCCTCTGAGC...GGCTGAGGCAAGCAGATCTTTGTGAGTTCCTGGACAGCAAGGGCTGCACAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCACAGGATGTCTAAGCTCAATGCCCTGCAGCAACTTGTCCTGCCAGAGAAAGGGTAAGGAGCTCTaGAGCTCAGAGGCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTGCLSSMPCSNLSCQRKGKEL*SSEATL Trigger: CAAGGTGGCCTCTGAGCTCCAGAGCTCCTTACCCTT...TCTCTGGCAGGACAAGTTGCTGCAGGGCATTGAGCTTAGACATCCTGTGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | AGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCCTCCTAGAATGGTTTTaGCGACCTCCTCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLTSCLTSVHSQEEEVGCLLEWF*RPPRCW Trigger: CCAGCAGCGAGGAGGTCGTCAAAACCATTCTAGGAG...GCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GCACAGATGGTGGACCCATGCCTGCTCCCCTCCATGAATCGTAAGCGCTTTACCAAGAAGTCCCGTATTTaGATCACTTCCGTCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQMVDPCLLPSMNRKRFTKKSRI*ITSVVS Trigger: GCTGACGACGGAAGTGATGCAAATACGGGACTTCTT...GGTAAAGCGCTTACGATTCATGGAGGGGAGCAGGCATGGGTCCACCATCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCCTTGCTGTCCAGGAACTCACAAAGATCTGCTTGCCTCAGCCTCCCGATTTGCCTCATTCAGCTaGTGTCGAAGAGCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSPCCPGTHKDLLASASRFASFS*CRRANF Trigger: GAAGTTGGCTCTTCGACAGCAGCTGAATGAGGCAAA...TCGGGAGGCTGAGGCAAGCAGATCTTTGTGAGTTCCTGGACAGCAAGGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAAGCCTGCTGGAGGAGCTaGTGTTTTGCCTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSYQGKSTGHHRNASGKACWRS*CFASFS Trigger: GCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGC...TTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGTGCAATACTCTGCCTaGTGGAGGAGCTGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGVPVTRGRAQAITEMLLVQYSA*WRSCCF Trigger: AAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCAC...CAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | TTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGTTGTGTGCAATACTCTaGCTGCTGGAGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNMELEAWEGMDHWHFHRLCAIL*LLEELL Trigger: CAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAA...CCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTGCTAAACTCTCCATCGTCTaGCCAGTTATGTTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLTLHGEPPSTDGGPMPAKLSIV*PVMLKN Trigger: GTTTTTCAACATAACTGGCCAGACGATGGAGAGTTT...AGCAGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGAAGCTACCAGGAGCACCCGGCTaGAATTCACCAAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSDLNSHAAGSLRGSKKLPGAPG*NSPRIH Trigger: GTGAATTCTTGGTGAATTCCAGCCGGGTGCTCCTGG...TAGCTTCTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTGTTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGACACACTTCCGCGTCTaGATCACTCAAAAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MVFSDLNSHAAGSLRGSKTHFRV*ITQKPP Trigger: TGGTGGCTTTTGAGTGATCCAGACGCGGAAGTGTGT...CTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAACACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGTGTATGCTGACTTAAATGGACATCTCCTGCCGCACATCTCCCTATTTGCAGCAGACTGCAGGTaGGAGTTGCGGCTCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMVYADLNGHLLPHISLFAADCR*ELRLLD Trigger: GTCCAAGAGCCGCAACTCCCACCTGCAGTCTGCTGC...AAATAGGGAGATGTGCGGCAGGAGATGTCCATTTAAGTCAGCATACACCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | GTGACATCTAGTTTTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGACCACTGAGAGGAGGGTACAGGTaGCAGCTCCCATTTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSSFEHGVRSLGGDGPLRGGYR*QLPFVC Trigger: GCACACAAATGGGAGCTGTCACCTGTACCCTCCTCT...CAGTGGTCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGTTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGTTTGCCTCATTCAGCTaGTGTCGAAGAGCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MVFSDLNSHAAGSLRGSKFASFS*CRRANF Trigger: GAAGTTGGCTCTTCGACAGCAGCTGAATGAGGCAAA...CTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAACACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAACACTTTGTGTGCAATACTCTaGCTGCTGGAGGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVTRGRAQAITEMLLGNTLCAIL*LLEELL Trigger: CAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAA...AGTGTTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGACAGCTCCCATTTGTGTaGAATACTCTGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HCSGKINQLPNKCALPGGQLPFV*NTLPAG Trigger: TCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTG...TCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGAGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGCTCCTGGCCCCATTTAGTATTCTaGGTAAGAAGTCCCGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: GVRSLGGDGPLAFSPGSWPHLVF*VRSPVF Trigger: AAATACGGGACTTCTTACCCAGAATACTAAATGGGG...CCAGGAGCCCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGACATCCCCATCCAATaGCTTCACAAAACTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGVPVTRGRAQAITEMLLDIPIQ*LHKTLH Trigger: ATGGAGAGTTTTGTGAAGTCATTGGATGGGGATGTC...CAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTGTTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGGACATCCCCATCCAATaGCTTCACAAAACTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MVFSDLNSHAAGSLRGSKDIPIQ*LHKTLH Trigger: ATGGAGAGTTTTGTGAAGTCATTGGATGGGGATGTC...CTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAACACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGAAGAAGTCCCGTATTTaGATCACTTCCGTCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKINQLPNKCALPGGRGRKKSRI*ITSVVS Trigger: GCTGACGACGGAAGTGATGCAAATACGGGACTTCTT...CCTACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTTAGAATGTGCTCAGAACAGAAGGGATGATCAAGCGCTCATGGCCATCGCCTGCTGGAGGAGCTaGTGTTTTGCCTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLECAQNRRDDQALMAIACWRS*CFASFS Trigger: GCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGC...GATGGCCATGAGCGCTTGATCATCCCTTCTGTTCTGAGCACATTCTAAGCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | AACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCTGACCCATCATGTCCATGTGCAATACTCTGCCTaGTGGAGGAGCTGCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKCALPGGRGRMLTHHVHVQYSA*WRSCCF Trigger: AAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCAC...ATGGACATGATGGGTCAGCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAACACTCAGCTCCCATTTGTGTaGAATACTCTGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVTRGRAQAITEMLLGNTQLPFV*NTLPAG Trigger: TCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTG...AGTGTTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTCAGCTCCCATTTGTGTaGAATACTCTGCCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGKINQLPNKCALPGGRGQLPFV*NTLPAG Trigger: TCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTG...ACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | CACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTTACAATTCCAGCCAGTaGAAAGACAAATTGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLTLHGEPPSTDGGPMPYNSSQ*KDKLIF Trigger: GAAAATCAATTTGTCTTTGCACTGGCTGGAATTGTA...AGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | AAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCAATACTCTGCCTGCTaGAGGAGCTGCTGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KINQLPNKCALPGGRGRMQYSAC*RSCCFA Trigger: GGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTG...CATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGCTCCTGGTGGTTCTGGCCAGTTATGTTaGAAAACTTCAATGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEAWEGMDHWHFHRAPGGSGQLC*KTSMLC Trigger: ACAAAGCATTGAAGTTTTTCAACATAACTGGCCAGA...ACCACCAGGAGCCCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGCCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACATACAATTCCAGCCAGTaGAAAGACAAATTGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLCGGVPVTRGRAQAITYNSSQ*KDKLIF Trigger: GAAAATCAATTTGTCTTTGCACTGGCTGGAATTGTA...TGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGCAGGCAGATGGATGACCATTTAATGGAATTTAATCTCATAGTGTTCATCTCCTGGGCAGCAGACTaGAGGTGGGAGTTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECRQMDDHLMEFNLIVFISWAAD*RWELRL Trigger: GAGCCGCAACTCCCACCTGCAGTCTGCTGCCCAGGA...GATGAACACTATGAGATTAAATTCCATTAAATGGTCATCCATCTGCCTGCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTGGGAAACACTGACCATGGTGTTTAGTGATCTAAACTCCCATGCTGCACCAGGAGCACCCGGCTaGAATTCACCAAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFWETLTMVFSDLNSHAAPGAPG*NSPRIH Trigger: GTGAATTCTTGGTGAATTCCAGCCGGGTGCTCCTGG...TGCAGCATGGGAGTTTAGATCACTAAACACCATGGTCAGTGTTTCCCAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | AAAGATACTTGCTTAGAATGTGCTCAGAACAGAAGGGATGATCAAGCGCTCATGCTCCTAGAATGGTTTTaGCGACCTCCTCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDTCLECAQNRRDDQALMLLEWF*RPPRCW Trigger: CCAGCAGCGAGGAGGTCGTCAAAACCATTCTAGGAG...CATGAGCGCTTGATCATCCCTTCTGTTCTGAGCACATTCTAAGCAAGTATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | GGGATGGTGTATGCTGACTTAAATGGACATCTCCTGCCGCACATCTCCCTATTTTCAGCATTAGAACTTTaGGTTTGGTGCACTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GMVYADLNGHLLPHISLFSALEL*VWCTGQ Trigger: CTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGA...AAATAGGGAGATGTGCGGCAGGAGATGTCCATTTAAGTCAGCATACACCATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATGCCCTGCAGCAACTTGTCCTGCCAGAGAAGGGATGGTGTATGCTGACTCCCCATTTAGTATTCTaGGTAAGAAGTCCCGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LNALQQLVLPEKGWCMLTPHLVF*VRSPVF Trigger: AAATACGGGACTTCTTACCCAGAATACTAAATGGGG...AGTCAGCATACACCATCCCTTCTCTGGCAGGACAAGTTGCTGCAGGGCATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAAACTCTCCATCGTCTaGCCAGTTATGTTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSGKINQLPNKCALPGGKLSIV*PVMLKN Trigger: GTTTTTCAACATAACTGGCCAGACGATGGAGAGTTT...TCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGAGCAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTGGGAAACACTGACCATGGTGTTTAGTGATCTAAACTCCCATGCTGCAACACACTTCCGCGTCTaGATCACTCAAAAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CFWETLTMVFSDLNSHAATHFRV*ITQKPP Trigger: TGGTGGCTTTTGAGTGATCCAGACGCGGAAGTGTGT...TGCAGCATGGGAGTTTAGATCACTAAACACCATGGTCAGTGTTTCCCAGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGTCTGGCCAGTTATGTTaGAAAACTTCAATGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKINQLPNKCALPGGRGRSGQLC*KTSMLC Trigger: ACAAAGCATTGAAGTTTTTCAACATAACTGGCCAGA...CCTACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGTACAATTCCAGCCAGTaGAAAGACAAATTGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGVPVTRGRAQAITEMLLYNSSQ*KDKLIF Trigger: GAAAATCAATTTGTCTTTGCACTGGCTGGAATTGTA...CAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATACTTGCTTAGAATGTGCTCAGAACAGAAGGGATGATCAAGCGCTCATGCAATACTCTGCCTGCTaGAGGAGCTGCTGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDTCLECAQNRRDDQALMQYSAC*RSCCFA Trigger: GGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTG...CATGAGCGCTTGATCATCCCTTCTGTTCTGAGCACATTCTAAGCAAGTATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | CATCCTCTTACAAGAAAACGAACTCACTCTACAACACCACACACAGAGAAGCAGTCAGCATTAGAACTTTaGGTTTGGTGCACTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPLTRKRTHSTTPHTEKQSALEL*VWCTGQ Trigger: CTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGA...CTGCTTCTCTGTGTGTGGTGTTGTAGAGTGAGTTCGTTTTCTTGTAAGAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CCA 90 bp | CATACAGTGACATCTAGTTTTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGACCCCATTTAGTATTCTaGGTAAGAAGTCCCGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTVTSSFEHGVRSLGGDGPHLVF*VRSPVF Trigger: AAATACGGGACTTCTTACCCAGAATACTAAATGGGG...TCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCACTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCTCTTGAGTTCTTCATTCAACATAAAGCACACATCCTCTTACAAGAAGACATCCCCATCCAATaGCTTCACAAAACTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSLEFFIQHKAHILLQEDIPIQ*LHKTLH Trigger: ATGGAGAGTTTTGTGAAGTCATTGGATGGGGATGTC...TTCTTGTAAGAGGATGTGTGCTTTATGTTGAATGAAGAACTCAAGAGAAAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | CACTCACTTACCCTTCACGGGGAGCCGCCCAGCACAGATGGTGGACCCATGCCTGTTTCTAGCCGGGCTTaGAAGTGTTCACGGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: HSLTLHGEPPSTDGGPMPVSSRA*KCSRSI Trigger: AATGGACCGTGAACACTTCAAAGCCCGGCTAGAAAC...AGGCATGGGTCCACCATCTGTGCTGGGCGGCTCCCCGTGAAGGGTAAGTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | AGCCGCCCAGCACAGATGGTGGACCCATGCCTGCTCCCCTCCATGAATCGTAAGGGTGACAGCTCCCATTaGTGTGCAATACTCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRPAQMVDPCLLPSMNRKGDSSH*CAILCL Trigger: CAGGCAGAGTATTGCACACAAATGGGAGCTGTCACC...CTTACGATTCATGGAGGGGAGCAGGCATGGGTCCACCATCTGTGCTGGGCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGCTCCTGGTGGTAGCTCAGAGGCCACCTaGGAGAAGACGTCTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEAWEGMDHWHFHRAPGGSSEAT*EKTSGS Trigger: AGAACCAGACGTCTTCTCCAAGGTGGCCTCTGAGCT...ACCACCAGGAGCCCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CCA 90 bp | GTTTGGTGCACTGGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATaGTGTCCAGGAGCACCCGGCTGGAATTCACCAAGAATTCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: VWCTGQALSPPAAAT*CPGAPGWNSPRIHD Trigger: GTCGTGAATTCTTGGTGAATTCCAGCCGGGTGCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCCTTGCTGTCCAGGAACTCACAAAGATCTGCTTGCCTCAGCCTCCCGAGGAGGAGCTGCTGTTTaGCCTCATTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSPCCPGTHKDLLASASRGGAAV*PHSAAV Trigger: GACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCC...TCGGGAGGCTGAGGCAAGCAGATCTTTGTGAGTTCCTGGACAGCAAGGGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | GCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCCCTCCTAGAATGGTTTaGACGACCTCCTCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEGFQLPGEEHRPSQKCFPPRMV*TTSSLL Trigger: CAGCAGCGAGGAGGTCGTCAAAACCATTCTAGGAGG...GAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS GCA 90 bp | CCAGAGGAGGGTACAGGTGACAGCTCCCATTTGTGTGCAATACTCTaGCTGCTGGAGGAGCTGCTGTTTTGCCTCATTCAGCTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PEEGTGDSSHLCAIL*LLEELLFCLIQLLS Trigger: CGACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTGTCACCTGTACCCTCCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 90 bp | TTAAGTCCCCCAGCAGCTGCAACATGGTGTCCAGGAGCACCCGGCTaGAATTCACCAAGAATTCACGACCACACGCAATGGCGGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LSPPAAATWCPGAPG*NSPRIHDHTQWRQH Trigger: ATGTTGCCGCCATTGCGTGTGGTCGTGAATTCTTGGTGAATTCCAGCCGGGTGCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGTTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGGGAGGAGCTGCTGTTTaGCCTCATTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MVFSDLNSHAAGSLRGSKGGAAV*PHSAAV Trigger: GACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCC...CTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAACACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGTTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGCCTCCTAGAATGGTTTaGACGACCTCCTCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MVFSDLNSHAAGSLRGSKPPRMV*TTSSLL Trigger: CAGCAGCGAGGAGGTCGTCAAAACCATTCTAGGAGG...CTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAACACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS GCA 90 bp | ACTTTGAGTTTGGTGCACTGGCCAGGCTTTAAGTCCCCCAGCAGCTaGAACATGGTGTCCAGGAGCACCCGGCTGGAATTCACCAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSLVHWPGFKSPSS*NMVSRSTRLEFTKN Trigger: ATTCTTGGTGAATTCCAGCCGGGTGCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 90 bp | AGGGTACAGGTGACAGCTCCCATTTGTGTGCAATACTCTGCCTGCTaGAGGAGCTGCTGTTTTGCCTCATTCAGCTGCTGTCGAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVQVTAPICVQYSAC*RSCCFASFSCCRRA Trigger: GGCTCTTCGACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTGTCACCTGTACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAGGTGACAGCTCCCATTaGTGTGCAATACTCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVPVTRGRAQAITEMLLGGDSSH*CAILCL Trigger: CAGGCAGAGTATTGCACACAAATGGGAGCTGTCACC...TCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS GCA 90 bp | AGGAGGGTACAGGTGACAGCTCCCATTTGTGTGCAATACTCTGCCTaGTGGAGGAGCTGCTGTTTTGCCTCATTCAGCTGCTGTCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRVQVTAPICVQYSA*WRSCCFASFSCCRR Trigger: TCTTCGACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTGTCACCTGTACCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 90 bp | TATGAAGACACACTTCCGCGTCTGGATACTTTGAGTTTGGTGCACTaGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATGGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YEDTLPRLDTLSLVH*PGFKSPSSCNMVSR Trigger: CCTGGACACCATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTATCCAGACGCGGAAGTGTGTCTTCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| CDS-3UTR CAA 90 bp | TTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGCATTTTCACCGGGGTGACAGCTCCCATTaGTGTGCAATACTCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNMELEAWEGMDHWHFHRGDSSH*CAILCL Trigger: CAGGCAGAGTATTGCACACAAATGGGAGCTGTCACC...CCGGTGAAAATGCCAGTGGTCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | AGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCCCTCCTAGAATGGTTTaGACGACCTCCTCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLTSCLTSVHSQEEEVGCPPRMV*TTSSLL Trigger: CAGCAGCGAGGAGGTCGTCAAAACCATTCTAGGAGG...GCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGTGCGGAGGGGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAATCAGCATTAGAACTTaGAGTTTGGTGCACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPVRRGSSYQGKSTGHHRISIRT*SLVHWP Trigger: TGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGAT...TCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACCCCTCCGCACAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | AGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTAGGATGCAGCTCAGAGGCCACCTaGGAGAAGACGTCTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLTSCLTSVHSQEEEVGCSSEAT*EKTSGS Trigger: AGAACCAGACGTCTTCTCCAAGGTGGCCTCTGAGCT...GCATCCTACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGTGATCTAAACTCCCATGCTGCAGGCAGCCTCCGGGGCAGCAAGAAGCTAGTTTCTAGCCGGGCTTaGAAGTGTTCACGGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: FSDLNSHAAGSLRGSKKLVSSRA*KCSRSI Trigger: AATGGACCGTGAACACTTCAAAGCCCGGCTAGAAAC...TAGCTTCTTGCTGCCCCGGAGGCTGCCTGCAGCATGGGAGTTTAGATCACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 90 bp | ACATTATACAGGGACATCAGCATTAGAACTTTGAGTTTGGTGCACTaGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATGGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLYRDISIRTLSLVH*PGFKSPSSCNMVSR Trigger: CCTGGACACCATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | CATACAGTGACATCTAGTTTTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGAGGAGGAGCTGCTGTTTaGCCTCATTCAGCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HTVTSSFEHGVRSLGGDGGGAAV*PHSAAV Trigger: GACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCC...TCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCACTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGCCCTTGCTGTCCAGGAACTCACAAAGATCTGCTTGCCTCAGCCTCCCGAGTCTGGCCAGTTATGTaGAAAAACTTCAATGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSPCCPGTHKDLLASASRVWPVM*KNFNAL Trigger: CAAAGCATTGAAGTTTTTCAACATAACTGGCCAGAC...TCGGGAGGCTGAGGCAAGCAGATCTTTGTGAGTTCCTGGACAGCAAGGGCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CCA 90 bp | GGAGCACCCGGCTGGAATTCACCAAGAATTCACGACCACACGCAATaGCGGCAACATTTGTTACAATTCCAGCCAGTGCAAAGACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GAPGWNSPRIHDHTQ*RQHLLQFQPVQRQI Trigger: AATTTGTCTTTGCACTGGCTGGAATTGTAACAAATGTTGCCGCCATTGCGTGTGGTCGTGAATTCTTGGTGAATTCCAGCCGGGTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCCAGTTACCAGGGGAAGAGCACAGGCCATCACAGAAATGCTTCTGGGAAAATCAGCATTAGAACTTaGAGTTTGGTGCACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSYQGKSTGHHRNASGKISIRT*SLVHWP Trigger: TGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGAT...TTTCCCAGAAGCATTTCTGTGATGGCCTGTGCTCTTCCCCTGGTAACTGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGATCTGCTTGCCTCAGCCTCCCGAGTGCTGAGATAAAGGTGCGTCCCACCTTCAAGCCTTTTGAATaGATGCTCACATTATACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRSACLSLPSAEIKVRPTFKPFE*MLTLYR Trigger: CCTGTATAATGTGAGCATCAATTCAAAAGGCTTGAA...GGTGGGACGCACCTTTATCTCAGCACTCGGGAGGCTGAGGCAAGCAGATCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGCAAGATTAACCAGCTGCCTAACAAGTGTGCACTCCCAGGAGGAAGAGGTGTCTGGCCAGTTATGTaGAAAAACTTCAATGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGKINQLPNKCALPGGRGVWPVM*KNFNAL Trigger: CAAAGCATTGAAGTTTTTCAACATAACTGGCCAGAC...ACCTCTTCCTCCTGGGAGTGCACACTTGTTAGGCAGCTGGTTAATCTTGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | GTGACATCTAGTTTTGAACATGGAGTTAGAAGCCTGGGAGGGGATGGACCACTGGTCTGGCCAGTTATGTaGAAAAACTTCAATGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTSSFEHGVRSLGGDGPLVWPVM*KNFNAL Trigger: CAAAGCATTGAAGTTTTTCAACATAACTGGCCAGAC...CAGTGGTCCATCCCCTCCCAGGCTTCTAACTCCATGTTCAAAACTAGATGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS GCA 90 bp | ACGACCACACGCAATGGCGGCAACATTTGTTACAATTCCAGCCAGTaGAAAGACAAATTGATTTTCATCAGAATCAACCTCCTTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: TTTRNGGNICYNSSQ*KDKLIFIRINLLDI Trigger: GATGTCAAGGAGGTTGATTCTGATGAAAATCAATTTGTCTTTGCACTGGCTGGAATTGTAACAAATGTTGCCGCCATTGCGTGTGGTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGAAGAAAATTAAGGAGGCCATGATTTCCTATTGGACTTGCAGTGAAGAGTTCAAGCCTTTTGAATaGATGCTCACATTATACAGG | + |
|
Preference number: 5 (lower is better) Translates to: IQKKIKEAMISYWTCSEEFKPFE*MLTLYR Trigger: CCTGTATAATGTGAGCATCAATTCAAAAGGCTTGAA...CTCTTCACTGCAAGTCCAATAGGAAATCATGGCCTCCTTAATTTTCTTCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CCA 72 bp | ACTGGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATaGTGTCCAGGAGCACCCGGCTGGAATTCACCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TGQALSPPAAAT*CPGAPGWNSPR Trigger: TCTTGGTGAATTCCAGCCGGGTGCTCCTGGACACCATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS GCA 72 bp | CAGGTGACAGCTCCCATTTGTGTGCAATACTCTGCCTaGTGGAGGAGCTGCTGTTTTGCCTCATTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QVTAPICVQYSA*WRSCCFASFSC Trigger: GCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTGTCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 72 bp | ACACTTCCGCGTCTGGATACTTTGAGTTTGGTGCACTaGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATG | + |
|
Preference number: 6 (lower is better) Translates to: TLPRLDTLSLVH*PGFKSPSSCNM Trigger: CATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTATCCAGACGCGGAAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| CDS CAA 72 bp | GCAGGGTATGAAGACACACTTCCGCGTCTGGATACTTaGAGTTTGGTGCACTGGCCAGGCTTTAAGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGYEDTLPRLDT*SLVHWPGFKSP Trigger: GGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTATCCAGACGCGGAAGTGTGTCTTCATACCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| CDS TCA 72 bp | CAGGGTATGAAGACACACTTCCGCGTCTGGATACTTTaGGTTTGGTGCACTGGCCAGGCTTTAAGTCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGMKTHFRVWIL*VWCTGQALSPP Trigger: TGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTATCCAGACGCGGAAGTGTGTCTTCATACCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133308.3 |
||
| CDS CCA 72 bp | GTGACAGCTCCCATTTGTGTGCAATACTCTGCCTGCTaGAGGAGCTGCTGTTTTGCCTCATTCAGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VTAPICVQYSAC*RSCCFASFSCC Trigger: ACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAAATGGGAGCTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CAA 72 bp | GTGTGCAATACTCTGCCTGCTGGAGGAGCTGCTGTTTaGCCTCATTCAGCTGCTGTCGAAGAGCCAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCNTLPAGGAAV*PHSAAVEEPTS Trigger: AGAAGTTGGCTCTTCGACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CAA 90 bp | CTCCCATTTGTGTGCAATACTCTGCCTGCTGGAGGAGCTGCTGTTTaGCCTCATTCAGCTGCTGTCGAAGAGCCAACTTCTCCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPFVCNTLPAGGAAV*PHSAAVEEPTSPSS Trigger: AGAAGAAGGAGAAGTTGGCTCTTCGACAGCAGCTGAATGAGGCAAAACAGCAGCTCCTCCAGCAGGCAGAGTATTGCACACAAATGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 72 bp | AGGGACATCAGCATTAGAACTTTGAGTTTGGTGCACTaGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATG | + |
|
Preference number: 6 (lower is better) Translates to: RDISIRTLSLVH*PGFKSPSSCNM Trigger: CATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CCA 72 bp | GATGAGCCGCAGGGTATGAAGACACACTTCCGCGTCTaGATCACTCAAAAGCCACCACAGCAAAGGGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: DEPQGMKTHFRV*ITQKPPQQRDK Trigger: TTTATCCCTTTGCTGTGGTGGCTTTTGAGTGATCCAGACGCGGAAGTGTGTCTTCATACCCTGCGGCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS GCA 72 bp | TCCCCATTTAGTATTCTGGGTAAGAAGTCCCGTATTTaGATCACTTCCGTCGTCAGCCGTTCCAGGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPFSILGKKSRI*ITSVVSRSRSF Trigger: GAAGGACCTGGAACGGCTGACGACGGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS TCA 72 bp | TCCCACTGTCTGCCTGTGCAGTTTCTAGCCGGGCTTTaGAGTGTTCACGGTCCATTATCAGTTGCTCTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SHCLPVQFLAGL*SVHGPLSVALI Trigger: AATTAGAGCAACTGATAATGGACCGTGAACACTTCAAAGCCCGGCTAGAAACTGCACAGGCAGACAGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 72 bp | GGCTGGAATTCACCAAGAATTCACGACCACACGCAATaGCGGCAACATTTGTTACAATTCCAGCCAGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GWNSPRIHDHTQ*RQHLLQFQPVQ Trigger: TTGCACTGGCTGGAATTGTAACAAATGTTGCCGCCATTGCGTGTGGTCGTGAATTCTTGGTGAATTCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CAA 72 bp | ACATTATACAGGGACATCAGCATTAGAACTTTGAGTTaGGTGCACTGGCCAGGCTTTAAGTCCCCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLYRDISIRTLS*VHWPGFKSPSS Trigger: GCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CAA 90 bp | TTGATGCTCACATTATACAGGGACATCAGCATTAGAACTTTGAGTTaGGTGCACTGGCCAGGCTTTAAGTCCCCCAGCAGCTGCAACATG | + |
|
Preference number: 6 (lower is better) Translates to: LMLTLYRDISIRTLS*VHWPGFKSPSSCNM Trigger: CATGTTGCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGTGAGCATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CAA 90 bp | TTTGAATTGATGCTCACATTATACAGGGACATCAGCATTAGAACTTaGAGTTTGGTGCACTGGCCAGGCTTTAAGTCCCCCAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FELMLTLYRDISIRT*SLVHWPGFKSPSSC Trigger: GCAGCTGCTGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGTGAGCATCAATTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS TCA 72 bp | TGCTCACATTATACAGGGACATCAGCATTAGAACTTTaGGTTTGGTGCACTGGCCAGGCTTTAAGTCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSHYTGTSALEL*VWCTGQALSPP Trigger: TGGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGTGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CAA 72 bp | ATGCTCACATTATACAGGGACATCAGCATTAGAACTTaGAGTTTGGTGCACTGGCCAGGCTTTAAGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLTLYRDISIRT*SLVHWPGFKSP Trigger: GGGGGACTTAAAGCCTGGCCAGTGCACCAAACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGTGAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS TCA 72 bp | TTCATCAGAATCAACCTCCTTGACATCCCCATCCAATaGCTTCACAAAACTCTCCATCGTCTGGCCAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FIRINLLDIPIQ*LHKTLHRLASY Trigger: ATAACTGGCCAGACGATGGAGAGTTTTGTGAAGTCATTGGATGGGGATGTCAAGGAGGTTGATTCTGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CCA 72 bp | TCTGGAAACTTTCCAGTAACTCCCCATTTAGTATTCTaGGTAAGAAGTCCCGTATTTGCATCACTTCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGNFPVTPHLVF*VRSPVFASLPS Trigger: CGACGGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAATGGGGAGTTACTGGAAAGTTTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS TCA 72 bp | ACTTCACAAAACTCTCCATCGTCTGGCCAGTTATGTTaGAAAACTTCAATGCTTTGTCTCCTCCTAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: TSQNSPSSGQLC*KTSMLCLLLEW Trigger: CCATTCTAGGAGGAGACAAAGCATTGAAGTTTTTCAACATAACTGGCCAGACGATGGAGAGTTTTGTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS GCA 72 bp | CGCAATGGCGGCAACATTTGTTACAATTCCAGCCAGTaGAAAGACAAATTGATTTTCATCAGAATCAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RNGGNICYNSSQ*KDKLIFIRINL Trigger: GAGGTTGATTCTGATGAAAATCAATTTGTCTTTGCACTGGCTGGAATTGTAACAAATGTTGCCGCCATTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002145.12 ENSMUST00000133308.3 ENSMUST00000238192.2 |
||
| CDS CAA 72 bp | CCAGGACTCTCAGTGATGTATTTCAAGCCTTTTGAATaGATGCTCACATTATACAGGGACATCAGCATTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLSVMYFKPFE*MLTLYRDISIR Trigger: TCTAATGCTGATGTCCCTGTATAATGTGAGCATCAATTCAAAAGGCTTGAAATACATCACTGAGAGTCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||
| CDS CAA 90 bp | GGGATAAATCCAGGACTCTCAGTGATGTATTTCAAGCCTTTTGAATaGATGCTCACATTATACAGGGACATCAGCATTAGAACTTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GINPGLSVMYFKPFE*MLTLYRDISIRTLS Trigger: ACTCAAAGTTCTAATGCTGATGTCCCTGTATAATGTGAGCATCAATTCAAAAGGCTTGAAATACATCACTGAGAGTCCTGGATTTATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002145.12 ENSMUST00000238192.2 |
||