Pregenerated sensors for HSDL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028383Ensembl transcript IDs: ENSMUST00000030078.12, ENSMUST00000107528.8, ENSMUST00000128792.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGTTCACCCAACCCTCATaGAACTGTCTTTGTGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGFTQPS*NCLCGD Trigger: ATCTCCACAAAGACAGTTGCATGAGGGTTGGGTGAA...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR-3UTR TCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGCAAGAAAGCAATGAATaGAATAAAGGCATAGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGQESNE*NKGIER Trigger: CCTCTCTATGCCTTTATTTCATTCATTGCTTTCTTG...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGAAAACCGCCAGGTGGTaGTGGAGCACACCTTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: IKPGIVSHVYNNSTKKTEKTARW*WSTPSV Trigger: GACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGCCAATTGGTTGTTCATaGTACATACTTTTCTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: IKPGIVSHVYNNSTKKTEPIGCS*YILFCK Trigger: CTTGCAGAAAAGTATGTATCATGAACAACCAATTGG...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGCGCCTGCAAGTATTATaGACTGAAGTTCATAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: IKPGIVSHVYNNSTKKTERLQVL*TEVHKT Trigger: TGTTTTATGAACTTCAGTGCATAATACTTGCAGGCG...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR TCA 72 bp | CAAAGCACTCAGGAGGCAGGGGCAGGCAGACCTCTGTaGGTTCGTGCCCAGCCTAGTCTACAGGGTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QSTQEAGAGRPL*VRAQPSLQGES Trigger: GGACTCACCCTGTAGACTAGGCTGGGCACGAACTCACAGAGGTCTGCCTGCCCCTGCCTCCTGAGTGCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR TCA 72 bp | ATAATAATAGCACTAAGAAAACTGAGGCAGGAGGACTaGCCCCAGTTTAAGGCCAGTTGGGTTAACCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: IIIALRKLRQED*PQFKASWVNPF Trigger: AAATGGGTTAACCCAACTGGCCTTAAACTGGGGTCAGTCCTCCTGCCTCAGTTTTCTTAGTGCTATTATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| 3UTR GCA 72 bp | AAAGAAATGATACTGCAGTTCTTCACCCAACCCTCATaGAACTGTCTTTGTGGAGATAAAGTAGCTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: KEMILQFFTQPS*NCLCGDKVASF Trigger: AAATGAAGCTACTTTATCTCCACAAAGACAGTTGCATGAGGGTTGGGTGAAGAACTGCAGTATCATTTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGAGCTGTGGCTGCTCCTaGAGCTGTGGCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGSCGCS*SCGFSC Trigger: GCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCT...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGTGCTGTGGCTGCTCCTaGAGCTGTGGCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGCCGCS*SCGFSC Trigger: GCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCA...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGTGTGGCTGTTCCCGTTaGTGTGGCTGCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGCGCSR*CGCSCS Trigger: GCTGCAGGAGCAGCCACAGCAACGGGAACAGCCACA...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGCCGTGGCTGCTGCTaGAGCTGTGGCTGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTARWWWSTPSVKALRRQGRGCC*SCGCSR Trigger: ACGGGAACAGCCACAGCTGCAGCAGCAGCCACGGCC...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGACTCATCACCACGTCTaGCCGGTCAGAGGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPPGGGGAHLQSKHSGGRTHHHV*PVRGLS Trigger: GGAGAGCCCTCTGACCGGGCAGACGTGGTGATGAGT...CCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGAGCTGTGGCTGCTCCTaGAGCTGTGGCTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGGGGAHLQSKHSGGRSCGCS*SCGCFC Trigger: ACAGAAGCAGCCACAGCTGCAGGAGCAGCCACAGCT...CCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGAAGCACAGTGCTGTTTaGACCACAGTGGGTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGKHSAV*TTVGLG Trigger: ACCTAAACCCACTGTGGTTCAAACAGCACTGTGCTT...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGGCCAATGCCTCGGCTTaGACCTGTGATAAAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGANASA*TCDKNC Trigger: ACAGTTTTTATCACAGGTGCAAGCCGAGGCATTGGC...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR GCA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGAGCTGTGACTCCTCCTaGAGCTGCAGCTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTARWWWSTPSVKALRRQSCDSS*SCSFSS Trigger: AGAAGAGAAGCTGCAGCTGCAGGAGGAGTCACAGCT...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGTCCATAGCAGCAGTGTaGATGGCTGTTCTAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTARWWWSTPSVKALRRQSIAAV*MAVLGH Trigger: ATGGCCTAGAACAGCCATTCACACTGCTGCTATGGA...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGTGGCACAGAGTCATTTaGTTCTTTCTCCTCCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGWHRVI*FFLLHN Trigger: GTTATGGAGGAGAAAGAATCAAATGACTCTGTGCCA...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGTGTGGTAGCATTGACTaGACAAATGGCTGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTARWWWSTPSVKALRRQCGSID*TNGCGC Trigger: ACAGCCACAGCCATTTGTGCAGTCAATGCTACCACA...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGATGCAGCGTCCGCAATaGTGTCAACTTTTCTACATT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGGGGAHLQSKHSGGRMQRPQ*CQLFYI Trigger: AATGTAGAAAAGTTGACATCATTGCGGACGCTGCAT...CCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGAATCTTCAACTTTCCTaGCATAAATGCCATGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGNLQLS*HKCHGW Trigger: CCAACCATGGCATTTATGTCAGGAAAGTTGAAGATT...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTTGCTGTGGCTGCTCCTaGAGCTGTGGCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVSPKPVRVTERNDTCCGCS*SCGFSC Trigger: GCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCA...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTGGCCGTGGCTGCTGCTaGAGCTGTGGCTGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTGRGCC*SCGCSR Trigger: ACGGGAACAGCCACAGCTGCAGCAGCAGCCACGGCC...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTCTGTTCCCGTTGCTGTaGCTGCTCCTGCAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVSPKPVRVTERNDTLFPLL*LLLQLW Trigger: CCACAGCTGCAGGAGCAGCCACAGCAACGGGAACAG...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGTGGCACAGAGTCATTTaGTTCTTTCTCCTCCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTARWWWSTPSVKALRRQWHRVI*FFLLHN Trigger: GTTATGGAGGAGAAAGAATCAAATGACTCTGTGCCA...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CCA 90 bp | AAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGTGCCATATTTGGCAATaGTATAAGCACAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGGGGAHLQSKHSGGRCHIWQ*YKHSAV Trigger: AACAGCACTGTGCTTATACCATTGCCAAATATGGCA...CCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGTTAGCTTCTCCAATTTaGTTGCTAGGGCTATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTARWWWSTPSVKALRRQLASPI*LLGLCF Trigger: GAAACATAGCCCTAGCAATCAAATTGGAGAAGCTAA...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGACGTGGCCGTGGCTGCTaGTGCAGCTGTGGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRRGRGC*CSCGCS Trigger: GGAACAGCCACAGCTGCAGCAGCAGCCACGGCCACG...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTACTCATCACCACGTCTaGCCGGTCAGAGGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTTHHHV*PVRGLS Trigger: GGAGAGCCCTCTGACCGGGCAGACGTGGTGATGAGT...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTCTGTTCCCGTTGCTGTaGCTGCTCCTGCAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTLFPLL*LLLQLW Trigger: CCACAGCTGCAGGAGCAGCCACAGCAACGGGAACAG...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGACTGTGGCTGTTGCCGTaGCCGTGGCTGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRLWLLP*PWLLLQ Trigger: CTGCAGCAGCAGCCACGGCCACGGCAACAGCCACAG...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTAGCTGTGGCTGCTCCTaGAGCTGTGGCTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTSCGCS*SCGCFC Trigger: ACAGAAGCAGCCACAGCTGCAGGAGCAGCCACAGCT...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGAAGCTGTGGCTTCTCCTaGAGCTGTGGCTGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRSCGFS*SCGCSC Trigger: GCAGGAGCAGCCACAGCTGCAGGAGAAGCCACAGCT...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGAAGCTGTGGCTGCTCCTaGAGCTGTGGCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRSCGCS*SCGFSC Trigger: GCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCT...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGATCCCGTTGCTGTGGCTaGTCCTGCAGCTGTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRSRCCG*SCSCGF Trigger: GAAGCCACAGCTGCAGGAGCAGCCACAGCAACGGGA...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGCGTGGCCGTGGCTGCTaGTGCAGCTGTGGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTERGRGC*CSCGCS Trigger: GGAACAGCCACAGCTGCAGCAGCAGCCACGGCCACG...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTTGTGGTAGCATTGACTaGACAAATGGCTGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVSPKPVRVTERNDTCGSID*TNGCGC Trigger: ACAGCCACAGCCATTTGTGCAGTCAATGCTACCACA...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTACCACCATCTTCACCTaGGAGTTCAAACTGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVSPKPVRVTERNDTTTIFT*EFKLID Trigger: GTCTATCAGTTTGAACTCTCAGGTGAAGATGGTGGT...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTGGCTTTCAAGGCAATTaGTTTGCCAATGCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTGFQGN*FANASA Trigger: AGCCGAGGCATTGGCAAAGCAATTGCCTTGAAAGCC...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGTCCCGTTGCTGTGGCTaGTCCTGCAGCTGTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTESRCCG*SCSCGF Trigger: GAAGCCACAGCTGCAGGAGCAGCCACAGCAACGGGA...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGTGTGGCTGTTCCCGTTaGTGTGGCTGCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTECGCSR*CGCSCS Trigger: GCTGCAGGAGCAGCCACAGCAACGGGAACAGCCACA...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTAAGCACAGTGCTGTTTaGACCACAGTGGGTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTKHSAV*TTVGLG Trigger: ACCTAAACCCACTGTGGTTCAAACAGCACTGTGCTT...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGATCCATAGCAGCAGTGTaGATGGCTGTTCTAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRSIAAV*MAVLGH Trigger: ATGGCCTAGAACAGCCATTCACACTGCTGCTATGGA...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTACCACCATCTTCACCTaGGAGTTCAAACTGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTTTIFT*EFKLID Trigger: GTCTATCAGTTTGAACTCTCAGGTGAAGATGGTGGT...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTTTAGCTTCTCCAATTTaGTTGCTAGGGCTATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVSPKPVRVTERNDTLASPI*LLGLCF Trigger: GAAACATAGCCCTAGCAATCAAATTGGAGAAGCTAA...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTACTGCACTGTTGATTTaGTGTTCATCTCTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVSPKPVRVTERNDTTALLI*CSSLTS Trigger: TGATGTGAGAGATGAACAGCAAATCAACAGTGCAGT...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGAGCTGTGACTCCTCCTaGAGCTGCAGCTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTESCDSS*SCSFSS Trigger: AGAAGAGAAGCTGCAGCTGCAGGAGGAGTCACAGCT...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGTCAAGGCAATTGCTTTaGCAATGCCTCGGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTESRQLL*QCLGLH Trigger: GTGCAAGCCGAGGCATTGGCAAAGCAATTGCCTTGA...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR TCA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTAACTTTTTGGCCTTTTaGAAATGGAATATGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHDSGGDNRFLTAELFTNFLAF*KWNMQR Trigger: ACGCTGCATATTCCATTTTCAAAAGGCCAAAAAGTT...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGTGCCATATTTGGCAATaGTATAAGCACAGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTECHIWQ*YKHSAV Trigger: AACAGCACTGTGCTTATACCATTGCCAAATATGGCA...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGAACTTTTTGGCCTTTTaGAAATGGAATATGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTENFLAF*KWNMQR Trigger: ACGCTGCATATTCCATTTTCAAAAGGCCAAAAAGTT...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGATGACCTGGTGCAATTaGGTAGACATCAAAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKPGIVSHVYNNSTKKTEMTWCN*VDIKIF Trigger: AAAAATTTTGATGTCTACGCAATTGCACCAGGTCAT...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CCA 90 bp | CCGTGGCCGTGGCTGCTGCTGCAGCTGTGGCTGTTCCCGTTGCTGTaGCTGCTCCTGCAGCTGTGGCTTCTCCTGCAGCTGTGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PWPWLLLQLWLFPLL*LLLQLWLLLQLWLL Trigger: GAGCAGCCACAGCTGCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCAACGGGAACAGCCACAGCTGCAGCAGCAGCCACGGCCACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CCA 90 bp | CCGTTGCTGTGGCTGCTCCTGCAGCTGTGGCTTCTCCTGCAGCTGTaGCTGCTCCTGCAGCTGTGGCTTCTCCTGCAGCTGTGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLWLLLQLWLLLQL*LLLQLWLLLQLWLL Trigger: GAGAAGCCACAGCTGCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCTGCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCAACGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CCA 90 bp | CTGCAGCTGTGGCTGTTCCCGTTGCTGTGGCTGCTCCTGCAGCTGTaGCTTCTCCTGCAGCTGTGGCTGCTCCTGCAGCTGTGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLWLFPLLWLLLQL*LLLQLWLLLQLWLL Trigger: GAGAAGCCACAGCTGCAGGAGCAGCCACAGCTGCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCAACGGGAACAGCCACAGCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS GCA 90 bp | CGTCTGCCCGGTCAGAGGGCTCTCCGTGTCCAACCTTCCCGCCTTTaGTCTTTAGATCAAGAAACCACGTACCACCATCTTCACCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLPGQRALRVQPSRL*SLDQETTYHHLHLR Trigger: TCTCAGGTGAAGATGGTGGTACGTGGTTTCTTGATCTAAAGAGCAAAGGCGGGAAGGTTGGACACGGAGAGCCCTCTGACCGGGCAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | AAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGCACTGCACTGTTGATTaGCTGTTCATCTCTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: KPPGGGGAHLQSKHSGGRHCTVD*LFISHI Trigger: GATGTGAGAGATGAACAGCAAATCAACAGTGCAGTG...CCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR CAA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTCTGTGGCTGTTCCCGTaGCTGTGGCTGCTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVYRVSPKPVRVTERNDTLWLFP*LWLLLQ Trigger: CTGCAGGAGCAGCCACAGCAACGGGAACAGCCACAG...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | AAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGTTTTTGTGGTAGCATaGACTGCACAAATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KPPGGGGAHLQSKHSGGRVFVVA*TAQMAV Trigger: CACAGCCATTTGTGCAGTCAATGCTACCACAAAAAC...CCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS GCA 90 bp | AAACATTTTGACAAAATCATCAGTGGCCATACTCATCACCACGTCTaGCCGGTCAGAGGGCTCTCCGTGTCCAACCTTCCCGCCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KHFDKIISGHTHHHV*PVRGLSVSNLPAFA Trigger: AGCAAAGGCGGGAAGGTTGGACACGGAGAGCCCTCTGACCGGGCAGACGTGGTGATGAGTATGGCCACTGATGATTTTGTCAAAATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | AACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGGGTCAACTTTTCTACATaGGTTTTCAACACCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: NRQVVVEHTFSQSTQEAGVNFST*VFNTRS Trigger: GGATCTGGTGTTGAAAACCAATGTAGAAAAGTTGAC...CCCTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS TCA 90 bp | TTGTGCCGAGGAGTTTCGGGTGCTTTTGGGTGGTCTTCGCAGCAATaGCAATATTGGCTCCATCCTTTGCGGCTTTCAAGGCAATTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCRGVSGAFGWSSQQ*QYWLHPLRLSRQLL Trigger: AAGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATATTGTCATTGCTGCGAAGACCACCCAAAAGCACCCGAAACTCCTCGGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR CAA 90 bp | AAAACCGCCAGGTGGTGGTGGAGCACACCTTCAGTCAAAGCACTCAGGAGGCAGGTCAACTTTTCTACATaGGTTTTCAACACCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: KTARWWWSTPSVKALRRQVNFST*VFNTRS Trigger: GGATCTGGTGTTGAAAACCAATGTAGAAAAGTTGAC...CTGCCTCCTGAGTGCTTTGACTGAAGGTGTGCTCCACCACCACCTGGCGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTCGGCTTTCAAGGCAATaGCTTTGCCAATGCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHDSGGDNRFLTAELFTRLSRQ*LCQCLG Trigger: GCCGAGGCATTGGCAAAGCAATTGCCTTGAAAGCCG...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS GCA 90 bp | AGCAATGACAATATTGGCTCCATCCTTTGCGGCTTTCAAGGCAATTaGTTTGCCAATGCCTCGGCTTGCACCTGTGATAAAAACTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNDNIGSILCGFQGN*FANASACTCDKNCA Trigger: TGCACAGTTTTTATCACAGGTGCAAGCCGAGGCATTGGCAAAGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATATTGTCATTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGCTGTGGCTGTTCCCGTaGCTGTGGCTGCTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IKPGIVSHVYNNSTKKTELWLFP*LWLLLQ Trigger: CTGCAGGAGCAGCCACAGCAACGGGAACAGCCACAG...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTCTAGGCCATAAGGCATaGACTGCAATTTCACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LVYRVSPKPVRVTERNDTLGHKA*TAISPL Trigger: TAGAGGTGAAATTGCAGTCAATGCCTTATGGCCTAG...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCTAGAACAAACTTATATGTCCTTACATGACAGTGGGGGAGACAACAGAGCAGCAATGACAATATaGGCTCCATCCTTTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FFLEQTYMSLHDSGGDNRAAMTI*APSFAA Trigger: AGCCGCAAAGGATGGAGCCAATATTGTCATTGCTGC...TCTGTTGTCTCCCCCACTGTCATGTAAGGACATATAAGTTTGTTCTAGAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR CAA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTGTTTTTGTGGTAGCATaGACTGCACAAATGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLHDSGGDNRFLTAELFTVFVVA*TAQMAV Trigger: CACAGCCATTTGTGCAGTCAATGCTACCACAAAAAC...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTCTACAGGGTGAGTCCCAAGCCAGTCAGGGTTACAGAAAGAAATGATACTATTAGCTTCTCCAATTaGATTGCTAGGGCTATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVYRVSPKPVRVTERNDTISFSN*IARAMF Trigger: AAACATAGCCCTAGCAATCAAATTGGAGAAGCTAAT...AGTATCATTTCTTTCTGTAACCCTGACTGGCTTGGGACTCACCCTGTAGACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCCAGGCATTGTGTCTCATGTCTATAATAATAGCACTAAGAAAACTGAGTATTGGCTCCATCCTTaGCGGCTTTCAAGGCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: IKPGIVSHVYNNSTKKTEYWLHP*RLSRQL Trigger: CAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATA...CTCAGTTTTCTTAGTGCTATTATTATAGACATGAGACACAATGCCTGGCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS-3UTR CAA 90 bp | TCCTTACATGACAGTGGGGGAGACAACAGATTTCTAACTGCTGAGCTTTTTACTATTAGCTTCTCCAATTaGATTGCTAGGGCTATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHDSGGDNRFLTAELFTISFSN*IARAMF Trigger: AAACATAGCCCTAGCAATCAAATTGGAGAAGCTAAT...AGTAAAAAGCTCAGCAGTTAGAAATCTGTTGTCTCCCCCACTGTCATGTAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CAA 90 bp | CTGTTGCCGTGGCCGTGGCTGCTGCTGCAGCTGTGGCTGTTCCCGTaGCTGTGGCTGCTCCTGCAGCTGTGGCTTCTCCTGCAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPWPWLLLQLWLFP*LWLLLQLWLLLQLW Trigger: CCACAGCTGCAGGAGAAGCCACAGCTGCAGGAGCAGCCACAGCAACGGGAACAGCCACAGCTGCAGCAGCAGCCACGGCCACGGCAACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS GCA 72 bp | GACAAAATCATCAGTGGCCATACTCATCACCACGTCTaGCCGGTCAGAGGGCTCTCCGTGTCCAACCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DKIISGHTHHHV*PVRGLSVSNLP Trigger: GGGAAGGTTGGACACGGAGAGCCCTCTGACCGGGCAGACGTGGTGATGAGTATGGCCACTGATGATTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CAA 90 bp | ACGTCTGCCCGGTCAGAGGGCTCTCCGTGTCCAACCTTCCCGCCTTaGCTCTTTAGATCAAGAAACCACGTACCACCATCTTCACCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSARSEGSPCPTFPP*LFRSRNHVPPSSPE Trigger: CTCAGGTGAAGATGGTGGTACGTGGTTTCTTGATCTAAAGAGCAAAGGCGGGAAGGTTGGACACGGAGAGCCCTCTGACCGGGCAGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CAA 72 bp | CGGTCAGAGGGCTCTCCGTGTCCAACCTTCCCGCCTTaGCTCTTTAGATCAAGAAACCACGTACCACCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RSEGSPCPTFPP*LFRSRNHVPPS Trigger: AGATGGTGGTACGTGGTTTCTTGATCTAAAGAGCAAAGGCGGGAAGGTTGGACACGGAGAGCCCTCTGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS GCA 72 bp | GGTCAGAGGGCTCTCCGTGTCCAACCTTCCCGCCTTTaGTCTTTAGATCAAGAAACCACGTACCACCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQRALRVQPSRL*SLDQETTYHHL Trigger: AAGATGGTGGTACGTGGTTTCTTGATCTAAAGAGCAAAGGCGGGAAGGTTGGACACGGAGAGCCCTCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CAA 72 bp | AGCCGTGTAGATTGTGCCGAGGAGTTTCGGGTGCTTTaGGGTGGTCTTCGCAGCAATGACAATATTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRVDCAEEFRVL*GGLRSNDNIGS Trigger: GGAGCCAATATTGTCATTGCTGCGAAGACCACCCAAAAGCACCCGAAACTCCTCGGCACAATCTACACGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 90 bp | TTCTTCAGCAGCCGTGTAGATTGTGCCGAGGAGTTTCGGGTGCTTTaGGGTGGTCTTCGCAGCAATGACAATATTGGCTCCATCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FFSSRVDCAEEFRVL*GGLRSNDNIGSILC Trigger: GCAAAGGATGGAGCCAATATTGTCATTGCTGCGAAGACCACCCAAAAGCACCCGAAACTCCTCGGCACAATCTACACGGCTGCTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS TCA 72 bp | GGAGTTTCGGGTGCTTTTGGGTGGTCTTCGCAGCAATaGCAATATTGGCTCCATCCTTTGCGGCTTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVSGAFGWSSQQ*QYWLHPLRLSR Trigger: CCTTGAAAGCCGCAAAGGATGGAGCCAATATTGTCATTGCTGCGAAGACCACCCAAAAGCACCCGAAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 72 bp | CTTCCACAGCTCCAAAATGTGGTTTTTGTGGTAGCATaGACTGCACAAATGGCTGTGGCTGTTGCCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPQLQNVVFVVA*TAQMAVAVAVA Trigger: GGCCACGGCAACAGCCACAGCCATTTGTGCAGTCAATGCTACCACAAAAACCACATTTTGGAGCTGTGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||
| CDS CAA 72 bp | GGGTGCTTTTGGGTGGTCTTCGCAGCAATGACAATATaGGCTCCATCCTTTGCGGCTTTCAAGGCAATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCFWVVFAAMTI*APSFAAFKAIA Trigger: AGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATATTGTCATTGCTGCGAAGACCACCCAAAAGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 90 bp | AGGAGTTTCGGGTGCTTTTGGGTGGTCTTCGCAGCAATGACAATATaGGCTCCATCCTTTGCGGCTTTCAAGGCAATTGCTTTGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RSFGCFWVVFAAMTI*APSFAAFKAIALPM Trigger: CATTGGCAAAGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATATTGTCATTGCTGCGAAGACCACCCAAAAGCACCCGAAACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 72 bp | TTGGCTCCATCCTTTGCGGCTTTCAAGGCAATTGCTTaGCCAATGCCTCGGCTTGCACCTGTGATAAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: LAPSFAAFKAIA*PMPRLAPVIKT Trigger: AGTTTTTATCACAGGTGCAAGCCGAGGCATTGGCAAAGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 72 bp | CCCCTGGTGTTCACATTCATCATCAAGTCCACTCTCTaGGTCGGAGTGTCCAACGTGTTGGTCAAGCTAATA | + |
|
Preference number: 6 (lower is better) Translates to: PLVFTFIIKSTL*VGVSNVLVKLI Trigger: TATTAGCTTGACCAACACGTTGGACACTCCGACCAAGAGAGTGGACTTGATGATGAATGTGAACACCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000128792.2 |
||
| CDS CAA 90 bp | ATGACAATATTGGCTCCATCCTTTGCGGCTTTCAAGGCAATTGCTTaGCCAATGCCTCGGCTTGCACCTGTGATAAAAACTGTGCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: MTILAPSFAAFKAIA*PMPRLAPVIKTVHP Trigger: GGGATGCACAGTTTTTATCACAGGTGCAAGCCGAGGCATTGGCAAAGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATATTGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS GCA 72 bp | AATATTGGCTCCATCCTTTGCGGCTTTCAAGGCAATTaGTTTGCCAATGCCTCGGCTTGCACCTGTGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: NIGSILCGFQGN*FANASACTCDK Trigger: TTTATCACAGGTGCAAGCCGAGGCATTGGCAAAGCAATTGCCTTGAAAGCCGCAAAGGATGGAGCCAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 72 bp | ATCAAGTCCACTCTCTTGGTCGGAGTGTCCAACGTGTaGGTCAAGCTAATAGCACTGGCATTGTTCACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IKSTLLVGVSNV*VKLIALALFTK Trigger: TTTGGTGAACAATGCCAGTGCTATTAGCTTGACCAACACGTTGGACACTCCGACCAAGAGAGTGGACTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000128792.2 |
||
| CDS CAA 90 bp | TTGGTCGGAGTGTCCAACGTGTTGGTCAAGCTAATAGCACTGGCATaGTTCACCAAAATATCAATTCCTCCAAATTTCTCCACAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVGVSNVLVKLIALA*FTKISIPPNFSTAF Trigger: GAAAGCTGTGGAGAAATTTGGAGGAATTGATATTTTGGTGAACAATGCCAGTGCTATTAGCTTGACCAACACGTTGGACACTCCGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 90 bp | TTGGTCGGAGTGTCCAACGTGTTGGTCAAGCTAATAGCACTGGCATaGTTCACCAAAATATCAATTCCTGTTTCCAAAGGAAACACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVGVSNVLVKLIALA*FTKISIPVSKGNTS Trigger: GGAAGTGTTTCCTTTGGAAACAGGAATTGATATTTTGGTGAACAATGCCAGTGCTATTAGCTTGACCAACACGTTGGACACTCCGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128792.2 |
||
| CDS GCA 72 bp | AATTTCTCCACAGCTTTCTCCACTGCACTGTTGATTTaGTGTTCATCTCTCACATCAACAACACAAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NFSTAFSTALLI*CSSLTSTTQGK Trigger: CTTGCCTTGTGTTGTTGATGTGAGAGATGAACAGCAAATCAACAGTGCAGTGGAGAAAGCTGTGGAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 90 bp | ACATTCATCATCAAGTCCACTCTCTTGGTCGGAGTGTCCAACGTGTaGGTCAAGCTAATAGCACTGGCATTGTTCACCAAAATATCAATT | + |
|
Preference number: 6 (lower is better) Translates to: TFIIKSTLLVGVSNV*VKLIALALFTKISI Trigger: AATTGATATTTTGGTGAACAATGCCAGTGCTATTAGCTTGACCAACACGTTGGACACTCCGACCAAGAGAGTGGACTTGATGATGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000128792.2 |
||
| CDS CAA 72 bp | GTGTCCAACGTGTTGGTCAAGCTAATAGCACTGGCATaGTTCACCAAAATATCAATTCCTCCAAATTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSNVLVKLIALA*FTKISIPPNFS Trigger: GGAGAAATTTGGAGGAATTGATATTTTGGTGAACAATGCCAGTGCTATTAGCTTGACCAACACGTTGGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030078.12 |
||
| CDS CAA 72 bp | AGTCTAGAATTCATCTGGGTCATTAGCTTCTCCAATTaGATTGCTAGGGCTATGTTTCCTTTAATCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLEFIWVISFSN*IARAMFPLIFN Trigger: GTTGAAGATTAAAGGAAACATAGCCCTAGCAATCAAATTGGAGAAGCTAATGACCCAGATGAATTCTAGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030078.12 ENSMUST00000107528.8 |
||