Pregenerated sensors for HSD3B7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042289Ensembl transcript IDs: ENSMUST00000046863.12, ENSMUST00000106271.2, ENSMUST00000106272.8, ENSMUST00000125188.8, ENSMUST00000138432.2, ENSMUST00000139068.8, ENSMUST00000155005.3, ENSMUST00000206674.2
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCCTaGCCCTGCCATCACCGAGCTGAACCCTCCATCGCCTGCACCCAC | + |
|
Preference number: 1 (lower is better) Translates to: GGSGPGVCATVVSSS*PCHHRAEPSIACTH Trigger: GTGGGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR TCA 90 bp | ATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCTaGACCCTCCATCGCCTGCACCCACTGAATGGTGCGGGTCCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: MCHSGLQFLALPSPS*TLHRLHPLNGAGPA Trigger: AGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 90 bp | CCTGCCATCACCGAGCTGAACCCTCCATCGCCTGCACCCACTGAATaGTGCGGGTCCTGCTCTCTTCCCATGAGAAGAGGGGCTTGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: PAITELNPPSPAPTE*CGSCSLPMRRGACS Trigger: GCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR GCA 90 bp | GCCATCACCGAGCTGAACCCTCCATCGCCTGCACCCACTGAATGGTaGGGGTCCTGCTCTCTTCCCATGAGAAGAGGGGCTTGTAGCCAA | + |
|
Preference number: 1 (lower is better) Translates to: AITELNPPSPAPTEW*GSCSLPMRRGACSQ Trigger: TTGGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR GCA 90 bp | GAGCTGAACCCTCCATCGCCTGCACCCACTGAATGGTGCGGGTCCTaGTCTCTTCCCATGAGAAGAGGGGCTTGTAGCCAAAATGCCGCT | + |
|
Preference number: 1 (lower is better) Translates to: ELNPPSPAPTEWCGS*SLPMRRGACSQNAA Trigger: AGCGGCATTTTGGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 90 bp | CTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTaGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCTGAACCCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: LHPDLGAQDLEYVPQ*SPVPGPAITELNPP Trigger: TGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR TCA 90 bp | CATCGCCTGCACCCACTGAATGGTGCGGGTCCTGCTCTCTTCCCATaGGAAGAGGGGCTTGTAGCCAAAATGCCGCTGTGCCTTGTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: HRLHPLNGAGPALFP*EEGLVAKMPLCLVG Trigger: ACCAACAAGGCACAGCGGCATTTTGGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR TCA 90 bp | TTGGACTGGCCTTCCCAAACACATCCACCAACCCAGCTGTATGGATaGCCACATGTGATCCAGACATGGCTGCTGCCACCTCATGGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: LDWPSQTHPPTQLYG*PHVIQTWLLPPHGP Trigger: AGGCCCATGAGGTGGCAGCAGCCATGTCTGGATCACATGTGGTCATCCATACAGCTGGGTTGGTGGATGTGTTTGGGAAGGCCAGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR GCA 90 bp | TCCTTCCATTGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTaGATGGGTAGGGATGGCTGTGGACTGCCTCATATGGGGTATCTT | + |
|
Preference number: 1 (lower is better) Translates to: SFHWPRGPAAQQGLY*MGRDGCGLPHMGYL Trigger: AAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR TCA 90 bp | CTTCCCAAACACATCCACCAACCCAGCTGTATGGATGACCACATGTaGTCCAGACATGGCTGCTGCCACCTCATGGGCCTGAGTCACATC | + |
|
Preference number: 1 (lower is better) Translates to: LPKHIHQPSCMDDHM*SRHGCCHLMGLSHI Trigger: GATGTGACTCAGGCCCATGAGGTGGCAGCAGCCATGTCTGGATCACATGTGGTCATCCATACAGCTGGGTTGGTGGATGTGTTTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CCA 90 bp | AAAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTaGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCA | + |
|
Preference number: 1 (lower is better) Translates to: KRQPFLFIQIWGLRT*SMCHSGLQFLALPS Trigger: TGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 90 bp | GTCTTTGGACTGGCCTTCCCAAACACATCCACCAACCCAGCTGTATaGATGACCACATGTGATCCAGACATGGCTGCTGCCACCTCATGG | + |
|
Preference number: 1 (lower is better) Translates to: VFGLAFPNTSTNPAV*MTTCDPDMAAATSW Trigger: CCATGAGGTGGCAGCAGCCATGTCTGGATCACATGTGGTCATCCATACAGCTGGGTTGGTGGATGTGTTTGGGAAGGCCAGTCCAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CCA 90 bp | TCCATTGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTGCATaGGTAGGGATGGCTGTGGACTGCCTCATATGGGGTATCTTCATT | + |
|
Preference number: 1 (lower is better) Translates to: SIGLEDQLLSKGFTA*VGMAVDCLIWGIFI Trigger: AATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CCA 90 bp | AAGGGCTTTACTGCATGGGTAGGGATGGCTGTGGACTGCCTCATATaGGGTATCTTCATTGCCCCTGTAGAAGGGGTGGCCCTTGATGTT | + |
|
Preference number: 1 (lower is better) Translates to: KGFTAWVGMAVDCLI*GIFIAPVEGVALDV Trigger: AACATCAAGGGCCACCCCTTCTACAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR TCA 90 bp | CAGTCTGCACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTTaGCTTTGTGGATGGTCTTTGGACTGGCCTTCCCAAACACATCCA | + |
|
Preference number: 1 (lower is better) Translates to: QSAHKHQSHSVCPAR*LCGWSLDWPSQTHP Trigger: TGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGTGCAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CCA 90 bp | AGAGTCTTCATCTTCAAAAGGCAGCCATTTCTCTTCATCCAGATTTaGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: RVFIFKRQPFLFIQI*GLRTWSMCHSGLQF Trigger: GAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTTTGAAGATGAAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR CCA 90 bp | ACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTTGACTTTGTaGATGGTCTTTGGACTGGCCTTCCCAAACACATCCACCAACCCA | + |
|
Preference number: 1 (lower is better) Translates to: TQASITFCVPCTLTL*MVFGLAFPNTSTNP Trigger: TGGGTTGGTGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCTGGCCCTGCCATCACCGAGCTGAACCCTCCATCGCCTGCACCCACTGAAGGGCGGAGCAGCCACTaGAGCAGGGCATTGAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VPGPAITELNPPSPAPTEGRSSH*SRALRV Trigger: TACCCTCAATGCCCTGCTGCAGTGGCTGCTCCGCCC...TTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CAA 90 bp | AGGGCACATGTCACCAGGGGTAGCCCTCCATTGACCTTCCTTCCATaGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTGCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: RAHVTRGSPPLTFLP*ASRTSCSARALLHG Trigger: CCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCTGGTGACATGTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGATGGCTGTGGACTGCCTCATATGGGGTATCTTCATTGCCCCTGTAGAAGGGGCCACCTCATGGGCCTaGGTCACATCCCCCTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: GMAVDCLIWGIFIAPVEGATSWA*VTSPWM Trigger: CATCCAGGGGGATGTGACTCAGGCCCATGAGGTGGC...CCCTTCTACAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR GCA 90 bp | GGATGGTCTTTGGACTGGCCTTCCCAAACACATCCACCAACCCAGCTGTATGGATGGATGGCAGTCACCTaGACAGGCCCTGGTGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GWSLDWPSQTHPPTQLYGWMAVT*TGPGGD Trigger: GTCTCCACCAGGGCCTGTGCAGGTGACTGCCATCCA...TCCATACAGCTGGGTTGGTGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAATGTGTACAGCACCAGTaGGCGGAGCAGCCACTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GRPELAPKIGLSPNPILECVQHQ*AEQPLQ Trigger: CTGCAGTGGCTGCTCCGCCCACTGGTGCTGTACACA...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTGCTCAGCAAGGGCTTTACTGCATGGGTAGGGATGGCTGTGGACTGCCTCTGCACGTTGACTTTGTaGATGGTCTTTGGACTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QLLSKGFTAWVGMAVDCLCTLTL*MVFGLA Trigger: GGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCA...GAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTGAGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCACCTCAAGAAATCAGTTTTaGCAACTACCTGGCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QDLEYVPQWSPVPGPAITSRNQF*QLPGRP Trigger: AGGCCTGCCAGGTAGTTGGCAAAACTGATTTCTTGA...GGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGTGGTCTCCAGTTCCTaGCCCTGCCATCACCGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLVVSSS*PCHHRA Trigger: AGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCAC...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGGGATGGCTGTGGACTGCCTCATATGGGGTATCTTCATTGCCCCTGTAGAACATGTGATCCAGACATaGCTGCTGCCACCTCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: VGMAVDCLIWGIFIAPVEHVIQT*LLPPHG Trigger: CCCATGAGGTGGCAGCAGCCATGTCTGGATCACATG...TTCTACAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAGTATGTGCCACAGTaGTCTCCAGTTCCTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLEYVPQ*SPVPGP Trigger: AGGGCCAGGAACTGGAGACCACTGTGGCACATACTC...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR CAA 90 bp | CCAGTCTGCACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTaGACTTTGTGGATGGTCTTTGGACTGGCCTTCCCAAACACATCC | + |
|
Preference number: 2 (lower is better) Translates to: PVCTQASITFCVPCT*TLWMVFGLAFPNTS Trigger: GGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGTGCAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAGGACCTGGAGTATGTaGCACAGTGGTCTCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LAPKIGLSPNPILELGDWRTWSM*HSGLQF Trigger: GAACTGGAGACCACTGTGGCACATACTCCAGGTCCT...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCATCAATCACATTCTGTGTGCCCTGCACGTTGACTTTGTGGATGGTCTTTTCCAGACATGGCTGCTaGCACCTCATGGGCCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: QASITFCVPCTLTLWMVFSRHGC*HLMGLS Trigger: ACTCAGGCCCATGAGGTGGCAGCAGCCATGTCTGGA...AAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGCTCTTCATCCAGATTTaGGGGCTCAGGACCTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LAPKIGLSPNPILELGDWLFIQI*GLRTWS Trigger: ACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAG...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCTCGTGTAGACCAGGTACTGAGTGCCAGTCTGCACACAAGCATCAATCAGGATGGTCTTTGGACTaGCCTTCCCAAACACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: CCSCRPGTECQSAHKHQSGWSLD*PSQTHP Trigger: TGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCC...TGATTGATGCTTGTGTGCAGACTGGCACTCAGTACCTGGTCTACACGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CAA 90 bp | CAGAGTCTTCATCTTCAAAAGGCAGCCATTTCTCTTCATCCAGATTaGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QSLHLQKAAISLHPD*GAQDLEYVPQWSPV Trigger: AACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTTTGAAGATGAAGACTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR CAA 90 bp | TGCACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTTGACTTaGTGGATGGTCTTTGGACTGGCCTTCCCAAACACATCCACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: CTQASITFCVPCTLT*WMVFGLAFPNTSTN Trigger: GTTGGTGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACACCTGCTCTCTTCCCATaGGAAGAGGGGCTTGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LGEEANNVIGEFVRRGKTPALFP*EEGLVA Trigger: GGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGG...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCACATCACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCCTCTTCATCCAGATTTaGGGGCTCAGGACCTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GPHHGVMMCRAESSSSKGLFIQI*GLRTWS Trigger: ACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAG...GCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTGATGTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTCTCTTCATCCAGATTTaGGGGCTCAGGACCTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LCSSLLEKLETGRGSETILFIQI*GLRTWS Trigger: ACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAG...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGCTGTTCCTCCCTGCTTaGGAAACTGGAAACAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KISGVSVPPCLRNWKQEELFLPA*ETGNRK Trigger: CTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAG...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGAAATCGCACCCACTGAATGGTaGGGGTCCTGCTCTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: EANNVIGEFVRRGKTWEIAPTEW*GSCSLP Trigger: GGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGC...GATTTCCCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACCTAGAACTAGGAGACTaGAATATGAACCAGTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QPFLFIQIWGLRTWSMCHLELGD*NMNQSQ Trigger: CTGAGACTGGTTCATATTCCAGTCTCCTAGTTCTAG...GTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTCTGCACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTTGACTTTGACCAACCCAGCTGTATaGATGACCACATGTGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: PVCTQASITFCVPCTLTLTNPAV*MTTCDP Trigger: TGGATCACATGTGGTCATCCATACAGCTGGGTTGGT...CAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGTGCAGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CAA 90 bp | GACCATTCAAGAAATCAGTTTTGCCAACTACCTGGCAGGCCTGAGTaGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: DHSRNQFCQLPGRPE*APKIGLSPNPILEL Trigger: TAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCCAGGTAGTTGGCAAAACTGATTTCTTGAATGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTTCAAGAAATCAGTTTTaGCAACTACCTGGCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KGSHFSSSRFGGSGPGVCSRNQF*QLPGRP Trigger: AGGCCTGCCAGGTAGTTGGCAAAACTGATTTCTTGA...ACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGAAATCGAGTATGTGCCACAGTaGTCTCCAGTTCCTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: EANNVIGEFVRRGKTWEIEYVPQ*SPVPGP Trigger: AGGGCCAGGAACTGGAGACCACTGTGGCACATACTC...GATTTCCCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGTGTAGTTAAGATGTGGCAGGGTCCACATCACGGAGTCATGATGTGTAGATCAAGAAATCAGTTTTaGCAACTACCTGGCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ICVVKMWQGPHHGVMMCRSRNQF*QLPGRP Trigger: AGGCCTGCCAGGTAGTTGGCAAAACTGATTTCTTGA...TCTACACATCATGACTCCGTGATGTGGACCCTGCCACATCTTAACTACACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATCTAGAACTAGGAGACTaGAATATGAACCAGTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: APKIGLSPNPILELGDWNLELGD*NMNQSQ Trigger: CTGAGACTGGTTCATATTCCAGTCTCCTAGTTCTAG...ATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGCTAGAACTAGGAGACTaGAATATGAACCAGTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KISGVSVPPCLRNWKQEELELGD*NMNQSQ Trigger: CTGAGACTGGTTCATATTCCAGTCTCCTAGTTCTAG...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACACCCTGCTTGAGAAACTaGAAACAGGAAGAGGTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGEEANNVIGEFVRRGKTPCLRN*KQEEVV Trigger: CACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGG...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGAATCTGAAAATGGTAGCTaGAGTAAGCAGACCAGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: EEANNVIGEFVRRGKTWESENGS*SKQTSV Trigger: TACGCTGGTCTGCTTACTTCAGCTACCATTTTCAGA...TTCCCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGAAATCTCTGAAAATGGTAGCTaGAGTAAGCAGACCAGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: EANNVIGEFVRRGKTWEISENGS*SKQTSV Trigger: TACGCTGGTCTGCTTACTTCAGCTACCATTTTCAGA...GATTTCCCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR GCA 72 bp | AGGGGTGTGTACAGCACCAGTGGGCGGAGCAGCCACTaGAGCAGGGCATTGAGGGTAGCCAGCAGCACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RGVYSTSGRSSH*SRALRVASSTS Trigger: GCTAGTGCTGCTGGCTACCCTCAATGCCCTGCTGCAGTGGCTGCTCCGCCCACTGGTGCTGTACACACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR TCA 72 bp | AGTGGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCTaGACCCTCCATCGCCTGCACCCACTGAATGGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: SGLQFLALPSPS*TLHRLHPLNGA Trigger: CGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR GCA 72 bp | GGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTaGCATCACCGAGCTGAACCCTCCATCGCCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GVCATVVSSSWP*HHRAEPSIACT Trigger: GGTGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 72 bp | GGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCCTaGCCCTGCCATCACCGAGCTGAACCCTCCATCGCC | + |
|
Preference number: 3 (lower is better) Translates to: GPGVCATVVSSS*PCHHRAEPSIA Trigger: GGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR GCA 72 bp | GAGCTGAACCCTCCATCGCCTGCACCCACTGAATGGTaGGGGTCCTGCTCTCTTCCCATGAGAAGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELNPPSPAPTEW*GSCSLPMRRGA Trigger: AGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 72 bp | ACCGAGCTGAACCCTCCATCGCCTGCACCCACTGAATaGTGCGGGTCCTGCTCTCTTCCCATGAGAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TELNPPSPAPTE*CGSCSLPMRRG Trigger: CCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGGGTTCAGCTCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 72 bp | GATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTaGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DLGAQDLEYVPQ*SPVPGPAITEL Trigger: CAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR GCA 72 bp | CCTCCATCGCCTGCACCCACTGAATGGTGCGGGTCCTaGTCTCTTCCCATGAGAAGAGGGGCTTGTAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PPSPAPTEWCGS*SLPMRRGACSQ Trigger: TTGGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGATGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR TCA 72 bp | CACCCACTGAATGGTGCGGGTCCTGCTCTCTTCCCATaGGAAGAGGGGCTTGTAGCCAAAATGCCGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HPLNGAGPALFP*EEGLVAKMPLC Trigger: GCACAGCGGCATTTTGGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR GCA 72 bp | TGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTaGATGGGTAGGGATGGCTGTGGACTGCCTCATATG | + |
|
Preference number: 3 (lower is better) Translates to: WPRGPAAQQGLY*MGRDGCGLPHM Trigger: CATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CCA 72 bp | CTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTGCATaGGTAGGGATGGCTGTGGACTGCCTCATATGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LEDQLLSKGFTA*VGMAVDCLIWG Trigger: ACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR TCA 72 bp | CACATCCACCAACCCAGCTGTATGGATGACCACATGTaGTCCAGACATGGCTGCTGCCACCTCATGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HIHQPSCMDDHM*SRHGCCHLMGL Trigger: CAGGCCCATGAGGTGGCAGCAGCCATGTCTGGATCACATGTGGTCATCCATACAGCTGGGTTGGTGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR GCA 72 bp | TTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTaGCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: FIQIWGLRTWSM*HSGLQFLALPS Trigger: TGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CCA 72 bp | ACTGCATGGGTAGGGATGGCTGTGGACTGCCTCATATaGGGTATCTTCATTGCCCCTGTAGAAGGGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAWVGMAVDCLI*GIFIAPVEGVA Trigger: GGCCACCCCTTCTACAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCCCACCACTTCCATGCTGCTCGTGTAGACCAGGTACTGAGTGCCAGTCTGCTTTGTGGATGGTCTTaGGACTGGCCTTCCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RPHHFHAARVDQVLSASLLCGWS*DWPSQT Trigger: TGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAG...CAGACTGGCACTCAGTACCTGGTCTACACGAGCAGCATGGAAGTGGTGGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CCA 72 bp | CCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTaGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFLFIQIWGLRT*SMCHSGLQFLA Trigger: GGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR TCA 72 bp | CCTTCCCAAACACATCCACCAACCCAGCTGTATGGATaGCCACATGTGATCCAGACATGGCTGCTGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: PSQTHPPTQLYG*PHVIQTWLLPP Trigger: AGGTGGCAGCAGCCATGTCTGGATCACATGTGGTCATCCATACAGCTGGGTTGGTGGATGTGTTTGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTCGTGTAGACCAGGTACTGAGTGCCAGTCTGCACACAAGCATCAATCACCCTGCACGTTGACTTaGTGGATGGTCTTTGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: CCSCRPGTECQSAHKHQSPCTLT*WMVFGL Trigger: CAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGG...TGATTGATGCTTGTGTGCAGACTGGCACTCAGTACCTGGTCTACACGAGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGGATGGCTGTGGACTGCCTCATATGGGGTATCTTCATTGCCCCTGTAGAATGTGTGCCCTGCACGTaGACTTTGTGGATGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VGMAVDCLIWGIFIAPVECVPCT*TLWMVF Trigger: AAAGACCATCCACAAAGTCAACGTGCAGGGCACACA...TTCTACAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR GCA 72 bp | CCACTTCCATGCTGCTCGTGTAGACCAGGTACTGAGTaGCAGTCTGCACACAAGCATCAATCACATTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLPCCSCRPGTE*QSAHKHQSHSV Trigger: CACAGAATGTGATTGATGCTTGTGTGCAGACTGGCACTCAGTACCTGGTCTACACGAGCAGCATGGAAGTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR GCA 72 bp | AAGGGCTTTACTGCATGGGTAGGGATGGCTGTGGACTaGCTCATATGGGGTATCTTCATTGCCCCTGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGFTAWVGMAVD*LIWGIFIAPVE Trigger: TTCTACAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGTGCCGCTGTGCCTTGTaGGTACTGACAGTAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KISGVSVPPCLRNWKQEECRCAL*VLTVKV Trigger: CACCTTTACTGTCAGTACCAACAAGGCACAGCGGCA...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR TCA 72 bp | TTCAAGAAATCAGTTTTGCCAACTACCTGGCAGGCCTaGGTTGGCACCAAAGATAGGCCTTTCCCCAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: FKKSVLPTTWQA*VGTKDRPFPKP Trigger: GGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCCAGGTAGTTGGCAAAACTGATTTCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR TCA 72 bp | CACAAGCATCAATCACATTCTGTGTGCCCTGCACGTTaGCTTTGTGGATGGTCTTTGGACTGGCCTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HKHQSHSVCPAR*LCGWSLDWPSQ Trigger: TTGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR GCA 72 bp | GACCAGCGTAAGATCTCTGGAGTCTCTGTTCCTCCCTaGTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DQRKISGVSVPP*LRNWKQEEVVR Trigger: TCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTTACGCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATCTCTTCATCCAGATTaGGGGGCTCAGGACCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGEEANNVIGEFVRRGKTSLHPD*GAQDLE Trigger: CTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGA...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGTTCAAGAAATCAGTTTaGCCAACTACCTGGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LAPKIGLSPNPILELGDWFKKSV*PTTWQA Trigger: GGCCTGCCAGGTAGTTGGCAAAACTGATTTCTTGAA...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGATCTGTTCCTCCCTGCTaGAGAAACTGGAAACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GVSVPPCLRNWKQEEVVRSVPPC*RNWKQE Trigger: TTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGA...TCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR CCA 72 bp | ATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTaGAAACAGGAAGAGGTAGTGAGACCATTCAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISGVSVPPCLRN*KQEEVVRPFKK Trigger: TTTCTTGAATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCACCTGCACAGGCCCTaGTTTCAGCTCCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLEYVPQWSPVPGPAITEHLHRP*FQLLQP Trigger: TGGCTGGAGGAGCTGAAAGCAGGGCCTGTGCAGGTG...CTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCTGAACCCTCCATCGCCTGCAGCCCCACCACTTCCATaGTGCTCGTGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSPVPGPAITELNPPSPAAPPLP*CSCRPG Trigger: ACCTGGTCTACACGAGCAGCATGGAAGTGGTGGGGC...TGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTGCCACCCATGAGTGCTaGCCGCTGCTCCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRFGGSGPGVCATVVSSATHEC*PLLQLP Trigger: CGGGAGCTGGAGCAGCGGGCAGCACTCATGGGTGGC...ACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCTGGCCACCCATGAGTaGTGCCCGCTGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPDLGAQDLEYVPQWSPVLATHE*CPLLQL Trigger: GAGCTGGAGCAGCGGGCAGCACTCATGGGTGGCCAG...AACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACCAGCGTAAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGACACCTGGCCACCCATaGGTGCTGCCCGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ADQRKISGVSVPPCLRNWTPGHP*VLPAAP Trigger: TGGAGCAGCGGGCAGCACTCATGGGTGGCCAGGTGT...CCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTTACGCTGGTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCCAGTTCCTGGCCCTGCCATCACCGAGCTGAACCCTCCATCGCCTGCACAGCAAGGGCTTTACTaGATGGGTAGGGATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSPVPGPAITELNPPSPAQQGLY*MGRDGC Trigger: ACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTG...TGCAGGCGATGGAGGGTTCAGCTCGGTGATGGCAGGGCCAGGAACTGGAGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGATGAGTGCTGCCCGCTaGTCCAGCTCCCGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLMSAAR*SSSRAT Trigger: GGTGGCCCGGGAGCTGGAGCAGCGGGCAGCACTCAT...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAAGGGCGGAGCAGCCACTaGAGCAGGGCATTGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRPELAPKIGLSPNPILEGRSSH*SRALRV Trigger: TACCCTCAATGCCCTGCTGCAGTGGCTGCTCCGCCC...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| 3UTR CAA 72 bp | GTCACCAGGGGTAGCCCTCCATTGACCTTCCTTCCATaGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VTRGSPPLTFLP*ASRTSCSARAL Trigger: TAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCTGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| CDS-3UTR TCA 90 bp | CATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTAGCCGCAGCCACCTGTaGCCAGGTATACCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPDLGAQDLEYVPQWSPVSRSHL*PGIPVL Trigger: CAACACTGGTATACCTGGTCACAGGTGGCTGCGGCT...AACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACACCTGCACAGGCCCTaGTTTCAGCTCCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPELAPKIGLSPNPILEHLHRP*FQLLQP Trigger: TGGCTGGAGGAGCTGAAAGCAGGGCCTGTGCAGGTG...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCACCGAGAGACCAGGTACTGAGTaGCAGTCTGCACACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLEYVPQWSPVPGPAITERPGTE*QSAHKH Trigger: ATGCTTGTGTGCAGACTGGCACTCAGTACCTGGTCT...CTCGGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR GCA 90 bp | GCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAGTGCTGCCCGCTaGTCCAGCTCCCGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: APKIGLSPNPILELGDWNMSAAR*SSSRAT Trigger: GGTGGCCCGGGAGCTGGAGCAGCGGGCAGCACTCAT...ATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGCCACCCATGAGTGCTaGCCGCTGCTCCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEEATHEC*PLLQLP Trigger: CGGGAGCTGGAGCAGCGGGCAGCACTCATGGGTGGC...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGCTGGCCACCCATGAGTaGTGCCCGCTGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLLATHE*CPLLQL Trigger: GAGCTGGAGCAGCGGGCAGCACTCATGGGTGGCCAG...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACGCACCCACTGAATGGTaGGGGTCCTGCTCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPFLFIQIWGLRTWSMCHAPTEW*GSCSLP Trigger: GGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGC...GTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGCCGCAGCCACCTGTaGCCAGGTATACCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPFLFIQIWGLRTWSMCHSRSHL*PGIPVL Trigger: CAACACTGGTATACCTGGTCACAGGTGGCTGCGGCT...GTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGACACCTGGCCACCCATaGGTGCTGCCCGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEETPGHP*VLPAAP Trigger: TGGAGCAGCGGGCAGCACTCATGGGTGGCCAGGTGT...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGATCGCCTGCACCCACTaGATGGTGCGGGTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAPKIGLSPNPILELGDWIACTH*MVRVLL Trigger: GAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGAT...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCGCCTCGAGGACCAGCTaGTCAGCAAGGGCTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSSRFGGSGPGVCATVVASRTS*SARALL Trigger: CAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGC...GACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCAATGAGTGCTGCCCGCTaGTCCAGCTCCCGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DRPFPKPYPRTRRLEYEPMSAAR*SSSRAT Trigger: GGTGGCCCGGGAGCTGGAGCAGCGGGCAGCACTCAT...TGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCAGCCATTTCGCCACCCATGAGTGCTaGCCGCTGCTCCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HGVMMCRAESSSSKGSHFATHEC*PLLQLP Trigger: CGGGAGCTGGAGCAGCGGGCAGCACTCATGGGTGGC...GAAATGGCTGCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTGCACCCACTGAATGGTaGGGGTCCTGCTCTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFIQIWGLRTWSMCHSGAPTEW*GSCSLP Trigger: GGGAAGAGAGCAGGACCCGCACCATTCAGTGGGTGC...ACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGTGCCAGTCTGCACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTGGCCTGTCCACACCCTaGTTTCAGCTCCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TECQSAHKHQSHSVCPARGLSTP*FQLLQP Trigger: TGGCTGGAGGAGCTGAAAGCAGGGTGTGGACAGGCC...ACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGTGCAGACTGGCACTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| CDS-3UTR TCA 90 bp | GATGGTCTTTGGACTGGCCTTCCCAAACACATCCACCAACCCAGCTGTATGGATAGCCGCAGCCACCTGTaGCCAGGTATACCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLWTGLPKHIHQPSCMDSRSHL*PGIPVL Trigger: CAACACTGGTATACCTGGTCACAGGTGGCTGCGGCT...ATCCATACAGCTGGGTTGGTGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| CDS-3UTR TCA 90 bp | GGTCCACATCACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCGCCACCTCATGGGCCTaGGTCACATCCCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GPHHGVMMCRAESSSSKGATSWA*VTSPWM Trigger: CATCCAGGGGGATGTGACTCAGGCCCATGAGGTGGC...GCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTGATGTGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTGTAGTTAAGATGTGGCAGGGTCCACATCACGGAGTCATGATGTGTAGAACACCTGGCCACCCATaGGTGCTGCCCGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICVVKMWQGPHHGVMMCRTPGHP*VLPAAP Trigger: TGGAGCAGCGGGCAGCACTCATGGGTGGCCAGGTGT...TCTACACATCATGACTCCGTGATGTGGACCCTGCCACATCTTAACTACACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGCACCTGCACAGGCCCTaGTTTCAGCTCCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLHLHRP*FQLLQP Trigger: TGGCTGGAGGAGCTGAAAGCAGGGCCTGTGCAGGTG...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | TCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTCCACCACTTCCATGCTaGTCGTGTAGACCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SSRFGGSGPGVCATVVSSPPLPC*SCRPGT Trigger: AGTACCTGGTCTACACGAGCAGCATGGAAGTGGTGG...ACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGTGTAGTTAAGATGTGGCAGGGTCCACATCACGGAGTCATGATGTGTAGACTGGCCACCCATGAGTaGTGCCCGCTGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICVVKMWQGPHHGVMMCRLATHE*CPLLQL Trigger: GAGCTGGAGCAGCGGGCAGCACTCATGGGTGGCCAG...TCTACACATCATGACTCCGTGATGTGGACCCTGCCACATCTTAACTACACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTAAGGGCTTTACTGCATaGGTAGGGATGGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRFGGSGPGVCATVVSSKGFTA*VGMAVD Trigger: GTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT...ACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGTGTGTACAGCACCAGTaGGCGGAGCAGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLCVQHQ*AEQPLQ Trigger: CTGCAGTGGCTGCTCCGCCCACTGGTGCTGTACACA...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATCCTGCTCTCTTCCCATaGGAAGAGGGGCTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKAAISLHPDLGAQDLEYPALFP*EEGLVA Trigger: GGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGG...ATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGATCGCCTGCACCCACTaGATGGTGCGGGTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEEANNVIGEFVRRGKTWIACTH*MVRVLL Trigger: GAGCAGGACCCGCACCATTCAGTGGGTGCAGGCGAT...CCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACCACCACTTCCATGCTaGTCGTGTAGACCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GRPELAPKIGLSPNPILEPPLPC*SCRPGT Trigger: AGTACCTGGTCTACACGAGCAGCATGGAAGTGGTGG...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGCCCCACCACTTCCATaGTGCTCGTGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKAAISLHPDLGAQDLEYAPPLP*CSCRPG Trigger: ACCTGGTCTACACGAGCAGCATGGAAGTGGTGGGGC...ATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGAGCCCCACCACTTCCATaGTGCTCGTGTAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVSVPPCLRNWKQEEVVRAPPLP*CSCRPG Trigger: ACCTGGTCTACACGAGCAGCATGGAAGTGGTGGGGC...TCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GCAGACCAGCGTAAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGCAGCAAGGGCTTTACTaGATGGGTAGGGATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADQRKISGVSVPPCLRNWQQGLY*MGRDGC Trigger: ACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTG...CCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTTACGCTGGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACCGGGCCACCAGTATGTaGATCCAAGCAACATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPFLFIQIWGLRTWSMCHRATSM*IQATLP Trigger: TGGCAATGTTGCTTGGATGCACATACTGGTGGCCCG...GTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACCGGGCCACCAGTATGTaGATCCAAGCAACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFLFIQIWGLRTWSMCHRATSM*IQATLP Trigger: AGGCAATGTTGCTTGGATGCACATACTGGTGGCCCG...GTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAAGGGCTTTACTGCATaGGTAGGGATGGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPFLFIQIWGLRTWSMCHKGFTA*VGMAVD Trigger: GTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT...GTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTCCTGGCCCTGCCATCACCTCAGAAACTCCATGTTaGAGTCCTCGTAGCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLEYVPQWSPVPGPAITSETPC*SPRSFY Trigger: ATAAAAGCTACGAGGACTTCAACATGGAGTTTCTGA...GGTGATGGCAGGGCCAGGAACTGGAGACCACTGTGGCACATACTCCAGGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR TCA 90 bp | GCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATCCTGCTCTCTTCCCATaGGAAGAGGGGCTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: APKIGLSPNPILELGDWNPALFP*EEGLVA Trigger: GGCTACAAGCCCCTCTTCTCATGGGAAGAGAGCAGG...ATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGCCTCGAGGACCAGCTaGTCAGCAAGGGCTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEEASRTS*SARALL Trigger: CAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGC...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTGCCTCGAGGACCAGCTaGTCAGCAAGGGCTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LCSSLLEKLETGRGSETIASRTS*SARALL Trigger: CAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGC...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGCATGTGATCCAGACATaGCTGCTGCCACCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLHVIQT*LLPPHG Trigger: CCCATGAGGTGGCAGCAGCCATGTCTGGATCACATG...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGCATGTGATCCAGACATaGCTGCTGCCACCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPKIGLSPNPILELGDWHVIQT*LLPPHG Trigger: CCCATGAGGTGGCAGCAGCCATGTCTGGATCACATG...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAATGCACGTTGACTTTGTaGATGGTCTTTGGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPELAPKIGLSPNPILECTLTL*MVFGLA Trigger: GGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCA...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGTGTAGTTAAGATGTGGCAGGGTCCACATCACGGAGTCATGATGTGTAGATGTGTACAGCACCAGTaGGCGGAGCAGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICVVKMWQGPHHGVMMCRCVQHQ*AEQPLQ Trigger: CTGCAGTGGCTGCTCCGCCCACTGGTGCTGTACACA...TCTACACATCATGACTCCGTGATGTGGACCCTGCCACATCTTAACTACACAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | GATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCAAGCCGCAGCCACCTGTaGCCAGGTATACCAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRPFPKPYPRTRRLEYEPSRSHL*PGIPVL Trigger: CAACACTGGTATACCTGGTCACAGGTGGCTGCGGCT...TGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGATGGATGACCACATGTaGTCCAGACATGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAPKIGLSPNPILELGDWMDDHM*SRHGCC Trigger: GCAGCAGCCATGTCTGGATCACATGTGGTCATCCAT...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCAGCCATTTCTCCAGACATGGCTGCTaGCACCTCATGGGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGVMMCRAESSSSKGSHFSRHGC*HLMGLS Trigger: ACTCAGGCCCATGAGGTGGCAGCAGCCATGTCTGGA...GAAATGGCTGCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGGGGCTTGTAGCCAAAATGCCGCTGTGCCTTGTTGGTACTGACAGTAAACCACCACTTCCATGCTaGTCGTGTAGACCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EEGLVAKMPLCLVGTDSKPPLPC*SCRPGT Trigger: AGTACCTGGTCTACACGAGCAGCATGGAAGTGGTGG...TTTACTGTCAGTACCAACAAGGCACAGCGGCATTTTGGCTACAAGCCCCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGATGGGGTATCTTCATTaGCCCTGTAGAAGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLMGYLH*PCRRGG Trigger: GCCACCCCTTCTACAGGGGCAATGAAGATACCCCAT...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGGGATGGCTGTGGACTaGCTCATATGGGGTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLGMAVD*LIWGIF Trigger: GAAGATACCCCATATGAGGCAGTCCACAGCCATCCC...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGCGGGCCACCAGTATGTaGATCCAAGCAACATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLRATSM*IQATLP Trigger: TGGCAATGTTGCTTGGATGCACATACTGGTGGCCCG...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAAACCAACCCAGCTGTATaGATGACCACATGTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPELAPKIGLSPNPILETNPAV*MTTCDP Trigger: TGGATCACATGTGGTCATCCATACAGCTGGGTTGGT...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTGAGTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAATTTGTGGATGGTCTTTaGACTGGCCTTCCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRPELAPKIGLSPNPILEFVDGL*TGLPKH Trigger: GTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAA...TTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAACTCAGGCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTATGGATGACCACATGTaGTCCAGACATGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSSLLEKLETGRGSETIMDDHM*SRHGCC Trigger: GCAGCAGCCATGTCTGGATCACATGTGGTCATCCAT...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATCCAGACATGGCTGCTaGCACCTCATGGGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEEANNVIGEFVRRGKTSRHGC*HLMGLS Trigger: ACTCAGGCCCATGAGGTGGCAGCAGCCATGTCTGGA...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGAGACCAGGTACTGAGTaGCAGTCTGCACACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLRPGTE*QSAHKH Trigger: ATGCTTGTGTGCAGACTGGCACTCAGTACCTGGTCT...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTAGACCAGGTACTGAGTaGCAGTCTGCACACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSHFSSSRFGGSGPGVCRPGTE*QSAHKH Trigger: ATGCTTGTGTGCAGACTGGCACTCAGTACCTGGTCT...ACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGATGGGGTATCTTCATTaGCCCTGTAGAAGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEEMGYLH*PCRRGG Trigger: GCCACCCCTTCTACAGGGGCAATGAAGATACCCCAT...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTGGGATGGCTGTGGACTaGCTCATATGGGGTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSSLLEKLETGRGSETIGMAVD*LIWGIF Trigger: GAAGATACCCCATATGAGGCAGTCCACAGCCATCCC...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCACATCACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCGGGATGGCTGTGGACTaGCTCATATGGGGTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPHHGVMMCRAESSSSKGGMAVD*LIWGIF Trigger: GAAGATACCCCATATGAGGCAGTCCACAGCCATCCC...GCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTGATGTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGAAATCGGGCGGAGCAGCCACTaGAGCAGGGCATTGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EANNVIGEFVRRGKTWEIGRSSH*SRALRV Trigger: TACCCTCAATGCCCTGCTGCAGTGGCTGCTCCGCCC...GATTTCCCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCACATGTGATCCAGACATaGCTGCTGCCACCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRPFPKPYPRTRRLEYEPHVIQT*LLPPHG Trigger: CCCATGAGGTGGCAGCAGCCATGTCTGGATCACATG...TGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGGATGGTCTTTGGACTaGCCTTCCCAAACACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKAAISLHPDLGAQDLEYGWSLD*PSQTHP Trigger: TGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCC...ATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGAGGATGGTCTTTGGACTaGCCTTCCCAAACACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVSVPPCLRNWKQEEVVRGWSLD*PSQTHP Trigger: TGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCC...TCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGTGCACGTTGACTTTGTaGATGGTCTTTGGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLCTLTL*MVFGLA Trigger: GGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCA...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGAAGGGCTTTACTGCATaGGTAGGGATGGCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEEKGFTA*VGMAVD Trigger: GTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTCACCATAAATGCCCGTaGGTCGAAGGGCACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSSLLEKLETGRGSETIHHKCP*VEGHMS Trigger: TGACATGTGCCCTTCGACCCACGGGCATTTATGGTG...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACAGTCCCTTCCTTCCATTaGCCTCGAGGACCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEEANNVIGEFVRRGKTVPSFH*PRGPAA Trigger: AGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGGAC...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGTTGCCTTCCTTCCATTaGCCTCGAGGACCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEEANNVIGEFVRRGKTWLPSFH*PRGPAA Trigger: AGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGCAA...CCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| 3UTR CAA 72 bp | CAGCGTAAGATCTCTGGAGTCTCTGTTCCTCCCTGCTaGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRKISGVSVPPC*RNWKQEEVVRP Trigger: TGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTTACGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| 3UTR CAA 72 bp | GCATCAATCACATTCTGTGTGCCCTGCACGTTGACTTaGTGGATGGTCTTTGGACTGGCCTTCCCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ASITFCVPCTLT*WMVFGLAFPNT Trigger: TGTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| 3UTR CAA 72 bp | ACACAAGCATCAATCACATTCTGTGTGCCCTGCACGTaGACTTTGTGGATGGTCTTTGGACTGGCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQASITFCVPCT*TLWMVFGLAFP Trigger: TGGGAAGGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGATGGATGACCACATGTaGTCCAGACATGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEEANNVIGEFVRRGKTWMDDHM*SRHGCC Trigger: GCAGCAGCCATGTCTGGATCACATGTGGTCATCCAT...CCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCACATCACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCGCATCCAAGCAACATTaGCTTCCTTCCATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPHHGVMMCRAESSSSKGASKQH*LPSIGL Trigger: GAGGCCAATGGAAGGAAGGCAATGTTGCTTGGATGC...GCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTGATGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGACCAACCCAGCTGTATaGATGACCACATGTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPKIGLSPNPILELGDWTNPAV*MTTCDP Trigger: TGGATCACATGTGGTCATCCATACAGCTGGGTTGGT...CCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGGATGGTCTTTGGACTaGCCTTCCCAAACACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEEGWSLD*PSQTHP Trigger: TGGATGTGTTTGGGAAGGCCAGTCCAAAGACCATCC...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGGGCTTGTAGCCAAAATGCCGCTGTGCCTTGTTGGTACTGACAGTAAATTTGTGGATGGTCTTTaGACTGGCCTTCCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: EEGLVAKMPLCLVGTDSKFVDGL*TGLPKH Trigger: GTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAA...TTTACTGTCAGTACCAACAAGGCACAGCGGCATTTTGGCTACAAGCCCCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAGCCATTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTAGTAGAAGTCTCTCATaGCCTGATGACCTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSHFSSSRFGGSGPGVCSRSLS*PDDLHH Trigger: ATGGTGAAGGTCATCAGGTCATGAGAGACTTCTACT...ACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAATGGCTGCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGCATCCAAGCAACATTaGCAACATAGACCCGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GEEANNVIGEFVRRGKTWASKQH*QHRPDR Trigger: ACGGTCGGGTCTATGTTGGCAATGTTGCTTGGATGC...CCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCTCTGGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGTTTGTGGATGGTCTTTaGACTGGCCTTCCCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KISGVSVPPCLRNWKQEEFVDGL*TGLPKH Trigger: GTGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAA...CTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCCAGAGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGGGAAATGGGGTATCTTCATTaGCCCTGTAGAAGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEANNVIGEFVRRGKTWEMGYLH*PCRRGG Trigger: GCCACCCCTTCTACAGGGGCAATGAAGATACCCCAT...TTCCCATGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACAGCATCCAAGCAACATTaGCAACATAGACCCGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEEANNVIGEFVRRGKTASKQH*QHRPDR Trigger: ACGGTCGGGTCTATGTTGGCAATGTTGCTTGGATGC...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACATGCACGTTGACTTTGTaGATGGTCTTTGGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGEEANNVIGEFVRRGKTCTLTL*MVFGLA Trigger: GGCCAGTCCAAAGACCATCCACAAAGTCAACGTGCA...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCAGTCTCATCAGAAACTCCATGTTaGAGTCCTCGTAGCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFPKPYPRTRRLEYEPVSSETPC*SPRSFY Trigger: ATAAAAGCTACGAGGACTTCAACATGGAGTTTCTGA...TGAGACTGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR TCA 90 bp | GATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCATCAGAAACTCCATGTTaGAGTCCTCGTAGCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DRPFPKPYPRTRRLEYEPSETPC*SPRSFY Trigger: ATAAAAGCTACGAGGACTTCAACATGGAGTTTCTGA...TGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS GCA 90 bp | ACCTGCACAGGCCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGCTCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TCTGPAFSSSSQELR*RSKTRSSRSLGSRS Trigger: GGAACGGGAGCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGGCCTGTGCAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 ENSMUST00000125188.8 ENSMUST00000138432.2 |
||
| CDS TCA 90 bp | TGCCCGTGGGTCGAAGGGCACATGTCACCAGGGGTAGCCCTCCATTaGCCTTCCTTCCATTGGCCTCGAGGACCAGCTGCTCAGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPWVEGHMSPGVALH*PSFHWPRGPAAQQG Trigger: CCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCTGGTGACATGTGCCCTTCGACCCACGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS CCA 90 bp | CGGCCCGAAATAGACGACCTCCAAAGCGCAGTCCCCTCTCCACCGTaGGCTGGAGATGGATGCAAAGAAGCCTGGGACTCAGGCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPEIDDLQSAVPSPP*AGDGCKEAWDSGSA Trigger: GGCAGAGCCTGAGTCCCAGGCTTCTTTGCATCCATCTCCAGCCCACGGTGGAGAGGGGACTGCGCTTTGGAGGTCGTCTATTTCGGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS GCA 90 bp | ACATTCTGTGTGCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGCTCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFCVPAFSSSSQELR*RSKTRSSRSLGSRS Trigger: GGAACGGGAGCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGCACACAGAATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139068.8 |
||
| CDS GCA 90 bp | ATCTTCATTGCCCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGCTCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFIAPAFSSSSQELR*RSKTRSSRSLGSRS Trigger: GGAACGGGAGCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGGGCAATGAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS GCA 90 bp | AAGCCTGGGACTCAGGCTCTGCCCCTGCAGCTCAAGTCCCATCTTTaGAGTGTACCTTCCTTCCATTGGCCTCGAGGACCAGCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPGTQALPLQLKSHL*SVPSFHWPRGPAAQ Trigger: CTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTACACTGCAAAGATGGGACTTGAGCTGCAGGGGCAGAGCCTGAGTCCCAGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS CCA 90 bp | CGGGCCACCAGTATGTGCATCCAAGCAACATTGCCTTCCTTCCATTaGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTGCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RATSMCIQATLPSFH*PRGPAAQQGLYCMG Trigger: ACCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGCAATGTTGCTTGGATGCACATACTGGTGGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS GCA 90 bp | CTGCTCAGCAAGGGCTTTACTGCATGGGTAGGGATGGCTGTGGACTaGCTCATATGGGGTATCTTCATTGCCCCTGCTTTCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSKGFTAWVGMAVD*LIWGIFIAPAFSSS Trigger: GGAGGAGCTGAAAGCAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTTGCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS-3UTR CAA 90 bp | TCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTGCCGCTGTGCCTTGTaGGTACTGACAGTAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRFGGSGPGVCATVVSSCRCAL*VLTVKV Trigger: CACCTTTACTGTCAGTACCAACAAGGCACAGCGGCA...ACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS TCA 90 bp | ATAGACGACCTCCAAAGCGCAGTCCCTGGTAGTAGAAGTCTCTCATaGCCTGATGACCTTCACCATAAATGCCCGTGGGTCGAAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IDDLQSAVPGSRSLS*PDDLHHKCPWVEGH Trigger: GTGCCCTTCGACCCACGGGCATTTATGGTGAAGGTCATCAGGTCATGAGAGACTTCTACTACCAGGGACTGCGCTTTGGAGGTCGTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS CCA 90 bp | AAGGGCTTTACTGCATGGGTAGGGATGGCTGTGGACTGCCTCATATaGGGTATCTTCATTGCCCCTGCTTTCAGCTCCTCCAGCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KGFTAWVGMAVDCLI*GIFIAPAFSSSSQE Trigger: TTCTTGGCTGGAGGAGCTGAAAGCAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS-3UTR CAA 90 bp | CATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCTCCAGTTTGTGTGCCCTGCACGTaGACTTTGTGGATGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HPDLGAQDLEYVPQWSPVCVPCT*TLWMVF Trigger: AAAGACCATCCACAAAGTCAACGTGCAGGGCACACA...AACTGGAGACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTCTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGAATTGCCTTCCTTCCATaGGCCTCGAGGACCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVSVPPCLRNWKQEEVVRIAFLP*ASRTSC Trigger: GCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGCAAT...TCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTTCATCCAGATTTGGGGGCTCAGGACCTGGAGTATGTGCCACAGTGGTCCCTGCACGTTGACTTaGTGGATGGTCTTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFIQIWGLRTWSMCHSGPCTLT*WMVFGL Trigger: CAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGG...ACCACTGTGGCACATACTCCAGGTCCTGAGCCCCCAAATCTGGATGAAGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTTTGACCTTCCTTCCATaGGCCTCGAGGACCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LCSSLLEKLETGRGSETILTFLP*ASRTSC Trigger: GCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAA...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS-3UTR CAA 90 bp | GATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCAAGTCCCTTCCTTCCATaGGCCTCGAGGACCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DRPFPKPYPRTRRLEYEPSPFLP*ASRTSC Trigger: GCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGGACT...TGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCATCAATCACATTCTGTGTGCCCTGCACGTTGACTTTGTGGATGGTCTTTAGCCAGCTGCTGAGTTaGGCCTGTCCACACCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QASITFCVPCTLTLWMVFSQLLS*ACPHPA Trigger: AGCAGGGTGTGGACAGGCCAAACTCAGCAGCTGGCT...AAAGACCATCCACAAAGTCAACGTGCAGGGCACACAGAATGTGATTGATGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| CDS-3UTR CAA 90 bp | GTTGGCACCAAAGATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGCTTTGTGGATGGTCTTaGGACTGGCCTTCCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: VGTKDRPFPKPYPRTRRLLCGWS*DWPSQT Trigger: TGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAG...CAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATCTTTGGTGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTCCCTGCACGTTGACTTaGTGGATGGTCTTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LCSSLLEKLETGRGSETIPCTLT*WMVFGL Trigger: CAGTCCAAAGACCATCCACAAAGTCAACGTGCAGGG...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGGAGGAAGCTAACAATGTCATAGGTGAATTTGTTAGGAGAGGCAAGACAAGGGGTAGCCCTCCATaGACCTTCCTTCCATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGEEANNVIGEFVRRGKTRGSPP*TFLPLA Trigger: GGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCT...TGTCTTGCCTCTCCTAACAAATTCACCTATGACATTGTTAGCTTCCTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS-3UTR CAA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTCTTTGTGGATGGTCTTaGGACTGGCCTTCCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LCSSLLEKLETGRGSETILCGWS*DWPSQT Trigger: TGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAG...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGTTCCTCCCTGCTTGAGAAACTGGAAACAGGAAGAGGTAGTGAGACCATTTGTGTGCCCTGCACGTaGACTTTGTGGATGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LCSSLLEKLETGRGSETICVPCT*TLWMVF Trigger: AAAGACCATCCACAAAGTCAACGTGCAGGGCACACA...AATGGTCTCACTACCTCTTCCTGTTTCCAGTTTCTCAAGCAGGGAGGAACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CACGGAGTCATGATGTGTAGAGCAGAGTCTTCATCTTCAAAAGGCAGCCATTTCTGCCGCTGTGCCTTGTaGGTACTGACAGTAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGVMMCRAESSSSKGSHFCRCAL*VLTVKV Trigger: CACCTTTACTGTCAGTACCAACAAGGCACAGCGGCA...GAAATGGCTGCCTTTTGAAGATGAAGACTCTGCTCTACACATCATGACTCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | GATAGGCCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCACTTTGTGGATGGTCTTaGGACTGGCCTTCCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: DRPFPKPYPRTRRLEYEPLCGWS*DWPSQT Trigger: TGTTTGGGAAGGCCAGTCCAAAGACCATCCACAAAG...TGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGGCCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCCCAAACCCTATCCTAGAACTAGGAGACTGGAATATGAACCAGTCTCATGTGTGCCCTGCACGTaGACTTTGTGGATGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PFPKPYPRTRRLEYEPVSCVPCT*TLWMVF Trigger: AAAGACCATCCACAAAGTCAACGTGCAGGGCACACA...TGAGACTGGTTCATATTCCAGTCTCCTAGTTCTAGGATAGGGTTTGGGGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS TCA 90 bp | GGGACTCAGAAACTCCATGTTGAAGTCCTCGTAGCTTTTATAAGGTaGCTTATCATAGCAGAAATACACCTGGCCACCCATGAGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTQKLHVEVLVAFIR*LIIAEIHLATHECC Trigger: GCAGCACTCATGGGTGGCCAGGTGTATTTCTGCTATGATAAGTCACCTTATAAAAGCTACGAGGACTTCAACATGGAGTTTCTGAGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS TCA 90 bp | GGGCGCCTATCAGTCGAAGACCACAGGGACTCAGAAACTCCATGTTaGAGTCCTCGTAGCTTTTATAAGGTGACTTATCATAGCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRLSVEDHRDSETPC*SPRSFYKVTYHSRN Trigger: ATTTCTGCTATGATAAGTCACCTTATAAAAGCTACGAGGACTTCAACATGGAGTTTCTGAGTCCCTGTGGTCTTCGACTGATAGGCGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS GCA 72 bp | GGCCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPAFSSSSQELR*RSKTRSSRSLG Trigger: GCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 ENSMUST00000125188.8 ENSMUST00000138432.2 |
||
| CDS GCA 72 bp | GCCCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: APAFSSSSQELR*RSKTRSSRSLG Trigger: GCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS GCA 72 bp | GTGCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VPAFSSSSQELR*RSKTRSSRSLG Trigger: GCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139068.8 |
||
| CDS GCA 72 bp | CACCCTGCTTTCAGCTCCTCCAGCCAAGAACTCAGGTaGAGGTCAAAGACACGCAGCTCCCGGAGCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPAFSSSSQELR*RSKTRSSRSLG Trigger: GCCCAGGCTCCGGGAGCTGCGTGTCTTTGACCTGCACCTGAGTTCTTGGCTGGAGGAGCTGAAAGCAGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155005.3 |
||
| CDS CAA 90 bp | ATGCCCGTGGGTCGAAGGGCACATGTCACCAGGGGTAGCCCTCCATaGACCTTCCTTCCATTGGCCTCGAGGACCAGCTGCTCAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MPVGRRAHVTRGSPP*TFLPLASRTSCSAR Trigger: CCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCTGGTGACATGTGCCCTTCGACCCACGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS CAA 90 bp | CGCTGCTCCAGCTCCCGGGCCACCAGTATGTGCATCCAAGCAACATaGCCTTCCTTCCATTGGCCTCGAGGACCAGCTGCTCAGCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RCSSSRATSMCIQAT*PSFHWPRGPAAQQG Trigger: CCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGCAATGTTGCTTGGATGCACATACTGGTGGCCCGGGAGCTGGAGCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS GCA 72 bp | GCTGCCCGCTGCTCCAGCTCCCGGGCCACCAGTATGTaGATCCAAGCAACATTGCCTTCCTTCCATTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AARCSSSRATSM*IQATLPSFHWP Trigger: AGGCCAATGGAAGGAAGGCAATGTTGCTTGGATGCACATACTGGTGGCCCGGGAGCTGGAGCAGCGGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS CAA 72 bp | GGTCGAAGGGCACATGTCACCAGGGGTAGCCCTCCATaGACCTTCCTTCCATTGGCCTCGAGGACCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRRAHVTRGSPP*TFLPLASRTSC Trigger: GCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCTGGTGACATGTGCCCTTCGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS TCA 72 bp | GTCGAAGGGCACATGTCACCAGGGGTAGCCCTCCATTaGCCTTCCTTCCATTGGCCTCGAGGACCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VEGHMSPGVALH*PSFHWPRGPAA Trigger: AGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTCAATGGAGGGCTACCCCTGGTGACATGTGCCCTTCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS GCA 72 bp | ATCATAGCAGAAATACACCTGGCCACCCATGAGTGCTaGCCGCTGCTCCAGCTCCCGGGCCACCAGTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: IIAEIHLATHEC*PLLQLPGHQYV Trigger: CACATACTGGTGGCCCGGGAGCTGGAGCAGCGGGCAGCACTCATGGGTGGCCAGGTGTATTTCTGCTATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||
| CDS CAA 90 bp | ACGGCCCGAAATAGACGACCTCCAAAGCGCAGTCCCTTCCTTCCATaGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: TARNRRPPKRSPFLP*ASRTSCSARALLHG Trigger: CCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGGACTGCGCTTTGGAGGTCGTCTATTTCGGGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106272.8 |
||
| CDS CAA 90 bp | GAAGCCTGGGACTCAGGCTCTGCCCCTGCAGCTCAAGTCCCATCTTaGCAGTGTACCTTCCTTCCATTGGCCTCGAGGACCAGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EAWDSGSAPAAQVPS*QCTFLPLASRTSCS Trigger: TGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTACACTGCAAAGATGGGACTTGAGCTGCAGGGGCAGAGCCTGAGTCCCAGGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS CAA 90 bp | GCCCCTGCAGCTCAAGTCCCATCTTTGCAGTGTACCTTCCTTCCATaGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTACTGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: APAAQVPSLQCTFLP*ASRTSCSARALLHG Trigger: CCCATGCAGTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTACACTGCAAAGATGGGACTTGAGCTGCAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS GCA 72 bp | GCTCCCGGGCCACCAGTATGTGCATCCAAGCAACATTaGCAACATAGACCCGACCGTGCTCCACAGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APGPPVCASKQH*QHRPDRAPQKL Trigger: CAGCTTCTGTGGAGCACGGTCGGGTCTATGTTGGCAATGTTGCTTGGATGCACATACTGGTGGCCCGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS CAA 72 bp | AGCTCCCGGGCCACCAGTATGTGCATCCAAGCAACATaGCCTTCCTTCCATTGGCCTCGAGGACCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRATSMCIQAT*PSFHWPRGPAA Trigger: AGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGCAATGTTGCTTGGATGCACATACTGGTGGCCCGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS CCA 72 bp | ATAGACGACCTCCAAAGCGCAGTCCCTTCCTTCCATTaGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: IDDLQSAVPSFH*PRGPAAQQGLY Trigger: GTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGGACTGCGCTTTGGAGGTCGTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106272.8 |
||
| CDS CCA 72 bp | ACTGCATGGGTAGGGATGGCTGTGGACTGCCTCATATaGGGTATCTTCATTGCCCCTGCTTTCAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAWVGMAVDCLI*GIFIAPAFSSS Trigger: GGAGGAGCTGAAAGCAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS CAA 72 bp | AATAGACGACCTCCAAAGCGCAGTCCCTTCCTTCCATaGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: NRRPPKRSPFLP*ASRTSCSARAL Trigger: TAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGGACTGCGCTTTGGAGGTCGTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106272.8 |
||
| CDS CCA 72 bp | CTCAAGTCCCATCTTTGCAGTGTACCTTCCTTCCATTaGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LKSHLCSVPSFH*PRGPAAQQGLY Trigger: GTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTACACTGCAAAGATGGGACTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS CAA 72 bp | GCTCAAGTCCCATCTTTGCAGTGTACCTTCCTTCCATaGGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: AQVPSLQCTFLP*ASRTSCSARAL Trigger: TAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGTACACTGCAAAGATGGGACTTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS TCA 72 bp | CTCCAAAGCGCAGTCCCTGGTAGTAGAAGTCTCTCATaGCCTGATGACCTTCACCATAAATGCCCGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSAVPGSRSLS*PDDLHHKCPWV Trigger: GACCCACGGGCATTTATGGTGAAGGTCATCAGGTCATGAGAGACTTCTACTACCAGGGACTGCGCTTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046863.12 |
||
| CDS GCA 72 bp | AAGGGCTTTACTGCATGGGTAGGGATGGCTGTGGACTaGCTCATATGGGGTATCTTCATTGCCCCTGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KGFTAWVGMAVD*LIWGIFIAPAF Trigger: GAAAGCAGGGGCAATGAAGATACCCCATATGAGGCAGTCCACAGCCATCCCTACCCATGCAGTAAAGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206674.2 |
||
| CDS CCA 72 bp | AGTATGTGCATCCAAGCAACATTGCCTTCCTTCCATTaGCCTCGAGGACCAGCTGCTCAGCAAGGGCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SMCIQATLPSFH*PRGPAAQQGLY Trigger: GTAAAGCCCTTGCTGAGCAGCTGGTCCTCGAGGCCAATGGAAGGAAGGCAATGTTGCTTGGATGCACATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106271.2 |
||
| CDS CAA 72 bp | ACAATATGTTCCCCCAGGAAGCCGCAGCCACTAGAATaGCCTGGTAGCACCTGCTCCAACCATGTGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TICSPRKPQPLE*PGSTCSNHVFF Trigger: GAAGAACACATGGTTGGAGCAGGTGCTACCAGGCAATTCTAGTGGCTGCGGCTTCCTGGGGGAACATATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138432.2 |
||
| CDS TCA 72 bp | TCAGTCGAAGACCACAGGGACTCAGAAACTCCATGTTaGAGTCCTCGTAGCTTTTATAAGGTGACTTATCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVEDHRDSETPC*SPRSFYKVTYH Trigger: ATGATAAGTCACCTTATAAAAGCTACGAGGACTTCAACATGGAGTTTCTGAGTCCCTGTGGTCTTCGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046863.12 ENSMUST00000106272.8 |
||
| CDS TCA 72 bp | AAACTCCATGTTGAAGTCCTCGTAGCTTTTATAAGGTaGCTTATCATAGCAGAAATACACCTGGCCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KLHVEVLVAFIR*LIIAEIHLATH Trigger: ATGGGTGGCCAGGTGTATTTCTGCTATGATAAGTCACCTTATAAAAGCTACGAGGACTTCAACATGGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046863.12 ENSMUST00000106271.2 ENSMUST00000106272.8 |
||