Pregenerated sensors for HSD3B6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027869Ensembl transcript IDs: ENSMUST00000029463.13, ENSMUST00000170847.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGCTTGGACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTaGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACT | + |
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Preference number: 1 (lower is better) Translates to: RGLDPGAGAQMPVCL*GGISERRLVAGSVT Trigger: AGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGTCCAAGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CCA 90 bp | GTCAGTGACTGGCAAGGCTTTGGTGACTTGATTAAGGCACTAAATTaGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: VSDWQGFGDLIKALN*PLCQKKAAAPVLCF Trigger: AAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAAGTCACCAAAGCCTTGCCAGTCACTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CAA 90 bp | GAGAGGCTTGGACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTaGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ERLGPRSWGTDACVS*GRYFRKKACGWVSD Trigger: GTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGTCCAAGCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CAA 90 bp | TTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTaGTCCTTACTGGAGGACCTGGTAACACCCAGAGCCATGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LASVSKEGSSTCVVL*SLLEDLVTPRAMSP Trigger: TGGAGACATGGCTCTGGGTGTTACCAGGTCCTCCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATAAAGCAAGTAGAATTTTCTGAAGGCTATACATGCTCTGAATGGGGAGAGGCAGCACCTGTGTTGTaGTTTTGTCCTTACTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FIKQVEFSEGYTCSEWGEAAPVL*FCPYWR Trigger: CCTCCAGTAAGGACAAAAGCACAACACAGGTGCTGC...CTCTCCCCATTCAGAGCATGTATAGCCTTCAGAAAATTCTACTTGCTTTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGGCAGCAGCACCTGTGTaGTGCTTTTGTCCTTACTGG | + |
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Preference number: 3 (lower is better) Translates to: GESSEVQEVLRGLDPGAGAAAPV*CFCPYW Trigger: CCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGC...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CCA 72 bp | GACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTaGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: DPGAGAQMPVCL*GGISERRLVAG Trigger: CCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CCA 72 bp | TGGCAAGGCTTTGGTGACTTGATTAAGGCACTAAATTaGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTG | + |
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Preference number: 3 (lower is better) Translates to: WQGFGDLIKALN*PLCQKKAAAPV Trigger: CACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAAGTCACCAAAGCCTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CCA 72 bp | TCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTaGGTCAGTGACTGGCAAGGCTTTGGTGACTTGATT | + |
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Preference number: 3 (lower is better) Translates to: SLGRYFRKKACG*VSDWQGFGDLI Trigger: AATCAAGTCACCAAAGCCTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CCA 72 bp | TATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTaGCAAGGCTTTGGTGACTTGATTAAGGCACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: YFRKKACGWVSD*QGFGDLIKALN Trigger: ATTTAGTGCCTTAATCAAGTCACCAAAGCCTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGCACCAATTTTCAGCATaGTCCCATTGGCTGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GESSEVQEVLRGLDPGAGHQFSA*SHWLPA Trigger: TGCTGGCAGCCAATGGGAGCATGCTGAAAATTGGTG...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| 3UTR CAA 72 bp | GGACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTaGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPRSWGTDACVS*GRYFRKKACGW Trigger: CCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | GGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCATGCTCCCATTGGCTaGCAGCACTGCCTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAGAQMPVCLWGGISERRHAPIG*QHCLLS Trigger: GCTGAGAAGGCAGTGCTGGCAGCCAATGGGAGCATG...CCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGGCTTTCCTCAGGTACTaGGTGTCAAGAATGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GESSEVQEVLRGLDPGAGAFLRY*VSRMSP Trigger: AGGAGACATTCTTGACACCCAGTACCTGAGGAAAGC...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGATGACAGCTGCAGTGTaGATAACAACAGAGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: GESSEVQEVLRGLDPGAGMTAAV*ITTEMP Trigger: GGGCATCTCTGTTGTTATCCACACTGCAGCTGTCAT...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGATACTGGGTTGGCTGTaGAGAATTTGCCCGTACAAC | + |
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Preference number: 4 (lower is better) Translates to: GESSEVQEVLRGLDPGAGILGWL*RICPYN Trigger: GTTGTACGGGCAAATTCTCCACAGCCAACCCAGTAT...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGCCCTGCAACATCAACTaGGCTGGAGAAGATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRSWGTDACVSLGRYFRKPCNIN*AGEDEG Trigger: GCCTTCATCTTCTCCAGCTCAGTTGATGTTGCAGGG...CTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | ACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAACCCTGCAACATCAACTaGGCTGGAGAAGATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TQELGHRCLCVFGEVFQKPCNIN*AGEDEG Trigger: GCCTTCATCTTCTCCAGCTCAGTTGATGTTGCAGGG...TTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | TCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAACATGCTCCCATTGGCTaGCAGCACTGCCTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLGRYFRKKACGWVSDWQHAPIG*QHCLLS Trigger: GCTGAGAAGGCAGTGCTGGCAGCCAATGGGAGCATG...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTCCCTGGTTTCTGGTCTaGAGAACTTGTCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: VCLWGGISERRLVAGSVTPWFLV*RTCPGP Trigger: GGGTCCTGGACAAGTTCTTCAGACCAGAAACCAGGG...AGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGATTACCCACATATACTaGGTTGGCTGTGGAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: GESSEVQEVLRGLDPGAGITHIY*VGCGEF Trigger: AAATTCTCCACAGCCAACCCAGTATATGTGGGTAAT...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTCTGAGCTGGAGAAGATaGAGGCTGGAACACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VCLWGGISERRLVAGSVTLSWRR*RLEHWL Trigger: AAGCCAGTGTTCCAGCCTTCATCTTCTCCAGCTCAG...AGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | GGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCACCAATTTTCAGCATaGTCCCATTGGCTGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GHRCLCVFGEVFQKEGLWHQFSA*SHWLPA Trigger: TGCTGGCAGCCAATGGGAGCATGCTGAAAATTGGTG...CCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGGCTGGAACACTGGCTTaGATACAGGCCTCCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: PVCLWGGISERRLVAGSVAGTLA*IQASNK Trigger: CTTATTGGAGGCCTGTATCCAAGCCAGTGTTCCAGC...CACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | CTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCCTGGTTTCTGGTCTaGAGAACTTGTCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: LNWPLCQKKAAAPVLCFCPWFLV*RTCPGP Trigger: GGGTCCTGGACAAGTTCTTCAGACCAGAAACCAGGG...ACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGTCCAGATCTTTCTCCTaGATCAACAACTGGACAATC | + |
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Preference number: 4 (lower is better) Translates to: PRSWGTDACVSLGRYFRKSRSFS*INNWTI Trigger: GATTGTCCAGTTGTTGATGCAGGAGAAAGATCTGGA...CTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | GGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGGCTTTCCTCAGGTACTaGGTGTCAAGAATGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GHRCLCVFGEVFQKEGLWAFLRY*VSRMSP Trigger: AGGAGACATTCTTGACACCCAGTACCTGAGGAAAGC...CCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGTGTTTGTATCTAGGTTaGAGAATTGCTCCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PRSWGTDACVSLGRYFRKCLYLG*RIAPWF Trigger: AAACCAGGGAGCAATTCTTCAACCTAGATACAAACA...CTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | ACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAATCCAGATCTTTCTCCTaGATCAACAACTGGACAATC | + |
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Preference number: 4 (lower is better) Translates to: TQELGHRCLCVFGEVFQKSRSFS*INNWTI Trigger: GATTGTCCAGTTGTTGATGCAGGAGAAAGATCTGGA...TTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | GGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGTCTAGGTTGAAGAATTaGTCCCTGGTTTCTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GHRCLCVFGEVFQKEGLWSRLKN*SLVSGL Trigger: CAGACCAGAAACCAGGGAGCAATTCTTCAACCTAGA...CCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCTTACTGGTTGCTCCCTGGTTTCTaGTCTGAAGAACTTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLCQKKAAAPVLCFCPYWLLPGF*SEELVQ Trigger: CTGGACAAGTTCTTCAGACCAGAAACCAGGGAGCAA...CCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCTTACTGGTCCTTGGATATTTGGTaGCTTTTTGGGGTCTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLCQKKAAAPVLCFCPYWSLDIW*LFGVSK Trigger: CTTCGAGACCCCAAAAAGTCACCAAATATCCAAGGA...CCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTTCACAGTTTCCAGCATaGATGCAAGCCAGTACAGTA | + |
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Preference number: 4 (lower is better) Translates to: VCLWGGISERRLVAGSVTSQFPA*MQASTV Trigger: TACTGTACTGGCTTGCATTCATGCTGGAAACTGTGA...AGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | TCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAATCTAGGTTGAAGAATTaGTCCCTGGTTTCTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLGRYFRKKACGWVSDWQSRLKN*SLVSGL Trigger: CAGACCAGAAACCAGGGAGCAATTCTTCAACCTAGA...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | TTGATTAAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGGCTGGAACACTGGCTTaGATACAGGCCTCCAATAAG | + |
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Preference number: 4 (lower is better) Translates to: LIKALNWPLCQKKAAAPVAGTLA*IQASNK Trigger: CTTATTGGAGGCCTGTATCCAAGCCAGTGTTCCAGC...CACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | ATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCTTATACTGGGTTGGCTGTaGAGAATTTGCCCGTACAAC | + |
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Preference number: 4 (lower is better) Translates to: IGLCVKRRQQHLCCAFVLILGWL*RICPYN Trigger: GTTGTACGGGCAAATTCTCCACAGCCAACCCAGTAT...AAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | ACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGCCACATATACTGGGTTaGCTGTGGAGAATTTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TKLASVSKEGSSTCVVLLPHILG*LWRICP Trigger: CGGGCAAATTCTCCACAGCCAACCCAGTATATGTGG...CAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | CCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGTGTTTGTATCTAGGTTaGAGAATTGCTCCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PVCLWGGISERRLVAGSVCLYLG*RIAPWF Trigger: AAACCAGGGAGCAATTCTTCAACCTAGATACAAACA...CACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | AAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCGATGCTCTTCCTCGTTaGCATTCAGGATTATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLASVSKEGSSTCVVLLSDALPR*HSGLSP Trigger: AGGAGATAATCCTGAATGGCAACGAGGAAGAGCATC...GGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | AAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCCACAAGTATGCAAAGTaGCACCAATTTTCAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: KALNWPLCQKKAAAPVLCHKYAK*HQFSAC Trigger: GCATGCTGAAAATTGGTGGCACTTTGCATACTTGTG...GCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | ACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTTGCTCCCTGGTTTCTaGTCTGAAGAACTTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TKLASVSKEGSSTCVVLLLLPGF*SEELVQ Trigger: CTGGACAAGTTCTTCAGACCAGAAACCAGGGAGCAA...CAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAACCCCATAAATATACATaGGCCTTAATGCACAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: TQELGHRCLCVFGEVFQKPHKYT*ALMHKY Trigger: ATACTTGTGCATTAAGGCCCATGTATATTTATGGGG...TTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | ACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCACAGTTTCCAGCATaGATGCAAGCCAGTACAGTA | + |
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Preference number: 4 (lower is better) Translates to: TKLASVSKEGSSTCVVLLSQFPA*MQASTV Trigger: TACTGTACTGGCTTGCATTCATGCTGGAAACTGTGA...CAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | CTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCTTACTGGAGGATTACCCACATATACTaGGTTGGCTGTGGAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: LCQKKAAAPVLCFCPYWRITHIY*VGCGEF Trigger: AAATTCTCCACAGCCAACCCAGTATATGTGGGTAAT...CCTCCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | AAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTATAAATCTGTAGATTaGACTCAGCAGGAAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KALNWPLCQKKAAAPVLCYKSVD*TQQEAH Trigger: GTGAGCTTCCTGCTGAGTCCAATCTACAGATTTATA...GCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR GCA 90 bp | TTGATTAAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGCACAAGTATGCAAAGTaGCACCAATTTTCAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: LIKALNWPLCQKKAAAPVHKYAK*HQFSAC Trigger: GCATGCTGAAAATTGGTGGCACTTTGCATACTTGTG...CACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | AAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCCCCCATAAATATACATaGGCCTTAATGCACAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: KALNWPLCQKKAAAPVLCPHKYT*ALMHKY Trigger: ATACTTGTGCATTAAGGCCCATGTATATTTATGGGG...GCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | TTCATAAAGCAAGTAGAATTTTCTGAAGGCTATACATGCTCTGAATGGGGAGAGCCACATATACTGGGTTaGCTGTGGAGAATTTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FIKQVEFSEGYTCSEWGEPHILG*LWRICP Trigger: CGGGCAAATTCTCCACAGCCAACCCAGTATATGTGG...CTCTCCCCATTCAGAGCATGTATAGCCTTCAGAAAATTCTACTTGCTTTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CCA 90 bp | CTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTTATAAATCTGTAGATTaGACTCAGCAGGAAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LNWPLCQKKAAAPVLCFCYKSVD*TQQEAH Trigger: GTGAGCTTCCTGCTGAGTCCAATCTACAGATTTATA...ACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR TCA 90 bp | TTCATAAAGCAAGTAGAATTTTCTGAAGGCTATACATGCTCTGAATGGGGAGAGTCCTTGGATATTTGGTaGCTTTTTGGGGTCTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: FIKQVEFSEGYTCSEWGESLDIW*LFGVSK Trigger: CTTCGAGACCCCAAAAAGTCACCAAATATCCAAGGA...CTCTCCCCATTCAGAGCATGTATAGCCTTCAGAAAATTCTACTTGCTTTATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGCTCTGAGGTACAAGAGGTGCTGAGAGGCTTGGACCCAGGAGCTGGGTTCAGCATGCTCCCATaGGCTGCCAGCACTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GESSEVQEVLRGLDPGAGFSMLP*AASTAF Trigger: GAAGGCAGTGCTGGCAGCCAATGGGAGCATGCTGAA...CCCAGCTCCTGGGTCCAAGCCTCTCAGCACCTCTTGTACCTCAGAGCTCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | ACCCAGGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAATTCAGCATGCTCCCATaGGCTGCCAGCACTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TQELGHRCLCVFGEVFQKFSMLP*AASTAF Trigger: GAAGGCAGTGCTGGCAGCCAATGGGAGCATGCTGAA...TTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCCCACATATACTGGGTaGGCTGTGGAGAATTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GHRCLCVFGEVFQKEGLWPTYTG*AVENLP Trigger: GGGCAAATTCTCCACAGCCAACCCAGTATATGTGGG...CCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGTGGGTACCTTTCAGATaGACATCTAGGATGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: GAGAQMPVCLWGGISERRWVPFR*TSRMVC Trigger: GCAGACCATCCTAGATGTCAATCTGAAAGGTACCCA...CCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | CTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCTTACTGGAGGTGGGTACCTTTCAGATaGACATCTAGGATGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LCQKKAAAPVLCFCPYWRWVPFR*TSRMVC Trigger: GCAGACCATCCTAGATGTCAATCTGAAAGGTACCCA...CCTCCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | TTGATTAAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTGCCCACATATACTGGGTaGGCTGTGGAGAATTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LIKALNWPLCQKKAAAPVPTYTG*AVENLP Trigger: GGGCAAATTCTCCACAGCCAACCCAGTATATGTGGG...CACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTTCCAACACTGTCACCTaGATGTTTGTATCTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: VCLWGGISERRLVAGSVTSNTVT*MFVSRL Trigger: CAACCTAGATACAAACATCAAGGTGACAGTGTTGGA...AGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCACAGATGCCTGTGTGTCTTTGGGGAGGTATTTCAGAAAGAAGGCTTGTTCCAACACTGTCACCTaGATGTTTGTATCTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: WGTDACVSLGRYFRKKACSNTVT*MFVSRL Trigger: CAACCTAGATACAAACATCAAGGTGACAGTGTTGGA...ACAAGCCTTCTTTCTGAAATACCTCCCCAAAGACACACAGGCATCTGTGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS-3UTR CAA 90 bp | CTGTGTCAAAAGAAGGCAGCAGCACCTGTGTTGTGCTTTTGTCCTTACTGGAGGTTCTCAGCCATCTTTTaGCTGTATGGGTATGGATCA | + |
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Preference number: 5 (lower is better) Translates to: LCQKKAAAPVLCFCPYWRFSAIF*LYGYGS Trigger: TGATCCATACCCATACAGCAAAAAGATGGCTGAGAA...CCTCCAGTAAGGACAAAAGCACAACACAGGTGCTGCTGCCTTCTTTTGACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CCA 72 bp | CAGAATGTGTGCCCAGGCTACATTACCCACATATACTaGGTTGGCTGTGGAGAATTTGCCCGTACAACCGAG | + |
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Preference number: 6 (lower is better) Translates to: QNVCPGYITHIY*VGCGEFARTTE Trigger: CTCGGTTGTACGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGTAATGTAGCCTGGGCACACATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CCA 72 bp | TGTGTGCCCAGGCTACATTACCCACATATACTGGGTTaGCTGTGGAGAATTTGCCCGTACAACCGAGAATAT | + |
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Preference number: 6 (lower is better) Translates to: CVPRLHYPHILG*LWRICPYNREY Trigger: ATATTCTCGGTTGTACGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGTAATGTAGCCTGGGCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CAA 72 bp | TCCTCGTTGCCATTCAGGATTATCTCCTTGTATGAGTaGGGCCCTGCAACATCAACTGAGCTGGAGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SSLPFRIISLYE*GPATSTELEKM Trigger: CATCTTCTCCAGCTCAGTTGATGTTGCAGGGCCCAACTCATACAAGGAGATAATCCTGAATGGCAACGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CAA 72 bp | ATGTGTGCCCAGGCTACATTACCCACATATACTGGGTaGGCTGTGGAGAATTTGCCCGTACAACCGAGAATA | + |
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Preference number: 6 (lower is better) Translates to: MCAQATLPTYTG*AVENLPVQPRI Trigger: TATTCTCGGTTGTACGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGTAATGTAGCCTGGGCACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CAA 90 bp | GCCCAGGCTACATTACCCACATATACTGGGTTGGCTGTGGAGAATTaGCCCGTACAACCGAGAATATTCTTATTTTTGAGGGCCGTAATT | + |
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Preference number: 6 (lower is better) Translates to: AQATLPTYTGLAVEN*PVQPRIFLFLRAVI Trigger: AATTACGGCCCTCAAAAATAAGAATATTCTCGGTTGTACGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGTAATGTAGCCTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS GCA 72 bp | GATCAGACCATATGCTTTCATGATGCTCTTCCTCGTTaGCATTCAGGATTATCTCCTTGTATGAGTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: DQTICFHDALPR*HSGLSPCMSWA Trigger: GGCCCAACTCATACAAGGAGATAATCCTGAATGGCAACGAGGAAGAGCATCATGAAAGCATATGGTCTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CCA 72 bp | CCCAGGCTACATTACCCACATATACTGGGTTGGCTGTaGAGAATTTGCCCGTACAACCGAGAATATTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PRLHYPHILGWL*RICPYNREYSY Trigger: ATAAGAATATTCTCGGTTGTACGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGTAATGTAGCCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS GCA 72 bp | ACTGTCACCTTGATGTTTGTATCTAGGTTGAAGAATTaGTCCCTGGTTTCTGGTCTGAAGAACTTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TVTLMFVSRLKN*SLVSGLKNLSR Trigger: CCTGGACAAGTTCTTCAGACCAGAAACCAGGGAGCAATTCTTCAACCTAGATACAAACATCAAGGTGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CAA 72 bp | CCTTCCAACACTGTCACCTTGATGTTTGTATCTAGGTaGAAGAATTGCTCCCTGGTTTCTGGTCTGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: PSNTVTLMFVSR*KNCSLVSGLKN Trigger: GTTCTTCAGACCAGAAACCAGGGAGCAATTCTTCAACCTAGATACAAACATCAAGGTGACAGTGTTGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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| CDS CAA 72 bp | ACATTACCCACATATACTGGGTTGGCTGTGGAGAATTaGCCCGTACAACCGAGAATATTCTTATTTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLPTYTGLAVEN*PVQPRIFLFLR Trigger: CCTCAAAAATAAGAATATTCTCGGTTGTACGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGTAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029463.13 ENSMUST00000170847.2 |
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