Pregenerated sensors for HSD3B5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038092Ensembl transcript IDs: ENSMUST00000044094.6
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTCCTaGGGAAATTCTACCTACAAGAGGTTCCAGGCAATTCAGTACCAG | + |
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Preference number: 1 (lower is better) Translates to: KTRNALAHGREMWKS*GNSTYKRFQAIQYQ Trigger: CTGGTACTGAATTGCCTGGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR TCA 90 bp | AATGTTCCAAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTCCTTTGGGTCACAGCAGCTaGGTCACAACAGCCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: NVPRQEMLWHMEGRCGSPLGHSS*VTTACA Trigger: TGCACAGGCTGTTGTGACTCAGCTGCTGTGACCCAA...AGGACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTTGGAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGATGTGGAAGTCCTGAGGAAATTCTACCTACAAGAGGTTCCAGGCAATCTGATGGTGTGTGACTaGGCCAGTGACTTGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KGDVEVLRKFYLQEVPGNLMVCD*ASDLQG Trigger: ACCTTGCAAGTCACTGGCCCAGTCACACACCATCAG...ATTGCCTGGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR GCA 90 bp | CACATGGAAGGGAGATGTGGAAGTCCTGAGGAAATTCTACCTACAAGAGGTTCCAGTCACAACAGCCTGTaGATTACTGGGCAAGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: HMEGRCGSPEEILPTRGSSHNSL*ITGQVL Trigger: AAGCACTTGCCCAGTAATGCACAGGCTGTTGTGACT...GGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTTCCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGAGTCACAACAGCCTGTGCATTACTGGGCAAGTGCTTAGGACTGATGGTGACCCAAAGACAAGTTaGACAGTGCATAAAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: QLSHNSLCITGQVLRTDGDPKTS*TVHKME Trigger: TTCCATTTTATGCACTGTCCAACTTGTCTTTGGGTC...ACCATCAGTCCTAAGCACTTGCCCAGTAATGCACAGGCTGTTGTGACTCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGTTCCAAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTCCAGCCACAGATTCTTaGGTCACAGCAGCTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QNVPRQEMLWHMEGRCGSPATDS*VTAAES Trigger: TGACTCAGCTGCTGTGACCCAAGAATCTGTGGCTGG...ACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTTGGAACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR CAA 90 bp | AAGACAAGTTGGACAGTGCATAAAATGGAATTGATAAGAGTTGAGTaGTTTCTAAGTCCCTCTCTGGAGGACCTGATAACACCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: KTSWTVHKMELIRVE*FLSPSLEDLITPRA Trigger: GGCCCTGGGTGTTATCAGGTCCTCCAGAGAGGGACTTAGAAACAACTCAACTCTTATCAATTCCATTTTATGCACTGTCCAACTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCCAAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTCCTGGGAATTGATAAGAGTTaGGTTGTTTCTAAGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: MFQDKKCFGTWKGDVEVLGIDKS*VVSKSL Trigger: GAGGGACTTAGAAACAACTCAACTCTTATCAATTCC...CAGGACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTTGGAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR TCA 72 bp | AATGCTTTGGCACATGGAAGGGAGATGTGGAAGTCCTaGGGAAATTCTACCTACAAGAGGTTCCAGGCAATT | + |
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Preference number: 3 (lower is better) Translates to: NALAHGREMWKS*GNSTYKRFQAI Trigger: AATTGCCTGGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTTCCATGTGCCAAAGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR CCA 72 bp | GTGACTTGCAAGGTTGCTAGTGACCCAAAGACAAGTTaGACAGTGCATAAAATGGAATTGATAAGAGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: VTCKVASDPKTS*TVHKMELIRVE Trigger: CTCAACTCTTATCAATTCCATTTTATGCACTGTCCAACTTGTCTTTGGGTCACTAGCAACCTTGCAAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGAGCTTCATAAAGGTATCAAAATGTTCCAAGACAAGAAATGCTTTGGCACATTGATAAGAGTTGAGTaGTTTCTAAGTCCCTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: FELHKGIKMFQDKKCFGTLIRVE*FLSPSL Trigger: CAGAGAGGGACTTAGAAACAACTCAACTCTTATCAA...TGTGCCAAAGCATTTCTTGTCTTGGAACATTTTGATACCTTTATGAAGCTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCAATTCAGTACCAGCCACAGATTCTTGGGTCACAGCAGCTGAGTCACAAATAGCAGCAGCGGTGTaGATGACAGCAGACATGCCC | + |
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Preference number: 4 (lower is better) Translates to: PGNSVPATDSWVTAAESQIAAAV*MTADMP Trigger: GGGCATGTCTGCTGTCATCCACACCGCTGCTGCTAT...TTGTGACTCAGCTGCTGTGACCCAAGAATCTGTGGCTGGTACTGAATTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR TCA 90 bp | AGAGTTGAGTTGTTTCTAAGTCCCTCTCTGGAGGACCTGATAACACCCAGGGCCCTGAGCTGCTGTAGATaGATGTTGGCACACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RVELFLSPSLEDLITPRALSCCR*MLAHWL Trigger: AAGCCAGTGTGCCAACATTCATCTACAGCAGCTCAG...GGCCCTGGGTGTTATCAGGTCCTCCAGAGAGGGACTTAGAAACAACTCAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR GCA 90 bp | GAGTTGTTTCTAAGTCCCTCTCTGGAGGACCTGATAACACCCAGGGCCATGTCCATTTGTTGCCAGCACTaGCTTCTCAGCCATCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: ELFLSPSLEDLITPRAMSICCQH*LLSHPF Trigger: AAAAGGATGGCTGAGAAGGCAGTGCTGGCAACAAAT...GGACATGGCCCTGGGTGTTATCAGGTCCTCCAGAGAGGGACTTAGAAACAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | GAGTTGTTTCTAAGTCCCTCTCTGGAGGACCTGATAACACCCAGGGCCATGTCCACACTGGGTTGGCGATaGAGAATGTGGCATTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ELFLSPSLEDLITPRAMSTLGWR*RMWHFS Trigger: AGAAAAATGCCACATTCTCCATCGCCAACCCAGTGT...GGACATGGCCCTGGGTGTTATCAGGTCCTCCAGAGAGGGACTTAGAAACAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR GCA 90 bp | GAGTTGTTTCTAAGTCCCTCTCTGGAGGACCTGATAACACCCAGGGCCATGTCCCACAAGTATGCAAAGTaGCACCATTTTTCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: ELFLSPSLEDLITPRAMSHKYAK*HHFSGV Trigger: GACTCCTGAAAAATGGTGGCACTTTGCATACTTGTG...GGACATGGCCCTGGGTGTTATCAGGTCCTCCAGAGAGGGACTTAGAAACAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | AGAGTTGAGTTGTTTCTAAGTCCCTCTCTGGAGGACCTGATAACACCCAGGGCCCATCCTTTTGCTGTATaGGTATGGGTTAGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: RVELFLSPSLEDLITPRAHPFAV*VWVRPC Trigger: ACATGGCCTAACCCATACCCATACAGCAAAAGGATG...GGCCCTGGGTGTTATCAGGTCCTCCAGAGAGGGACTTAGAAACAACTCAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | CAAAATGTTCCAAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTTGCTTGGGGACTTCTTaGGGTCCTGTAGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QNVPRQEMLWHMEGRCGSCLGTS*GPVGSW Trigger: CCAGGAGCCTACAGGACCCCAAGAAGTCCCCAAGCA...ACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTTGGAACATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR GCA 90 bp | CACATGGAAGGGAGATGTGGAAGTCCTGAGGAAATTCTACCTACAAGAGGTTCCTGCAACTCTTCCTCCTaGACCAACATTCGGACAATC | + |
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Preference number: 4 (lower is better) Translates to: HMEGRCGSPEEILPTRGSCNSSS*TNIRTI Trigger: GATTGTCCGAATGTTGGTGCAGGAGGAAGAGTTGCA...GGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTTCCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | AAGGGAGATGTGGAAGTCCTGAGGAAATTCTACCTACAAGAGGTTCCAGGCAATCCACATACACTGGGTTaGCGATGGAGAATGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KGDVEVLRKFYLQEVPGNPHTLG*RWRMWH Trigger: ATGCCACATTCTCCATCGCCAACCCAGTGTATGTGG...ATTGCCTGGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | TTTGAGCTTCATAAAGGTATCAAAATGTTCCAAGACAAGAAATGCTTTGGCACAGGTCCTGTAGGCTCCTaGCAGCCAGAATGTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FELHKGIKMFQDKKCFGTGPVGS*QPECEP Trigger: GGGCTCACATTCTGGCTGCCAGGAGCCTACAGGACC...TGTGCCAAAGCATTTCTTGTCTTGGAACATTTTGATACCTTTATGAAGCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR GCA 90 bp | ACTTGCAAGGTTGCTAGTGACCCAAAGACAAGTTGGACAGTGCATAAAATGGAACATGTGCTTTCACGATaGTCTTCCTCATGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: TCKVASDPKTSWTVHKMEHVLSR*SSSWAF Trigger: GAATGCCCATGAGGAAGAGCATCGTGAAAGCACATG...TTCCATTTTATGCACTGTCCAACTTGTCTTTGGGTCACTAGCAACCTTGCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | CAAAATGTTCCAAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTGCTGTAGATGAATGTTaGCACACTGGCTTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: QNVPRQEMLWHMEGRCGSAVDEC*HTGFHT Trigger: TGTGTGGAAGCCAGTGTGCCAACATTCATCTACAGC...ACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTTGGAACATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | AATGTTCCAAGACAAGAAATGCTTTGGCACATGGAAGGGAGATGTGGAAGTCCTTTTGCTGTATGGGTATaGGTTAGGCCATGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NVPRQEMLWHMEGRCGSPFAVWV*VRPCAF Trigger: GAAAGCACATGGCCTAACCCATACCCATACAGCAAA...AGGACTTCCACATCTCCCTTCCATGTGCCAAAGCATTTCTTGTCTTGGAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CCA 90 bp | TTTGAGCTTCATAAAGGTATCAAAATGTTCCAAGACAAGAAATGCTTTGGCACATCAGTACTCTCACCTTaGCCTTTGTCTGCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FELHKGIKMFQDKKCFGTSVLSP*PLSAAW Trigger: CCAAGCTGCAGACAAAGGCCAAGGTGAGAGTACTGA...TGTGCCAAAGCATTTCTTGTCTTGGAACATTTTGATACCTTTATGAAGCTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CAA 90 bp | CCAGGCAATTCAGTACCAGCCACAGATTCTTGGGTCACAGCAGCTGAGTCACAAATGCTTGGGGACTTCTaGGGGTCCTGTAGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PGNSVPATDSWVTAAESQMLGDF*GSCRLL Trigger: CAGGAGCCTACAGGACCCCAAGAAGTCCCCAAGCAT...TTGTGACTCAGCTGCTGTGACCCAAGAATCTGTGGCTGGTACTGAATTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CAA 90 bp | CACATGGAAGGGAGATGTGGAAGTCCTGAGGAAATTCTACCTACAAGAGGTTCCGGAGTCTCCCATTTGTaGCCAGCACTGCCTTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: HMEGRCGSPEEILPTRGSGVSHL*PALPSQ Trigger: CTGAGAAGGCAGTGCTGGCAACAAATGGGAGACTCC...GGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTTCCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CAA 90 bp | CACATGGAAGGGAGATGTGGAAGTCCTGAGGAAATTCTACCTACAAGAGGTTCCTCAGGAGTCTCCCATTaGTTGCCAGCACTGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HMEGRCGSPEEILPTRGSSGVSH*LPALPS Trigger: AGAAGGCAGTGCTGGCAACAAATGGGAGACTCCTGA...GGAACCTCTTGTAGGTAGAATTTCCTCAGGACTTCCACATCTCCCTTCCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS TCA 90 bp | ATGAATGTTGGCACACTGGCTTCCACACAAGCATCCAGTAGGAGCTaGGTACCTTTCAGATTGACATCTAGGATGGTCTGTCTGGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: MNVGTLASTQASSRS*VPFRLTSRMVCLEA Trigger: CGCTTCCAGACAGACCATCCTAGATGTCAATCTGAAAGGTACTCAGCTCCTACTGGATGCTTGTGTGGAAGCCAGTGTGCCAACATTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS-3UTR CAA 90 bp | TCTTTGAGCTTCATAAAGGTATCAAAATGTTCCAAGACAAGAAATGCTTTGGCATTCAGTACTCTCACCTaGGCCTTTGTCTGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLSFIKVSKCSKTRNALAFSTLT*AFVCSL Trigger: CAAGCTGCAGACAAAGGCCAAGGTGAGAGTACTGAA...TGCCAAAGCATTTCTTGTCTTGGAACATTTTGATACCTTTATGAAGCTCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS TCA 72 bp | GGCACACTGGCTTCCACACAAGCATCCAGTAGGAGCTaGGTACCTTTCAGATTGACATCTAGGATGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GTLASTQASSRS*VPFRLTSRMVC Trigger: ACAGACCATCCTAGATGTCAATCTGAAAGGTACTCAGCTCCTACTGGATGCTTGTGTGGAAGCCAGTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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| CDS TCA 72 bp | TATGCTGTTGTTCTTCAGTGCTGTTTTCACAGTGGTTaGAGTGACTTGGCATTCTTCCCCATAGATGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: YAVVLQCCFHSG*SDLAFFPIDER Trigger: CCTTTCATCTATGGGGAAGAATGCCAAGTCACTTCAACCACTGTGAAAACAGCACTGAAGAACAACAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044094.6 |
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