Pregenerated sensors for HSD3B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062410Ensembl transcript IDs: ENSMUST00000090743.13, ENSMUST00000094050.11, ENSMUST00000107018.8, ENSMUST00000107019.8, ENSMUST00000146196.4
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCTTCATAAAGCTAGCAGAATTTTCGGAAGGCTATACATGCTTTaGATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAGGTACAAGTG | + |
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Preference number: 1 (lower is better) Translates to: ELHKASRIFGRLYML*MGRESNGESSEVQV Trigger: CACTTGTACCTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAGCTTTATGAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR GCA 90 bp | CCATTGAGCTTCATAAAGCTAGCAGAATTTTCGGAAGGCTATACATaGTTTGAATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PLSFIKLAEFSEGYT*FEWGEKVMERALRY Trigger: GTACCTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAGCTTTATGAAGCTCAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR CAA 90 bp | AGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTaGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: RGLGPGAGAQVAVCL*GGTSERRLVAGSVT Trigger: AGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR-3UTR CCA 90 bp | ACATGCTTTGAATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGGCTGTGTGTCTTTTaGGAGGTACTTCAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: TCFEWGEKVMERALRYKWWLCVF*EVLQKE Trigger: TTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCA...CCACTTGTACCTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR TCA 72 bp | AAAGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTaGGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: KVMERALRYKWC*GAWAQELGHRW Trigger: CCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTGCAACAGCACCTGTGTaGTGCTTTTATCCTTACTGT | + |
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Preference number: 3 (lower is better) Translates to: QVVLRGLGPGAGAQVAVCATAPV*CFYPYC Trigger: ACAGTAAGGATAAAAGCACAACACAGGTGCTGTTGC...ACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGGCAACAGCACCTGTGTaGTGCTTTTATCCTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GAGAQVAVCLLGGTSERRATAPV*CFYPYC Trigger: ACAGTAAGGATAAAAGCACAACACAGGTGCTGTTGC...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR CCA 72 bp | GCACCTGTGTTGTGCTTTTATCCTTACTGTCCTTACTaGACTGGTAATACCCAGGGCCATGTCTCCATCATC | + |
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Preference number: 3 (lower is better) Translates to: APVLCFYPYCPY*TGNTQGHVSII Trigger: GATGATGGAGACATGGCCCTGGGTATTACCAGTCCAGTAAGGACAGTAAGGATAAAAGCACAACACAGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR CCA 72 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTaGGTCAGTGACTGGCAAGGCTTTGGTGACTTGATT | + |
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Preference number: 3 (lower is better) Translates to: SFGRYFRKKACG*VSDWQGFGDLI Trigger: AATCAAGTCACCAAAGCCTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGCAACAGCACCTGTGTaGTGCTTTTATCCTTACTGT | + |
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Preference number: 3 (lower is better) Translates to: SFGRYFRKKACGWVSDWQATAPV*CFYPYC Trigger: ACAGTAAGGATAAAAGCACAACACAGGTGCTGTTGC...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR-3UTR CAA 90 bp | ACATGCTTTGAATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAGGTACAAGTGGGTGGCTGTGTGTCTTTaGGGAGGTACTTCAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: TCFEWGEKVMERALRYKWVAVCL*GGTSER Trigger: TCTTTCTGAAGTACCTCCCAAAAGACACACAGCCAC...CCACTTGTACCTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR CCA 72 bp | TACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTaGCAAGGCTTTGGTGACTTGATTAAGGCACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: YFRKKACGWVSD*QGFGDLIKALN Trigger: ATTTAGTGCCTTAATCAAGTCACCAAAGCCTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR TCA 72 bp | AAAGCTAGCAGAATTTTCGGAAGGCTATACATGCTTTaGATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: KASRIFGRLYML*MGRESNGESSE Trigger: CTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | CAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCCCTGGTTTCAGGTTTaGAGACCTTGTCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: QVVLRGLGPGAGAQVAVCPWFQV*RPCPGP Trigger: GGGTCCTGGACAAGGTCTTCAAACCTGAAACCAGGG...ACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | CAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCCCTGCAACGTCAACTaGGCTGGAGAAGATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: QVVLRGLGPGAGAQVAVCPCNVN*AGEDEG Trigger: GCCTTCATCTTCTCCAGCTCAGTTGACGTTGCAGGG...ACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | ACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGGCACCAACAACTGGATaGTCCTCTGGCCCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: TSGAEGLGPRSWGTGGCVAPTTG*SSGPKT Trigger: GGTTTTTGGGCCAGAGGATCATCCAGTTGTTGGTGC...CACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTATACTGGGTTGGCTGTaGAGAATTTGCCCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: QVVLRGLGPGAGAQVAVCILGWL*RICPHL Trigger: GAGGTGGGGGCAAATTCTCCACAGCCAACCCAGTAT...ACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | GTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGATACTGGGTTGGCTGTaGAGAATTTGCCCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: VQVVLRGLGPGAGAQVAVILGWL*RICPHL Trigger: GAGGTGGGGGCAAATTCTCCACAGCCAACCCAGTAT...CACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGGGTTTCGAAGGCCCCTaGCAGCCAGAATGTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: WAQELGHRWLCVFWEVLQGFEGP*QPECVP Trigger: GGGCACACATTCTGGCTGCCAGGGGCCTTCGAAACC...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| 3UTR CAA 72 bp | GGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTaGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPGAGAQVAVCL*GGTSERRLVAG Trigger: CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGGCACCAACAACTGGATaGTCCTCTGGCCCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: WAQELGHRWLCVFWEVLQAPTTG*SSGPKT Trigger: GGTTTTTGGGCCAGAGGATCATCCAGTTGTTGGTGC...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR GCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCCCAAAAACCCTCCTaGTCCAGTCACCAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGAQKPS*SSHQAA Trigger: AGCTGCCTGGTGACTGGAGCAGGAGGGTTTTTGGGC...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR GCA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGCCCAAAAACCCTCCTaGTCCAGTCACCAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AQELGHRWLCVFWEVLQKAQKPS*SSHQAA Trigger: AGCTGCCTGGTGACTGGAGCAGGAGGGTTTTTGGGC...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGACTGAGCTGGAGAAGATaGAGGCTGGCACACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGLSWRR*RLAHWL Trigger: AAGCCAGTGTGCCAGCCTTCATCTTCTCCAGCTCAG...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAACTGAGCTGGAGAAGATaGAGGCTGGCACACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AQELGHRWLCVFWEVLQKLSWRR*RLAHWL Trigger: AAGCCAGTGTGCCAGCCTTCATCTTCTCCAGCTCAG...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAACCCTGCAACGTCAACTaGGCTGGAGAAGATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: AQELGHRWLCVFWEVLQKPCNVN*AGEDEG Trigger: GCCTTCATCTTCTCCAGCTCAGTTGACGTTGCAGGG...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | ACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGATTGCCCACATATACTaGGTTGGCTGTGGAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: TSGAEGLGPRSWGTGGCVIAHIY*VGCGEF Trigger: AAATTCTCCACAGCCAACCCAGTATATGTGGGCAAT...CACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | GTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGATTGCCCACATATACTaGGTTGGCTGTGGAGAATTT | + |
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Preference number: 4 (lower is better) Translates to: VQVVLRGLGPGAGAQVAVIAHIY*VGCGEF Trigger: AAATTCTCCACAGCCAACCCAGTATATGTGGGCAAT...CACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTGGCAGCAGTATGGATaGCAACAGAGATGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ELGHRWLCVFWEVLQKEGWQQYG*QQRCPG Trigger: GCCAGGGCATCTCTGTTGTCATCCATACTGCTGCCA...GCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCCTGAGCTGGAGAAGATaGAGGCTGGCACACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ELGHRWLCVFWEVLQKEGLSWRR*RLAHWL Trigger: AAGCCAGTGTGCCAGCCTTCATCTTCTCCAGCTCAG...GCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | CACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTTTCGAAGGCCCCTaGCAGCCAGAATGTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: HRWLCVFWEVLQKEGLWLGFEGP*QPECVP Trigger: GGGCACACATTCTGGCTGCCAGGGGCCTTCGAAACC...CAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | CTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGGGTTTCGAAGGCCCCTaGCAGCCAGAATGTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLGGTSERRLVAGSVTGKGFEGP*QPECVP Trigger: GGGCACACATTCTGGCTGCCAGGGGCCTTCGAAACC...CTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGACAAGCCAGTACAGTATaGGCACAGGAAGGTACCACC | + |
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Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGQASTV*AQEGTT Trigger: GGTGGTACCTTCCTGTGCCCATACTGTACTGGCTTG...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAACAAGCCAGTACAGTATaGGCACAGGAAGGTACCACC | + |
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Preference number: 4 (lower is better) Translates to: AQELGHRWLCVFWEVLQKQASTV*AQEGTT Trigger: GGTGGTACCTTCCTGTGCCCATACTGTACTGGCTTG...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTTATATATCTGTAGATTaGACTCAGCAGGAAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QVVLRGLGPGAGAQVAVCYISVD*TQQEAH Trigger: GTGAGCTTCCTGCTGAGTCCAATCTACAGATATATA...ACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGGCACCAACAACTGGATaGTCCTCTGGCCCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: GAGAQVAVCLLGGTSERRAPTTG*SSGPKT Trigger: GGTTTTTGGGCCAGAGGATCATCCAGTTGTTGGTGC...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR TCA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGCCCTGCAACGTCAACTaGGCTGGAGAAGATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: QVAVCLLGGTSERRLVAGPCNVN*AGEDEG Trigger: GCCTTCATCTTCTCCAGCTCAGTTGACGTTGCAGGG...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR GCA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGCCTAGGTTGAAGAATTaGTCCCTGGTTTCAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: WAQELGHRWLCVFWEVLQPRLKN*SLVSGL Trigger: CAAACCTGAAACCAGGGAGCAATTCTTCAACCTAGG...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
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| CDS-3UTR GCA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGTTCTCTCCCCATAAATaGACATGGGCCTTAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: WAQELGHRWLCVFWEVLQFSPHK*TWALMH Trigger: GTGCATTAAGGCCCATGTGCATTTATGGGGAGAGAA...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGATACTGGGTTGGCTGTaGAGAATTTGCCCCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: GAGAQVAVCLLGGTSERRILGWL*RICPHL Trigger: GAGGTGGGGGCAAATTCTCCACAGCCAACCCAGTAT...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAACCACATATACTGGGTTaGCTGTGGAGAATTTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQELGHRWLCVFWEVLQKPHILG*LWRICP Trigger: GGGGCAAATTCTCCACAGCCAACCCAGTATATGTGG...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGGCACCAACAACTGGATaGTCCTCTGGCCCAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QVAVCLLGGTSERRLVAGAPTTG*SSGPKT Trigger: GGTTTTTGGGCCAGAGGATCATCCAGTTGTTGGTGC...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTCTGAGCTGGAGAAGATaGAGGCTGGCACACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WGTGGCVSFGRYFRKKACLSWRR*RLAHWL Trigger: AAGCCAGTGTGCCAGCCTTCATCTTCTCCAGCTCAG...ACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGCCCAAAAACCCTCCTaGTCCAGTCACCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGRYFRKKACGWVSDWQAQKPS*SSHQAA Trigger: AGCTGCCTGGTGACTGGAGCAGGAGGGTTTTTGGGC...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCCACCATTTTTCAGCATaGTCCCATTGGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELGHRWLCVFWEVLQKEGHHFSA*SHWLPA Trigger: TGCTGGCAGCCAATGGGAGCATGCTGAAAAATGGTG...GCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCACCATTTTTCAGCATaGTCCCATTGGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQVAVCLLGGTSERRHHFSA*SHWLPA Trigger: TGCTGGCAGCCAATGGGAGCATGCTGAAAAATGGTG...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGCAAGCCAGTACAGTATaGGCACAGGAAGGTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: QVAVCLLGGTSERRLVAGQASTV*AQEGTT Trigger: GGTGGTACCTTCCTGTGCCCATACTGTACTGGCTTG...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAATGGCAGCAGTATGGATaGCAACAGAGATGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGRYFRKKACGWVSDWQWQQYG*QQRCPG Trigger: GCCAGGGCATCTCTGTTGTCATCCATACTGCTGCCA...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGATCCTTGGATATTTGGTaGCTTCTTGGGGTTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGSLDIW*LLGVSK Trigger: CTTCGAAACCCCAAGAAGTCACCAAATATCCAAGGA...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGATCTCAGCCATCTTTTTaGTGTATGGGTATGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGSQPSF*CMGMGQ Trigger: CTGACCCATACCCATACAGCAAAAAGATGGCTGAGA...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAATTCTCTCCCCATAAATaGACATGGGCCTTAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQELGHRWLCVFWEVLQKFSPHK*TWALMH Trigger: GTGCATTAAGGCCCATGTGCATTTATGGGGAGAGAA...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGATACTGGGTTGGCTGTaGAGAATTTGCCCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGGTSERRLVAGSVTGKILGWL*RICPHL Trigger: GAGGTGGGGGCAAATTCTCCACAGCCAACCCAGTAT...CTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTCAAGCCAGTACAGTATaGGCACAGGAAGGTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: WGTGGCVSFGRYFRKKACQASTV*AQEGTT Trigger: GGTGGTACCTTCCTGTGCCCATACTGTACTGGCTTG...ACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGTATATATCTGTAGATTaGACTCAGCAGGAAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAQELGHRWLCVFWEVLQYISVD*TQQEAH Trigger: GTGAGCTTCCTGCTGAGTCCAATCTACAGATATATA...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGATCAAGATCTTTCTCCTaGACCAACAACTGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGSRSFS*TNNWMI Trigger: GATCATCCAGTTGTTGGTGCAGGAGAAAGATCTTGA...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGTCTCAGCCATCTTTTTaGTGTATGGGTATGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQVAVCLLGGTSERRSQPSF*CMGMGQ Trigger: CTGACCCATACCCATACAGCAAAAAGATGGCTGAGA...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGCACCATTTTTCAGCATaGTCCCATTGGCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGGTSERRLVAGSVTGKHHFSA*SHWLPA Trigger: TGCTGGCAGCCAATGGGAGCATGCTGAAAAATGGTG...CTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGACACAAGTTTGCAAAGTaGCACCATTTTTCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGHKFAK*HHFSAC Trigger: GCATGCTGAAAAATGGTGGCACTTTGCAAACTTGTG...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGTTCTCTCCCCATAAATaGACATGGGCCTTAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQVAVCLLGGTSERRFSPHK*TWALMH Trigger: GTGCATTAAGGCCCATGTGCATTTATGGGGAGAGAA...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAATTGCCCACATATACTaGGTTGGCTGTGGAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SNGESSEVQVVLRGLGPGIAHIY*VGCGEF Trigger: AAATTCTCCACAGCCAACCCAGTATATGTGGGCAAT...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | ACATGCTTTGAATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAGGTACAAGTGGCCCTGCAACGTCAACTaGGCTGGAGAAGATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCFEWGEKVMERALRYKWPCNVN*AGEDEG Trigger: GCCTTCATCTTCTCCAGCTCAGTTGACGTTGCAGGG...CCACTTGTACCTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCCTTGGATATTTGGTaGCTTCTTGGGGTTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVAVCLLGGTSERRLVAGSLDIW*LLGVSK Trigger: CTTCGAAACCCCAAGAAGTCACCAAATATCCAAGGA...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTCAAGATCTTTCTCCTaGACCAACAACTGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELGHRWLCVFWEVLQKEGSRSFS*TNNWMI Trigger: GATCATCCAGTTGTTGGTGCAGGAGAAAGATCTTGA...GCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCTCAGCCATCTTTTTaGTGTATGGGTATGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVAVCLLGGTSERRLVAGSQPSF*CMGMGQ Trigger: CTGACCCATACCCATACAGCAAAAAGATGGCTGAGA...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTGGGTACTGAAGAATTaGTCCCTGGTTTCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVAVCLLGGTSERRLVAGWVLKN*SLVSGL Trigger: CAAACCTGAAACCAGGGAGCAATTCTTCAGTACCCA...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094050.11 ENSMUST00000107018.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGCCTAGGTTGAAGAATTaGTCCCTGGTTTCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGGTSERRLVAGSVTGKPRLKN*SLVSGL Trigger: CAAACCTGAAACCAGGGAGCAATTCTTCAACCTAGG...CTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGTTCTCTCCCCATAAATaGACATGGGCCTTAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRWLCVFWEVLQKEGLWLFSPHK*TWALMH Trigger: GTGCATTAAGGCCCATGTGCATTTATGGGGAGAGAA...CAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAGAATTTTCGGAAGGCTATACATGCTTTGAATGGGGAGAGAAAGTAATGGGTTTCGAAGGCCCCTaGCAGCCAGAATGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAEFSEGYTCFEWGEKVMGFEGP*QPECVP Trigger: GGGCACACATTCTGGCTGCCAGGGGCCTTCGAAACC...CATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTATATATCTGTAGATTaGACTCAGCAGGAAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELGHRWLCVFWEVLQKEGYISVD*TQQEAH Trigger: GTGAGCTTCCTGCTGAGTCCAATCTACAGATATATA...GCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAATCTCAGCCATCTTTTTaGTGTATGGGTATGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFGRYFRKKACGWVSDWQSQPSF*CMGMGQ Trigger: CTGACCCATACCCATACAGCAAAAAGATGGCTGAGA...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAACACAAGTTTGCAAAGTaGCACCATTTTTCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGRYFRKKACGWVSDWQHKFAK*HHFSAC Trigger: GCATGCTGAAAAATGGTGGCACTTTGCAAACTTGTG...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTTATATATCTGTAGATTaGACTCAGCAGGAAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WGTGGCVSFGRYFRKKACYISVD*TQQEAH Trigger: GTGAGCTTCCTGCTGAGTCCAATCTACAGATATATA...ACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| 3UTR CAA 72 bp | TGGCCTCTGTGTCAAAAGAAGGCAACAGCACCTGTGTaGTGCTTTTATCCTTACTGTCCTTACTGGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPLCQKKATAPV*CFYPYCPYWTG Trigger: ACCAGTCCAGTAAGGACAGTAAGGATAAAAGCACAACACAGGTGCTGTTGCCTTCTTTTGACACAGAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CCA 90 bp | ACATGCTTTGAATGGGGAGAGAAAGTAATGGAGAGAGCTCTGAGGTACAAGTGGATTGCCCACATATACTaGGTTGGCTGTGGAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TCFEWGEKVMERALRYKWIAHIY*VGCGEF Trigger: AAATTCTCCACAGCCAACCCAGTATATGTGGGCAAT...CCACTTGTACCTCAGAGCTCTCTCCATTACTTTCTCTCCCCATTCAAAGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGAATTTTCGGAAGGCTATACATGCTTTGAATGGGGAGAGAAAGTAATGTCCTTGGATATTTGGTaGCTTCTTGGGGTTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAEFSEGYTCFEWGEKVMSLDIW*LLGVSK Trigger: CTTCGAAACCCCAAGAAGTCACCAAATATCCAAGGA...CATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCAGAATTTTCGGAAGGCTATACATGCTTTGAATGGGGAGAGAAAGTAATGCACAAGTTTGCAAAGTaGCACCATTTTTCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LAEFSEGYTCFEWGEKVMHKFAK*HHFSAC Trigger: GCATGCTGAAAAATGGTGGCACTTTGCAAACTTGTG...CATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCCCTGGTTTCAGGTTaGAAGACCTTGTCCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TSGAEGLGPRSWGTGGCVSLVSG*KTLSRT Trigger: GGTCCTGGACAAGGTCTTCAAACCTGAAACCAGGGA...CACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGATATTTGGTGACTTCTaGGGGTTTCGAAGGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSGAEGLGPRSWGTGGCVIFGDF*GFRRPL Trigger: CAGGGGCCTTCGAAACCCCAAGAAGTCACCAAATAT...CACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CAA 90 bp | GTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGATATTTGGTGACTTCTaGGGGTTTCGAAGGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQVVLRGLGPGAGAQVAVIFGDF*GFRRPL Trigger: CAGGGGCCTTCGAAACCCCAAGAAGTCACCAAATAT...CACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTTTCTCAGCCATCTTTTaGCTGTATGGGTATGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QVVLRGLGPGAGAQVAVCFSAIF*LYGYGS Trigger: TGACCCATACCCATACAGCAAAAAGATGGCTGAGAA...ACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | GCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAAGGTACCACCTGGAATaGAGGCAGAAGCCCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: AQELGHRWLCVFWEVLQKRYHLE*RQKPHS Trigger: GGAGTGGGGCTTCTGCCTCAATTCCAGGTGGTACCT...TTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGATATTTGGTGACTTCTaGGGGTTTCGAAGGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: WAQELGHRWLCVFWEVLQIFGDF*GFRRPL Trigger: CAGGGGCCTTCGAAACCCCAAGAAGTCACCAAATAT...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGAGGTACCACCTGGAATaGAGGCAGAAGCCCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: GAGAQVAVCLLGGTSERRRYHLE*RQKPHS Trigger: GGAGTGGGGCTTCTGCCTCAATTCCAGGTGGTACCT...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | ACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGGTATATATCTGTAGATaGGACTCAGCAGGAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: TSGAEGLGPRSWGTGGCVVYICR*DSAGSS Trigger: TGAGCTTCCTGCTGAGTCCAATCTACAGATATATAC...CACACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | TGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGTTCTCAGCCATCTTTTaGCTGTATGGGTATGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: WAQELGHRWLCVFWEVLQFSAIF*LYGYGS Trigger: TGACCCATACCCATACAGCAAAAAGATGGCTGAGAA...CTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCCTGGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | GTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGCTGGGGCACAGGTGGCTGTGTGTGTTAGAAAGGAATaGACTTCTCTCCCCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: VQVVLRGLGPGAGAQVAVCVRKE*TSLPIN Trigger: ATTTATGGGGAGAGAAGTCAATTCCTTTCTAACACA...CACAGCCACCTGTGCCCCAGCTCCTGGGCCCAAGCCCCTCAGCACCACTTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | TGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTAGGTACCACCTGGAATaGAGGCAGAAGCCCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: WGTGGCVSFGRYFRKKACRYHLE*RQKPHS Trigger: GGAGTGGGGCTTCTGCCTCAATTCCAGGTGGTACCT...ACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | GAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTCCAACACTGTCACCTaGATGCTTGTCCCTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ELGHRWLCVFWEVLQKEGSNTVT*MLVPRL Trigger: CAACCTAGGGACAAGCATCAAGGTGACAGTGTTGGA...GCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGACTGGGTACTGAAGAATaGCTCCCTGGTTTCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SNGESSEVQVVLRGLGPGLGTEE*LPGFRF Trigger: AAACCTGAAACCAGGGAGCAATTCTTCAGTACCCAG...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094050.11 ENSMUST00000107018.8 |
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| CDS-3UTR CAA 90 bp | CTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGTCCCTGGTTTCAGGTTaGAAGACCTTGTCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: LLGGTSERRLVAGSVTGKSLVSG*KTLSRT Trigger: GGTCCTGGACAAGGTCTTCAAACCTGAAACCAGGGA...CTTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGATGCTTGTCCCTAGGTaGAAGAATTGCTCCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GAGAQVAVCLLGGTSERRMLVPR*KNCSLV Trigger: AACCAGGGAGCAATTCTTCAACCTAGGGACAAGCAT...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCCAACACTGTCACCTaGATGCTTGTCCCTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QVAVCLLGGTSERRLVAGSNTVT*MLVPRL Trigger: CAACCTAGGGACAAGCATCAAGGTGACAGTGTTGGA...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGATATTTGGTGACTTCTaGGGGTTTCGAAGGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QVAVCLLGGTSERRLVAGIFGDF*GFRRPL Trigger: CAGGGGCCTTCGAAACCCCAAGAAGTCACCAAATAT...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAATCCCTGGTTTCAGGTTaGAAGACCTTGTCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: SFGRYFRKKACGWVSDWQSLVSG*KTLSRT Trigger: GGTCCTGGACAAGGTCTTCAAACCTGAAACCAGGGA...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGATGCTTGTCCCTAGGTaGAAGAATTGCTCCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: QVAVCLLGGTSERRLVAGMLVPR*KNCSLV Trigger: AACCAGGGAGCAATTCTTCAACCTAGGGACAAGCAT...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGAGTATATATCTGTAGATaGGACTCAGCAGGAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SNGESSEVQVVLRGLGPGVYICR*DSAGSS Trigger: TGAGCTTCCTGCTGAGTCCAATCTACAGATATATAC...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS GCA 90 bp | CCTTCCAACACTGTCACCTTGATGCTTGTCCCTAGGTTGAAGAATTaGTCCCTGGTTTCAGGTTTGAAGACCTTGTCCAGGACCCTGATC | + |
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Preference number: 5 (lower is better) Translates to: PSNTVTLMLVPRLKN*SLVSGLKTLSRTLI Trigger: GATCAGGGTCCTGGACAAGGTCTTCAAACCTGAAACCAGGGAGCAATTCTTCAACCTAGGGACAAGCATCAAGGTGACAGTGTTGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 ENSMUST00000146196.4 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGGTATATATCTGTAGATaGGACTCAGCAGGAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GAGAQVAVCLLGGTSERRVYICR*DSAGSS Trigger: TGAGCTTCCTGCTGAGTCCAATCTACAGATATATAC...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | AGTAATGGAGAGAGCTCTGAGGTACAAGTGGTGCTGAGGGGCTTGGGCCCAGGATGTGTTAGAAAGGAATaGACTTCTCTCCCCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: SNGESSEVQVVLRGLGPGCVRKE*TSLPIN Trigger: ATTTATGGGGAGAGAAGTCAATTCCTTTCTAACACA...TCCTGGGCCCAAGCCCCTCAGCACCACTTGTACCTCAGAGCTCTCTCCATTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAATTCTCAGCCATCTTTTaGCTGTATGGGTATGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SFGRYFRKKACGWVSDWQFSAIF*LYGYGS Trigger: TGACCCATACCCATACAGCAAAAAGATGGCTGAGAA...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGGGCACAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGTGTGTTAGAAAGGAATaGACTTCTCTCCCCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: GAGAQVAVCLLGGTSERRCVRKE*TSLPIN Trigger: ATTTATGGGGAGAGAAGTCAATTCCTTTCTAACACA...CCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTGTGCCCCAGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAGAATTTTCGGAAGGCTATACATGCTTTGAATGGGGAGAGAAAGTAATGAGGTACCACCTGGAATaGAGGCAGAAGCCCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LAEFSEGYTCFEWGEKVMRYHLE*RQKPHS Trigger: GGAGTGGGGCTTCTGCCTCAATTCCAGGTGGTACCT...CATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGGCTGTGTGTCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTGTGTTAGAAAGGAATaGACTTCTCTCCCCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: QVAVCLLGGTSERRLVAGCVRKE*TSLPIN Trigger: ATTTATGGGGAGAGAAGTCAATTCCTTTCTAACACA...CCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGACACACAGCCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | TCTTTTGGGAGGTACTTCAGAAAGAAGGCTTGTGGCTGGGTCAGTGACTGGCAAGTATATATCTGTAGATaGGACTCAGCAGGAAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SFGRYFRKKACGWVSDWQVYICR*DSAGSS Trigger: TGAGCTTCCTGCTGAGTCCAATCTACAGATATATAC...TTGCCAGTCACTGACCCAGCCACAAGCCTTCTTTCTGAAGTACCTCCCAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAGAATTTTCGGAAGGCTATACATGCTTTGAATGGGGAGAGAAAGTAATGCTGGGTACTGAAGAATaGCTCCCTGGTTTCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LAEFSEGYTCFEWGEKVMLGTEE*LPGFRF Trigger: AAACCTGAAACCAGGGAGCAATTCTTCAGTACCCAG...CATTACTTTCTCTCCCCATTCAAAGCATGTATAGCCTTCCGAAAATTCTGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094050.11 ENSMUST00000107018.8 |
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| CDS CAA 72 bp | CCTTCCAACACTGTCACCTTGATGCTTGTCCCTAGGTaGAAGAATTGCTCCCTGGTTTCAGGTTTGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: PSNTVTLMLVPR*KNCSLVSGLKT Trigger: GGTCTTCAAACCTGAAACCAGGGAGCAATTCTTCAACCTAGGGACAAGCATCAAGGTGACAGTGTTGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090743.13 ENSMUST00000107019.8 ENSMUST00000146196.4 |
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| CDS GCA 72 bp | AAATGCACATGGGCCTTAATGCACAAGTTTGCAAAGTaGCACCATTTTTCAGCATGCTCCCATTGGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KCTWALMHKFAK*HHFSACSHWLP Trigger: TGGCAGCCAATGGGAGCATGCTGAAAAATGGTGGCACTTTGCAAACTTGTGCATTAAGGCCCATGTGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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| CDS GCA 72 bp | ATACAGGCCTCCAATAAGTTCTGGGTACTGAAGAATTaGTCCCTGGTTTCAGGTTTGAAGACCTTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IQASNKFWVLKN*SLVSGLKTLSR Trigger: CCTGGACAAGGTCTTCAAACCTGAAACCAGGGAGCAATTCTTCAGTACCCAGAACTTATTGGAGGCCTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094050.11 ENSMUST00000107018.8 |
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| CDS CAA 72 bp | ACATTGCCCACATATACTGGGTTGGCTGTGGAGAATTaGCCCCCACCTCTCAGAATAAACTTATTTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLPTYTGLAVEN*PPPLRINLFLR Trigger: CCTCAAAAATAAGTTTATTCTGAGAGGTGGGGGCAAATTCTCCACAGCCAACCCAGTATATGTGGGCAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000090743.13 ENSMUST00000094050.11 ENSMUST00000107018.8 ENSMUST00000107019.8 |
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