Pregenerated sensors for HSD3B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063730Ensembl transcript IDs: ENSMUST00000107021.8, ENSMUST00000107022.8, ENSMUST00000177651.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGGAGAGAAATTAATGGAAAGAGCTCTGAGGTATGAGAGGTGCTaGGGGGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: CGEKLMERALRYERC*GAWTQKLGHRCPCV Trigger: GACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCCCCTCAGCACCTCTCATACCTCAGAGCTCTTTCCATTAATTTCTCTCCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR CCA 90 bp | ATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATCCCTaGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: MQWCQRLEADYGVDP*IWQSLDGPSFCLSS Trigger: GGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR TCA 90 bp | CTGGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTaGTGGCCGGCTAGGCCATCTTTTGATACATATGCAGCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LGHIQFACPMGISFQ*WPARPSFDTYAARV Trigger: GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 90 bp | GTCAGTGACTGGCAAGGCTTTGGTGACTTGATTAAGGCACTAAATTaGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTCTTGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: VSDWQGFGDLIKALN*PLCQKKAAAPVLCV Trigger: GACACACAAGACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAAGTCACCAAAGCCTTGCCAGTCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR CCA 90 bp | TGGTGTCAGCGTTTGGAAGCTGATTATGGGGTGGATCCCTGGATATaGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQRLEADYGVDPWI*QSLDGPSFCLSSKL Trigger: AAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 90 bp | ATTTTAGATGGCACCCCTTCATGGACTGAGCAAGGATGTGAAATCTaGAAGAAATTCTGTAATATTCCTTCTGTCATGATGCCTAGTACA | + |
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Preference number: 1 (lower is better) Translates to: ILDGTPSWTEQGCEI*KKFCNIPSVMMPST Trigger: TGTACTAGGCATCATGACAGAAGGAATATTACAGAATTTCTTCCAGATTTCACATCCTTGCTCAGTCCATGAAGGGGTGCCATCTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR GCA 90 bp | TTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATaGGGAGAGAAATTAATGGAAAGAGCTCTGAGGTATGAGAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: FIKQAEFSEGYTCFE*GEKLMERALRYERC Trigger: GCACCTCTCATACCTCAGAGCTCTTTCCATTAATTTCTCTCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR CCA 90 bp | TTCTTAGCTTCTCTCCACCTTTCTCATACCAGTGCTACAATTTTATaGAAAGCTGAAACAAAAATTCTCAAGCAGACATATGCAGATTTA | + |
|
Preference number: 1 (lower is better) Translates to: FLASLHLSHTSATIL*KAETKILKQTYADL Trigger: TAAATCTGCATATGTCTGCTTGAGAATTTTTGTTTCAGCTTTCCATAAAATTGTAGCACTGGTATGAGAAAGGTGGAGAGAAGCTAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTGATGGCCGGCAAGAGCTCTGAGGTATaGGAGGTGCTGAGGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GAYTVCMSNGHLFPVMAGKSSEV*EVLRGL Trigger: CAAGCCCCTCAGCACCTCTCATACCTCAGAGCTCTT...GCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTGATGGCCGGCAATGGTGTCAGCGTTTaGAAGCTGATTATGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GAYTVCMSNGHLFPVMAGNGVSV*KLIMGW Trigger: CCACCCCATAATCAGCTTCCAAACGCTGACACCATT...GCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CAA 90 bp | TCTGTGTCAAAAGAAGGCAGCAGCACCTGTCTTGTGTGTCTCTACTaGCTGAAGGACTTGATTACACCCAGGGCCATGTCTCACCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SVSKEGSSTCLVCLY*LKDLITPRAMSHPL Trigger: AAGAGGGTGAGACATGGCCCTGGGTGTAATCAAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCTGCCTTCTTTTGACACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGGGCTGGGTCAGTGACTaGCAAGGCTTTGGTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: EYILCEFLCECVTSLRMMGWVSD*QGFGDL Trigger: CAAGTCACCAAAGCCTTGCCAGTCACTGACCCAGCC...CATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTACTGGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTGATATGGCAGTCTCTAGATaGTCCATCCTTTTGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LYWGIYSLHVQWASLSSDMAVSR*SILLSQ Trigger: CTGAGACAAAAGGATGGACCATCTAGAGACTGCCAT...ATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCCAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGAGAGAAATTAATGAGGTATGAGAGGTGCTaGGGGGCTTGGACCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QAEFSEGYTCFECGEKLMRYERC*GAWTQK Trigger: CTTCTGGGTCCAAGCCCCTCAGCACCTCTCATACCT...CATTAATTTCTCTCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATTCCACAGATGAGGTATTaGCAAATAATTGTTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: EFLCECVTSLRMMPSRSIPQMRY*QIIVSS Trigger: GGAAGAAACAATTATTTGTCAATACCTCATCTGTGG...AATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTGGATATATGCCAAAGACCTTTCTCATACCAGTaGTACAATTTTATGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: WSMCPSYRLGHLLDICQRPFSYQ*YNFMES Trigger: GCTTTCCATAAAATTGTAGCACTGGTATGAGAAAGG...TCTTTGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CCA 90 bp | CCCGAAGGACAATACATTGGAATTAGTCTCACATCTGCATCTGTTTCTGATTTTATGCCCGTGTGTCTTTaGAGAGGAATTTCAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: PEGQYIGISLTSASVSDFMPVCL*RGISEK Trigger: TTTTTCTGAAATTCCTCTCCAAAGACACACGGGCAT...AAAATCAGAAACAGATGCAGATGTGAGACTAATTCCAATGTATTGTCCTTCGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | GGTATGAGAGGTGCTGAGGGGCTTGGACCCAGAAGCTaGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: GMRGAEGLGPRS*GTDARVSLERN Trigger: ATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCCCCTCAGCACCTCTCATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR GCA 72 bp | GCCCTGGCATTCCCCTGTACTGGGGCATATACAGTTTaGATGTCCAATGGGCATCTCTTTCCAGTGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: ALAFPCTGAYTV*MSNGHLFPVMA Trigger: GGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCCAGTACAGGGGAATGCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | CCCCTGTACTGGGGCATATACAGTTTGCATGTCCAATaGGCATCTCTTTCCAGTGATGGCCGGCTAGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PLYWGIYSLHVQ*ASLSSDGRLGH Trigger: ATGGCCTAGCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCCAGTACAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | GTTCCACCTATATGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIWLQIPLAP*VLSLAPPLGAL Trigger: CAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCATATAGGTGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATTTACTTGCTGAAGGACTaGATTACACCCAGGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: EFLCECVTSLRMMPSRSIYLLKD*ITPRAM Trigger: CATGGCCCTGGGTGTAATCAAGTCCTTCAGCAAGTA...AATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | TGGCAAGGCTTTGGTGACTTGATTAAGGCACTAAATTaGCCTCTGTGTCAAAAGAAGGCAGCAGCACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: WQGFGDLIKALN*PLCQKKAAAPV Trigger: GACAGGTGCTGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAAGTCACCAAAGCCTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | GGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTaGATATATGCCAAAGAGACGAATTGCTGGATCCTC | + |
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Preference number: 3 (lower is better) Translates to: GACVLLTGWDIF*IYAKETNCWIL Trigger: GAGGATCCAGCAATTCGTCTCTTTGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTACTGGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTGATCGGCTAGGCCATCTTTaGATACATATGCAGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: LYWGIYSLHVQWASLSSDRLGHL*IHMQLE Trigger: CTCTAGCTGCATATGTATCAAAAGATGGCCTAGCCG...ATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCCAGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | TTATGGGGTGGATCCCTGGATATGGCAGTCTCTAGATaGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LWGGSLDMAVSR*SILLSQLQTLS Trigger: AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCACCCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR TCA 72 bp | TTGCTGGATCCTCCAGTAGAACTATGTCCAATTTTCTaGGGAACCGCCAGACTGATTTCCAGAGTGGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: LLDPPVELCPIF*GTARLISRVVV Trigger: TACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTTCTACTGGAGGATCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR TCA 72 bp | GTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATaGTGCCCTCCAGGTCCATTCATTTGGCTAGGAATT | + |
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Preference number: 3 (lower is better) Translates to: VSSFVNVLPHSG*CPPGPFIWLGI Trigger: AATTCCTAGCCAAATGAATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR TCA 72 bp | ATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTaGTGGCCGGCTAGGCCATCTTTTGATACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: IQFACPMGISFQ*WPARPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAGCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR GCA 72 bp | TGTCCTTCTTACCGGTTGGGACATCTTCTGGATATATaGCAAAGAGACGAATTGCTGGATCCTCCAGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: CPSYRLGHLLDI*QRDELLDPPVE Trigger: TTCTACTGGAGGATCCAGCAATTCGTCTCTTTGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGATACTTGCTGAAGGACTaGATTACACCCAGGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: GFIKQAEFSEGYTCFECGYLLKD*ITPRAM Trigger: CATGGCCCTGGGTGTAATCAAGTCCTTCAGCAAGTA...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTTGTACAAGATGCTCAGGCTATTCTTAAACCACAAGTTCTGAGAGGCAAGCTCTACTGTCTAGGCTaGTCAAATTTTGGTCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: VVVQDAQAILKPQVLRGKLYCLG*SNFGPR Trigger: TCTAGGACCAAAATTTGACAAGCCTAGACAGTAGAG...CTTGCCTCTCAGAACTTGTGGTTTAAGAATAGCCTGAGCATCTTGTACAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTTGTACAAGATGCTCAGGCTATTCTTAAACCACAAGTTCTGAGAGGCAAGAACAGCATAGCTTCCTaGAAAATAAGACCAGACTGG | + |
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Preference number: 3 (lower is better) Translates to: VVVQDAQAILKPQVLRGKNSIAS*KIRPDW Trigger: CCAGTCTGGTCTTATTTTCAAGGAAGCTATGCTGTT...CTTGCCTCTCAGAACTTGTGGTTTAAGAATAGCCTGAGCATCTTGTACAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | AACTCTGAGATTGTTATTTTAGATGGCACCCCTTCATaGACTGAGCAAGGATGTGAAATCTGGAAGAAATTC | + |
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Preference number: 3 (lower is better) Translates to: NSEIVILDGTPS*TEQGCEIWKKF Trigger: GAATTTCTTCCAGATTTCACATCCTTGCTCAGTCCATGAAGGGGTGCCATCTAAAATAACAATCTCAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGTCCAGGTCCATTCATTaGGCTAGGAATTTCATAAAT | + |
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Preference number: 3 (lower is better) Translates to: EYILCEFLCECVTSLRMMSRSIH*ARNFIN Trigger: ATTTATGAAATTCCTAGCCAAATGAATGGACCTGGA...CATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| 3UTR CCA 72 bp | TACAACAGCATAGCTTCCTTGAAAATAAGACCAGACTaGAGCCTAATTCTTAGTCTTTTTACCAATATCTTT | + |
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Preference number: 3 (lower is better) Translates to: YNSIASLKIRPD*SLILSLFTNIF Trigger: AAAGATATTGGTAAAAAGACTAAGAATTAGGCTCCAGTCTGGTCTTATTTTCAAGGAAGCTATGCTGTTGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| CDS-3UTR GCA 90 bp | GGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTGTGCCCAGGCTACATTaGCCACATATACTGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GLDPEAGAQMPVCLWRGIVPRLH*PHILGW Trigger: CCAACCCAGTATATGTGGGCAATGTAGCCTGGGCAC...AATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGACTGGGTTGGCTGTGTTaGATTTGCCAAAACTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RGLDPEAGAQMPVCLWRGLGWLC*ICQNFS Trigger: TGAGAAGTTTTGGCAAATTCAACACAGCCAACCCAG...TCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR GCA 90 bp | TGGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTGATGGCCGGCCCCAAAAACCCTCCTaGTCCAGTCACCAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WGIYSLHVQWASLSSDGRPQKPS*SSHQAA Trigger: AGCTGCCTGGTGACTGGAGCAGGAGGGTTTTTGGGG...CCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| CDS-3UTR CCA 90 bp | GGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTGCTCTCCTCAGGTACTaGGTGTCAAGAATGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLDPEAGAQMPVCLWRGIALLRY*VSRMSP Trigger: AGGAGACATTCTTGACACCCAGTACCTGAGGAGAGC...AATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTGGTCTCGAAGGCCCCTaGCAGCCAGAATGTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KAAMNIVEHVSFLPVGTSGLEGP*QPECVP Trigger: GGGCACACATTCTGGCTGCCAGGGGCCTTCGAGACC...AGATGTCCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| CDS-3UTR CCA 90 bp | GGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTTCAGAGGAGAAGATGAAGGCTaGCACACTGGCTTGGATACA | + |
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Preference number: 4 (lower is better) Translates to: GPRSWGTDARVSLERNFRGEDEG*HTGLDT Trigger: TGTATCCAAGCCAGTGTGCCAGCCTTCATCTTCTCC...TCTGAAATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR TCA 90 bp | GGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTTCTTGTAGGAGAAAGTaGATGTGCTACCTGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GLDPEAGAQMPVCLWRGISCRRK*MCYLTV Trigger: CACTGTCAGGTAGCACATTCACTTTCTCCTACAAGA...AATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR TCA 90 bp | AGCAGCACCTGTCTTGTGTGTCTCTACTTGCTGAAGGACTTGATTACACCCAGGGCACCAACAACTGGATaGTCCTCTGCCCCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: SSTCLVCLYLLKDLITPRAPTTG*SSAPKT Trigger: GGTTTTTGGGGCAGAGGATCATCCAGTTGTTGGTGC...CCTGGGTGTAATCAAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGATGCTCAGGCTATGCACCAACAACTGGATaGTCCTCTGCCCCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: LRNRQTDFQSGCTRCSGYAPTTG*SSAPKT Trigger: GGTTTTTGGGGCAGAGGATCATCCAGTTGTTGGTGC...ATAGCCTGAGCATCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
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| CDS-3UTR TCA 90 bp | GACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTTCAGAAGACCATGTACTTTCATaGCACTCTTCCTCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DPEAGAQMPVCLWRGISEDHVLS*HSSSWP Trigger: TGGCCATGAGGAAGAGTGTCATGAAAGTACATGGTC...TTCTGAAATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
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| CDS-3UTR TCA 90 bp | GACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTTCAGAATCCTTGGATATTTGGTaGCTTCTTGGGGTCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPEAGAQMPVCLWRGISESLDIW*LLGVSK Trigger: CTTCGAGACCCCAAGAAGTCACCAAATATCCAAGGA...TTCTGAAATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCATATACAGTTTGCATGTCCAATGGGCATCTCTTTCCAGTGATGGCCGGCTCCTTGGATATTTGGTaGCTTCTTGGGGTCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAYTVCMSNGHLFPVMAGSLDIW*LLGVSK Trigger: CTTCGAGACCCCAAGAAGTCACCAAATATCCAAGGA...GCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTGTATATGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGATGCTCAGGCTATGCTCTCCTCAGGTACTaGGTGTCAAGAATGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNRQTDFQSGCTRCSGYALLRY*VSRMSP Trigger: AGGAGACATTCTTGACACCCAGTACCTGAGGAGAGC...ATAGCCTGAGCATCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAGAAGGCAGCAGCACCTGTCTTGTGTGTCTCTACTTGCTGAAGGACTTACAACAGAGATGCCCTaGCAAGCTCTCCTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VKRRQQHLSCVSLLAEGLTTEMP*QALLRY Trigger: GTACCTGAGGAGAGCTTGCCAGGGCATCTCTGTTGT...AAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCTGCCTTCTTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| 3UTR CAA 72 bp | AAAGAAGGCAGCAGCACCTGTCTTGTGTGTCTCTACTaGCTGAAGGACTTGATTACACCCAGGGCCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGSSTCLVCLY*LKDLITPRAMS Trigger: AGACATGGCCCTGGGTGTAATCAAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCTGCCTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATTGACCATGTACTTTCATaGCACTCTTCCTCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFLCECVTSLRMMPSRSIDHVLS*HSSSWP Trigger: TGGCCATGAGGAAGAGTGTCATGAAAGTACATGGTC...AATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTACAAGATGCTCAGGCTATTCTTAAACCACAAGTTCTGAGAGGCAAGACAACAGAGATGCCCTaGCAAGCTCTCCTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VVVQDAQAILKPQVLRGKTTEMP*QALLRY Trigger: GTACCTGAGGAGAGCTTGCCAGGGCATCTCTGTTGT...CTTGCCTCTCAGAACTTGTGGTTTAAGAATAGCCTGAGCATCTTGTACAACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | CCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAAGGTCTCGAAGGCCCCTaGCAGCCAGAATGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLGFIKQAEFSEGYTCFEGLEGP*QPECVP Trigger: GGGCACACATTCTGGCTGCCAGGGGCCTTCGAGACC...TTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGATGCTCAGGCTATCCCCATAAATGCACATaGGCCTTAATGCACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNRQTDFQSGCTRCSGYPHKCT*ALMHKF Trigger: AAACTTGTGCATTAAGGCCCATGTGCATTTATGGGG...ATAGCCTGAGCATCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTCTCCACCTTTCTCATACCAGTGCTACAATTTTATGGAAAGCTGAAACAGTGCCCAGGCTACATTaGCCACATATACTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLHLSHTSATILWKAETVPRLH*PHILGW Trigger: CCAACCCAGTATATGTGGGCAATGTAGCCTGGGCAC...TGTTTCAGCTTTCCATAAAATTGTAGCACTGGTATGAGAAAGGTGGAGAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR GCA 90 bp | CCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAAGGCAGCCAGAATGTGTaGCCAGGCTACATTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGFIKQAEFSEGYTCFEGSQNV*PGYIAH Trigger: GTGGGCAATGTAGCCTGGGCACACATTCTGGCTGCC...TTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAGAAGGCAGCAGCACCTGTCTTGTGTGTCTCTACTTGCTGAAGGACTTGCCTCCAATAAGTTCTaGGTACCTTTCAGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VKRRQQHLSCVSLLAEGLASNKF*VPFRLT Trigger: TGTCAATCTGAAAGGTACCCAGAACTTATTGGAGGC...AAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCTGCCTTCTTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACCTGTCTTGTGTGTCTCTACTTGCTGAAGGACTTGATTACACCCAGGATTGCCCACATATACTaGGTTGGCTGTGTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTCLVCLYLLKDLITPRIAHIY*VGCVEF Trigger: AAATTCAACACAGCCAACCCAGTATATGTGGGCAAT...CCTGGGTGTAATCAAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| 3UTR CAA 72 bp | CTACATCCACCCAAAGACTTCCTCTACTGTCTAGGCTaGTCAAATTTTGGTCCTAGAGCCTGGTATCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHPPKDFLYCLG*SNFGPRAWYLK Trigger: CTTCAGATACCAGGCTCTAGGACCAAAATTTGACAAGCCTAGACAGTAGAGGAAGTCTTTGGGTGGATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGATCCTTGTTTCTGGTCTaGAGACCTTGTCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GFIKQAEFSEGYTCFECGSLFLV*RPCPGP Trigger: GGGTCCTGGACAAGGTCTTCAGACCAGAAACAAGGA...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGAAGGCTATACATGTTTTGAATGCGGAGAGAAATTAATGGAAAGAGCTCCCCAAAAACCCTCCTaGTCCAGTCACCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSEGYTCFECGEKLMERAPQKPS*SSHQAA Trigger: AGCTGCCTGGTGACTGGAGCAGGAGGGTTTTTGGGG...AGCTCTTTCCATTAATTTCTCTCCGCATTCAAAACATGTATAGCCTTCAGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAGAAGGCAGCAGCACCTGTCTTGTGTGTCTCTACTTGCTGAAGGACTTTATATATCTGTAGATTaGACTCAGGAGGAAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKRRQQHLSCVSLLAEGLYISVD*TQEEAH Trigger: GTGAGCTTCCTCCTGAGTCCAATCTACAGATATATA...AAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCTGCCTTCTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | CCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAACTCCCAGCTGACAAGTaGCTCATAGCCCAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLGFIKQAEFSEGYTCFELPADK*LIAQIS Trigger: CGAGATCTGGGCTATGAGCCACTTGTCAGCTGGGAG...TTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTCTCCCAGCTGACAAGTaGCTCATAGCCCAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLGFIKQAEFSEGYTCLPADK*LIAQIS Trigger: CGAGATCTGGGCTATGAGCCACTTGTCAGCTGGGAG...ACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACAATACATTGGAATTAGTCTCACATCTGCATCTGTTTCTGATTTTCCCTTCCTTGTTTCTGGTCTaGAGACCTTGTCCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KDNTLELVSHLHLFLIFPSLFLV*RPCPGP Trigger: GGGTCCTGGACAAGGTCTTCAGACCAGAAACAAGGA...AGGGAAAATCAGAAACAGATGCAGATGTGAGACTAATTCCAATGTATTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTTCCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACAGGAGAAGATGAAGGCTaGCACACTGGCTTGGATACA | + |
|
Preference number: 4 (lower is better) Translates to: LFLPLGFIKQAEFSEGYTGEDEG*HTGLDT Trigger: TGTATCCAAGCCAGTGTGCCAGCCTTCATCTTCTCC...TGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGGAAGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACAATACATTGGAATTAGTCTCACATCTGCATCTGTTTCTGATTTTCCCTCTGGGTTGGCTGTGTTaGATTTGCCAAAACTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDNTLELVSHLHLFLIFPLGWLC*ICQNFS Trigger: TGAGAAGTTTTGGCAAATTCAACACAGCCAACCCAG...AGGGAAAATCAGAAACAGATGCAGATGTGAGACTAATTCCAATGTATTGTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGAAGAAGCCCCACTCCTTaGTCAAGGTGTAACTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: GFIKQAEFSEGYTCFECGRSPTP*SRCNLY Trigger: ATATAAGTTACACCTTGAGCAAGGAGTGGGGCTTCT...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGACCCCATAAATGCACATaGGCCTTAATGCACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFIKQAEFSEGYTCFECGPHKCT*ALMHKF Trigger: AAACTTGTGCATTAAGGCCCATGTGCATTTATGGGG...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATATGGTaGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIW*QIPLAPWVLSL Trigger: TAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCATATAGGTGGAACAACATTATGAACTAACCAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGAGAGAAATTAATGTCTTGTAGGAGAAAGTaGATGTGCTACCTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAEFSEGYTCFECGEKLMSCRRK*MCYLTV Trigger: CACTGTCAGGTAGCACATTCACTTTCTCCTACAAGA...CATTAATTTCTCTCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTAGAAGCCCCACTCCTTaGTCAAGGTGTAACTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLGFIKQAEFSEGYTCFRSPTP*SRCNLY Trigger: ATATAAGTTACACCTTGAGCAAGGAGTGGGGCTTCT...AAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGACTTGATTAAGGCACTAAATTGGCCTCTGTGTCAAAAGAAGGCAGCATATGTTAGAAATGAGTaGACTTCTCTCCCCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FGDLIKALNWPLCQKKAAYVRNE*TSLPIN Trigger: ATTTATGGGGAGAGAAGTCCACTCATTTCTAACATA...TGCTGCCTTCTTTTGACACAGAGGCCAATTTAGTGCCTTAATCAAGTCACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGAATTGCCCACATATACTaGGTTGGCTGTGTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GFIKQAEFSEGYTCFECGIAHIY*VGCVEF Trigger: AAATTCAACACAGCCAACCCAGTATATGTGGGCAAT...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGATATATATCTGTAGATTaGACTCAGGAGGAAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFIKQAEFSEGYTCFECGYISVD*TQEEAH Trigger: GTGAGCTTCCTCCTGAGTCCAATCTACAGATATATA...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTTGCTTGTCTCTAGGTTaGAGAATTCCTTCCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLGFIKQAEFSEGYTCFCLSLG*RIPSLF Trigger: AAACAAGGAAGGAATTCTTCAACCTAGAGACAAGCA...AAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCTCCACCTTTCTCATACCAGTGCTACAATTTTATGGAAAGCTGAAACATATGTTAGAAATGAGTaGACTTCTCTCCCCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLHLSHTSATILWKAETYVRNE*TSLPIN Trigger: ATTTATGGGGAGAGAAGTCCACTCATTTCTAACATA...TGTTTCAGCTTTCCATAAAATTGTAGCACTGGTATGAGAAAGGTGGAGAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAACTGGGTTGGCTGTGTaGAATTTGCCAAAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGLDPEAGAQMPVCLWRGTGLAV*NLPKLL Trigger: GAGAAGTTTTGGCAAATTCAACACAGCCAACCCAGT...TCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTACTGGGTTGGCTGTGTaGAATTTGCCAAAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLDPEAGAQMPVCLWRGITGLAV*NLPKLL Trigger: GAGAAGTTTTGGCAAATTCAACACAGCCAACCCAGT...AATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | GGACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTTCAGAGTATATATCTGTAGATaGGACTCAGGAGGAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPRSWGTDARVSLERNFRVYICR*DSGGSS Trigger: TGAGCTTCCTCCTGAGTCCAATCTACAGATATATAC...TCTGAAATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCACCTGTCTTGTGTGTCTCTACTTGCTGAAGGACTTGATTACACCCAGGCTCCAGATCTTCCTCTaGCACCAACAACTGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTCLVCLYLLKDLITPRLQIFL*HQQLDD Trigger: ATCATCCAGTTGTTGGTGCAAGAGGAAGATCTGGAG...CCTGGGTGTAATCAAGTCCTTCAGCAAGTAGAGACACACAAGACAGGTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | GACCCAGAAGCTGGGGCACAGATGCCCGTGTGTCTTTGGAGAGGAATTTCAGAAGTATATATCTGTAGATaGGACTCAGGAGGAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DPEAGAQMPVCLWRGISEVYICR*DSGGSS Trigger: TGAGCTTCCTCCTGAGTCCAATCTACAGATATATAC...TTCTGAAATTCCTCTCCAAAGACACACGGGCATCTGTGCCCCAGCTTCTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTGGATATATGCCAAAGAATGCTTGTCTCTAGGTaGAAGAATTCCTTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WSMCPSYRLGHLLDICQRMLVSR*KNSFLV Trigger: AACAAGGAAGGAATTCTTCAACCTAGAGACAAGCAT...TCTTTGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTTTTGAATGCGGATCCAACACTGTCACCTaGATGCTTGTCTCTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GFIKQAEFSEGYTCFECGSNTVT*MLVSRL Trigger: CAACCTAGAGACAAGCATCAAGGTGACAGTGTTGGA...TCCGCATTCAAAACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTGGATATATGCCAAAGATTGGCTGTGTTGAATTaGCCAAAACTTCTCAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: WSMCPSYRLGHLLDICQRLAVLN*PKLLRI Trigger: TATTCTGAGAAGTTTTGGCAAATTCAACACAGCCAA...TCTTTGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATGTCTCCAGATCTTCCTCTaGCACCAACAACTGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLPLGFIKQAEFSEGYTCLQIFL*HQQLDD Trigger: ATCATCCAGTTGTTGGTGCAAGAGGAAGATCTGGAG...ACATGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGGAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTGAAGGCTATACATGTTTTGAATGCGGAGAGAAATTAATGGAAAGAGCTATGCTTGTCTCTAGGTaGAAGAATTCCTTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FSEGYTCFECGEKLMERAMLVSR*KNSFLV Trigger: AACAAGGAAGGAATTCTTCAACCTAGAGACAAGCAT...AGCTCTTTCCATTAATTTCTCTCCGCATTCAAAACATGTATAGCCTTCAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCTTCCATTGGGCTTCATAAAGCAAGCAGAATTTTCTGAAGGCTATACATTGGCTGTGTTGAATTaGCCAAAACTTCTCAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LFLPLGFIKQAEFSEGYTLAVLN*PKLLRI Trigger: TATTCTGAGAAGTTTTGGCAAATTCAACACAGCCAA...TGTATAGCCTTCAGAAAATTCTGCTTGCTTTATGAAGCCCAATGGAAGAAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 |
||
| CDS TCA 72 bp | CTGAGCTTTCTTGTAGGAGAAAGTGAATGTGCTACCTaGCAGTGTGACCAAGTGGCGGTTAAAGGGAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LSFLVGESECAT*QCDQVAVKGRY Trigger: ATACCTCCCTTTAACCGCCACTTGGTCACACTGTCAGGTAGCACATTCACTTTCTCCTACAAGAAAGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 ENSMUST00000177651.2 |
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| CDS CAA 90 bp | ATGTGTGCCCAGGCTACATTGCCCACATATACTGGGTTGGCTGTGTaGAATTTGCCAAAACTTCTCAGAATACCCTTATGTTTAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: MCAQATLPTYTGLAV*NLPKLLRIPLCLRA Trigger: GGCCCTTAAACATAAGGGTATTCTGAGAAGTTTTGGCAAATTCAACACAGCCAACCCAGTATATGTGGGCAATGTAGCCTGGGCACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 ENSMUST00000177651.2 |
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| CDS CAA 72 bp | ATGTGTGCCCAGGCTACATTGCCCACATATACTGGGTaGGCTGTGTTGAATTTGCCAAAACTTCTCAGAATA | + |
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Preference number: 6 (lower is better) Translates to: MCAQATLPTYTG*AVLNLPKLLRI Trigger: TATTCTGAGAAGTTTTGGCAAATTCAACACAGCCAACCCAGTATATGTGGGCAATGTAGCCTGGGCACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 ENSMUST00000177651.2 |
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| CDS CAA 90 bp | GCCCAGGCTACATTGCCCACATATACTGGGTTGGCTGTGTTGAATTaGCCAAAACTTCTCAGAATACCCTTATGTTTAAGGGCCATAATT | + |
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Preference number: 6 (lower is better) Translates to: AQATLPTYTGLAVLN*PKLLRIPLCLRAII Trigger: AATTATGGCCCTTAAACATAAGGGTATTCTGAGAAGTTTTGGCAAATTCAACACAGCCAACCCAGTATATGTGGGCAATGTAGCCTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 ENSMUST00000177651.2 |
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| CDS CAA 72 bp | CAGGCTACATTGCCCACATATACTGGGTTGGCTGTGTaGAATTTGCCAAAACTTCTCAGAATACCCTTATGT | + |
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Preference number: 6 (lower is better) Translates to: QATLPTYTGLAV*NLPKLLRIPLC Trigger: ACATAAGGGTATTCTGAGAAGTTTTGGCAAATTCAACACAGCCAACCCAGTATATGTGGGCAATGTAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107021.8 ENSMUST00000107022.8 ENSMUST00000177651.2 |
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