Pregenerated sensors for HSD17B7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026675Ensembl transcript IDs: ENSMUST00000027989.13, ENSMUST00000111353.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTAGCAGTTCCAACAGGACACTGCTCTGGAGGGGTAAGTAGTTaGTCCCTCTACTTTGCCAGTCCTTTCTCACATGTGTGTGCACGC | + |
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Preference number: 1 (lower is better) Translates to: PLAVPTGHCSGGVSS*SLYFASPFSHVCAR Trigger: GCGTGCACACACATGTGAGAAAGGACTGGCAAAGTAGAGGGACCAACTACTTACCCCTCCAGAGCAGTGTCCTGTTGGAACTGCTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 90 bp | GCTCCTTCCCTGAAAAGCTTATATGCTGACAGGGGCACCCGAGAGTaGGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: APSLKSLYADRGTRE*VFHRTGTRNPTTGM Trigger: CATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAGCATATAAGCTTTTCAGGGAAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| 3UTR CCA 90 bp | AAGCTTCAGGCTGTACTGTGTCCCCATCACACAAGTCAAAACTACTaGGCTCTAGGAGGCAGAAAGCGATCCAAGGATGCACCGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: KLQAVLCPHHTSQNY*ALGGRKRSKDAPQE Trigger: TTCCTGCGGTGCATCCTTGGATCGCTTTCTGCCTCCTAGAGCCCAGTAGTTTTGACTTGTGTGATGGGGACACAGTACAGCCTGAAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR GCA 90 bp | GGTCCCTCTACTTTGCCAGTCCTTTCTCACATGTGTGTGCACGCCTaGAAAAATGTGCACACACACAGTCTTGGAGATCACTGTGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: GPSTLPVLSHMCVHA*KNVHTHSLGDHCER Trigger: CCTTTCACAGTGATCTCCAAGACTGTGTGTGTGCACATTTTTGCAGGCGTGCACACACATGTGAGAAAGGACTGGCAAAGTAGAGGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 90 bp | GAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTGGTGTGGTGTaGAGAAAAATTCACAGAACACTCATTCAAGCACAACAGATCCTG | + |
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Preference number: 1 (lower is better) Translates to: EQQECSKEEIRAGVV*RKIHRTLIQAQQIL Trigger: CAGGATCTGTTGTGCTTGAATGAGTGTTCTGTGAATTTTTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 90 bp | AAAGGGAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTGGTGTaGTGTGAAGAAAAATTCACAGAACACTCATTCAAGCACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: KGNNKSVPRRRYELV*CEEKFTEHSFKHNR Trigger: TCTGTTGTGCTTGAATGAGTGTTCTGTGAATTTTTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTCCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 90 bp | AACACAAAGGGAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTaGTGTGGTGTGAAGAAAAATTCACAGAACACTCATTCAAGCACA | + |
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Preference number: 1 (lower is better) Translates to: NTKGTTRVFQGGDTS*CGVKKNSQNTHSST Trigger: TGTGCTTGAATGAGTGTTCTGTGAATTTTTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTCCCTTTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR GCA 90 bp | AGAAACAAAGGTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTaGCTTGCTGACCATGGGCAGATACTAGTATCAGGAATAAAACAG | + |
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Preference number: 1 (lower is better) Translates to: RNKGSLQIPANWKSS*LADHGQILVSGIKQ Trigger: CTGTTTTATTCCTGATACTAGTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAACCTTTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 90 bp | TCAACTGTTCATACATTCATCAAGAGCCCAGGAAATGGCAAGCACTaGTCAAACACTAGAAATATAGCCAGAAACAACCATGGAAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: STVHTFIKSPGNGKH*SNTRNIARNNHGRS Trigger: AGACCTTCCATGGTTGTTTCTGGCTATATTTCTAGTGTTTGACCAGTGCTTGCCATTTCCTGGGCTCTTGATGAATGTATGAACAGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 90 bp | TTGAATACCTTTCTCTTGAAAATGACTACATGGACGGACCATGAATaGATAAGATTAGCCAAAGCAGCATATGAAGGAGAATGTAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: LNTFLLKMTTWTDHE*IRLAKAAYEGECKE Trigger: CTCTTTACATTCTCCTTCATATGCTGCTTTGGCTAATCTTATTCATTCATGGTCCGTCCATGTAGTCATTTTCAAGAGAAAGGTATTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGAGATGTTTGTGAGCCACCACATGGTCCTAGGAATCAAACCTGGGTCCCCTTCAGAAGGGCGGTaGCCTGCAGTGTCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KLEMFVSHHMVLGIKPGSPSEGR*PAVSGP Trigger: AGGCCCAGACACTGCAGGCCACCGCCCTTCTGAAGG...GGACCCAGGTTTGATTCCTAGGACCATGTGGTGGCTCACAAACATCTCTAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR GCA 90 bp | ACTGAAGTTAGAGATGTTTGTGAGCCACCACATGGTCCTAGGAATCAAACCTGGGCCTGGTCTACAGAGTaGGTTCCAGGGCAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TEVRDVCEPPHGPRNQTWAWSTE*VPGQAA Trigger: GGCTGCCTGCCCTGGAACGCACTCTGTAGACCAGGC...CCAGGTTTGATTCCTAGGACCATGTGGTGGCTCACAAACATCTCTAACTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | GGGAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTGGTGTGGTGTGAAGAAAGGGGCCCGTGGGTGTaGACTCATTCTCCTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GNNKSVPRRRYELVWCEERGPWV*THSPLY Trigger: ATACAGAGGAGAATGAGTCCACACCCACGGGCCCCT...TTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGGTGGCCTGCAGTGTCTaGGCCTCAGCATGCTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: RNEAGVKVRNTASNRALRVACSV*ASACWL Trigger: AAGCCAGCATGCTGAGGCCCAGACACTGCAGGCCAC...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR TCA 90 bp | AGCTCGGTACTGTCTCCTGGAAACAAGCACATGGGGAAGAGAAGGGGCCATCCTACTCAGGATGAAGAATaGAAAACCACCCCTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSVLSPGNKHMGKRRGHPTQDEE*KTTPCF Trigger: GAAGCAAGGGGTGGTTTTTCATTCTTCATCCTGAGT...AGGATGGCCCCTTCTCTTCCCCATGTGCTTGTTTCCAGGAGACAGTACCGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | GGGAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTGGTGTGGTGTGAAGAATATCACCCAGCGAGATaGAAAGCCACGTGTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GNNKSVPRRRYELVWCEEYHPAR*KATCAM Trigger: CATGGCACACGTGGCTTTCCATCTCGCTGGGTGATA...TTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | AGCTCGGTACTGTCTCCTGGAAACAAGCACATGGGGAAGAGAAGGGGCCATCCTACAAGTCAAAACTACTaGGCTCTAGGAGGCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SSVLSPGNKHMGKRRGHPTSQNY*ALGGRK Trigger: CTTTCTGCCTCCTAGAGCCCAGTAGTTTTGACTTGT...AGGATGGCCCCTTCTCTTCCCCATGTGCTTGTTTCCAGGAGACAGTACCGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCGGAGGGGTAAGTAGTTaGTCCCTCTACTTTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VLCKYQQTGKAPALLTMGGGVSS*SLYFAS Trigger: ACTGGCAAAGTAGAGGGACCAACTACTTACCCCTCC...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGAGATGTTTGTGAGCCACCACATGGTCCTAGGAATCAAACCTGGGTCCAGTTCAAGGCCAGCCTaGTCTACAGAGTGCGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KLEMFVSHHMVLGIKPGSSSRPA*STECVP Trigger: TGGAACGCACTCTGTAGACCAGGCTGGCCTTGAACT...GGACCCAGGTTTGATTCCTAGGACCATGTGGTGGCTCACAAACATCTCTAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCTCTTGGAGATCACTGTaGAAGGTAGGAGGAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: VLCKYQQTGKAPALLTMGSWRSL*KVGGEI Trigger: GATCTCTCCTCCTACCTTTCACAGTGATCTCCAAGA...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAAATCCCACCACAGGCATGGGGCCTGTTCTAAAGAGACAGAGAAGGCTGCTGAGTTCTGATGGGTaGCAGACATCAACAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: TRNPTTGMGPVLKRQRRLLSSDG*QTSTRT Trigger: TGTTCTTGTTGATGTCTGTCACCCATCAGAACTCAG...CAGCCTTCTCTGTCTCTTTAGAACAGGCCCCATGCCTGTGGTGGGATTTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCTTGGTCCCTCTACTTTaGCAGTCCTTTCTCACATGT | + |
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Preference number: 2 (lower is better) Translates to: VLCKYQQTGKAPALLTMGLVPLL*QSFLTC Trigger: ACATGTGAGAAAGGACTGGCAAAGTAGAGGGACCAA...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR TCA 90 bp | TGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCAGATACTGGACGGACCATGAATaGATAAGATTAGCCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: CKYQQTGKAPALLTMGRYWTDHE*IRLAKA Trigger: TGCTTTGGCTAATCTTATTCATTCATGGTCCGTCCA...GTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCTGGCTTATGGTTTACTaGAAATGTGTATCACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VLCKYQQTGKAPALLTMGWLMVY*KCVSPS Trigger: GCTGGGTGATACACATTTGCAGTAAACCATAAGCCA...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGACGCCTGCAAAAATGTaGACACACACAGTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RNEAGVKVRNTASNRALRTPAKM*THTVLE Trigger: CTCCAAGACTGTGTGTGTGCACATTTTTGCAGGCGT...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR TCA 90 bp | TGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCAGATACAGAGGGAATTCCCAATaGAGCCAGCAAAAAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: CKYQQTGKAPALLTMGRYRGNSQ*SQQKVN Trigger: ATTAACTTTTTGCTGGCTTCATTGGGAATTCCCTCT...GTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CAA 90 bp | CCTAGAAGCCAGTTCCAACTTTTAAAAGATTTATTCTTATGTGTTTaGTCTGCACAGATGCCTGGGCATCGGATGCACTTGTGGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: PRSQFQLLKDLFLCV*SAQMPGHRMHLWYP Trigger: TGGGTACCACAAGTGCATCCGATGCCCAGGCATCTGTGCAGACAAAACACATAAGAATAAATCTTTTAAAAGTTGGAACTGGCTTCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 72 bp | ATGGGGAAGAGAAGGGGCCATCCTTCAGAAGGGCGGTaGCCTGCAGTGTCTGGGCCTCAGCATGCTGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: MGKRRGHPSEGR*PAVSGPQHAGL Trigger: TAAGCCAGCATGCTGAGGCCCAGACACTGCAGGCCACCGCCCTTCTGAAGGATGGCCCCTTCTCTTCCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 72 bp | GCAGAGGCAGGTGATTTTCTGAGTTCAAGGCCAGCCTaGTCTACAGAGTGCGTTCCAGGGCAGGCAGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: AEAGDFLSSRPA*STECVPGQAAS Trigger: ACTGGCTGCCTGCCCTGGAACGCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAAATCACCTGCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | CTTGCTTCCCAGAGACAGAGGAGGGGCCCGTGGGTGTGGACTCATTCTCCTCTGTGCACACACACAGTCTaGGAGATCACTGTGAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LASQRQRRGPWVWTHSPLCTHTV*EITVKG Trigger: ACCTTTCACAGTGATCTCCAAGACTGTGTGTGTGCA...CAGAGGAGAATGAGTCCACACCCACGGGCCCCTCCTCTGTCTCTGGGAAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | GGGAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTGGTGTGGTGTGAAGAAGGGCATCGGATGCACTaGTGGTACCCACCGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: GNNKSVPRRRYELVWCEEGHRMH*WYPPRP Trigger: TGGCCTCGGTGGGTACCACAAGTGCATCCGATGCCC...TTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR GCA 72 bp | TATGTGTTTTGTCTGCACAGATGCCTGGGCATCGGATaGACTTGTGGTACCCACCGAGGCCAGAAGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: YVFCLHRCLGIG*TCGTHRGQKRA Trigger: TGCCCTCTTCTGGCCTCGGTGGGTACCACAAGTGCATCCGATGCCCAGGCATCTGTGCAGACAAAACACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 72 bp | CCACCCCTTGCTTCCCAGAGACAGAGGAGGGGCCCGTaGGTGTGGACTCATTCTCCTCTGTATCTTTACAAA | + |
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Preference number: 3 (lower is better) Translates to: PPLASQRQRRGP*VWTHSPLYLYK Trigger: TTTGTAAAGATACAGAGGAGAATGAGTCCACACCCACGGGCCCCTCCTCTGTCTCTGGGAAGCAAGGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 72 bp | CGGGCAGTGGTAGTGCATGCTTTTAGTCCCAGCACTTaGGAGGCAGAGGCAGGTGATTTTCTGAGTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: RAVVVHAFSPST*EAEAGDFLSSR Trigger: CCTTGAACTCAGAAAATCACCTGCCTCTGCCTCCCAAGTGCTGGGACTAAAAGCATGCACTACCACTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 72 bp | AGACAGCATACGAGGGAAACAGGTATGCTCCTTCCCTaGAAAGCTTATATGCTGACAGGGGCACCCGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: RQHTRETGMLLP*KAYMLTGAPES Trigger: ACTCTCGGGTGCCCCTGTCAGCATATAAGCTTTTCAGGGAAGGAGCATACCTGTTTCCCTCGTATGCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| 3UTR CCA 72 bp | GCTGTACTGTGTCCCCATCACACAAGTCAAAACTACTaGGCTCTAGGAGGCAGAAAGCGATCCAAGGATGCA | + |
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Preference number: 3 (lower is better) Translates to: AVLCPHHTSQNY*ALGGRKRSKDA Trigger: TGCATCCTTGGATCGCTTTCTGCCTCCTAGAGCCCAGTAGTTTTGACTTGTGTGATGGGGACACAGTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCATGAAAAACCACCCCTaGCTTCCCAGAGACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: VLCKYQQTGKAPALLTMGMKNHP*LPRDRG Trigger: TCCTCTGTCTCTGGGAAGCAAGGGGTGGTTTTTCAT...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 72 bp | GGCCTGCAGTGTCTGGGCCTCAGCATGCTGGCTTATTaGTCTCTAAGGAACCTGATTCTCTACCAAAATGAG | + |
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Preference number: 3 (lower is better) Translates to: GLQCLGLSMLAY*SLRNLILYQNE Trigger: CTCATTTTGGTAGAGAATCAGGTTCCTTAGAGATCAATAAGCCAGCATGCTGAGGCCCAGACACTGCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 72 bp | CTGAAAAGCTTATATGCTGACAGGGGCACCCGAGAGTaGGTGTTCCACAGAACAGGTACAAGAAATCCCACC | + |
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Preference number: 3 (lower is better) Translates to: LKSLYADRGTRE*VFHRTGTRNPT Trigger: GGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAGCATATAAGCTTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| 3UTR CCA 72 bp | AGGAACCTGATTCTCTACCAAAATGAGGAATTCTCATaGTTCACACAGAACACGGATCCTCAGGCAAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: RNLILYQNEEFS*FTQNTDPQARP Trigger: CGGCCTTGCCTGAGGATCCGTGTTCTGTGTGAACCATGAGAATTCCTCATTTTGGTAGAGAATCAGGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGGTTGGTCCCTCTACTTaGCCAGTCCTTTCTCACATG | + |
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Preference number: 3 (lower is better) Translates to: RNEAGVKVRNTASNRALRVGPST*PVLSHM Trigger: CATGTGAGAAAGGACTGGCAAAGTAGAGGGACCAAC...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | TGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCAGATACGGTGACAGCTTTGCTTaGCAGATGAGAAACATGAGT | + |
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Preference number: 3 (lower is better) Translates to: CKYQQTGKAPALLTMGRYGDSFA*QMRNMS Trigger: ACTCATGTTTCTCATCTGCAAAGCAAAGCTGTCACC...GTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 72 bp | GGCAGAAACAAAGGTTCTTTGCAAATACCAGCAAACTaGAAAAGCTCCTGCCTTGCTGACCATGGGCAGATA | + |
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Preference number: 3 (lower is better) Translates to: GRNKGSLQIPAN*KSSCLADHGQI Trigger: TATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAACCTTTGTTTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCTGGCGTCCTAGCAGTTaGTCAGGGTTTTTAAAATTT | + |
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Preference number: 3 (lower is better) Translates to: VLCKYQQTGKAPALLTMGWRPSS*SGFLKF Trigger: AAATTTTAAAAACCCTGACAAACTGCTAGGACGCCA...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGCAGCATGCTGGCTTATaGATCTCTAAGGAACCTGAT | + |
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Preference number: 3 (lower is better) Translates to: RNEAGVKVRNTASNRALRQHAGL*ISKEPD Trigger: ATCAGGTTCCTTAGAGATCAATAAGCCAGCATGCTG...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR TCA 72 bp | GCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTaGCCATGGGCAGATACTAGTATCAGGAATAAAACA | + |
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Preference number: 3 (lower is better) Translates to: ANTSKLEKLLPC*PWADTSIRNKT Trigger: TGTTTTATTCCTGATACTAGTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR CCA 72 bp | GGAACAACAAGAGTGTTCCAAGGAGGAGATACGAGCTaGTGTGGTGTGAAGAAAAATTCACAGAACACTCAT | + |
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Preference number: 3 (lower is better) Translates to: GTTRVFQGGDTS*CGVKKNSQNTH Trigger: ATGAGTGTTCTGTGAATTTTTCTTCACACCACACCAGCTCGTATCTCCTCCTTGGAACACTCTTGTTGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| 3UTR GCA 72 bp | AAAACTCATCATCTGACACATAAAAGTCAACTCTTCTaGTTCTACTGTGTACCGGATGGCGTCCTAGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KTHHLTHKSQLF*FYCVPDGVLAV Trigger: AACTGCTAGGACGCCATCCGGTACACAGTAGAAGCAGAAGAGTTGACTTTTATGTGTCAGATGATGAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| 3UTR TCA 72 bp | CTATACGACTTTATTTATTTATTAAAAGCCTCCACGTaGGACAGCATACGAGGGAAACAGGTATGCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYDFIYLLKAST*DSIRGKQVCSF Trigger: GAAGGAGCATACCTGTTTCCCTCGTATGCTGTCTCACGTGGAGGCTTTTAATAAATAAATAAAGTCGTATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| 3UTR TCA 72 bp | TTTCTCTTGAAAATGACTACATGGACGGACCATGAATaGATAAGATTAGCCAAAGCAGCATATGAAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLLKMTTWTDHE*IRLAKAAYEGE Trigger: TTCTCCTTCATATGCTGCTTTGGCTAATCTTATTCATTCATGGTCCGTCCATGTAGTCATTTTCAAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| 3UTR TCA 72 bp | CTTTATGATAAAAATGTCTTGCCATCTCTAGCGTTCTaGTACTCAGGGATGGCTCTTAAGATTTATGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYDKNVLPSLAF*YSGMALKIYGE Trigger: TTCTCCATAAATCTTAAGAGCCATCCCTGAGTATCAGAACGCTAGAGATGGCAAGACATTTTTATCATAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| 3UTR TCA 72 bp | GACTTAATATACCCTGACTATATTAACATCAAACTATaGAATCCCAACAGACTACACCTAGAAGCCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLIYPDYINIKL*NPNRLHLEASS Trigger: GGAACTGGCTTCTAGGTGTAGTCTGTTGGGATTTCATAGTTTGATGTTAATATAGTCAGGGTATATTAAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR GCA 90 bp | TCGGTACTGTCTCCTGGAAACAAGCACATGGGGAAGAGAAGGGGCCATCCTTCACCCCGGACCACCGACTaGAGGCTGCTGACATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVLSPGNKHMGKRRGHPSPRTTD*RLLTSI Trigger: GATGGATGTCAGCAGCCTGCAGTCGGTGGTCCGGGG...TGAAGGATGGCCCCTTCTCTTCCCCATGTGCTTGTTTCCAGGAGACAGTACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAATCCCACCACAGGCATGGGGCCTGTTCTAAAGAGACAGAGAAGGCTGACTTCGGCGGAGGGGTaGGAGGCCAGCAGGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TRNPTTGMGPVLKRQRRLTSAEG*EASRVS Trigger: AGATACCCTGCTGGCCTCTCACCCCTCCGCCGAAGT...CAGCCTTCTCTGTCTCTTTAGAACAGGCCCCATGCCTGTGGTGGGATTTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR TCA 90 bp | CACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATCCGACTGCAGGCTGCTaGCATCCATCTGCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HPRVSVPQNRYKKSHHRHPTAGC*HPSARC Trigger: GCATCGTGCAGATGGATGTCAGCAGCCTGCAGTCGG...ATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR GCA 90 bp | AGCTCGGTACTGTCTCCTGGAAACAAGCACATGGGGAAGAGAAGGGGCCATCCTGTTTCAAACACCTCCTaGAACCCGTCGGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSVLSPGNKHMGKRRGHPVSNTS*NPSAVT Trigger: GGTCACTGCCGACGGGTTGCAGGAGGTGTTTGAAAC...AGGATGGCCCCTTCTCTTCCCCATGTGCTTGTTTCCAGGAGACAGTACCGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTTCCAACAGGACACTGCTCTGGAGGGGTAAGTAGTTGGTCCCTCTACTCTGAACGGTGGTCCTaGCACGCTTTTCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVPTGHCSGGVSSWSLYSERWS*HAFPAP Trigger: TGGAGCTGGAAAAGCGTGTCAGGACCACCGTTCAGA...GTAGAGGGACCAACTACTTACCCCTCCAGAGCAGTGTCCTGTTGGAACTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR GCA 90 bp | ACAAGCACATGGGGAAGAGAAGGGGCCATCCTTCAGAAGGGCGGTGGCCTGCAGATCTCGAACAGCTCTTaGTTTGCTCAGGTTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TSTWGREGAILQKGGGLQISNSS*FAQVPT Trigger: TGTAGGAACCTGAGCAAAGCAAGAGCTGTTCGAGAT...CTGCAGGCCACCGCCCTTCTGAAGGATGGCCCCTTCTCTTCCCCATGTGCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR GCA 90 bp | GTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGGGGCCTGTTCTAAATCCGGGCCTTTGGAGTaGTGGATGTCCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPQNRYKKSHHRHGACSKSGPLE*WMSSRL Trigger: CAGCCTGGAGGACATCCAGCACTCCAAAGGCCCGGA...TTTAGAACAGGCCCCATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CCA 90 bp | GTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGGGGCCTGTGAGGGGTTGTCCGCATaGCAGAGAAGTGGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSVPQNRYKKSHHRHGACEGLSA*QRSGSS Trigger: ACTGGAACCACTTCTCTGCCATGCGGACAACCCCTC...ACAGGCCCCATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR TCA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGACTTCGGCGGAGGGGTaGGAGGCCAGCAGGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RNEAGVKVRNTASNRALRTSAEG*EASRVS Trigger: AGATACCCTGCTGGCCTCTCACCCCTCCGCCGAAGT...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR TCA 90 bp | GTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGGGGCCTGTTCTAAACCGCATCCTGGCCTGTaGTGCTGCACATCTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPQNRYKKSHHRHGACSKPHPGL*CCTSHL Trigger: CAAGTGAGATGTGCAGCATCACAGGCCAGGATGCGG...TTTAGAACAGGCCCCATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR GCA 90 bp | CACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGTTTCAAACACCTCCTaGAACCCGTCGGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HPRVSVPQNRYKKSHHRHVSNTS*NPSAVT Trigger: GGTCACTGCCGACGGGTTGCAGGAGGTGTTTGAAAC...ATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CCA 90 bp | GTTGGTCCCTCTACTTTGCCAGTCCTTTCTCACATGTGTGTGCACGCCTGCAAAGAGGGGTTGTCCGCATaGCAGAGAAGTGGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGPSTLPVLSHMCVHACKEGLSA*QRSGSS Trigger: ACTGGAACCACTTCTCTGCCATGCGGACAACCCCTC...TTTGCAGGCGTGCACACACATGTGAGAAAGGACTGGCAAAGTAGAGGGACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CCA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCGGGCCTTTGGAGTGCTaGATGTCCTCCAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLCKYQQTGKAPALLTMGGPLEC*MSSRLK Trigger: CTTCAGCCTGGAGGACATCCAGCACTCCAAAGGCCC...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGTTAGAGATGTTTGTGAGCCACCACATGGTCCTAGGAATCAAACCTGGCCGACTGCAGGCTGCTaGCATCCATCTGCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVRDVCEPPHGPRNQTWPTAGC*HPSARC Trigger: GCATCGTGCAGATGGATGTCAGCAGCCTGCAGTCGG...CCAGGTTTGATTCCTAGGACCATGTGGTGGCTCACAAACATCTCTAACTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR TCA 90 bp | ATGCTGACAGGGGCACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCAAGCAGATGGGTTTGTaGACATCACAGGCCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MLTGAPESECSTEQVQEIKQMGL*TSQAAS Trigger: GGATGCGGCCTGTGATGTTCACAAACCCATCTGCTT...GATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGTTAGAGATGTTTGTGAGCCACCACATGGTCCTAGGAATCAAACCTGGTCCGGGCCTTTGGAGTaGTGGATGTCCTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVRDVCEPPHGPRNQTWSGPLE*WMSSRL Trigger: CAGCCTGGAGGACATCCAGCACTCCAAAGGCCCGGA...CCAGGTTTGATTCCTAGGACCATGTGGTGGCTCACAAACATCTCTAACTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CCA 90 bp | AAATCCCACCACAGGCATGGGGCCTGTTCTAAAGAGACAGAGAAGGCTGGGAAGGAAGGAGCCACATTATaGGTAGGAGCAACGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSHHRHGACSKETEKAGKEGATL*VGATSR Trigger: TCTGGACGTTGCTCCTACCCATAATGTGGCTCCTTC...CTTCCCAGCCTTCTCTGTCTCTTTAGAACAGGCCCCATGCCTGTGGTGGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR GCA 90 bp | AGCTCGGTACTGTCTCCTGGAAACAAGCACATGGGGAAGAGAAGGGGCCATCCTGATGCCGCAGAAAAATaGCTTGAGGTTGAATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVLSPGNKHMGKRRGHPDAAEK*LEVELW Trigger: CCACAATTCAACCTCAAGGCATTTTTCTGCGGCATC...AGGATGGCCCCTTCTCTTCCCCATGTGCTTGTTTCCAGGAGACAGTACCGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR GCA 90 bp | CCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGGATCTCGAACAGCTCTTaGTTTGCTCAGGTTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PESECSTEQVQEIPPQAWISNSS*FAQVPT Trigger: TGTAGGAACCTGAGCAAAGCAAGAGCTGTTCGAGAT...CCATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR GCA 90 bp | CCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGGGATGCCGCAGAAAAATaGCTTGAGGTTGAATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PESECSTEQVQEIPPQAWDAAEK*LEVELW Trigger: CCACAATTCAACCTCAAGGCATTTTTCTGCGGCATC...CCATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTGACAGGGGCACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCAGAAGCCAAGCAGATaGGTTTGTGAACATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLTGAPESECSTEQVQEIQKPSR*VCEHHR Trigger: CCTGTGATGTTCACAAACCCATCTGCTTGGCTTCTG...GATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR TCA 90 bp | TGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCAGATACTTTGAAACTTTTGCTTaGCTTCCTCTGCACCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKYQQTGKAPALLTMGRYFETFA*LPLHPG Trigger: TCCGGGGTGCAGAGGAAGTCAAGCAAAAGTTTCAAA...GTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAATCCCACCACAGGCATGGGGCCTGTTCTAAAGAGACAGAGAAGGCTGGCTGCACATCTCACTTaGCAACATCAACGGATTATG | + |
|
Preference number: 4 (lower is better) Translates to: TRNPTTGMGPVLKRQRRLAAHLT*QHQRIM Trigger: CATAATCCGTTGATGTTGTCAAGTGAGATGTGCAGC...CAGCCTTCTCTGTCTCTTTAGAACAGGCCCCATGCCTGTGGTGGGATTTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR TCA 90 bp | AGCTCGGTACTGTCTCCTGGAAACAAGCACATGGGGAAGAGAAGGGGCCATCCTGCTGTGGTGAACATATaGATCACATTTCTTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVLSPGNKHMGKRRGHPAVVNI*ITFLEK Trigger: CTTTTCAAGAAATGTGATTCATATGTTCACCACAGC...AGGATGGCCCCTTCTCTTCCCCATGTGCTTGTTTCCAGGAGACAGTACCGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR GCA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGGAACAGCTCTTGCTTTaGTCAGGTTCCTACACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNEAGVKVRNTASNRALREQLLL*SGSYTP Trigger: TGGCGTGTAGGAACCTGAGCAAAGCAAGAGCTGTTC...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CCA 90 bp | GGGCACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGGAATACAGACCCTTCTaGTTGAAATTCCTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHPRVSVPQNRYKKSHHREYRPF*LKFLFK Trigger: TTTGAACAGGAATTTCAACCAGAAGGGTCTGTATTC...CCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CCA 90 bp | AGAAATGAAGCCGGTGTAAAGGTGAGAAATACTGCTTCTAACAGAGCACTGCGGGAAGGAGCCACATTATaGGTAGGAGCAACGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNEAGVKVRNTASNRALREGATL*VGATSR Trigger: TCTGGACGTTGCTCCTACCCATAATGTGGCTCCTTC...CCGCAGTGCTCTGTTAGAAGCAGTATTTCTCACCTTTACACCGGCTTCATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CCA 90 bp | ATGCTGACAGGGGCACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCTGAGAGTAATGAAATaGACCGTGATAAAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLTGAPESECSTEQVQEILRVMK*TVIKPA Trigger: TGCTGGCTTTATCACGGTCCATTTCATTACTCTCAG...GATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR TCA 90 bp | CCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATGGGCTGTGGTGAACATATaGATCACATTTCTTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PESECSTEQVQEIPPQAWAVVNI*ITFLEK Trigger: CTTTTCAAGAAATGTGATTCATATGTTCACCACAGC...CCATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CCA 90 bp | TCCCACCACAGGCATGGGGCCTGTTCTAAAGAGACAGAGAAGGCTGGGAAGAAACGAATCAGAATAAAGTaGCCAAAGAGATTGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHHRHGACSKETEKAGKKRIRIK*PKRLVS Trigger: TGAAACCAATCTCTTTGGCCACTTTATTCTGATTCG...TTTCTTCCCAGCCTTCTCTGTCTCTTTAGAACAGGCCCCATGCCTGTGGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGCATTGCCCCTCCGTGCTGAGACTAAAAGAAGCTTCAGGCTGTACTGTGAATACAGACCCTTCTaGTTGAAATTCCTGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVALPLRAETKRSFRLYCEYRPF*LKFLFK Trigger: TTTGAACAGGAATTTCAACCAGAAGGGTCTGTATTC...ACAGTACAGCCTGAAGCTTCTTTTAGTCTCAGCACGGAGGGGCAATGCCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CCA 90 bp | TGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCAGATACCGAATCAGAATAAAGTaGCCAAAGAGATTGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKYQQTGKAPALLTMGRYRIRIK*PKRLVS Trigger: TGAAACCAATCTCTTTGGCCACTTTATTCTGATTCG...GTATCTGCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR GCA 90 bp | TCTATACGACTTTATTTATTTATTAAAAGCCTCCACGTGAGACAGCATACGAGGGAACAGCTCTTGCTTTaGTCAGGTTCCTACACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIRLYLFIKSLHVRQHTREQLLL*SGSYTP Trigger: TGGCGTGTAGGAACCTGAGCAAAGCAAGAGCTGTTC...CCTCGTATGCTGTCTCACGTGGAGGCTTTTAATAAATAAATAAAGTCGTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS TCA 90 bp | AGCCAGCATGAGGACTCGGATGCAGAAGCCAAGCAGATGGGTTTGTaGACATCACAGGCCGCATCCTGGCCTGTGATGCTGCACATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQHEDSDAEAKQMGL*TSQAASWPVMLHIS Trigger: TGAGATGTGCAGCATCACAGGCCAGGATGCGGCCTGTGATGTTCACAAACCCATCTGCTTGGCTTCTGCATCCGAGTCCTCATGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGTTCCAACAGGACACTGCTCTGGAGGGGTAAGTAGTTGGTCCCTCTACTATCTCGAACAGCTCTaGCTTTGCTCAGGTTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LAVPTGHCSGGVSSWSLYYLEQL*LCSGSY Trigger: GTAGGAACCTGAGCAAAGCAAGAGCTGTTCGAGATA...GTAGAGGGACCAACTACTTACCCCTCCAGAGCAGTGTCCTGTTGGAACTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CAA 90 bp | CTGACAGGGGCACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCATATCTCGAACAGCTCTaGCTTTGCTCAGGTTCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LTGAPESECSTEQVQEIPYLEQL*LCSGSY Trigger: GTAGGAACCTGAGCAAAGCAAGAGCTGTTCGAGATA...TGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGTTCCAACAGGACACTGCTCTGGAGGGGTAAGTAGTTGGTCCCTCTACTGCCTTGAGGTTGAATaGTGGATTAGGCAGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAVPTGHCSGGVSSWSLYCLEVE*WIRQDS Trigger: GGAATCCTGCCTAATCCACAATTCAACCTCAAGGCA...GTAGAGGGACCAACTACTTACCCCTCCAGAGCAGTGTCCTGTTGGAACTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CAA 90 bp | CACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAAATCCCACCACAGGCATTTAGCCTTCTTTGCATaGCGAGAGGACGTCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: HPRVSVPQNRYKKSHHRHLAFFA*REDVQM Trigger: CATCTGGACGTCCTCTCGCAATGCAAAGAAGGCTAA...ATGCCTGTGGTGGGATTTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS-3UTR CAA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCTTAGCCTTCTTTGCATaGCGAGAGGACGTCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLCKYQQTGKAPALLTMGLAFFA*REDVQM Trigger: CATCTGGACGTCCTCTCGCAATGCAAAGAAGGCTAA...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
||
| CDS-3UTR CAA 90 bp | TATATGCTGACAGGGGCACCCGAGAGTGAGTGTTCCACAGAACAGGTACAAGAATGCCTTGAGGTTGAATaGTGGATTAGGCAGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: YMLTGAPESECSTEQVQECLEVE*WIRQDS Trigger: GGAATCCTGCCTAATCCACAATTCAACCTCAAGGCA...TTCTTGTACCTGTTCTGTGGAACACTCACTCTCGGGTGCCCCTGTCAGCATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
||
| CDS TCA 90 bp | AGGAGAAAGCTGAGAGTAATGAAATGGACCGTGATAAAGCCAGCATaGGGACTCGGATGCAGAAGCCAAGCAGATGGGTTTGTGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: RRKLRVMKWTVIKPA*GLGCRSQADGFVNI Trigger: GATGTTCACAAACCCATCTGCTTGGCTTCTGCATCCGAGTCCTCATGCTGGCTTTATCACGGTCCATTTCATTACTCTCAGCTTTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| CDS-3UTR CAA 90 bp | GTTCTTTGCAAATACCAGCAAACTGGAAAAGCTCCTGCCTTGCTGACCATGGGCAAAAATGCCTTGAGGTaGAATTGTGGATTAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VLCKYQQTGKAPALLTMGKNALR*NCGLGR Trigger: CCTGCCTAATCCACAATTCAACCTCAAGGCATTTTT...GCCCATGGTCAGCAAGGCAGGAGCTTTTCCAGTTTGCTGGTATTTGCAAAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027989.13 |
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| CDS CCA 72 bp | GCCAGCATGAGGACTCGGATGCAGAAGCCAAGCAGATaGGTTTGTGAACATCACAGGCCGCATCCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASMRTRMQKPSR*VCEHHRPHPGL Trigger: CAGGCCAGGATGCGGCCTGTGATGTTCACAAACCCATCTGCTTGGCTTCTGCATCCGAGTCCTCATGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| CDS TCA 72 bp | GAGGACTCGGATGCAGAAGCCAAGCAGATGGGTTTGTaGACATCACAGGCCGCATCCTGGCCTGTGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: EDSDAEAKQMGL*TSQAASWPVML Trigger: CAGCATCACAGGCCAGGATGCGGCCTGTGATGTTCACAAACCCATCTGCTTGGCTTCTGCATCCGAGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| CDS GCA 72 bp | CTCCGGTTTTTGGTGGAAGAGCCACACCAGGGCCTCTaGTCCGTTGTACGGTGTCACAGTGAGCGCATTTAC | + |
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Preference number: 6 (lower is better) Translates to: LRFLVEEPHQGL*SVVRCHSERIY Trigger: GTAAATGCGCTCACTGTGACACCGTACAACGGAGCAGAGGCCCTGGTGTGGCTCTTCCACCAAAAACCGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027989.13 ENSMUST00000111353.4 |
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| CDS CCA 72 bp | GCGTATTTGGTCAGAGGATTAAGAGACTCCGGTTTTTaGTGGAAGAGCCACACCAGGGCCTCTGCTCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: AYLVRGLRDSGF*WKSHTRASAPL Trigger: CAACGGAGCAGAGGCCCTGGTGTGGCTCTTCCACCAAAAACCGGAGTCTCTTAATCCTCTGACCAAATACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027989.13 ENSMUST00000111353.4 |
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| CDS CAA 72 bp | CGCGTATTTGGTCAGAGGATTAAGAGACTCCGGTTTTaGGTGGAAGAGCCACACCAGGGCCTCTGCTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: RVFGQRIKRLRF*VEEPHQGLCSV Trigger: AACGGAGCAGAGGCCCTGGTGTGGCTCTTCCACCAAAAACCGGAGTCTCTTAATCCTCTGACCAAATACGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027989.13 ENSMUST00000111353.4 |
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| CDS CCA 72 bp | TATTTGGTCAGAGGATTAAGAGACTCCGGTTTTTGGTaGAAGAGCCACACCAGGGCCTCTGCTCCGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: YLVRGLRDSGFW*KSHTRASAPLY Trigger: GTACAACGGAGCAGAGGCCCTGGTGTGGCTCTTCCACCAAAAACCGGAGTCTCTTAATCCTCTGACCAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027989.13 ENSMUST00000111353.4 |
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| CDS TCA 72 bp | CTGAGAGTAATGAAATGGACCGTGATAAAGCCAGCATaGGGACTCGGATGCAGAAGCCAAGCAGATGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LRVMKWTVIKPA*GLGCRSQADGF Trigger: AAACCCATCTGCTTGGCTTCTGCATCCGAGTCCTCATGCTGGCTTTATCACGGTCCATTTCATTACTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111353.4 |
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| CDS TCA 72 bp | TCAGATATAAGTAGTCTAATCTTTGAAACTTTTGCTTaGCTTCCTCTGCACCCCGGACCACCGACTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SDISSLIFETFA*LPLHPGPPTAG Trigger: GCCTGCAGTCGGTGGTCCGGGGTGCAGAGGAAGTCAAGCAAAAGTTTCAAAGATTAGACTACTTATATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027989.13 ENSMUST00000111353.4 |
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