Pregenerated sensors for HSD17B6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025396Ensembl transcript IDs: ENSMUST00000026462.7, ENSMUST00000219183.2, ENSMUST00000219447.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTAGACCGCCACTTGAGTaGTTTCGGAAAGAGAGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: NTLIEREADFYELLPARVRPPLE*FRKESV Trigger: CACGCTCTCTTTCCGAAACCACTCAAGTGGCGGTCT...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTGAGACCAGATGTCTCTaGGGGTGGAGGGAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NTLIEREADFYELLPARVETRCL*GWRERK Trigger: TTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTC...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACAGACCGCCACTTGAGTaGTTTCGGAAAGAGAGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: QEKVVKIVINCIDLEWEHRPPLE*FRKESV Trigger: CACGCTCTCTTTCCGAAACCACTCAAGTGGCGGTCT...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACAGATGTCTCTGGGGGTaGAGGGAAAGGAAAAGACCG | + |
|
Preference number: 2 (lower is better) Translates to: QEKVVKIVINCIDLEWEHRCLWG*RERKRP Trigger: CGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCT...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACGAGACCAGATGTCTCTaGGGGTGGAGGGAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QEKVVKIVINCIDLEWEHETRCL*GWRERK Trigger: TTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTC...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| 3UTR CCA 72 bp | TGGGGGTGGAGGGAAAGGAAAAGACCGCCACTTGAGTaGTTTCGGAAAGAGAGCGTGTCTGCGCAGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WGWRERKRPPLE*FRKESVSAQIA Trigger: AGCTATCTGCGCAGACACGCTCTCTTTCCGAAACCACTCAAGTGGCGGTCTTTTCCTTTCCCTCCACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR GCA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACAGATGGCTCACCACCTaGCTCTCACGATACCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHRWLTT*LSRYQR Trigger: GCGTTGGTATCGTGAGAGGCAGGTGGTGAGCCATCT...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR GCA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTAGATGGCTCACCACCTaGCTCTCACGATACCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLIEREADFYELLPARVRWLTT*LSRYQR Trigger: GCGTTGGTATCGTGAGAGGCAGGTGGTGAGCCATCT...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACAAGACATACTTGTCTTaGAGATGGCTCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHKTYLS*RWLTTC Trigger: GCAGGTGGTGAGCCATCTCCAAGACAAGTATGTCTT...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR TCA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACCTGTCATTTCCGTCTTaGAGCTCCCAGGTTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHLSFPS*SSQVQL Trigger: TAATTGAACCTGGGAGCTTCAAGACGGAAATGACAG...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR TCA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACCAGGTTCAATTATGCTaGCTTTCACCCCGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHQVQLC*LSPRNL Trigger: AAGATTTCGGGGTGAAAGTCAGCATAATTGAACCTG...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR GCA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACGAATCCTCCAAACAATaGAACTCTTCCCAAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHESSKQ*NSSQST Trigger: AGTGCTTTGGGAAGAGTTGCATTGTTTGGAGGATTC...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACATGCTTATAGTCACCTaGGTCAAACCAATGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHMLIVT*VKPMRF Trigger: GAACCTCATTGGTTTGACCCAGGTGACTATAAGCAT...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR TCA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTCAGGTTCAATTATGCTaGCTTTCACCCCGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTLIEREADFYELLPARVQVQLC*LSPRNL Trigger: AAGATTTCGGGGTGAAAGTCAGCATAATTGAACCTG...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR GCA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTGAATCCTCCAAACAATaGAACTCTTCCCAAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NTLIEREADFYELLPARVESSKQ*NSSQST Trigger: AGTGCTTTGGGAAGAGTTGCATTGTTTGGAGGATTC...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACAAGACATACTTGTCTTaGAGATGGCTCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEKVVKIVINCIDLEWEHKTYLS*RWLTTC Trigger: GCAGGTGGTGAGCCATCTCCAAGACAAGTATGTCTT...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACCTGTCATTTCCGTCTTaGAGCTCCCAGGTTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: QEKVVKIVINCIDLEWEHLSFPS*SSQVQL Trigger: TAATTGAACCTGGGAGCTTCAAGACGGAAATGACAG...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACCAGGTTCAATTATGCTaGCTTTCACCCCGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEKVVKIVINCIDLEWEHQVQLC*LSPRNL Trigger: AAGATTTCGGGGTGAAAGTCAGCATAATTGAACCTG...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACGAATCCTCCAAACAATaGAACTCTTCCCAAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QEKVVKIVINCIDLEWEHESSKQ*NSSQST Trigger: AGTGCTTTGGGAAGAGTTGCATTGTTTGGAGGATTC...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACATGCTTATAGTCACCTaGGTCAAACCAATGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEKVVKIVINCIDLEWEHMLIVT*VKPMRF Trigger: GAACCTCATTGGTTTGACCCAGGTGACTATAAGCAT...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS GCA 90 bp | CAGCCAGCCGAGTACCGGGTGCGAGGATGCGTGGAGGTCAGGGCGTaGTCCATGCAGTCCGTGACTAGGCTCAGGTTCCTGCTACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPAEYRVRGCVEVRA*SMQSVTRLRFLLHF Trigger: GAAGTGTAGCAGGAACCTGAGCCTAGTCACGGACTGCATGGAGCACGCCCTGACCTCCACGCATCCTCGCACCCGGTACTCGGCTGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS TCA 90 bp | GGGTGCGAGGATGCGTGGAGGTCAGGGCGTGCTCCATGCAGTCCGTaGCTAGGCTCAGGTTCCTGCTACACTTCATCAACTCTCGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCEDAWRSGRAPCSP*LGSGSCYTSSTLVW Trigger: CCAAACGAGAGTTGATGAAGTGTAGCAGGAACCTGAGCCTAGTCACGGACTGCATGGAGCACGCCCTGACCTCCACGCATCCTCGCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACGAAGACATACTTGTCTaGGAGATGGCTCACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHEDILV*EMAHHL Trigger: CAGGTGGTGAGCCATCTCCAAGACAAGTATGTCTTC...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | TATAGAGTGAGACCAGATGTCTCTGGGGGTGGAGGGAAAGGAAAAGACCGCCACGTGATGAAGACATACTaGTCTTGGAGATGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: YRVRPDVSGGGGKGKDRHVMKTY*SWRWLT Trigger: GGTGAGCCATCTCCAAGACAAGTATGTCTTCATCAC...GTGGCGGTCTTTTCCTTTCCCTCCACCCCCAGAGACATCTGGTCTCACTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTGAAGACATACTTGTCTaGGAGATGGCTCACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTLIEREADFYELLPARVEDILV*EMAHHL Trigger: CAGGTGGTGAGCCATCTCCAAGACAAGTATGTCTTC...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTGTGATGAAGACATACTaGTCTTGGAGATGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: NTLIEREADFYELLPARVVMKTY*SWRWLT Trigger: GGTGAGCCATCTCCAAGACAAGTATGTCTTCATCAC...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS TCA 90 bp | AGAATCCTCCAAACAATGCAACTCTTCCCAAAGCACTGGAGACATTaGCGATCCTGCCCCGAGCCTTCTTTACCAGGAAAAGCATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RILQTMQLFPKHWRH*RSCPEPSLPGKACL Trigger: TAAGCATGCTTTTCCTGGTAAAGAAGGCTCGGGGCAGGATCGTCAATGTCTCCAGTGCTTTGGGAAGAGTTGCATTGTTTGGAGGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | AACACCTTGATTGAGAGAGAGGCAGACTTCTATGAGTTGCTGCCAGCCAGGGTTTCTGTCATTTCCGTCTaGAAGCTCCCAGGTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: NTLIEREADFYELLPARVSVISV*KLPGSI Trigger: AATTGAACCTGGGAGCTTCAAGACGGAAATGACAGA...AACCCTGGCTGGCAGCAACTCATAGAAGTCTGCCTCTCTCTCAATCAAGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACGAAGACATACTTGTCTaGGAGATGGCTCACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QEKVVKIVINCIDLEWEHEDILV*EMAHHL Trigger: CAGGTGGTGAGCCATCTCCAAGACAAGTATGTCTTC...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAAAGTGGTTAAGATAGTAATAAATTGTATAGACCTGGAATGGGAACACACCAATGAGGTTCACTaGAAAGATAGGCATGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QEKVVKIVINCIDLEWEHTNEVH*KDRHVV Trigger: GACTACATGCCTATCTTTCAAGTGAACCTCATTGGT...GTGTTCCCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS GCA 72 bp | GAGTACCGGGTGCGAGGATGCGTGGAGGTCAGGGCGTaGTCCATGCAGTCCGTGACTAGGCTCAGGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EYRVRGCVEVRA*SMQSVTRLRFL Trigger: CAGGAACCTGAGCCTAGTCACGGACTGCATGGAGCACGCCCTGACCTCCACGCATCCTCGCACCCGGTACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS TCA 72 bp | GATGCGTGGAGGTCAGGGCGTGCTCCATGCAGTCCGTaGCTAGGCTCAGGTTCCTGCTACACTTCATCAACT | + |
|
Preference number: 6 (lower is better) Translates to: DAWRSGRAPCSP*LGSGSCYTSST Trigger: AGTTGATGAAGTGTAGCAGGAACCTGAGCCTAGTCACGGACTGCATGGAGCACGCCCTGACCTCCACGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS CAA 72 bp | CCAAACAATGCAACTCTTCCCAAAGCACTGGAGACATaGACGATCCTGCCCCGAGCCTTCTTTACCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PNNATLPKALET*TILPRAFFTRK Trigger: TTTCCTGGTAAAGAAGGCTCGGGGCAGGATCGTCAATGTCTCCAGTGCTTTGGGAAGAGTTGCATTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS TCA 72 bp | CAAACAATGCAACTCTTCCCAAAGCACTGGAGACATTaGCGATCCTGCCCCGAGCCTTCTTTACCAGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: QTMQLFPKHWRH*RSCPEPSLPGK Trigger: TTTTCCTGGTAAAGAAGGCTCGGGGCAGGATCGTCAATGTCTCCAGTGCTTTGGGAAGAGTTGCATTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS CCA 72 bp | GCCTTAGCACATCTGAAAATGCCTCAACCCCATACTTaGAGCAACTGTAGAATCCTCCAAACAATGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: ALAHLKMPQPHT*SNCRILQTMQL Trigger: GAGTTGCATTGTTTGGAGGATTCTACAGTTGCTCCAAGTATGGGGTTGAGGCATTTTCAGATGTGCTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS CAA 72 bp | GCTTATAGTCACCTGGGTCAAACCAATGAGGTTCACTaGAAAGATAGGCATGTAGTCCTCTGGTCTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: AYSHLGQTNEVH*KDRHVVLWSVP Trigger: TGGTACAGACCAGAGGACTACATGCCTATCTTTCAAGTGAACCTCATTGGTTTGACCCAGGTGACTATAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS CAA 72 bp | CTCTCAATGGTTAACTCTGCATCTGTCATTTCCGTCTaGAAGCTCCCAGGTTCAATTATGCTGACTTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LSMVNSASVISV*KLPGSIMLTFT Trigger: GGTGAAAGTCAGCATAATTGAACCTGGGAGCTTCAAGACGGAAATGACAGATGCAGAGTTAACCATTGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||
| CDS CAA 90 bp | GAAAAGCATGCTTATAGTCACCTGGGTCAAACCAATGAGGTTCACTaGAAAGATAGGCATGTAGTCCTCTGGTCTGTACCATTCAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: EKHAYSHLGQTNEVH*KDRHVVLWSVPFNV Trigger: TACATTGAATGGTACAGACCAGAGGACTACATGCCTATCTTTCAAGTGAACCTCATTGGTTTGACCCAGGTGACTATAAGCATGCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026462.7 ENSMUST00000219183.2 ENSMUST00000219447.2 |
||