Pregenerated sensors for HSD17B4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024507Ensembl transcript IDs: ENSMUST00000025385.7
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGATTCCAGTCTCCGCTaGGGCGGTACAGCGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDDSSLR*GGTARP Trigger: AGGCCGCGCTGTACCGCCTCAGCGGAGACTGGAATC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCCTTTGCGGGGCCTTaGTACACCTCCCCTGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPFAGP*YTSPEP Trigger: CGGCTCAGGGGAGGTGTACCAAGGCCCCGCAAAGGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGCTGCAGGTGCCGCGTaGCTGGTACGGTTTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDAAGAA*LVRFGE Trigger: CTCACCAAACCGTACCAGTCACGCGGCACCTGCAGC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCGCGGCCTGATTCAGTaGGGTGGCATCTCTCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDRGLIQ*GGISQY Trigger: GTACTGAGAGATGCCACCTCACTGAATCAGGCCGCG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCTTCAGCCTGCCACTaGAGAAGGCCTTCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPSACH*RRPSVG Trigger: ACCCACAGAAGGCCTTCTTCAGTGGCAGGCTGAAGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATCAGCAGAGCCCTTTaGGGGGCCTTGGTACACCTC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDISRAL*GALVHL Trigger: GAGGTGTACCAAGGCCCCGCAAAGGGCTCTGCTGAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTTTGGATTTTTGACTaGCGCTCCCACTCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLWIFD*RSHSEG Trigger: GCCCTCGGAGTGGGAGCGTCAGTCAAAAATCCAAAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCATATGGTCCCATGCTaGCCGGGTCACTTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDHMVPC*PGHLEG Trigger: TCCTTCCAAGTGACCCGGGCAGCATGGGACCATATG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTCCGTGACCCAGCGTTaGGGGCAATGGTGTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDSVTQR*GQWCCN Trigger: ATTGCAACACCATTGCCCCCAACGCTGGGTCACGGA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGCTTGCTGGCATTGCTaGAGTCACAGATCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDACWHC*SHRSSP Trigger: GGGAGAAGATCTGTGACTTCAGCAATGCCAGCAAGC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCACCTGTTGATTCTTaGATGGTCTGCGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPPVDS*MVCGLL Trigger: CAGCAAGCCGCAGACCATTCAAGAATCAACAGGTGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACACTTCTGAGCGACAATaGCTCCGAAGGTGGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDTSERQ*LRRWAN Trigger: GTTTGCCCACCTTCGGAGTCATTGTCGCTCAGAAGT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTGCCACAACCTTGTCTaGAGCAGAGGAGCCTTTACC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDCHNLV*SRGAFT Trigger: GGTAAAGGCTCCTCTGCTGCAGACAAGGTTGTGGCA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTTCATATGGTCCCATaGTGCCCGGGTCACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLHMVP*CPGHLE Trigger: TTCCAAGTGACCCGGGCAGCATGGGACCATATGAAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAGGGGCCACATACTCTaGCTTCAGGGCTTCAACAAG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDRGHIL*LQGFNK Trigger: CTTGTTGAAGCCCTGAAGCCAGAGTATGTGGCCCCT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTTTGCAAAGTTGAATaGCAGCCCAGGAACCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLCKVE*QPRNLC Trigger: GCAGAGGTTCCTGGGCTGTCATTCAACTTTGCAAAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGAGCCTTTGCAAAGTTaGATGACAGCCCAGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDEPLQS*MTAQEP Trigger: AGGTTCCTGGGCTGTCATTCAACTTTGCAAAGGCTC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAAGTACTGCTCCCCGTaGAGAGCCTTTGCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDKYCSP*RAFAKL Trigger: CAACTTTGCAAAGGCTCTTCACGGGGAGCAGTACTT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCACAACGTCTATTCTaGCAAATGTGTCCAGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPQRLF*QMCPVP Trigger: CGGCACTGGACACATTTGGCAGAATAGACGTTGTGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTGCAGAGACCCAGAATaGCCAGCTTTGCAGCACTAT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDCRDPE*PALQHY Trigger: ATAGTGCTGCAAAGCTGGGCATTCTGGGTCTCTGCA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAATGGTCCACTTGGCTaGAACAGTCCCACCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDNGPLG*NSPTFR Trigger: ACGAAAGGTGGGACTGTTGCAGCCAAGTGGACCATT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTCCTCACAGCTCTCATaGCAAAGCCAAAGCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDSSQLS*QSQSTR Trigger: TCTGGTGCTTTGGCTTTGCCATGAGAGCTGTGAGGA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAACACAAGAGCACTCTaGAGCTCTCCACCCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDNTRAL*SSPPSE Trigger: TTCAGAGGGTGGAGAGCTCCAGAGTGCTCTTGTGTT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGGATTCCAGCATTGTTaGCCACAACGTCTATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDGFQHC*PQRLFC Trigger: GCAGAATAGACGTTGTGGTCAACAATGCTGGAATCC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGACTATACCACCTGTTaGTTCTTGAATGGTCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDDYTTC*FLNGLR Trigger: CCGCAGACCATTCAAGAATCAACAGGTGGTATAGTC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAATCCTTTGGATTTTTaGCTGACGCTCCCACTCCGA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDNPLDF*LTLPLR Trigger: TCGGAGTGGGAGCGTCAGTCAAAAATCCAAAGGATT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCAGAATGCCCAGCTTTaGAGCACTATAATTCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDQNAQL*STIIRL Trigger: CAGGCGAATTATAGTGCTGCAAAGCTGGGCATTCTG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTGTTGATTCTTGAATaGTCTGCGGCTTGCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLLILE*SAACWH Trigger: ATGCCAGCAAGCCGCAGACCATTCAAGAATCAACAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCTGATTCAGTGAGGTaGCATCTCTCAGTACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPDSVR*HLSVQH Trigger: ATGCTGTACTGAGAGATGCCACCTCACTGAATCAGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACGCAATGGTGTTGCAATaGATGTTGTTCTTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDAMVLQ*MLFFLP Trigger: AGGCAGGAAGAACAACATTCATTGCAACACCATTGC...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCAGCTACAGCTGCTTTaGGTTTTTCTGATGTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDQLQLL*VFLMSV Trigger: AACGGACATCAGAAAAACTCAAAGCAGCTGTAGCTG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCGTACGCATTTGAAATaGCAACATCTCCAGTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDRTHLK*QHLQSR Trigger: ACGAGACTGGAGATGTTGTCATTTCAAATGCGTACG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTGTCCTGGATACACTaGTTTGGCAAAACGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLSWIH*FGKTNL Trigger: AAGGTTCGTTTTGCCAAACCAGTGTATCCAGGACAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTAAGTCGTTCACAATaGCTAATGCTCCTCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLSRSQ*LMLLFL Trigger: CAGAAAGAGGAGCATTAGTCATTGTGAACGACTTAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATCCACGTACGCATTTaGAATGACAACATCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDIHVRI*NDNISS Trigger: ACTGGAGATGTTGTCATTTCAAATGCGTACGTGGAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATCATCTGTAGTTTCTaGCTCAGCATGATGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDIICSF*LSMMFP Trigger: AGGGAACATCATGCTGAGCCAGAAACTACAGATGAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTGCTTTGAGTTTTTCTaGTGTCCGTTTTCCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDCFEFF*CPFSTK Trigger: TTTGGTGGAAAACGGACATCAGAAAAACTCAAAGCA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAATGAAGGAAGTTTATaGCCAACAGCACCAACGAAT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDNEGSL*PTAPTN Trigger: ATTCGTTGGTGCTGTTGGCCATAAACTTCCTTCATT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATAGTCCATGTAATATaGGCTTCTCAAAACCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDIVHVI*ASQNRQ Trigger: TTGCCGGTTTTGAGAAGCCCATATTACATGGACTAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCAGTCTCGTGGACCTTaGTTTGAAAATGAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDQSRGP*FENEFC Trigger: ACAGAATTCATTTTCAAACCAAGGTCCACGAGACTG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATATATTCCAGAAGCTaGGGAAGTCATAAGGATTCT | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDIYSRS*GSHKDS Trigger: AGAATCCTTATGACTTCCTCAGCTTCTGGAATATAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR TCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATACGAAGAAGAAAATaGAGGAAGTTTATGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDIRRRK*RKFMAN Trigger: GTTGGCCATAAACTTCCTTCATTTTCTTCTTCGTAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR GCA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTCATTATCTGCAAACTaGTGTAAAACATGCCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDSLSAN*CKTCLA Trigger: TGCAAGGCATGTTTTACAGCAGTTTGCAGATAATGA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 90 bp | GGTCACATCAGCAGAGCCCTTTGCGGGGCCTTGGTACACCTCCCCTaGGCCGCTCTTCAGGTCAATGGTCCACTTGGCTGCAACAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GHISRALCGALVHLP*AALQVNGPLGCNSP Trigger: GGGACTGTTGCAGCCAAGTGGACCATTGACCTGAAGAGCGGCTCAGGGGAGGTGTACCAAGGCCCCGCAAAGGGCTCTGCTGATGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 90 bp | AGTTGTCCCTCACTGCCTCGGGAGTCATGGGCTGATTCCGCTTTCTaGCGATGGCGCCCAGGGTCCTCTCCCAGCGCAATTTTCCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SCPSLPRESWADSAF*RWRPGSSPSAIFQS Trigger: GGATTGGAAAATTGCGCTGGGAGAGGACCCTGGGCGCCATCGTCAGAAAGCGGAATCAGCCCATGACTCCCGAGGCAGTGAGGGACAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 90 bp | CGCTCGCAAAGTCCGGGTCAATGTGTAGAGGATTCCAGTCTCCGCTaGGGCGGTACAGCGCGGCCTGATTCAGTGAGGTGGCATCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQSPGQCVEDSSLR*GGTARPDSVRWHLS Trigger: TGAGAGATGCCACCTCACTGAATCAGGCCGCGCTGTACCGCCTCAGCGGAGACTGGAATCCTCTACACATTGACCCGGACTTTGCGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS GCA 90 bp | GCTGGCATTGCTGAAGTCACAGATCTTCTCCCAGTTGTCCCTCACTaGCTCGGGAGTCATGGGCTGATTCCGCTTTCTGACGATGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGIAEVTDLLPVVPH*LGSHGLIPLSDDGA Trigger: GGCGCCATCGTCAGAAAGCGGAATCAGCCCATGACTCCCGAGGCAGTGAGGGACAACTGGGAGAAGATCTGTGACTTCAGCAATGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS TCA 90 bp | GACAGCCCAGGAACCTCTGCCAGCCCTCCATTCATCATGGACTTCTaGGCGACAATGACTCCGAAGGTGGGCAAACAGGAGAAGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSPGTSASPPFIMDF*ATMTPKVGKQEKSA Trigger: TGCTGACTTCTCCTGTTTGCCCACCTTCGGAGTCATTGTCGCTCAGAAGTCCATGATGAATGGAGGGCTGGCAGAGGTTCCTGGGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 90 bp | ACAGCTCTCATGGCAAAGCCAAAGCACCAGAGGGGCCACATACTCTaGCTTCAGGGCTTCAACAAGATCTTCCGGCAACACAGTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TALMAKPKHQRGHIL*LQGFNKIFRQHSLR Trigger: ACGGAGACTGTGTTGCCGGAAGATCTTGTTGAAGCCCTGAAGCCAGAGTATGTGGCCCCTCTGGTGCTTTGGCTTTGCCATGAGAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS TCA 90 bp | GAACCTCTGCCAGCCCTCCATTCATCATGGACTTCTGAGCGACAATaGCTCCGAAGGTGGGCAAACAGGAGAAGTCAGCACTGCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EPLPALHSSWTSERQ*LRRWANRRSQHCLH Trigger: ATGAAGGCAGTGCTGACTTCTCCTGTTTGCCCACCTTCGGAGTCATTGTCGCTCAGAAGTCCATGATGAATGGAGGGCTGGCAGAGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 90 bp | CCAAACACAAGAGCACTCTGGAGCTCTCCACCCTCTGAAGGTGTCTaGGTTGAAACTCCAGATGCAGGCACGAGATCCACGTACGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PNTRALWSSPPSEGV*VETPDAGTRSTYAF Trigger: AAATGCGTACGTGGATCTCGTGCCTGCATCTGGAGTTTCAACCCAGACACCTTCAGAGGGTGGAGAGCTCCAGAGTGCTCTTGTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCATCAGCAGAGCCCTTaGCGGGGCCTTGGTACACCT | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDHQQSP*RGLGTP Trigger: AGGTGTACCAAGGCCCCGCAAAGGGCTCTGCTGATG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCAGATCTTCTCCCAGTaGTCCCTCACTGCCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDQIFSQ*SLTASG Trigger: TCCCGAGGCAGTGAGGGACAACTGGGAGAAGATCTG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 90 bp | AAAATGAAGGAAGTTTATGGCCAACAGCACCAACGAATCCTGACGTaGCTGCAGGTGCCGCGTGACTGGTACGGTTTGGTGAGATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KMKEVYGQQHQRILT*LQVPRDWYGLVRFL Trigger: AAGGAATCTCACCAAACCGTACCAGTCACGCGGCACCTGCAGCCACGTCAGGATTCGTTGGTGCTGTTGGCCATAAACTTCCTTCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CCA 90 bp | ATACTCTGCAGCTCCGTATACGAAGAAGAAAATGAAGGAAGTTTATaGCCAACAGCACCAACGAATCCTGACGTGGCTGCAGGTGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ILCSSVYEEENEGSL*PTAPTNPDVAAGAA Trigger: CGCGGCACCTGCAGCCACGTCAGGATTCGTTGGTGCTGTTGGCCATAAACTTCCTTCATTTTCTTCTTCGTATACGGAGCTGCAGAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACATCTCTGCCACAACCTaGTCTGCAGCAGAGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDISATT*SAAEEP Trigger: AGGCTCCTCTGCTGCAGACAAGGTTGTGGCAGAGAT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS TCA 90 bp | CACTTATCCTGGAGAAGGAACGGTCCCTCAGGATTCCAGCATTGTTaGCCACAACGTCTATTCTGCCAAATGTGTCCAGTGCCGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLSWRRNGPSGFQHC*PQRLFCQMCPVPSS Trigger: TGAAGACGGCACTGGACACATTTGGCAGAATAGACGTTGTGGTCAACAATGCTGGAATCCTGAGGGACCGTTCCTTCTCCAGGATAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 90 bp | GTGCCGTCTTCACAAGCTTCTCGCCTGCTTCAACTGAATCGTAATTaGCCACTGCTTTTCCGCCTTTCCTTCTTATCTCTGCCACAACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPSSQASRLLQLNRN*PLLFRLSFLSLPQP Trigger: AGGTTGTGGCAGAGATAAGAAGGAAAGGCGGAAAAGCAGTGGCCAATTACGATTCAGTTGAAGCAGGCGAGAAGCTTGTGAAGACGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACTGCGGCTTGCTGGCATaGCTGAAGTCACAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDCGLLA*LKSQIF Trigger: GAAGATCTGTGACTTCAGCAATGCCAGCAAGCCGCA...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTGAAGGTGTCTGGGTaGAAACTCCAGATGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLKVSG*KLQMQA Trigger: TGCCTGCATCTGGAGTTTCAACCCAGACACCTTCAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCTTTACCAATTCCCTaGAAGTCCCCTCCTAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPLPIP*KSPPKS Trigger: CGACTTAGGAGGGGACTTCAAGGGAATTGGTAAAGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAGAGCCTTTGCAAAGTaGAATGACAGCCCAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDRAFAK*NDSPGT Trigger: GGTTCCTGGGCTGTCATTCAACTTTGCAAAGGCTCT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 90 bp | AAATGTGTCCAGTGCCGTCTTCACAAGCTTCTCGCCTGCTTCAACTaGATCGTAATTGGCCACTGCTTTTCCGCCTTTCCTTCTTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KCVQCRLHKLLACFN*IVIGHCFSAFPSYL Trigger: GAGATAAGAAGGAAAGGCGGAAAAGCAGTGGCCAATTACGATTCAGTTGAAGCAGGCGAGAAGCTTGTGAAGACGGCACTGGACACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCGACTATACCACCTGTaGATTCTTGAATGGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDRLYHL*ILEWSA Trigger: CGCAGACCATTCAAGAATCAACAGGTGGTATAGTCG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACAGGATTCCAGCATTGTaGACCACAACGTCTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDRIPAL*TTTSIL Trigger: CAGAATAGACGTTGTGGTCAACAATGCTGGAATCCT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCTCAGGATTCCAGCATaGTTGACCACAACGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDLRIPA*LTTTSI Trigger: AATAGACGTTGTGGTCAACAATGCTGGAATCCTGAG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACACAGCTACAGCTGCTTaGAGTTTTTCTGATGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDTATAA*SFSDVR Trigger: ACGGACATCAGAAAAACTCAAAGCAGCTGTAGCTGT...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS-3UTR CAA 90 bp | TGTGGATCGCAGAAGGCTGCGGCTCAGCTGGGTAGACAGTATTTAATTATTGACCCTGGATACACTGGTTaGGCAAAACGAACCTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: CGSQKAAAQLGRQYLIIDPGYTG*AKRTLI Trigger: GATTAAGGTTCGTTTTGCCAAACCAGTGTATCCAGG...GTCAATAATTAAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 90 bp | AAACATGCCTTGCAGAAAATCCAAAGGTACATAGTCCATGTAATATaGGCTTCTCAAAACCGGCAACGCTCGCAAAGTCCGGGTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KHALQKIQRYIVHVI*ASQNRQRSQSPGQC Trigger: ACATTGACCCGGACTTTGCGAGCGTTGCCGGTTTTGAGAAGCCCATATTACATGGACTATGTACCTTTGGATTTTCTGCAAGGCATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | GGGCGTAAGCTCGGCCCAATCCTCCCCCGGCGCCGGTaGCCAAGACCACACGCCCGTCGAACCTCAGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRKLGPILPRRR*PRPHARRTSAA Trigger: CGCCGCTGAGGTTCGACGGGCGTGTGGTCTTGGTCACCGGCGCCGGGGGAGGATTGGGCCGAGCTTACGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | AGTCCGGGTCAATGTGTAGAGGATTCCAGTCTCCGCTaGGGCGGTACAGCGCGGCCTGATTCAGTGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGQCVEDSSLR*GGTARPDSVRW Trigger: CCACCTCACTGAATCAGGCCGCGCTGTACCGCCTCAGCGGAGACTGGAATCCTCTACACATTGACCCGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | GGATTCCAGTCTCCGCTGAGGCGGTACAGCGCGGCCTaGTTCAGTGAGGTGGCATCTCTCAGTACAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GFQSPLRRYSAA*FSEVASLSTAS Trigger: AGATGCTGTACTGAGAGATGCCACCTCACTGAATCAGGCCGCGCTGTACCGCCTCAGCGGAGACTGGAATCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 72 bp | ATGATGGTCACATCAGCAGAGCCCTTTGCGGGGCCTTaGTACACCTCCCCTGAGCCGCTCTTCAGGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: MMVTSAEPFAGP*YTSPEPLFRSM Trigger: CATTGACCTGAAGAGCGGCTCAGGGGAGGTGTACCAAGGCCCCGCAAAGGGCTCTGCTGATGTGACCATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 72 bp | GAAGTTTATGGCCAACAGCACCAACGAATCCTGACGTaGCTGCAGGTGCCGCGTGACTGGTACGGTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EVYGQQHQRILT*LQVPRDWYGLV Trigger: CACCAAACCGTACCAGTCACGCGGCACCTGCAGCCACGTCAGGATTCGTTGGTGCTGTTGGCCATAAACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 72 bp | AGAGCACTCTGGAGCTCTCCACCCTCTGAAGGTGTCTaGGTTGAAACTCCAGATGCAGGCACGAGATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RALWSSPPSEGV*VETPDAGTRST Trigger: CGTGGATCTCGTGCCTGCATCTGGAGTTTCAACCCAGACACCTTCAGAGGGTGGAGAGCTCCAGAGTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CAA 72 bp | CACTCTGGAGCTCTCCACCCTCTGAAGGTGTCTGGGTaGAAACTCCAGATGCAGGCACGAGATCCACGTACG | + |
|
Preference number: 6 (lower is better) Translates to: HSGALHPLKVSG*KLQMQARDPRT Trigger: CGTACGTGGATCTCGTGCCTGCATCTGGAGTTTCAACCCAGACACCTTCAGAGGGTGGAGAGCTCCAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | GCACCAACGAATCCTGACGTGGCTGCAGGTGCCGCGTaGCTGGTACGGTTTGGTGAGATTCCTTCTGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: APTNPDVAAGAA*LVRFGEIPSES Trigger: AGATTCAGAAGGAATCTCACCAAACCGTACCAGTCACGCGGCACCTGCAGCCACGTCAGGATTCGTTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | GGAACCTCTGCCAGCCCTCCATTCATCATGGACTTCTaGGCGACAATGACTCCGAAGGTGGGCAAACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTSASPPFIMDF*ATMTPKVGKQE Trigger: CTCCTGTTTGCCCACCTTCGGAGTCATTGTCGCTCAGAAGTCCATGATGAATGGAGGGCTGGCAGAGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS GCA 72 bp | GCTGAAGTCACAGATCTTCTCCCAGTTGTCCCTCACTaGCTCGGGAGTCATGGGCTGATTCCGCTTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AEVTDLLPVVPH*LGSHGLIPLSD Trigger: GTCAGAAAGCGGAATCAGCCCATGACTCCCGAGGCAGTGAGGGACAACTGGGAGAAGATCTGTGACTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CAA 72 bp | ACCTCCCCTGAGCCGCTCTTCAGGTCAATGGTCCACTaGGCTGCAACAGTCCCACCTTTCGTGATATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TSPEPLFRSMVH*AATVPPFVICH Trigger: ATGGCATATCACGAAAGGTGGGACTGTTGCAGCCAAGTGGACCATTGACCTGAAGAGCGGCTCAGGGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | CCAGCCCTCCATTCATCATGGACTTCTGAGCGACAATaGCTCCGAAGGTGGGCAAACAGGAGAAGTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PALHSSWTSERQ*LRRWANRRSQH Trigger: GTGCTGACTTCTCCTGTTTGCCCACCTTCGGAGTCATTGTCGCTCAGAAGTCCATGATGAATGGAGGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CCA 72 bp | ATGGCAAAGCCAAAGCACCAGAGGGGCCACATACTCTaGCTTCAGGGCTTCAACAAGATCTTCCGGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: MAKPKHQRGHIL*LQGFNKIFRQH Trigger: GTGTTGCCGGAAGATCTTGTTGAAGCCCTGAAGCCAGAGTATGTGGCCCCTCTGGTGCTTTGGCTTTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CAA 90 bp | CCTTGGTACACCTCCCCTGAGCCGCTCTTCAGGTCAATGGTCCACTaGGCTGCAACAGTCCCACCTTTCGTGATATGCCATTCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: PWYTSPEPLFRSMVH*AATVPPFVICHSNT Trigger: TGTGTTTGAATGGCATATCACGAAAGGTGGGACTGTTGCAGCCAAGTGGACCATTGACCTGAAGAGCGGCTCAGGGGAGGTGTACCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | AACAAGATCTTCCGGCAACACAGTCTCCGTCATCCGTaGCCCAGCGTTGGGGGCAATGGTGTTGCAATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: NKIFRQHSLRHP*PSVGGNGVAMN Trigger: ATTCATTGCAACACCATTGCCCCCAACGCTGGGTCACGGATGACGGAGACTGTGTTGCCGGAAGATCTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CAA 90 bp | ACACAAGAGCACTCTGGAGCTCTCCACCCTCTGAAGGTGTCTGGGTaGAAACTCCAGATGCAGGCACGAGATCCACGTACGCATTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TQEHSGALHPLKVSG*KLQMQARDPRTHLK Trigger: TTTCAAATGCGTACGTGGATCTCGTGCCTGCATCTGGAGTTTCAACCCAGACACCTTCAGAGGGTGGAGAGCTCCAGAGTGCTCTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS TCA 72 bp | CAGTGCCGTCTTCACAAGCTTCTCGCCTGCTTCAACTaGATCGTAATTGGCCACTGCTTTTCCGCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QCRLHKLLACFN*IVIGHCFSAFP Trigger: AGGAAAGGCGGAAAAGCAGTGGCCAATTACGATTCAGTTGAAGCAGGCGAGAAGCTTGTGAAGACGGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CAA 72 bp | AGCCTGCCACTGAAGAAGGCCTTCTGTGGGTCAAGCTaGCCGAAGACCACTTCCATAAAATCCTCATCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLPLKKAFCGSS*PKTTSIKSSSE Trigger: TTCCGATGAGGATTTTATGGAAGTGGTCTTCGGCAAGCTTGACCCACAGAAGGCCTTCTTCAGTGGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS GCA 72 bp | TCCGCCTTTCCTTCTTATCTCTGCCACAACCTTGTCTaGAGCAGAGGAGCCTTTACCAATTCCCTTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAFPSYLCHNLV*SRGAFTNSLEV Trigger: GACTTCAAGGGAATTGGTAAAGGCTCCTCTGCTGCAGACAAGGTTGTGGCAGAGATAAGAAGGAAAGGCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CAA 90 bp | CAACGAATCCTGACGTGGCTGCAGGTGCCGCGTGACTGGTACGGTTaGGTGAGATTCCTTCTGAATCTACCTTATGTAAAACTTCGACTA | + |
|
Preference number: 6 (lower is better) Translates to: QRILTWLQVPRDWYG*VRFLLNLPYVKLRL Trigger: TAGTCGAAGTTTTACATAAGGTAGATTCAGAAGGAATCTCACCAAACCGTACCAGTCACGCGGCACCTGCAGCCACGTCAGGATTCGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CCA 72 bp | TCACAAGCTTCTCGCCTGCTTCAACTGAATCGTAATTaGCCACTGCTTTTCCGCCTTTCCTTCTTATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQASRLLQLNRN*PLLFRLSFLSL Trigger: CAGAGATAAGAAGGAAAGGCGGAAAAGCAGTGGCCAATTACGATTCAGTTGAAGCAGGCGAGAAGCTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CCA 72 bp | AGCTCCGTATACGAAGAAGAAAATGAAGGAAGTTTATaGCCAACAGCACCAACGAATCCTGACGTGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSVYEEENEGSL*PTAPTNPDVAA Trigger: TGCAGCCACGTCAGGATTCGTTGGTGCTGTTGGCCATAAACTTCCTTCATTTTCTTCTTCGTATACGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS TCA 72 bp | CAATGGTCCACTTGGCTGCAACAGTCCCACCTTTCGTaGTATGCCATTCAAACACAGCATTCGCTTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QWSTWLQQSHLS*YAIQTQHSLSL Trigger: TAAAGAAAGCGAATGCTGTGTTTGAATGGCATATCACGAAAGGTGGGACTGTTGCAGCCAAGTGGACCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
||
| CDS CCA 72 bp | TTGCAGAAAATCCAAAGGTACATAGTCCATGTAATATaGGCTTCTCAAAACCGGCAACGCTCGCAAAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LQKIQRYIVHVI*ASQNRQRSQSP Trigger: CGGACTTTGCGAGCGTTGCCGGTTTTGAGAAGCCCATATTACATGGACTATGTACCTTTGGATTTTCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS TCA 72 bp | CATAATACTCTGCAGCTCCGTATACGAAGAAGAAAATaGAGGAAGTTTATGGCCAACAGCACCAACGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HNTLQLRIRRRK*RKFMANSTNES Trigger: GGATTCGTTGGTGCTGTTGGCCATAAACTTCCTTCATTTTCTTCTTCGTATACGGAGCTGCAGAGTATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CAA 72 bp | AATCTACCTTATGTAAAACTTCGACTATACCACCTGTaGATTCTTGAATGGTCTGCGGCTTGCTGGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: NLPYVKLRLYHL*ILEWSAACWHC Trigger: GCAATGCCAGCAAGCCGCAGACCATTCAAGAATCAACAGGTGGTATAGTCGAAGTTTTACATAAGGTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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| CDS CAA 72 bp | GGATACACTGGTTTGGCAAAACGAACCTTAATCGCCTaGAATCTTGATACATCATTATCTGCAAACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GYTGLAKRTLIA*NLDTSLSANCC Trigger: ACAGCAGTTTGCAGATAATGATGTATCAAGATTCAAGGCGATTAAGGTTCGTTTTGCCAAACCAGTGTATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025385.7 |
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