Pregenerated sensors for HSD17B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033122Ensembl transcript IDs: ENSMUST00000039832.7, ENSMUST00000166224.8, ENSMUST00000221513.2, ENSMUST00000222783.2, ENSMUST00000222810.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTCAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCAATaGAGAGCTCTGGATGTCCTTCTCAACTCTCCCTCCAGCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: LSGGQGSPPSGHYYQ*RALDVLLNSPSSPT Trigger: GGTGGGGCTGGAGGGAGAGTTGAGAAGGACATCCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| 3UTR GCA 90 bp | CCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCACACTGTaGCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: PQLFLRSLNSNNCTL*LWHGRLPFRRSRVT Trigger: GGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| 3UTR GCA 90 bp | GCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTaGACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: AFTPQLFLRSLNSNN*TLCLWHGRLPFRRS Trigger: TGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| 3UTR-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACTGCACACTGTGCCTGTaGCATGGAAGGCTTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNCTLCL*HGRLPP Trigger: TGGGGGAAGCCTTCCATGCCACAGGCACAGTGTGCA...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039832.7 |
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| 3UTR CCA 72 bp | TCTGAATTCCAACAACTGCACACTGTGCCTGTGGCATaGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: SEFQQLHTVPVA*KAPFQEVKGHH Trigger: GTGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| 3UTR GCA 72 bp | CCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTaGACACTGTGCCTGTGGCATGGAAGGCTCCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PQLFLRSLNSNN*TLCLWHGRLPF Trigger: GAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| 3UTR GCA 72 bp | TTCCTAAGATCTCTGAATTCCAACAACTGCACACTGTaGCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: FLRSLNSNNCTL*LWHGRLPFRRS Trigger: TGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGAGATCTTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR TCA 90 bp | GCATGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTTCTGGCCAACTCAAATaGATAGGCTTTCCCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWKAPFQEVKGHHPLATTSGQLK*IGFPDA Trigger: GGCATCGGGAAAGCCTATTCATTTGAGTTGGCCAGA...AGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | GCATGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTGAAGTGCTCAGGAAATaGCTTGGGAAAAAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AWKAPFQEVKGHHPLATTEVLRK*LGKKLG Trigger: CCCCAGCTTTTTCCCAAGCCATTTCCTGAGCACTTC...AGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGTCACACAGCTTCCAGTaGTCCTCTCAATCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QEVKGHHPLATTTNEELWSHSFQ*SSQSLL Trigger: CAGAAGAGATTGAGAGGACCACTGGAAGCTGTGTGA...CCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | TCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGATGTCCTTCGCAGGAAAGAGCTTaGCAAAGCCTTGCAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRVTTLWPLLPMKSSGCPSQERA*QSLAEP Trigger: AGGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGA...AGGACATCCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | AATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGGGCTTGGGAAAAAGCTaGGGAGCATTCCAACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSNNCTLCLWHGRLPFRRGLGKS*GAFQRC Trigger: ACAACGTTGGAATGCTCCCCAGCTTTTTCCCAAGCC...CCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | TCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGATGTCCTGCTCAGGAAATGGCTTaGGAAAAAGCTGGGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SRVTTLWPLLPMKSSGCPAQEMA*EKAGEH Trigger: ATGCTCCCCAGCTTTTTCCCAAGCCATTTCCTGAGC...AGGACATCCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGTGTACACAAAAGCCTTaGAAGCTGAGTACAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEVKGHHPLATTTNEELWCTQKP*KLSTGC Trigger: ACAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACA...CCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR CCA 90 bp | GCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCAACTCATCGGCGGTCTTaGTCATCTTGTTATTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHCACGMEGSLSGGQGSPTHRRS*SSCYLG Trigger: ACCTAAATAACAAGATGACCAAGACCGCCGATGAGT...TGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR TCA 90 bp | CAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGCTTTGTCATTGGGGTTaGAATAGAATAAGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEVKGHHPLATTTNEELWLCHWG*NRIRGQ Trigger: CTGACCCCTTATTCTATTTCAACCCCAATGACAAAG...CCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR TCA 90 bp | GCATGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTTCAGAATTATTGCAATaGTTTCATGAGCAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWKAPFQEVKGHHPLATTSELLQ*FHEQGS Trigger: GCTGCCTTGCTCATGAAATCATTGCAATAATTCTGA...AGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGGCCCACGAAGAGCCCTaGAGCAATGAAGAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQAHEEP*SNEELL Trigger: GAGAAGCTCTTCATTGCTGCAGGGCTCTTCGTGGGC...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | CCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTCAATTGACTCCATGTGTTTaGGAACAAGCTGTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTAHCACGMEGSLSGGQLTPCV*EQAVSS Trigger: AGATGACACAGCTTGTTCTCAAACACATGGAGTCAA...TTGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR TCA 90 bp | TCTGAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGACGAAGGGCTGCGCCTaGAGAAATATTCAAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEFQQLHTVPVAWKAPFQTKGCA*RNIQDE Trigger: CTCATCTTGAATATTTCTTCAGGCGCAGCCCTTCGT...CTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR TCA 90 bp | TCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGATGTCCTATTGCAATGATTTCATaGGCAAGGCAGCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVTTLWPLLPMKSSGCPIAMIS*ARQPQD Trigger: ATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAAT...AGGACATCCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR CCA 90 bp | GAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGTGTACACAAAAGCCTTaGAAGCTGAGTACAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFQQLHTVPVAWKAPFQECTQKP*KLSTGC Trigger: ACAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACA...CTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR TCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGGAGGCCTTTCCTCCTTaGCTCCATGTGTTTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQEAFPP*LHVFEN Trigger: GTTCTCAAACACATGGAGTCAAGGAGGAAAGGCCTC...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | GAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGCTTTGTCATTGGGGTTaGAATAGAATAAGGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: EFQQLHTVPVAWKAPFQELCHWG*NRIRGQ Trigger: CTGACCCCTTATTCTATTTCAACCCCAATGACAAAG...CTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR GCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCGCCCACGAAGAGCCCTaGAGCAATGAAGAGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCAHEEP*SNEELL Trigger: GAGAAGCTCTTCATTGCTGCAGGGCTCTTCGTGGGC...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGGAAGTGCTCAGGAAATaGCTTGGGAAAAAGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQEVLRK*LGKKLG Trigger: CCCCAGCTTTTTCCCAAGCCATTTCCTGAGCACTTC...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CCA 90 bp | TCTGAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTAATGTTGCAGTaGATGAGATTCTGGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SEFQQLHTVPVAWKAPFQEVMLQ*MRFWLS Trigger: TGAGAGCCAGAATCTCATCCACTGCAACATTACCTC...CTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR TCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGACGAAGGGCTGCGCCTaGAGAAATATTCAAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQTKGCA*RNIQDE Trigger: CTCATCTTGAATATTTCTTCAGGCGCAGCCCTTCGT...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CCA 90 bp | TCTGAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGCAATCTCTTCTGCAATaGTCTGTAGCTTTTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SEFQQLHTVPVAWKAPFQQSLLQ*SVAFPV Trigger: CACTGGAAAAGCTACAGACCATTGCAGAAGAGATTG...CTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR TCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCTCTGGCCAACTCAAATaGATAGGCTTTCCCGATGCC | + |
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Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCSGQLK*IGFPDA Trigger: GGCATCGGGAAAGCCTATTCATTTGAGTTGGCCAGA...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCGAGGCCTTTCCTCCTTaGCTCCATGTGTTTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCEAFPP*LHVFEN Trigger: GTTCTCAAACACATGGAGTCAAGGAGGAAAGGCCTC...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGAGCTTGGCAAAGCCTTaGAGAACCTCAGAAAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQSLAKP*RTSEKG Trigger: ACCTTTTTCTGAGGTTCTGCAAGGCTTTGCCAAGCT...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR GCA 90 bp | AATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGCCGGTTCAGAATTATTaGAATGATTTCATGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: NSNNCTLCLWHGRLPFRRPVQNY*NDFMSK Trigger: CTTGCTCATGAAATCATTGCAATAATTCTGAACCGG...CCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
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| CDS-3UTR CCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCTCGCAGGAAAGAGCTTaGCAAAGCCTTGCAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCSQERA*QSLAEP Trigger: AGGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGA...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCGAAGTGCTCAGGAAATaGCTTGGGAAAAAGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCEVLRK*LGKKLG Trigger: CCCCAGCTTTTTCCCAAGCCATTTCCTGAGCACTTC...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | AAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGTCTGGCCAACTCAAATaGATAGGCTTTCCCGATGCC | + |
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Preference number: 4 (lower is better) Translates to: KHSLYTPAFPKISEFQQLSGQLK*IGFPDA Trigger: GGCATCGGGAAAGCCTATTCATTTGAGTTGGCCAGA...CAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCACGAAGGGCTGCGCCTaGAGAAATATTCAAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCTKGCA*RNIQDE Trigger: CTCATCTTGAATATTTCTTCAGGCGCAGCCCTTCGT...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR GCA 90 bp | GAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGTTCTCTGGTAAAATCTaGTTGTACAATCTTCACACA | + |
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Preference number: 4 (lower is better) Translates to: EFQQLHTVPVAWKAPFQEFSGKI*LYNLHT Trigger: TGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAA...CTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGACTCATCGGCGGTCTTaGTCATCTTGTTATTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQTHRRS*SSCYLG Trigger: ACCTAAATAACAAGATGACCAAGACCGCCGATGAGT...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACGAGGCCTTTCCTCCTTaGCTCCATGTGTTTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNEAFPP*LHVFEN Trigger: GTTCTCAAACACATGGAGTCAAGGAGGAAAGGCCTC...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCATTGCAATGATTTCATaGGCAAGGCAGCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCIAMIS*ARQPQD Trigger: ATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAAT...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS-3UTR TCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGTCAGAATTATTGCAATaGTTTCATGAGCAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQSELLQ*FHEQGS Trigger: GCTGCCTTGCTCATGAAATCATTGCAATAATTCTGA...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS-3UTR GCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACCTCAGAAAAAGGTGCTaGGAGAACCTCATGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNLRKRC*ENLMHF Trigger: GAAGTGCATGAGGTTCTCGCAGCACCTTTTTCTGAG...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACTCGCAGGAAAGAGCTTaGCAAAGCCTTGCAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNSQERA*QSLAEP Trigger: AGGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGA...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTCACACAGCTTCCAGTaGTCCTCTCAATCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNSHSFQ*SSQSLL Trigger: CAGAAGAGATTGAGAGGACCACTGGAAGCTGTGTGA...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACGGCTTGGGAAAAAGCTaGGGAGCATTCCAACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNGLGKS*GAFQRC Trigger: ACAACGTTGGAATGCTCCCCAGCTTTTTCCCAAGCC...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACGCTCAGGAAATGGCTTaGGAAAAAGCTGGGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNAQEMA*EKAGEH Trigger: ATGCTCCCCAGCTTTTTCCCAAGCCATTTCCTGAGC...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR TCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCTTGACTCCATGTGTTTaGGAACAAGCTGTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCLTPCV*EQAVSS Trigger: AGATGACACAGCTTGTTCTCAAACACATGGAGTCAA...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACATTGCAATGATTTCATaGGCAAGGCAGCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNIAMIS*ARQPQD Trigger: ATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAAT...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR TCA 90 bp | AAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGATTGCAATGATTTCATaGGCAAGGCAGCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHSLYTPAFPKISEFQQLIAMIS*ARQPQD Trigger: ATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAAT...CAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR GCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACCTCAGAAAAAGGTGCTaGGAGAACCTCATGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNLRKRC*ENLMHF Trigger: GAAGTGCATGAGGTTCTCGCAGCACCTTTTTCTGAG...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGCCGGTTCAGAATTATTaGAATGATTTCATGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSSSISLDASLPFIETQPVQNY*NDFMSK Trigger: CTTGCTCATGAAATCATTGCAATAATTCTGAACCGG...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGTACACAAAAGCCTTaGAAGCTGAGTACAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNCTQKP*KLSTGC Trigger: ACAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACA...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCACTCATCGGCGGTCTTaGTCATCTTGTTATTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCTHRRS*SSCYLG Trigger: ACCTAAATAACAAGATGACCAAGACCGCCGATGAGT...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCTGCTATAGAAGATTCTaGAAGGGATCCGGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCCYRRF*KGSGSE Trigger: TTCTGAACCGGATCCCTTCCAGAATCTTCTATAGCA...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACCTTTGTCATTGGGGTTaGAATAGAATAAGGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNLCHWG*NRIRGQ Trigger: CTGACCCCTTATTCTATTTCAACCCCAATGACAAAG...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACCAATCTCTTCTGCAATaGTCTGTAGCTTTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNQSLLQ*SVAFPV Trigger: CACTGGAAAAGCTACAGACCATTGCAGAAGAGATTG...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACGAGGTAATGTTGCAGTaGATGAGATTCTGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNEVMLQ*MRFWLS Trigger: TGAGAGCCAGAATCTCATCCACTGCAACATTACCTC...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACTGTACACAAAAGCCTTaGAAGCTGAGTACAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNCTQKP*KLSTGC Trigger: ACAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACA...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCTATAGAAGATTCTaGAAGGGATCCGGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNCYRRF*KGSGSE Trigger: TTCTGAACCGGATCCCTTCCAGAATCTTCTATAGCA...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTCAGAATTATTGCAATaGTTTCATGAGCAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNSELLQ*FHEQGS Trigger: GCTGCCTTGCTCATGAAATCATTGCAATAATTCTGA...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR TCA 90 bp | AAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGTCAGAATTATTGCAATaGTTTCATGAGCAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHSLYTPAFPKISEFQQLSELLQ*FHEQGS Trigger: GCTGCCTTGCTCATGAAATCATTGCAATAATTCTGA...CAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR CCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACTGCTATAGAAGATTCTaGAAGGGATCCGGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNCYRRF*KGSGSE Trigger: TTCTGAACCGGATCCCTTCCAGAATCTTCTATAGCA...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCTTCTCTGGTAAAATCTaGTTGTACAATCTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCFSGKI*LYNLHT Trigger: TGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAA...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACCCGGTTCAGAATTATTaGAATGATTTCATGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNTAFTPQLFLRSLNSNNPVQNY*NDFMSK Trigger: CTTGCTCATGAAATCATTGCAATAATTCTGAACCGG...GTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS-3UTR GCA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACTTCTCTGGTAAAATCTaGTTGTACAATCTTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNFSGKI*LYNLHT Trigger: TGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAA...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGATCGCAGGAAAGAGCTaGGCAAAGCCTTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: QEVKGHHPLATTTNEELWIAGKS*AKPCRT Trigger: GGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGAT...CCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCGTGTACACAAAAGCCTaGGAAGCTGAGTACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKAPFQEVKGHHPLATTTVYTKA*EAEYRL Trigger: CAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACAC...GGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
||
| CDS TCA 90 bp | CCCGATGCCATCGCCTGCTCCGGTAATCACTGCCCATTGTCCCATTaGTCGCAGGAAAGAGCTTGGCAAAGCCTTGCAGAACCTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PDAIACSGNHCPLSH*SQERAWQSLAEPQK Trigger: TTTCTGAGGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGATCAATGGGACAATGGGCAGTGATTACCGGAGCAGGCGATGGCATCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
||
| CDS-3UTR CAA 90 bp | AACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGGAGGTCAAGGACTACGGAGGTAATGTaGCAGTGGATGAGATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NNCTLCLWHGRLPFRRSRTTEVM*QWMRFW Trigger: CCAGAATCTCATCCACTGCAACATTACCTCCGTAGT...CCTTGACCTCCTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
||
| CDS-3UTR CAA 90 bp | GCATGGAAGGCTCCCTTTCAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTTCCACACTCAGAGCCTaGGAAAATGTGTACACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AWKAPFQEVKGHHPLATTSTLRA*ENVYTK Trigger: TTTTGTGTACACATTTTCCAAGGCTCTGAGTGTGGA...AGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTGAAAGGGAGCCTTCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
||
| CDS-3UTR CAA 90 bp | ACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGATGTCCTTCTCAACTCGTGTACACAAAAGCCTaGGAAGCTGAGTACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TTLWPLLPMKSSGCPSQLVYTKA*EAEYRL Trigger: CAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACAC...GAGTTGAGAAGGACATCCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGATCGCAGGAAAGAGCTaGGCAAAGCCTTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSISLDASLPFIETQIAGKS*AKPCRT Trigger: GGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGAT...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGTCAAGGGTCACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGGGGAGCATTCCAACGTaGTTGACTAAAATTCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QEVKGHHPLATTTNEELWGSIPT*LTKIPI Trigger: AATAGGAATTTTAGTCAACAACGTTGGAATGCTCCC...CCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGTGACCCTTGACCTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
||
| CDS CCA 90 bp | TTGCAGTGGATGAGATTCTGGCTCTCACCGGAAGTGCTCAGGAAATaGCTTGGGAAAAAGCTGGGGAGCATTCCAACGTTGTTGACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQWMRFWLSPEVLRK*LGKKLGSIPTLLTK Trigger: TTTAGTCAACAACGTTGGAATGCTCCCCAGCTTTTTCCCAAGCCATTTCCTGAGCACTTCCGGTGAGAGCCAGAATCTCATCCACTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
||
| CDS CCA 90 bp | TGTGTCATCTTGACTACGGAGGTAATGTTGCAGTGGATGAGATTCTaGCTCTCACCGGAAGTGCTCAGGAAATGGCTTGGGAAAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVILTTEVMLQWMRF*LSPEVLRKWLGKKL Trigger: CAGCTTTTTCCCAAGCCATTTCCTGAGCACTTCCGGTGAGAGCCAGAATCTCATCCACTGCAACATTACCTCCGTAGTCAAGATGACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACAACTACGGAGGTAATGTaGCAGTGGATGAGATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGSSSISLDASLPFIETTTEVM*QWMRFW Trigger: CCAGAATCTCATCCACTGCAACATTACCTCCGTAGT...TGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGGTGTACACAAAAGCCTaGGAAGCTGAGTACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGSSSISLDASLPFIETQVYTKA*EAEYRL Trigger: CAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACAC...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
||
| CDS CCA 90 bp | TTGAGAACAAGCTGTGTCATCTTGACTACGGAGGTAATGTTGCAGTaGATGAGATTCTGGCTCTCACCGGAAGTGCTCAGGAAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRTSCVILTTEVMLQ*MRFWLSPEVLRKWL Trigger: AAGCCATTTCCTGAGCACTTCCGGTGAGAGCCAGAATCTCATCCACTGCAACATTACCTCCGTAGTCAAGATGACACAGCTTGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCATCGCAGGAAAGAGCTaGGCAAAGCCTTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCIAGKS*AKPCRT Trigger: GGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGAT...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAATTCCAACAACTGCACACTGTGCCTGTGGCATGGAAGGCTCCCTTTCAGTCCACACTCAGAGCCTaGGAAAATGTGTACACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEFQQLHTVPVAWKAPFQSTLRA*ENVYTK Trigger: TTTTGTGTACACATTTTCCAAGGCTCTGAGTGTGGA...CTGAAAGGGAGCCTTCCATGCCACAGGCACAGTGTGCAGTTGTTGGAATTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166224.8 ENSMUST00000221513.2 |
||
| CDS-3UTR CAA 90 bp | ACCACCCTCTGGCCACTACTACCAATGAAGAGCTCTGGATGTCCTTCTCAACTCTCTGGTAAAATCTGCTaGTACAATCTTCACACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTLWPLLPMKSSGCPSQLSGKIC*YNLHTA Trigger: AGCTGTGTGAAGATTGTACAAGCAGATTTTACCAGA...GAGTTGAGAAGGACATCCAGAGCTCTTCATTGGTAGTAGTGGCCAGAGGGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166224.8 |
||
| CDS-3UTR CAA 90 bp | AACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACAACTGCACTACGGAGGTAATGTaGCAGTGGATGAGATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTAFTPQLFLRSLNSNNCTTEVM*QWMRFW Trigger: CCAGAATCTCATCCACTGCAACATTACCTCCGTAGT...GCAGTTGTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
||
| CDS TCA 90 bp | AAGATTCTGGAAGGGATCCGGTTCAGAATTATTGCAATGATTTCATaGGCAAGGCAGCCACAGGATTCAGCTCCGATCGTGACATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KILEGIRFRIIAMIS*ARQPQDSAPIVTYF Trigger: GAAATATGTCACGATCGGAGCTGAATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAATAATTCTGAACCGGATCCCTTCCAGAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGTCTGGTAAAATCTGCTaGTACAATCTTCACACAGCT | + |
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Preference number: 5 (lower is better) Translates to: RGSSSISLDASLPFIETQSGKIC*YNLHTA Trigger: AGCTGTGTGAAGATTGTACAAGCAGATTTTACCAGA...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTTCTTCCAGCATTTCCCTTGATGCCAGCCTCCCTTTTATAGAAACACAGGGGAGCATTCCAACGTaGTTGACTAAAATTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: RGSSSISLDASLPFIETQGSIPT*LTKIPI Trigger: AATAGGAATTTTAGTCAACAACGTTGGAATGCTCCC...CTGTGTTTCTATAAAAGGGAGGCTGGCATCAAGGGAAATGCTGGAAGAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS-3UTR CAA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACGTGTACACAAAAGCCTaGGAAGCTGAGTACAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNVYTKA*EAEYRL Trigger: CAGCCTGTACTCAGCTTCCAAGGCTTTTGTGTACAC...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS-3UTR CAA 90 bp | TATAGAAACACAGCCTTTACACCCCAGCTTTTCCTAAGATCTCTGAATTCCAACTCCACACTCAGAGCCTaGGAAAATGTGTACACAAAA | + |
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Preference number: 5 (lower is better) Translates to: YRNTAFTPQLFLRSLNSNSTLRA*ENVYTK Trigger: TTTTGTGTACACATTTTCCAAGGCTCTGAGTGTGGA...GTTGGAATTCAGAGATCTTAGGAAAAGCTGGGGTGTAAAGGCTGTGTTTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS GCA 90 bp | AAGGTGTTCTTTAATATGGTCATAGATGTCTTCTCTGGTAAAATCTaGTTGTACAATCTTCACACAGCTTCCAGTGGTCCTCTCAATCTC | + |
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Preference number: 5 (lower is better) Translates to: KVFFNMVIDVFSGKI*LYNLHTASSGPLNL Trigger: GAGATTGAGAGGACCACTGGAAGCTGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAAGACATCTATGACCATATTAAAGAACACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS CAA 90 bp | ACTGCCCATTGTCCCATTGATCGCAGGAAAGAGCTTGGCAAAGCCTaGCAGAACCTCAGAAAAAGGTGCTGCGAGAACCTCATGCACTTC | + |
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Preference number: 6 (lower is better) Translates to: TAHCPIDRRKELGKA*QNLRKRCCENLMHF Trigger: GAAGTGCATGAGGTTCTCGCAGCACCTTTTTCTGAGGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGATCAATGGGACAATGGGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS GCA 72 bp | GTCCCATTGATCGCAGGAAAGAGCTTGGCAAAGCCTTaGAGAACCTCAGAAAAAGGTGCTGCGAGAACCTCA | + |
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Preference number: 6 (lower is better) Translates to: VPLIAGKSLAKP*RTSEKGAARTS Trigger: TGAGGTTCTCGCAGCACCTTTTTCTGAGGTTCTGCAAGGCTTTGCCAAGCTCTTTCCTGCGATCAATGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS CCA 72 bp | ATTCTGGCTCTCACCGGAAGTGCTCAGGAAATGGCTTaGGAAAAAGCTGGGGAGCATTCCAACGTTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: ILALTGSAQEMA*EKAGEHSNVVD Trigger: GTCAACAACGTTGGAATGCTCCCCAGCTTTTTCCCAAGCCATTTCCTGAGCACTTCCGGTGAGAGCCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS CCA 72 bp | ATGAGATTCTGGCTCTCACCGGAAGTGCTCAGGAAATaGCTTGGGAAAAAGCTGGGGAGCATTCCAACGTTG | + |
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Preference number: 6 (lower is better) Translates to: MRFWLSPEVLRK*LGKKLGSIPTL Trigger: CAACGTTGGAATGCTCCCCAGCTTTTTCCCAAGCCATTTCCTGAGCACTTCCGGTGAGAGCCAGAATCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS CCA 72 bp | TTGACTACGGAGGTAATGTTGCAGTGGATGAGATTCTaGCTCTCACCGGAAGTGCTCAGGAAATGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LTTEVMLQWMRF*LSPEVLRKWLG Trigger: CCCAAGCCATTTCCTGAGCACTTCCGGTGAGAGCCAGAATCTCATCCACTGCAACATTACCTCCGTAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS TCA 72 bp | AAGTACAACATTGAGTCCATGTCTGGCCAACTCAAATaGATAGGCTTTCCCGATGCCATCGCCTGCTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: KYNIESMSGQLK*IGFPDAIACSG Trigger: ACCGGAGCAGGCGATGGCATCGGGAAAGCCTATTCATTTGAGTTGGCCAGACATGGACTCAATGTTGTACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS TCA 72 bp | GAAGGGATCCGGTTCAGAATTATTGCAATGATTTCATaGGCAAGGCAGCCACAGGATTCAGCTCCGATCGTG | + |
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Preference number: 6 (lower is better) Translates to: EGIRFRIIAMIS*ARQPQDSAPIV Trigger: CACGATCGGAGCTGAATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAATAATTCTGAACCGGATCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS CAA 90 bp | GAAGAAATATTCAAGATGAGGCCTTTCCTCCTTGACTCCATGTGTTaGAGAACAAGCTGTGTCATCTTGACTACGGAGGTAATGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EEIFKMRPFLLDSMC*RTSCVILTTEVMLQ Trigger: CTGCAACATTACCTCCGTAGTCAAGATGACACAGCTTGTTCTCAAACACATGGAGTCAAGGAGGAAAGGCCTCATCTTGAATATTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 |
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| CDS GCA 72 bp | ATAGAAGATTCTGGAAGGGATCCGGTTCAGAATTATTaGAATGATTTCATGAGCAAGGCAGCCACAGGATTC | + |
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Preference number: 6 (lower is better) Translates to: IEDSGRDPVQNY*NDFMSKAATGF Trigger: GAATCCTGTGGCTGCCTTGCTCATGAAATCATTGCAATAATTCTGAACCGGATCCCTTCCAGAATCTTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS CAA 90 bp | GTGTTCTTTAATATGGTCATAGATGTCTTCTCTGGTAAAATCTGCTaGTACAATCTTCACACAGCTTCCAGTGGTCCTCTCAATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VFFNMVIDVFSGKIC*YNLHTASSGPLNLF Trigger: GAAGAGATTGAGAGGACCACTGGAAGCTGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAAGACATCTATGACCATATTAAAGAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS GCA 72 bp | TTTAATATGGTCATAGATGTCTTCTCTGGTAAAATCTaGTTGTACAATCTTCACACAGCTTCCAGTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FNMVIDVFSGKI*LYNLHTASSGP Trigger: AGGACCACTGGAAGCTGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAAGACATCTATGACCATATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000222783.2 ENSMUST00000222810.2 |
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| CDS CAA 72 bp | GATTCTTTAACAAACTCATCGGCGGTCTTGGTCATCTaGTTATTTAGGTACTTTGTCATTGGGGTTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: DSLTNSSAVLVI*LFRYFVIGVEI Trigger: TATTTCAACCCCAATGACAAAGTACCTAAATAACAAGATGACCAAGACCGCCGATGAGTTTGTTAAAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS CAA 72 bp | TATTTCAAGGATTCTTTAACAAACTCATCGGCGGTCTaGGTCATCTTGTTATTTAGGTACTTTGTCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: YFKDSLTNSSAV*VILLFRYFVIG Trigger: CCCAATGACAAAGTACCTAAATAACAAGATGACCAAGACCGCCGATGAGTTTGTTAAAGAATCCTTGAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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| CDS CAA 90 bp | ATCGTGACATATTTCAAGGATTCTTTAACAAACTCATCGGCGGTCTaGGTCATCTTGTTATTTAGGTACTTTGTCATTGGGGTTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: IVTYFKDSLTNSSAV*VILLFRYFVIGVEI Trigger: TATTTCAACCCCAATGACAAAGTACCTAAATAACAAGATGACCAAGACCGCCGATGAGTTTGTTAAAGAATCCTTGAAATATGTCACGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039832.7 ENSMUST00000166224.8 ENSMUST00000221513.2 ENSMUST00000222783.2 |
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