Pregenerated sensors for HSD17B14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030825Ensembl transcript IDs: ENSMUST00000107752.12, ENSMUST00000210300.2, ENSMUST00000210997.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCAGGAAAACGGCTGCAGCCGCCACCTCGGCTGGCTGGCCCATaGGGCCCAGGGGCTGGGCCAAGGTGCCTTCTAGAATGGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: RPGKRLQPPPRLAGP*GPGAGPRCLLEWWP Trigger: GGGCCACCATTCTAGAAGGCACCTTGGCCCAGCCCCTGGGCCGCATGGGCCAGCCAGCCGAGGTGGCGGCTGCAGCCGTTTTCCTGGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | GCTGCAGCCGCCACCTCGGCTGGCTGGCCCATGCGGCCCAGGGGCTaGGCCAAGGTGCCTTCTAGAATGGTGGCCCTGGGGTCTGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: AAAATSAGWPMRPRG*AKVPSRMVALGSEV Trigger: AACTTCAGACCCCAGGGCCACCATTCTAGAAGGCACCTTGGCCCAGCCCCTGGGCCGCATGGGCCAGCCAGCCGAGGTGGCGGCTGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | GCTTCAGAGGCCAGGAAAACGGCTGCAGCCGCCACCTCGGCTGGCTaGCCCATGCGGCCCAGGGGCTGGGCCAAGGTGCCTTCTAGAATG | + |
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Preference number: 1 (lower is better) Translates to: ASEARKTAAAATSAG*PMRPRGWAKVPSRM Trigger: CATTCTAGAAGGCACCTTGGCCCAGCCCCTGGGCCGCATGGGCCAGCCAGCCGAGGTGGCGGCTGCAGCCGTTTTCCTGGCCTCTGAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | GGCCCATGCGGCCCAGGGGCTGGGCCAAGGTGCCTTCTAGAATGGTaGCCCTGGGGTCTGAAGTTGAGGCTGCAAGCTCTTCCCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: GPCGPGAGPRCLLEW*PWGLKLRLQALPTV Trigger: CACTGTGGGAAGAGCTTGCAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAGAAGGCACCTTGGCCCAGCCCCTGGGCCGCATGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | GTTCTGCACCCCCGGTCACGAGAAGCTCAAGCCCTGTACAGAAGGTaGCTTCAGAGGCCAGGAAAACGGCTGCAGCCGCCACCTCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VLHPRSREAQALYRR*LQRPGKRLQPPPRL Trigger: CAGCCGAGGTGGCGGCTGCAGCCGTTTTCCTGGCCTCTGAAGCCACCTTCTGTACAGGGCTTGAGCTTCTCGTGACCGGGGGTGCAGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR TCA 90 bp | AGCTTGATCAAGGTGTATGTCCCCAGCAGGTTCACCTCCAGAAGCTaGCGGAAGCCCTGGGCAGAGGTCTCCTCGGGCAGCTGTGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SLIKVYVPSRFTSRS*RKPWAEVSSGSCAG Trigger: ACCTGCACAGCTGCCCGAGGAGACCTCTGCCCAGGGCTTCCGTCAGCTTCTGGAGGTGAACCTGCTGGGGACATACACCTTGATCAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR GCA 90 bp | CAGAAGCTGACGGAAGCCCTGGGCAGAGGTCTCCTCGGGCAGCTGTaGAGGTGGGTTGTGGAAGGTGAATTTCCCTGCTTAGACACCACT | + |
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Preference number: 1 (lower is better) Translates to: QKLTEALGRGLLGQL*RWVVEGEFPCLDTT Trigger: AGTGGTGTCTAAGCAGGGAAATTCACCTTCCACAACCCACCTGCACAGCTGCCCGAGGAGACCTCTGCCCAGGGCTTCCGTCAGCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | CTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTaGGACCTGAAAGTTAAGTGGGAGAGCCCCTGCCTAGAATCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LRGPRCQQLAYPEFL*DLKVKWESPCLESS Trigger: GGAGGATTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | ACCAAGCTGGAGATGTTGATGATGTTCCCTCTGCTCTTCCGCAGGTaGGGGAGGGCAAGCTTGATCAAGGTGTATGTCCCCAGCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: TKLEMLMMFPLLFRR*GRASLIKVYVPSRF Trigger: GAACCTGCTGGGGACATACACCTTGATCAAGCTTGCCCTCCCCCACCTGCGGAAGAGCAGAGGGAACATCATCAACATCTCCAGCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 90 bp | CAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGAAAGTTAAGTaGGAGAGCCCCTGCCTAGAATCCTCCAGTGGGGCACTGGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: QQLAYPEFLWDLKVK*ESPCLESSSGALEC Trigger: ACACTCCAGTGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR GCA 90 bp | TATCCTGAGTTTCTTTGGGACCTGAAAGTTAAGTGGGAGAGCCCCTaGCTAGAATCCTCCAGTGGGGCACTGGAGTGTGACTCAGTGATA | + |
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Preference number: 1 (lower is better) Translates to: YPEFLWDLKVKWESP*LESSSGALECDSVI Trigger: TATCACTGAGTCACACTCCAGTGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR CAA 90 bp | GTAAGGGCCTGGGACTGGCCGATGGCCCCGACCAAGCTGGAGATGTaGATGATGTTCCCTCTGCTCTTCCGCAGGTGGGGGAGGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: VRAWDWPMAPTKLEM*MMFPLLFRRWGRAS Trigger: GCTTGCCCTCCCCCACCTGCGGAAGAGCAGAGGGAACATCATCAACATCTCCAGCTTGGTCGGGGCCATCGGCCAGTCCCAGGCCCTTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCACGTAGGTAAGGGCCTGGGACTGGCCGATGGCCCCGACCAAGCTGGATGTGCAGGTGGGTTGTaGAAGGTGAATTTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GGHVGKGLGLADGPDQAGCAGGL*KVNFPA Trigger: AGCAGGGAAATTCACCTTCCACAACCCACCTGCACA...TCCAGCTTGGTCGGGGCCATCGGCCAGTCCCAGGCCCTTACCTACGTGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGTGGGAGAGCCCCTGCCTAGAATCCTCCAGTGGGGCACTGGAGTGTGACAAGTGGGAGAGCCCCTaGCTAGAATCCTCCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VKWESPCLESSSGALECDKWESP*LESSSG Trigger: CCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTT...GTCACACTCCAGTGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGGGCAAGGGAAGTAGCAGGTACTGAGAGGGCCTCGCTGCCAGCAGCTAAGAGAGAGGGCAAGTaGACCAAGAAAGGAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GAGAREVAGTERASLPAAKREGK*TKKGAK Trigger: CTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTT...AGCTGCTGGCAGCGAGGCCCTCTCAGTACCTGCTACTTCCCTTGCCCCTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGCAAAGTCCCTGGGCTAGAGAGGTTAGGAGCAGGGGCAAGGGAAGTAGCGGGCAGCTGTGCAGGTaGGTTGTGGAAGGTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: GAQSPWAREVRSRGKGSSGQLCR*VVEGEF Trigger: AAATTCACCTTCCACAACCCACCTGCACAGCTGCCC...GCTACTTCCCTTGCCCCTGCTCCTAACCTCTCTAGCCCAGGGACTTTGCGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CAA 90 bp | GCTGGGCCAAGGTGCCTTCTAGAATGGTGGCCCTGGGGTCTGAAGTaGAGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGATGTTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AGPRCLLEWWPWGLK*RLQALPTVESRCFL Trigger: CAGGAAACATCTGGACTCCACTGTGGGAAGAGCTTGCAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAGAAGGCACCTTGGCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTTCATGAGTGAAGGGTaGATGGCAAGTGGGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QAGLELTEICLLSASPPGFMSEG*MASGWR Trigger: TCTCCACCCACTTGCCATTCACCCTTCACTCATGAA...GCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACATTCCTCCTCGGGCAGCTGTaGAGGTGGGTTGTGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RRERASGPRKEPRANSTFLLGQL*RWVVEG Trigger: ACCTTCCACAACCCACCTGCACAGCTGCCCGAGGAG...GAATGTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGAGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGATGTTTCCTGGGGAGACTGCTCTTCCGCAGGTaGGGGAGGGCAAGCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: KLRLQALPTVESRCFLGRLLFRR*GRASLI Trigger: GATCAAGCTTGCCCTCCCCCACCTGCGGAAGAGCAG...TCTCCCCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTTGCAGCCTCAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGGACCTGAAAGTTAAGTaGGAGAGCCCCTGCCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: LRGPRCQQLAYPEFLWDLDLKVK*ESPCLE Trigger: TTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTC...CAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGATGTTTCCTGGGGAGATGCAGTCCAAAGCTTTGGTCATaGCAGTCACTGCACCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RLQALPTVESRCFLGRCSPKLWS*QSLHPW Trigger: CCAAGGGTGCAGTGACTGCCATGACCAAAGCTTTGG...ACTGCATCTCCCCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTTGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGCCAAAGCCAAAGCTTTaGTCATGGCAGTCACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LRGPRCQQLAYPEFLWDLPKPKL*SWQSLH Trigger: GTGCAGTGACTGCCATGACCAAAGCTTTGGCTTTGG...CAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGAGTTTCTTTGGGACCTaGAAGTTAAGTGGGAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRGPRCQQLAYPEFLWDLSFFGT*KLSGRA Trigger: GGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACT...CAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACAGTTTCTTTGGGACCTaGAAGTTAAGTGGGAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: REKREGKWTKKGAKGEQHSFFGT*KLSGRA Trigger: GGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACT...GTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGAGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGATGTTTCCTGGGGAGAGACCTGAAAGTTAAGTaGGAGAGCCCCTGCCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: KLRLQALPTVESRCFLGRDLKVK*ESPCLE Trigger: TTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTC...TCTCCCCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTTGCAGCCTCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTGAGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGATGTTTCCTGGGGAGACTCGGACACCATGTCTaGTTTCATCCAAAGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: KLRLQALPTVESRCFLGRLGHHV*FHPKPK Trigger: CTTTGGCTTTGGATGAAAGCAGACATGGTGTCCGAG...TCTCCCCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTTGCAGCCTCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTTATTGTAGCTATAAGGGAGAGTATAGCCAGAGGCATCGGGTAGAGTCCAAGAGAGAGGGCAAGTaGACCAAGAAAGGAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GFYCSYKGEYSQRHRVESKREGK*TKKGAK Trigger: CTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTT...GGACTCTACCCGATGCCTCTGGCTATACTCTCCCTTATAGCTACAATAAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCACACAAGAGATCCAGGTTTAATCTCCAGTACTACAAGAAAGGAAGGGAGCACATTCATCCAAAATaGCAGGTTTTTATAGGAATC | + |
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Preference number: 2 (lower is better) Translates to: LAHKRSRFNLQYYKKGREHIHPK*QVFIGI Trigger: GATTCCTATAAAAACCTGCCATTTTGGATGAATGTG...CTCCCTTCCTTTCTTGTAGTACTGGAGATTAAACCTGGATCTCTTGTGTGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR CCA 72 bp | GCCAGGAAAACGGCTGCAGCCGCCACCTCGGCTGGCTaGCCCATGCGGCCCAGGGGCTGGGCCAAGGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: ARKTAAAATSAG*PMRPRGWAKVP Trigger: AGGCACCTTGGCCCAGCCCCTGGGCCGCATGGGCCAGCCAGCCGAGGTGGCGGCTGCAGCCGTTTTCCTGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 72 bp | TGCGGCCCAGGGGCTGGGCCAAGGTGCCTTCTAGAATaGTGGCCCTGGGGTCTGAAGTTGAGGCTGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: CGPGAGPRCLLE*WPWGLKLRLQA Trigger: AGCTTGCAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAGAAGGCACCTTGGCCCAGCCCCTGGGCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 72 bp | GGCCCAGGGGCTGGGCCAAGGTGCCTTCTAGAATGGTaGCCCTGGGGTCTGAAGTTGAGGCTGCAAGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GPGAGPRCLLEW*PWGLKLRLQAL Trigger: AAGAGCTTGCAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAGAAGGCACCTTGGCCCAGCCCCTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR CCA 72 bp | CCCCGGTCACGAGAAGCTCAAGCCCTGTACAGAAGGTaGCTTCAGAGGCCAGGAAAACGGCTGCAGCCGCCA | + |
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Preference number: 3 (lower is better) Translates to: PRSREAQALYRR*LQRPGKRLQPP Trigger: TGGCGGCTGCAGCCGTTTTCCTGGCCTCTGAAGCCACCTTCTGTACAGGGCTTGAGCTTCTCGTGACCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR GCA 72 bp | ACGGAAGCCCTGGGCAGAGGTCTCCTCGGGCAGCTGTaGAGGTGGGTTGTGGAAGGTGAATTTCCCTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: TEALGRGLLGQL*RWVVEGEFPCL Trigger: TAAGCAGGGAAATTCACCTTCCACAACCCACCTGCACAGCTGCCCGAGGAGACCTCTGCCCAGGGCTTCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGCCTGGGGAGATGCAGTaGACTCGGACACCATGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LRGPRCQQLAYPEFLWDLPGEMQ*TRTPCL Trigger: CAGACATGGTGTCCGAGTCAACTGCATCTCCCCAGG...CAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACAGCTGTGCAGGTGGGTaGTGGAAGGTGAATTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: REKREGKWTKKGAKGEQHSCAGG*WKVNFP Trigger: AGGGAAATTCACCTTCCACAACCCACCTGCACAGCT...GTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| 3UTR TCA 72 bp | ACCAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTaGGTGCATCACCGCCCGGCTGCAAATTGTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: TRLVSNSQRSAS*VHHRPAANCFH Trigger: ATGAAAACAATTTGCAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| 3UTR GCA 72 bp | TTTCTTTGGGACCTGAAAGTTAAGTGGGAGAGCCCCTaGCTAGAATCCTCCAGTGGGGCACTGGAGTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: FLWDLKVKWESP*LESSSGALECD Trigger: GTCACACTCCAGTGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR GCA 72 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTaGATCACCGCCCGGCTGCAAATTGTTTTCATGAGT | + |
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Preference number: 3 (lower is better) Translates to: GWSRTHRDLPPE*ITARLQIVFMS Trigger: ACTCATGAAAACAATTTGCAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| 3UTR CCA 72 bp | CCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTaGGACCTGAAAGTTAAGTGGGAGAGCCCCTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: PRCQQLAYPEFL*DLKVKWESPCL Trigger: TAGGCAGGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR CCA 72 bp | GCTTATCCTGAGTTTCTTTGGGACCTGAAAGTTAAGTaGGAGAGCCCCTGCCTAGAATCCTCCAGTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: AYPEFLWDLKVK*ESPCLESSSGA Trigger: TGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| 3UTR CCA 72 bp | AAAGTGAAAGGAGAGAGAGAGAAGAGAGAGGGCAAGTaGACCAAGAAAGGAGCCAAGGGCGAACAGCACATT | + |
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Preference number: 3 (lower is better) Translates to: KVKGEREKREGK*TKKGAKGEQHI Trigger: AATGTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCTCTCTCTCTCCTTTCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| CDS-3UTR GCA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGCCCCGATGCCCCGGCTaGCTCCAGTCACCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: GWSRTHRDLPPECITARLPRCPG*LQSPPP Trigger: TGGTGGTGGTGACTGGAGGCAGCCGGGGCATCGGGG...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCCGATCGCAGCCCCGATaGCCCGGCTGCCTCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: QAGLELTEICLLSASPPGRSQPR*PGCLQS Trigger: TGACTGGAGGCAGCCGGGGCATCGGGGCTGCGATCG...GCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCCTCCTCGGGCAGCTGTaGAGGTGGGTGGTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QAGLELTEICLLSASPPGLLGQL*RWVVAS Trigger: GCTGGCTACCACCCACCTGCACAGCTGCCCGAGGAG...GCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGCTCTTCCGCAGGTaGGGGAGGGCAAGCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: PGWSRTHRDLPPECITARLLFRR*GRASLI Trigger: GATCAAGCTTGCCCTCCCCCACCTGCGGAAGAGCAG...CCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| 3UTR CAA 72 bp | TGGGACTGGCCGATGGCCCCGACCAAGCTGGAGATGTaGATGATGTTCCCTCTGCTCTTCCGCAGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WDWPMAPTKLEM*MMFPLLFRRWG Trigger: CCCCCACCTGCGGAAGAGCAGAGGGAACATCATCAACATCTCCAGCTTGGTCGGGGCCATCGGCCAGTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCGAAGCTGGGCCAAGGTaGCTTCTAGAATGGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QAGLELTEICLLSASPPGEAGPR*LLEWWP Trigger: GGGCCACCATTCTAGAAGGCACCTTGGCCCAGCTTC...GCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCGGGCAGCTGTGCAGGTaGGTGGTAGCCAGCGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELTEICLLSASPPGGQLCR*VVASVI Trigger: AATAACGCTGGCTACCACCCACCTGCACAGCTGCCC...GCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGCTAGAATGGTGGCCCTaGGGTCTGAAGTTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWSRTHRDLPPECITARLLEWWP*GLKLRL Trigger: CAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAG...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGAAAGGAGAGAGAGAGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAGCCGCCACCTCGGCTaGCTGGCCCATGCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVKGEREKREGKWTKKGASRHLG*LAHAAQ Trigger: CTGGGCCGCATGGGCCAGCCAGCCGAGGTGGCGGCT...GGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCTCTCTCTCTCCTTTCACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR TCA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGTCACAGAAAACCACTTaGGCCCCACTGTCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GWSRTHRDLPPECITARLSQKTT*APLSTK Trigger: CTTCGTGGACAGTGGGGCTCAAGTGGTTTTCTGTGA...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR GCA 90 bp | AGAGAGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACGGGGCTGGGCCAAGGTaGCTTCTAGAATGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: REKREGKWTKKGAKGEQHGAGPR*LLEWWP Trigger: GGGCCACCATTCTAGAAGGCACCTTGGCCCAGCCCC...GTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGAGTCCAGATGTTTCCTaGGGAGATGCTTGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGWSRTHRDLPPECITARSPDVS*GDAWWP Trigger: TGGCCACCAAGCATCTCCCCAGGAAACATCTGGACT...CCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGAAAGTTAAGTGGGAGAGCCCCCCCCGATGCCCCGGCTaGCTCCAGTCACCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QLAYPEFLWDLKVKWESPPRCPG*LQSPPP Trigger: TGGTGGTGGTGACTGGAGGCAGCCGGGGCATCGGGG...GGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGCTAGCTG 58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR GCA 90 bp | CAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGAAAGTTAAGTGGGAGAGCCCCCGATCGCAGCCCCGATaGCCCGGCTGCCTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLAYPEFLWDLKVKWESPRSQPR*PGCLQS Trigger: TGACTGGAGGCAGCCGGGGCATCGGGGCTGCGATCG...GGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGCTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | CTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGGGGCAGCTGTGCAGGTaGGTGGTAGCCAGCGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LRGPRCQQLAYPEFLWDLGQLCR*VVASVI Trigger: AATAACGCTGGCTACCACCCACCTGCACAGCTGCCC...CAGGTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | GTACTGAGAGGGCCTCGCTGCCAGCAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGCTCTTCCGCAGGTaGGGGAGGGCAAGCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLRGPRCQQLAYPEFLWDLLFRR*GRASLI Trigger: GATCAAGCTTGCCCTCCCCCACCTGCGGAAGAGCAG...GTCCCAAAGAAACTCAGGATAAGCTAGCTGCTGGCAGCGAGGCCCTCTCAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGAAGCTCTTCCCACAGTaGAGTCCAGATGTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWSRTHRDLPPECITARLKLFPQ*SPDVSW Trigger: CCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTT...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| 3UTR CAA 72 bp | AGGTGCCTTCTAGAATGGTGGCCCTGGGGTCTGAAGTaGAGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCLLEWWPWGLK*RLQALPTVESR Trigger: TCTGGACTCCACTGTGGGAAGAGCTTGCAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAGAAGGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGCAAGCTCTTCCCACAGTGGAGTCCAGATGTTTCCTGGGGAGATGCAGTTCACAGAAAACCACTTaGGCCCCACTGTCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQALPTVESRCFLGRCSSQKTT*APLSTA Trigger: GGCAGTGGACAGTGGGGCTCAAGTGGTTTTCTGTGA...ACTGCATCTCCCCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTTGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTTATTGTAGCTATAAGGGAGAGTATAGCCAGAGGCATCGGGTAGAGTCCCTCCTCGGGCAGCTGTaGAGGTGGGTGGTAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFYCSYKGEYSQRHRVESLLGQL*RWVVAS Trigger: GCTGGCTACCACCCACCTGCACAGCTGCCCGAGGAG...GGACTCTACCCGATGCCTCTGGCTATACTCTCCCTTATAGCTACAATAAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | GTTAAGTGGGAGAGCCCCTGCCTAGAATCCTCCAGTGGGGCACTGGAGTGTGACCCAAAGCCAAAGCTTTaGTCATGGCAGTCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKWESPCLESSSGALECDPKPKL*SWQSLH Trigger: GTGCAGTGACTGCCATGACCAAAGCTTTGGCTTTGG...GTCACACTCCAGTGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCCTAGAATGGTGGCCCTaGGGTCTGAAGTTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RERRERASGPRKEPRANSLEWWP*GLKLRL Trigger: CAGCCTCAACTTCAGACCCCAGGGCCACCATTCTAG...GCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCTCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACATTCATCCCAAAGCTTTGGTCATaGCAGTCACTGCACCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RERASGPRKEPRANSTFIPKLWS*QSLHPW Trigger: CCAAGGGTGCAGTGACTGCCATGACCAAAGCTTTGG...GATGAATGTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | CAGCTAGCTTATCCTGAGTTTCTTTGGGACCTGAAAGTTAAGTGGGAGAGCCCCAGTCCAGATGTTTCCTaGGGAGATGCAGTTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLAYPEFLWDLKVKWESPSPDVS*GDAVDS Trigger: CGAGTCAACTGCATCTCCCCAGGAAACATCTGGACT...GGGGCTCTCCCACTTAACTTTCAGGTCCCAAAGAAACTCAGGATAAGCTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACATTCTCAGAAACCAGAGTCTaGAAATCTCTTTCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRERASGPRKEPRANSTFSETRV*KSLSCV Trigger: GACACAGGAAAGAGATTTGCAGACTCTGGTTTCTGA...GAATGTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210997.2 |
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| CDS-3UTR TCA 90 bp | CTAGCACACAAGAGATCCAGGTTTAATCTCCAGTACTACAAGAAAGGAAGGGAGTCACAGAAAACCACTTaGGCCCCACTGTCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAHKRSRFNLQYYKKGRESQKTT*APLSTK Trigger: CTTCGTGGACAGTGGGGCTCAAGTGGTTTTCTGTGA...CTCCCTTCCTTTCTTGTAGTACTGGAGATTAAACCTGGATCTCTTGTGTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CCA 90 bp | CTAGCACACAAGAGATCCAGGTTTAATCTCCAGTACTACAAGAAAGGAAGGGAGAAGCTCTTCCCACAGTaGAGTCCAGATGTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHKRSRFNLQYYKKGREKLFPQ*SPDVSW Trigger: CCAGGAAACATCTGGACTCCACTGTGGGAAGAGCTT...CTCCCTTCCTTTCTTGTAGTACTGGAGATTAAACCTGGATCTCTTGTGTGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGCCTAGCACACAAGAGATCCAGGTTTAATCTCCAGTACTACAAGAAACTCGGACACCATGTCTaGTTTCATCCAAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCLAHKRSRFNLQYYKKLGHHV*FHPKPK Trigger: CTTTGGCTTTGGATGAAAGCAGACATGGTGTCCGAG...TTTCTTGTAGTACTGGAGATTAAACCTGGATCTCTTGTGTGCTAGGCAGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS GCA 90 bp | CTTGAGCCCCACTGTCCACGAAGGCTCTCACGATCGCAGCCCCGATaGCCCGGCTGCCTCCAGTCACCACCACCACCTTCCCAGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: LEPHCPRRLSRSQPR*PGCLQSPPPPSQNI Trigger: GATATTCTGGGAAGGTGGTGGTGGTGACTGGAGGCAGCCGGGGCATCGGGGCTGCGATCGTGAGAGCCTTCGTGGACAGTGGGGCTCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210300.2 |
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| CDS GCA 90 bp | CACTGTCCACGAAGGCTCTCACGATCGCAGCCCCGATGCCCCGGCTaGCTCCAGTCACCACCACCACCTTCCCAGAATATCGGGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: HCPRRLSRSQPRCPG*LQSPPPPSQNIGLL Trigger: CAGTAACCCGATATTCTGGGAAGGTGGTGGTGGTGACTGGAGGCAGCCGGGGCATCGGGGCTGCGATCGTGAGAGCCTTCGTGGACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210300.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCGCAAAGTCCCTGGGCTAGAGAGGTTAGGAGCAGGGGCAAGGGAAGTCCCTGGGGTCTGAAGTaGAGGCTGCAAGCTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGAQSPWAREVRSRGKGSPWGLK*RLQALP Trigger: GGGAAGAGCTTGCAGCCTCAACTTCAGACCCCAGGG...ACTTCCCTTGCCCCTGCTCCTAACCTCTCTAGCCCAGGGACTTTGCGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CAA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGCCCTGGGGTCTGAAGTaGAGGCTGCAAGCTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWSRTHRDLPPECITARLPWGLK*RLQALP Trigger: GGGAAGAGCTTGCAGCCTCAACTTCAGACCCCAGGG...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCGCAAAGTCCCTGGGCTAGAGAGGTTAGGAGCAGGGGCAAGGGAAGTGTCACAGAAAACCACTaGAGCCCCACTGTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGAQSPWAREVRSRGKGSVTENH*SPTVHC Trigger: GCAGTGGACAGTGGGGCTCAAGTGGTTTTCTGTGAC...ACTTCCCTTGCCCCTGCTCCTAACCTCTCTAGCCCAGGGACTTTGCGCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000210997.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGGTCACAGAAAACCACTaGAGCCCCACTGTCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: GWSRTHRDLPPECITARLVTENH*SPTVHE Trigger: TTCGTGGACAGTGGGGCTCAAGTGGTTTTCTGTGAC...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGTGGGAGAGCCCCTGCCTAGAATCCTCCAGTGGGGCACTGGAGTGTGACCCTGGGGAGATGCAGTaGACTCGGACACCATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKWESPCLESSSGALECDPGEMQ*TRTPCL Trigger: CAGACATGGTGTCCGAGTCAACTGCATCTCCCCAGG...GTCACACTCCAGTGCCCCACTGGAGGATTCTAGGCAGGGGCTCTCCCACTTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CAA 90 bp | GGCTGGTCTCGAACTCACAGAGATCTGCCTCCTGAGTGCATCACCGCCCGGCTGACCAAGCTGGAGATGTaGATGATGTTCCCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GWSRTHRDLPPECITARLTKLEM*MMFPLL Trigger: GAGCAGAGGGAACATCATCAACATCTCCAGCTTGGT...CAGCCGGGCGGTGATGCACTCAGGAGGCAGATCTCTGTGAGTTCGAGACCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210300.2 |
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| CDS-3UTR CAA 90 bp | ATAGGAATCAAGCTGCGGGGAGGGGCGCAAAGTCCCTGGGCTAGAGAGGTTAGGGTCACAGAAAACCACTaGAGCCCCACTGTCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: IGIKLRGGAQSPWAREVRVTENH*SPTVHE Trigger: TTCGTGGACAGTGGGGCTCAAGTGGTTTTCTGTGAC...CCTAACCTCTCTAGCCCAGGGACTTTGCGCCCCTCCCCGCAGCTTGATTCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACATTCATCACCAAGCTGGAGATGTaGATGATGTTCCCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RERASGPRKEPRANSTFITKLEM*MMFPLL Trigger: GAGCAGAGGGAACATCATCAACATCTCCAGCTTGGT...GATGAATGTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS-3UTR CAA 90 bp | GAAGAGAGAGGGCAAGTGGACCAAGAAAGGAGCCAAGGGCGAACAGCACATTCATCCAAAGCCAAAGCTTaGGTCATGGCAGTCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EERGQVDQERSQGRTAHSSKAKA*VMAVTA Trigger: TGCAGTGACTGCCATGACCAAAGCTTTGGCTTTGGA...TGAATGTGCTGTTCGCCCTTGGCTCCTTTCTTGGTCCACTTGCCCTCTCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107752.12 |
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| CDS GCA 72 bp | CACTGTCCACGAAGGCTCTCACGATCGCAGCCCCGATaGCCCGGCTGCCTCCAGTCACCACCACCACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HCPRRLSRSQPR*PGCLQSPPPPS Trigger: GGAAGGTGGTGGTGGTGACTGGAGGCAGCCGGGGCATCGGGGCTGCGATCGTGAGAGCCTTCGTGGACAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210300.2 |
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| CDS GCA 72 bp | ACGGAAGCCCTGGGCAGAGGTCTCCTCGGGCAGCTGTaGAGGTGGGTGGTAGCCAGCGTTATTCACCACACA | + |
|
Preference number: 6 (lower is better) Translates to: TEALGRGLLGQL*RWVVASVIHHT Trigger: TGTGTGGTGAATAACGCTGGCTACCACCCACCTGCACAGCTGCCCGAGGAGACCTCTGCCCAGGGCTTCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107752.12 ENSMUST00000210300.2 |
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