Pregenerated sensors for HSD17B13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034528Ensembl transcript IDs: ENSMUST00000048118.15, ENSMUST00000112803.3, ENSMUST00000120320.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGCGTTCATaGAGGCATGGTGCAAACACAGCTGAGAGTTCTGTATCTTCATAT | + |
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Preference number: 1 (lower is better) Translates to: EVQSIIIKVGAWQRS*RHGANTAESSVSSY Trigger: ATATGAAGATACAGAACTCTCAGCTGTGTTTGCACCATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR CCA 90 bp | TACATCTACTCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTaGACTGAGCATATACAAACCATCACAGATACTCATATACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: YIYSNRTTPSSSATP*TEHIQTITDTHIPR Trigger: CCTTGGTATATGAGTATCTGTGATGGTTTGTATATGCTCAGTCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGAGTAGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR CCA 90 bp | CAGCCCTTATTTCTTAAGTGTTGTAAATATTTTGGCAGAAGGAGATaGAGTGAAATTCTCTTGGGTTTATACAGTCAGAGTGATGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QPLFLKCCKYFGRRR*SEILLGLYSQSDAA Trigger: AGCTGCATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAAAATATTTACAACACTTAAGAAATAAGGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR CCA 90 bp | AGTGATACATCTACTCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTGGATTTGGCAGAAGGAGATaGAGTGAAATTCTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SDTSTPTGPHLLVVPLPGFGRRR*SEILLG Trigger: ACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAAA...TCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGAGTAGATGTATCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR CCA 90 bp | ATAAAAACACATGGATTGCCTTTTCCCTCCTTTACATATCCATTGCCAGAACCCTTGGCTTCACATCATTaGTGTCCACACGTCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IKTHGLPFPSFTYPLPEPLASHH*CPHVSA Trigger: TGCAGAGACGTGTGGACACCAATGATGTGAAGCCAA...GGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTGTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGCCACTCCCTGGACTGAGCATATACAAACCATCACAGATACTCATATACCAGAAGGAGATGGAGTaGAATTCTCTTGGGTTTATA | + |
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Preference number: 2 (lower is better) Translates to: VVPLPGLSIYKPSQILIYQKEME*NSLGFI Trigger: TATAAACCCAAGAGAATTTCACTCCATCTCCTTCTG...GTATATGAGTATCTGTGATGGTTTGTATATGCTCAGTCCAGGGAGTGGCACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR TCA 90 bp | GAGCATATACAAACCATCACAGATACTCATATACCAAGGCATGGGTACAATGATATGGGTTCTGGGAGTTaGATTCAGGTTGTTAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: EHIQTITDTHIPRHGYNDMGSGS*IQVVRL Trigger: AAGCCTAACAACCTGAATTCAACTCCCAGAACCCAT...ATCATTGTACCCATGCCTTGGTATATGAGTATCTGTGATGGTTTGTATATGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR CAA 90 bp | AAGTGTTGTAAATATTTTGGCAGAAGGAGATGGAGTGAAATTCTCTaGGGTTTATACAGTCAGAGTGATGCAGCTAGCATGATGACATTA | + |
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Preference number: 2 (lower is better) Translates to: KCCKYFGRRRWSEIL*GLYSQSDAASMMTL Trigger: TAATGTCATCATGCTAGCTGCATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAAAATATTTACAACACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR GCA 72 bp | TCCATTATCATCAAGGTGGGAGCATGGCAGCGTTCATaGAGGCATGGTGCAAACACAGCTGAGAGTTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SIIIKVGAWQRS*RHGANTAESSV Trigger: TACAGAACTCTCAGCTGTGTTTGCACCATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR CCA 72 bp | TTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTaGGAGCATGGCAGCGTTCATGCAGGCATGGTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LQVQRFSPLSSR*EHGSVHAGMVQ Trigger: TTGCACCATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTCTGAACCTGTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR CAA 90 bp | AGTGATACATCTACTCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTGGATTCAGGTTGTTAGGCTaGGCAGCAAGTGTCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: SDTSTPTGPHLLVVPLPGFRLLG*AASVFI Trigger: GATGAAGACACTTGCTGCCAAGCCTAACAACCTGAA...TCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGAGTAGATGTATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR CAA 90 bp | GAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGCGTTCATGCAGGCATTGGAGTGAAATTCTCTaGGGTTTATACAGTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: EVQSIIIKVGAWQRSCRHWSEIL*GLYSQS Trigger: ACTCTGACTGTATAAACCCAAGAGAATTTCACTCCA...ATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR CAA 90 bp | AAAAACACATGGATTGCCTTTTCCCTCCTTTACATATCCATTGCCAGAACCCACCTTGGCTTCACATCATaGGTGTCCACACGTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: KNTWIAFSLLYISIARTHLGFTS*VSTRLC Trigger: GCAGAGACGTGTGGACACCAATGATGTGAAGCCAAG...GTGGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| 3UTR TCA 72 bp | TCCCATCTGTCTTCCCATTACATGGGTTCTGGGAGTTaGATTCAGGTTGTTAGGCTTGGCAGCAAGTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: SHLSSHYMGSGS*IQVVRLGSKCL Trigger: AAGACACTTGCTGCCAAGCCTAACAACCTGAATTCAACTCCCAGAACCCATGTAATGGGAAGACAGATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR CCA 72 bp | TCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTaGACTGAGCATATACAAACCATCACAGATACTCAT | + |
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Preference number: 3 (lower is better) Translates to: SNRTTPSSSATP*TEHIQTITDTH Trigger: ATGAGTATCTGTGATGGTTTGTATATGCTCAGTCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR TCA 72 bp | AGGTTGTTAGGCTTGGCAGCAAGTGTCTTCATCTACTaGGCCAACTCACAGGCCAGAGAAAACATTTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: RLLGLAASVFIY*ANSQARENIFS Trigger: GCTAAAAATGTTTTCTCTGGCCTGTGAGTTGGCTCAGTAGATGAAGACACTTGCTGCCAAGCCTAACAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR GCA 72 bp | CACATGGATTGCCTTTTCCCTCCTTTACATATCCATTaGCAGAACCCACTACCAGGAGCTGAGACATCTATA | + |
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Preference number: 3 (lower is better) Translates to: HMDCLFPPLHIH*QNPLPGAETSI Trigger: TATAGATGTCTCAGCTCCTGGTAGTGGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCATGGTGCAAACACAGCTGAGAGTTCTGTATCTTCATATGAAGGCTGCTAGTGTTGTAAATATTTaGGCAGAAGGAGATGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: AGMVQTQLRVLYLHMKAASVVNI*AEGDGV Trigger: CACTCCATCTCCTTCTGCCAAAATATTTACAACACT...AGCAGCCTTCATATGAAGATACAGAACTCTCAGCTGTGTTTGCACCATGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR-3UTR CAA 90 bp | TTTAAACATGTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTACTTGGCTTCACATCATaGGTGTCCACACGTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: FKHVEHLKHVKESCVSPLLGFTS*VSTRLC Trigger: GCAGAGACGTGTGGACACCAATGATGTGAAGCCAAG...TAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCACATGTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| 3UTR CCA 72 bp | ACAATTTCTCTGAATCCCATCTGTCTTCCCATTACATaGGTTCTGGGAGTTGAATTCAGGTTGTTAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TISLNPICLPIT*VLGVEFRLLGL Trigger: CAAGCCTAACAACCTGAATTCAACTCCCAGAACCCATGTAATGGGAAGACAGATGGGATTCAGAGAAATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR TCA 72 bp | TTTACATATCCATTGCCAGAACCCACTACCAGGAGCTaGGACATCTATAAGTATAGGAAACTAGAAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: FTYPLPEPTTRS*DIYKYRKLEGQ Trigger: CTGTCCTTCTAGTTTCCTATACTTATAGATGTCTCAGCTCCTGGTAGTGGGTTCTGGCAATGGATATGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| 3UTR CCA 72 bp | TTTCTTAAGTGTTGTAAATATTTTGGCAGAAGGAGATaGAGTGAAATTCTCTTGGGTTTATACAGTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: FLKCCKYFGRRR*SEILLGLYSQS Trigger: ACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAAAATATTTACAACACTTAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR TCA 90 bp | GAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGCGTTCATGCAGGCATGTGTTTGAGAAAGTCTaGAGAGGGTGTCAAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: EVQSIIIKVGAWQRSCRHVFEKV*RGCQIP Trigger: GGGGATTTGACACCCTCTTCAGACTTTCTCAAACAC...ATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR GCA 90 bp | GTAGTGCCACTCCCTGGACTGAGCATATACAAACCATCACAGATACTCATATACCGGCCCCCAGTTTCCTaGATTTGTCCGCGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VVPLPGLSIYKPSQILIYRPPVS*ICPRFP Trigger: AGGAAACCGCGGACAAATGCAGGAAACTGGGGGCCG...GTATATGAGTATCTGTGATGGTTTGTATATGCTCAGTCCAGGGAGTGGCACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR CCA 90 bp | TGGGTTCTGGGAGTTGAATTCAGGTTGTTAGGCTTGGCAGCAAGTGTCTTCATCGGGTGTCAAATCCCCTaGGATTGGAGTAACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WVLGVEFRLLGLAASVFIGCQIP*DWSNRL Trigger: CAGCCTGTTACTCCAATCCCAGGGGATTTGACACCC...GATGAAGACACTTGCTGCCAAGCCTAACAACCTGAATTCAACTCCCAGAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR TCA 90 bp | GTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGTCTCTGCATGCGAAGAACTTTACCAGTaGCTCCAGGTAGGAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: VSPLNLASHHWCPHVSACEELYQ*LQVGVD Trigger: ATCTACTCCTACCTGGAGTCACTGGTAAAGTTCTTC...GCATGCAGAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR CCA 90 bp | AGTGATACATCTACTCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTGGACAAATCCCCTGGGATTaGAGTAACAGGCTGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SDTSTPTGPHLLVVPLPGQIPWD*SNRLLR Trigger: TCTCAACAGCCTGTTACTCCAATCCCAGGGGATTTG...TCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGAGTAGATGTATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR TCA 90 bp | GAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGCGTTCATGCAGGCATTGGAGCAATAAGGGATaGGATAAGGAATCACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: EVQSIIIKVGAWQRSCRHWSNKG*DKESLH Trigger: ATGGAGTGATTCCTTATCTCATCCCTTATTGCTCCA...ATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR GCA 90 bp | GTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGTCTCTGCATGCCTTTGCAAATTCATATaGAGTCAGCCTGCCTATTCC | + |
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Preference number: 4 (lower is better) Translates to: VSPLNLASHHWCPHVSACLCKFI*SQPAYS Trigger: GGAATAGGCAGGCTGACTGCATATGAATTTGCAAAG...GCATGCAGAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR CCA 90 bp | AAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGCCACTGTGACAATGTaGCCAGAGTTTCTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KESCVSPLNLASHHWCPHATVTM*PEFLLS Trigger: GCTGAGAAGAAACTCTGGCCACATTGTCACAGTGGC...GTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTCTGGGAGTTGAATTCAGGTTGTTAGGCTTGGCAGCAAGTGTCTTCATCGAAGAACTTTACCAGTaGCTCCAGGTAGGAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: WVLGVEFRLLGLAASVFIEELYQ*LQVGVD Trigger: ATCTACTCCTACCTGGAGTCACTGGTAAAGTTCTTC...GATGAAGACACTTGCTGCCAAGCCTAACAACCTGAATTCAACTCCCAGAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR TCA 90 bp | AGTGATACATCTACTCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTGGAGAAGGAGTGCTTTTATaGTCCAAAAATGTCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SDTSTPTGPHLLVVPLPGEGVLL*SKNVRG Trigger: TCCTCGGACATTTTTGGATCATAAAAGCACTCCTTC...TCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGAGTAGATGTATCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR TCA 90 bp | GTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGTCTCTGCATGCCTCTCTTTACCTTATTaGTATCCCATAGAACCAGTC | + |
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Preference number: 4 (lower is better) Translates to: VSPLNLASHHWCPHVSACLSLPY*YPIEPV Trigger: GACTGGTTCTATGGGATATCAATAAGGTAAAGAGAG...GCATGCAGAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120320.8 |
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| CDS-3UTR GCA 90 bp | GAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGCGTTCATGCAGGCATCCCATAGAACCAGTCTaGTTTTCTGCTTTGCAAATT | + |
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Preference number: 4 (lower is better) Translates to: EVQSIIIKVGAWQRSCRHPIEPV*FSALQI Trigger: AATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGG...ATGCCTGCATGAACGCTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR GCA 90 bp | GTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGTCTCTGCATGCCCCATAGAACCAGTCTaGTTTTCTGCTTTGCAAATT | + |
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Preference number: 4 (lower is better) Translates to: VSPLNLASHHWCPHVSACPIEPV*FSALQI Trigger: AATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGG...GCATGCAGAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR CCA 90 bp | ACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGGCCACTGTGACAATGTaGCCAGAGTTTCTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TCERKLCVPSKLGFTSLVATVTM*PEFLLS Trigger: GCTGAGAAGAAACTCTGGCCACATTGTCACAGTGGC...CACCAATGATGTGAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR TCA 90 bp | AAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGAAGAACTTTACCAGTaGCTCCAGGTAGGAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: KESCVSPLNLASHHWCPHEELYQ*LQVGVD Trigger: ATCTACTCCTACCTGGAGTCACTGGTAAAGTTCTTC...GTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR TCA 90 bp | GAAGGAGATGGAGTGAAATTCTCTTGGGTTTATACAGTCAGAGTGATGCAGCTAGTGGGTGCTTGGAACTaGATCCAGGTCCTTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: EGDGVKFSWVYTVRVMQLVGAWN*IQVLFP Trigger: TGGAAAAAGGACCTGGATTCAGTTCCAAGCACCCAC...TAGCTGCATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR GCA 90 bp | CTGCTAGGGTCAAGCCTACATTTTAAACATGTGGAACACTTAAAACATGTGAAACGGCCCCCAGTTTCCTaGATTTGTCCGCGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLGSSLHFKHVEHLKHVKRPPVS*ICPRFP Trigger: AGGAAACCGCGGACAAATGCAGGAAACTGGGGGCCG...TTTCACATGTTTTAAGTGTTCCACATGTTTAAAATGTAGGCTTGACCCTAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112803.3 |
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| CDS-3UTR GCA 90 bp | GTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGTCTCTGCATGCCATCGATGGAAGGAGTaGTTTTATGATCCAAAAATG | + |
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Preference number: 4 (lower is better) Translates to: VSPLNLASHHWCPHVSACHRWKE*FYDPKM Trigger: CATTTTTGGATCATAAAAGCACTCCTTCCATCGATG...GCATGCAGAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR CCA 90 bp | TTGGCAGAAGGAGATGGAGTGAAATTCTCTTGGGTTTATACAGTCAGAGTGATGGCCACTGTGACAATGTaGCCAGAGTTTCTTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LAEGDGVKFSWVYTVRVMATVTM*PEFLLS Trigger: GCTGAGAAGAAACTCTGGCCACATTGTCACAGTGGC...CATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| 3UTR CAA 72 bp | AAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTaGGCTTCACATCATTGGTGTCCACACGTCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KHVKESCVSPLN*ASHHWCPHVSA Trigger: TGCAGAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR GCA 90 bp | ATTACATGGGTTCTGGGAGTTGAATTCAGGTTGTTAGGCTTGGCAGCAAGTGTCCTTTGCAAATTCATATaGAGTCAGCCTGCCTATTCC | + |
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Preference number: 4 (lower is better) Translates to: ITWVLGVEFRLLGLAASVLCKFI*SQPAYS Trigger: GGAATAGGCAGGCTGACTGCATATGAATTTGCAAAG...GACACTTGCTGCCAAGCCTAACAACCTGAATTCAACTCCCAGAACCCATGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR GCA 90 bp | GCTTGGCAGCAAGTGTCTTCATCTACTGAGCCAACTCACAGGCCAGAGAAAACACATCGATGGAAGGAGTaGTTTTATGATCCAAAAATG | + |
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Preference number: 4 (lower is better) Translates to: AWQQVSSSTEPTHRPEKTHRWKE*FYDPKM Trigger: CATTTTTGGATCATAAAAGCACTCCTTCCATCGATG...TGTTTTCTCTGGCCTGTGAGTTGGCTCAGTAGATGAAGACACTTGCTGCCAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS-3UTR GCA 90 bp | AAGCTGTGTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTCCACACGTCTCTTTGTGGCCCACAATTaGTTCAAATTGAATGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KLCVPSKLGFTSLVSTRLFVAHN*FKLNVL Trigger: CAGAACATTCAATTTGAAGCAATTGTGGGCCACAAA...GAGACGTGTGGACACCAATGATGTGAAGCCAAGTTTAGAGGGGACACACAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR TCA 90 bp | ACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCACATCATTGGTGTGGAGCAATAAGGGATaGGATAAGGAATCACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TCERKLCVPSKLGFTSLVWSNKG*DKESLH Trigger: ATGGAGTGATTCCTTATCTCATCCCTTATTGCTCCA...CACCAATGATGTGAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS-3UTR GCA 90 bp | TGGGTTCTGGGAGTTGAATTCAGGTTGTTAGGCTTGGCAGCAAGTGTCTTCATCACCAGTCTGCTTTTCTaGTTTGCAAATTCATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGVEFRLLGLAASVFITSLLF*FANSYA Trigger: TGCATATGAATTTGCAAAGCAGAAAAGCAGACTGGT...GATGAAGACACTTGCTGCCAAGCCTAACAACCTGAATTCAACTCCCAGAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR GCA 90 bp | ATTACATGGGTTCTGGGAGTTGAATTCAGGTTGTTAGGCTTGGCAGCAAGTGTCTCTGCTTTTCTGCTTTaGAAATTCATATGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITWVLGVEFRLLGLAASVSAFLL*KFICSQ Trigger: CTGACTGCATATGAATTTGCAAAGCAGAAAAGCAGA...GACACTTGCTGCCAAGCCTAACAACCTGAATTCAACTCCCAGAACCCATGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR GCA 90 bp | GGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCCCCATAGAACCAGTCTaGTTTTCTGCTTTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: GTLKTCERKLCVPSKLGFPIEPV*FSALQI Trigger: AATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGG...GAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCAGAAGGAGATGGAGTGAAATTCTCTTGGGTTTATACAGTCAGAGTGATGGGATCAGAGAAATATTaGTATAGGATGGAACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAEGDGVKFSWVYTVRVMGSEKY*YRMERR Trigger: TCTTCGTTCCATCCTATATCAATATTTCTCTGATCC...CATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR GCA 90 bp | GTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTACCAGTCTGCTTTTCTaGTTTGCAAATTCATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEHLKHVKESCVSPLNLATSLLF*FANSYA Trigger: TGCATATGAATTTGCAAAGCAGAAAAGCAGACTGGT...AGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR GCA 90 bp | AAACACATGGATTGCCTTTTCCCTCCTTTACATATCCATTGCCAGAACCCACTACATCGATGGAAGGAGTaGTTTTATGATCCAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KHMDCLFPPLHIHCQNPLHRWKE*FYDPKM Trigger: CATTTTTGGATCATAAAAGCACTCCTTCCATCGATG...TAGTGGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| 3UTR CAA 72 bp | AAATATTTTGGCAGAAGGAGATGGAGTGAAATTCTCTaGGGTTTATACAGTCAGAGTGATGCAGCTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KYFGRRRWSEIL*GLYSQSDAASM Trigger: CATGCTAGCTGCATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAAAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR TCA 90 bp | CTGCTAGGGTCAAGCCTACATTTTAAACATGTGGAACACTTAAAACATGTGAAAGAAGGAGTGCTTTTATaGTCCAAAAATGTCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGSSLHFKHVEHLKHVKEGVLL*SKNVRG Trigger: TCCTCGGACATTTTTGGATCATAAAAGCACTCCTTC...TTTCACATGTTTTAAGTGTTCCACATGTTTAAAATGTAGGCTTGACCCTAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAACATGTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTATGGAGCAATAAGGGATaGGATAAGGAATCACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKHVEHLKHVKESCVSPLWSNKG*DKESLH Trigger: ATGGAGTGATTCCTTATCTCATCCCTTATTGCTCCA...TAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCACATGTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAACATGTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTACTTTGCAAATTCATATaGAGTCAGCCTGCCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKHVEHLKHVKESCVSPLLCKFI*SQPAYS Trigger: GGAATAGGCAGGCTGACTGCATATGAATTTGCAAAG...TAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCACATGTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAAACACATGGATTGCCTTTTCCCTCCTTTACATATCCATTGCCAGAACCCACCAGTCTGCTTTTCTaGTTTGCAAATTCATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKTHGLPFPSFTYPLPEPTSLLF*FANSYA Trigger: TGCATATGAATTTGCAAAGCAGAAAAGCAGACTGGT...GGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTAGGGTCAAGCCTACATTTTAAACATGTGGAACACTTAAAACATGTGAAAGGATCAGAGAAATATTaGTATAGGATGGAACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGSSLHFKHVEHLKHVKGSEKY*YRMERR Trigger: TCTTCGTTCCATCCTATATCAATATTTCTCTGATCC...TTTCACATGTTTTAAGTGTTCCACATGTTTAAAATGTAGGCTTGACCCTAGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAACATGTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTATCTGCTTTTCTGCTTTaGAAATTCATATGCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKHVEHLKHVKESCVSPLSAFLL*KFICSQ Trigger: CTGACTGCATATGAATTTGCAAAGCAGAAAAGCAGA...TAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCACATGTTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS GCA 90 bp | GTCAGCCTGCCTATTCCGTGTCCGGCCCCCGTGATGAGAACGGTCTaGCCGGTCACAGATTTCCTTCTCCGGGGAATGAAGAACTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: VSLPIPCPAPVMRTV*PVTDFLLRGMKNFT Trigger: GGTAAAGTTCTTCATTCCCCGGAGAAGGAAATCTGTGACCGGGCAGACCGTTCTCATCACGGGGGCCGGACACGGAATAGGCAGGCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CCA 90 bp | TTGGTGAAGCCAGTATTCACGAACACAGGGCAGAGACACGAGGTTTaGATACCGGTTTTCCCCAAGGTGTCCAGTTCTGCGGTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVKPVFTNTGQRHEV*IPVFPKVSSSAVSA Trigger: AGCACTGACCGCAGAACTGGACACCTTGGGGAAAACCGGTATCCAAACCTCGTGTCTCTGCCCTGTGTTCGTGAATACTGGCTTCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS TCA 90 bp | CCCGGTCACAGATTTCCTTCTCCGGGGAATGAAGAACTTTACCAGTaGCTCCAGGTAGGAGTAGATGATGACGCCCACCAGAAGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGHRFPSPGNEELYQ*LQVGVDDDAHQKEK Trigger: TTTCTCCTTCTGGTGGGCGTCATCATCTACTCCTACCTGGAGTCACTGGTAAAGTTCTTCATTCCCCGGAGAAGGAAATCTGTGACCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS TCA 90 bp | CTTCCGGCTCTAATACAGGCCATAACCTTGTACTCGGGTTTTTGGTaGAGCCAGTATTCACGAACACAGGGCAGAGACACGAGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPALIQAITLYSGFW*SQYSRTQGRDTRFG Trigger: TCCAAACCTCGTGTCTCTGCCCTGTGTTCGTGAATACTGGCTTCACCAAAAACCCGAGTACAAGGTTATGGCCTGTATTAGAGCCGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATACATCTACTCCAACAGGACCACACCTTCTAGTAGTGCCACTCCCTGGATTGACCTCAAAGGTCTaGGTGATCTCCTCGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDTSTPTGPHLLVVPLPGLTSKV*VISSSL Trigger: CAAGGACGAGGAGATCACCAAGACCTTTGAGGTCAA...TCCAGGGAGTGGCACTACTAGAAGGTGTGGTCCTGTTGGAGTAGATGTATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTGAATCCCATCTGTCTTCCCATTACATGGGTTCTGGGAGTTGAATTCCCACCATGTGGGTGCTaGGAACTGAATCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLNPICLPITWVLGVEFPPCGC*ELNPGP Trigger: AGGACCTGGATTCAGTTCCAAGCACCCACATGGTGG...GAATTCAACTCCCAGAACCCATGTAATGGGAAGACAGATGGGATTCAGAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCAGCAAGTGTCTTCATCTACTGAGCCAACTCACAGGCCAGAGAAAACAGTCTGCTTTTCTGCTTaGCAAATTCATATGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AWQQVSSSTEPTHRPEKTVCFSA*QIHMQS Trigger: TGACTGCATATGAATTTGCAAAGCAGAAAAGCAGAC...TGTTTTCTCTGGCCTGTGAGTTGGCTCAGTAGATGAAGACACTTGCTGCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR CAA 90 bp | GGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCTTGACCTCAAAGGTCTaGGTGATCTCCTCGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTLKTCERKLCVPSKLGFLTSKV*VISSSL Trigger: CAAGGACGAGGAGATCACCAAGACCTTTGAGGTCAA...GAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS TCA 90 bp | CCAGTTTCCTGCATTTGTCCGCGGTTTCCTCAACACCACGCTTATTaGTATCCCATAGAACCAGTCTGCTTTTCTGCTTTGCAAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PVSCICPRFPQHHAY*YPIEPVCFSALQIH Trigger: ATGAATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGGATATCAATAAGCGTGGTGTTGAGGAAACCGCGGACAAATGCAGGAAACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 |
||
| CDS-3UTR CAA 90 bp | TTGGCAGAAGGAGATGGAGTGAAATTCTCTTGGGTTTATACAGTCAGAGTGATGCTTGTACTCGGGTTTTaGGTGAAGCCAGTATTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LAEGDGVKFSWVYTVRVMLVLGF*VKPVFT Trigger: CGTGAATACTGGCTTCACCAAAAACCCGAGTACAAG...CATCACTCTGACTGTATAAACCCAAGAGAATTTCACTCCATCTCCTTCTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR CAA 90 bp | AAAAACACATGGATTGCCTTTTCCCTCCTTTACATATCCATTGCCAGAACCCACCTTGTACTCGGGTTTTaGGTGAAGCCAGTATTCACG | + |
|
Preference number: 5 (lower is better) Translates to: KNTWIAFSLLYISIARTHLVLGF*VKPVFT Trigger: CGTGAATACTGGCTTCACCAAAAACCCGAGTACAAG...GTGGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAAACACATGGATTGCCTTTTCCCTCCTTTACATATCCATTGCCAGAACCCCTTGTACTCGGGTTTTaGGTGAAGCCAGTATTCACG | + |
|
Preference number: 5 (lower is better) Translates to: IKTHGLPFPSFTYPLPEPLVLGF*VKPVFT Trigger: CGTGAATACTGGCTTCACCAAAAACCCGAGTACAAG...GGGTTCTGGCAATGGATATGTAAAGGAGGGAAAAGGCAATCCATGTGTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTGTCTGCTTTTCTGCTTaGCAAATTCATATGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VEHLKHVKESCVSPLNLAVCFSA*QIHMQS Trigger: TGACTGCATATGAATTTGCAAAGCAGAAAAGCAGAC...AGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR CAA 90 bp | GGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTCGTCTGCTTTTCTGCTTaGCAAATTCATATGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLKTCERKLCVPSKLGFVCFSA*QIHMQS Trigger: TGACTGCATATGAATTTGCAAAGCAGAAAAGCAGAC...GAAGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTGAATCCCATCTGTCTTCCCATTACATGGGTTCTGGGAGTTGAATTCTTGGTAAGTATTCCATaGATCAGACTCCTTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: ISLNPICLPITWVLGVEFLVSIP*IRLLAT Trigger: AGTTGCAAGGAGTCTGATCAATGGAATACTTACCAA...GAATTCAACTCCCAGAACCCATGTAATGGGAAGACAGATGGGATTCAGAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS-3UTR CAA 90 bp | GTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGCTTTGGTAAGTATTCCATaGATCAGACTCCTTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VEHLKHVKESCVSPLNLALVSIP*IRLLAT Trigger: AGTTGCAAGGAGTCTGATCAATGGAATACTTACCAA...AGCCAAGTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS TCA 90 bp | TGTTTACCACGATCTCGACATCACCTACTTCTCTCTTTACCTTATTaGTATCCCATAGAACCAGTCTGCTTTTCTGCTTTGCAAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLPRSRHHLLLSLPY*YPIEPVCFSALQIH Trigger: ATGAATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGGATATCAATAAGGTAAAGAGAGAAGTAGGTGATGTCGAGATCGTGGTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120320.8 |
||
| CDS-3UTR CAA 90 bp | AAACATGTGGAACACTTAAAACATGTGAAAGAAAGCTGTGTGTCCCCTCTAAACTTGGTAAGTATTCCATaGATCAGACTCCTTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: KHVEHLKHVKESCVSPLNLVSIP*IRLLAT Trigger: AGTTGCAAGGAGTCTGATCAATGGAATACTTACCAA...GTTTAGAGGGGACACACAGCTTTCTTTCACATGTTTTAAGTGTTCCACATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CCA 90 bp | GAATCCAGGTCCTTTTTCCAGGATCAGAGAAATATTGATATAGGATaGAACGAAGATCATTTTCTTGTTGGTAAGTATTCCATTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRSFFQDQRNIDIG*NEDHFLVGKYSIDQ Trigger: CTGATCAATGGAATACTTACCAACAAGAAAATGATCTTCGTTCCATCCTATATCAATATTTCTCTGATCCTGGAAAAAGGACCTGGATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS GCA 72 bp | ATCTCGGCCCGGTTGCTGCAGTCCACCACAAACACGTaGACGACGGCCCCCAGTTTCCTGCATTTGTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ISARLLQSTTNT*TTAPSFLHLSA Trigger: CGCGGACAAATGCAGGAAACTGGGGGCCGTCGTGCACGTGTTTGTGGTGGACTGCAGCAACCGGGCCGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 |
||
| CDS GCA 72 bp | CCTATTCCGTGTCCGGCCCCCGTGATGAGAACGGTCTaGCCGGTCACAGATTTCCTTCTCCGGGGAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PIPCPAPVMRTV*PVTDFLLRGMK Trigger: CTTCATTCCCCGGAGAAGGAAATCTGTGACCGGGCAGACCGTTCTCATCACGGGGGCCGGACACGGAATAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS GCA 72 bp | CCACCACAAACACGTGCACGACGGCCCCCAGTTTCCTaGATTTGTCCGCGGTTTCCTCAACACCACGCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PPQTRARRPPVS*ICPRFPQHHAY Trigger: ATAAGCGTGGTGTTGAGGAAACCGCGGACAAATGCAGGAAACTGGGGGCCGTCGTGCACGTGTTTGTGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 |
||
| CDS CCA 72 bp | ACTCCATGGCCGCACACCGAAGCCACTGTGACAATGTaGCCAGAGTTTCTTCTCAGCATCGATGGAAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TPWPHTEATVTM*PEFLLSIDGRS Trigger: ACTCCTTCCATCGATGCTGAGAAGAAACTCTGGCCACATTGTCACAGTGGCTTCGGTGTGCGGCCATGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CAA 72 bp | GCCAGTATTCACGAACACAGGGCAGAGACACGAGGTTaGGATACCGGTTTTCCCCAAGGTGTCCAGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASIHEHRAETRG*DTGFPQGVQFC Trigger: GCAGAACTGGACACCTTGGGGAAAACCGGTATCCAAACCTCGTGTCTCTGCCCTGTGTTCGTGAATACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CAA 90 bp | TTTGGTGAAGCCAGTATTCACGAACACAGGGCAGAGACACGAGGTTaGGATACCGGTTTTCCCCAAGGTGTCCAGTTCTGCGGTCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FGEASIHEHRAETRG*DTGFPQGVQFCGQC Trigger: GCACTGACCGCAGAACTGGACACCTTGGGGAAAACCGGTATCCAAACCTCGTGTCTCTGCCCTGTGTTCGTGAATACTGGCTTCACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS TCA 72 bp | CGGTCTGCCCGGTCACAGATTTCCTTCTCCGGGGAATaGAGAACTTTACCAGTGACTCCAGGTAGGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSARSQISFSGE*RTLPVTPGRSR Trigger: TCTACTCCTACCTGGAGTCACTGGTAAAGTTCTTCATTCCCCGGAGAAGGAAATCTGTGACCGGGCAGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CAA 72 bp | GGGTGTCAAATCCCCTGGGATTGGAGTAACAGGCTGTaGAGAACCACCATGTGGGTGCTTGGAACTGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: GCQIPWDWSNRL*RTTMWVLGTES Trigger: GGATTCAGTTCCAAGCACCCACATGGTGGTTCTCAACAGCCTGTTACTCCAATCCCAGGGGATTTGACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
||
| CDS CAA 90 bp | TGTCCGAGGATATTGACCTCAAAGGTCTTGGTGATCTCCTCGTCCTaGGCACTAAGAAGGTCTGCTGGATATATCGCCCCGGCGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CPRILTSKVLVISSS*ALRRSAGYIAPALF Trigger: AAACAACGCCGGGGCGATATATCCAGCAGACCTTCTTAGTGCCAAGGACGAGGAGATCACCAAGACCTTTGAGGTCAATATCCTCGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CAA 72 bp | ATATTGACCTCAAAGGTCTTGGTGATCTCCTCGTCCTaGGCACTAAGAAGGTCTGCTGGATATATCGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ILTSKVLVISSS*ALRRSAGYIAP Trigger: CGGGGCGATATATCCAGCAGACCTTCTTAGTGCCAAGGACGAGGAGATCACCAAGACCTTTGAGGTCAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CAA 90 bp | ACTTCTTCCGGCTCTAATACAGGCCATAACCTTGTACTCGGGTTTTaGGTGAAGCCAGTATTCACGAACACAGGGCAGAGACACGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TSSGSNTGHNLVLGF*VKPVFTNTGQRHEV Trigger: AACCTCGTGTCTCTGCCCTGTGTTCGTGAATACTGGCTTCACCAAAAACCCGAGTACAAGGTTATGGCCTGTATTAGAGCCGGAAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS TCA 72 bp | CTAATACAGGCCATAACCTTGTACTCGGGTTTTTGGTaGAGCCAGTATTCACGAACACAGGGCAGAGACACG | + |
|
Preference number: 6 (lower is better) Translates to: LIQAITLYSGFW*SQYSRTQGRDT Trigger: CGTGTCTCTGCCCTGTGTTCGTGAATACTGGCTTCACCAAAAACCCGAGTACAAGGTTATGGCCTGTATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
||
| CDS CAA 72 bp | GGCTCTAATACAGGCCATAACCTTGTACTCGGGTTTTaGGTGAAGCCAGTATTCACGAACACAGGGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GSNTGHNLVLGF*VKPVFTNTGQR Trigger: TCTCTGCCCTGTGTTCGTGAATACTGGCTTCACCAAAAACCCGAGTACAAGGTTATGGCCTGTATTAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS TCA 72 bp | CAGGCTGTTGAGAACCACCATGTGGGTGCTTGGAACTaGATCCAGGTCCTTTTTCCAGGATCAGAGAAATAT | + |
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Preference number: 6 (lower is better) Translates to: QAVENHHVGAWN*IQVLFPGSEKY Trigger: ATATTTCTCTGATCCTGGAAAAAGGACCTGGATTCAGTTCCAAGCACCCACATGGTGGTTCTCAACAGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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| CDS CAA 90 bp | CCCAGTTTCCTGCATTTGTCCGCGGTTTCCTCAACACCACGCTTATaGATATCCCATAGAACCAGTCTGCTTTTCTGCTTTGCAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: PSFLHLSAVSSTPRL*ISHRTSLLFCFANS Trigger: TGAATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGGATATCAATAAGCGTGGTGTTGAGGAAACCGCGGACAAATGCAGGAAACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 |
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| CDS CAA 72 bp | CTGCATTTGTCCGCGGTTTCCTCAACACCACGCTTATaGATATCCCATAGAACCAGTCTGCTTTTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LHLSAVSSTPRL*ISHRTSLLFCF Trigger: AAAGCAGAAAAGCAGACTGGTTCTATGGGATATCAATAAGCGTGGTGTTGAGGAAACCGCGGACAAATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 |
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| CDS CAA 72 bp | ATCCAAAAATGTCCGAGGATATTGACCTCAAAGGTCTaGGTGATCTCCTCGTCCTTGGCACTAAGAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IQKCPRILTSKV*VISSSLALRRS Trigger: AGACCTTCTTAGTGCCAAGGACGAGGAGATCACCAAGACCTTTGAGGTCAATATCCTCGGACATTTTTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS CCA 72 bp | TGTGACAATGTGGCCAGAGTTTCTTCTCAGCATCGATaGAAGGAGTGCTTTTATGATCCAAAAATGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: CDNVARVSSQHR*KECFYDPKMSE Trigger: CTCGGACATTTTTGGATCATAAAAGCACTCCTTCCATCGATGCTGAGAAGAAACTCTGGCCACATTGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS CAA 72 bp | GGAACGAAGATCATTTTCTTGTTGGTAAGTATTCCATaGATCAGACTCCTTGCAACTTCTTCCGGCTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: GTKIIFLLVSIP*IRLLATSSGSN Trigger: ATTAGAGCCGGAAGAAGTTGCAAGGAGTCTGATCAATGGAATACTTACCAACAAGAAAATGATCTTCGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048118.15 ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS CAA 72 bp | ACGATCTCGACATCACCTACTTCTCTCTTTACCTTATaGATATCCCATAGAACCAGTCTGCTTTTCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: TISTSPTSLFTL*ISHRTSLLFCF Trigger: AAAGCAGAAAAGCAGACTGGTTCTATGGGATATCAATAAGGTAAAGAGAGAAGTAGGTGATGTCGAGATCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120320.8 |
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| CDS CAA 90 bp | TTGTTTACCACGATCTCGACATCACCTACTTCTCTCTTTACCTTATaGATATCCCATAGAACCAGTCTGCTTTTCTGCTTTGCAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: LFTTISTSPTSLFTL*ISHRTSLLFCFANS Trigger: TGAATTTGCAAAGCAGAAAAGCAGACTGGTTCTATGGGATATCAATAAGGTAAAGAGAGAAGTAGGTGATGTCGAGATCGTGGTAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120320.8 |
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| CDS TCA 72 bp | CCACAATTGCTTCAAATTGAATGTTCTGTATACGACTaGTCGCTTTTAAGGCACGCTCAGGAAGAAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: PQLLQIECSVYD*SLLRHAQEETF Trigger: AAAAGTTTCTTCCTGAGCGTGCCTTAAAAGCGATCAGTCGTATACAGAACATTCAATTTGAAGCAATTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112803.3 ENSMUST00000120320.8 |
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| CDS CCA 72 bp | TCCTTTTTCCAGGATCAGAGAAATATTGATATAGGATaGAACGAAGATCATTTTCTTGTTGGTAAGTATTCC | + |
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Preference number: 6 (lower is better) Translates to: SFFQDQRNIDIG*NEDHFLVGKYS Trigger: GGAATACTTACCAACAAGAAAATGATCTTCGTTCCATCCTATATCAATATTTCTCTGATCCTGGAAAAAGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048118.15 |
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