Pregenerated sensors for HSD17B10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025260Ensembl transcript IDs: ENSMUST00000026289.10, ENSMUST00000112617.4
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTaGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTC | + |
Preference number: 1 (lower is better) Translates to: ENLLGTEGEWSRVTK*LLAFLQIEKELVFL Trigger: GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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3UTR-3UTR CCA 90 bp | AATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTAAATTGAAAAGGAGCTaGTGTTTCTCCTGCCTTGGC | + |
Preference number: 2 (lower is better) Translates to: NLLGTEGEWSRVTKWLLAKLKRS*CFSCLG Trigger: GCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTT...AGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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3UTR CCA 72 bp | TTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTaGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: LGTEGEWSRVTK*LLAFLQIEKEL Trigger: CAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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3UTR CCA 72 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTaGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCCTT | + |
Preference number: 3 (lower is better) Translates to: WKFENLLGTEGE*SRVTKWLLAFL Trigger: AAGGAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCGGTCACCTAGTCGGCTaGGGAAGGGTACCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFGHLVG*GRVPGW Trigger: CCAGCCAGGTACCCTTCCCCAGCCGACTAGGTGACC...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCGGTCACCTAGTCGGCTaGGGAAGGGTACCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: LLAFLQIEKELVFLLPWPGHLVG*GRVPGW Trigger: CCAGCCAGGTACCCTTCCCCAGCCGACTAGGTGACC...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTACCACGTTGGCCTCCCTaGTCTGGTTCATTCTGGCCC | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLPRWPP*SGSFWP Trigger: GGGCCAGAATGAACCAGACCAGGGAGGCCAACGTGG...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCGCAGCTTGTCCAACCTaGCCCTCAAAGGCAGCCACA | + |
Preference number: 4 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFAACPT*PSKAAT Trigger: TGTGGCTGCCTTTGAGGGCCAGGTTGGACAAGCTGC...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR TCA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCCCCCATCCAGCCGGATaGCCTCTCCATTCAAGAATG | + |
Preference number: 4 (lower is better) Translates to: LLAFLQIEKELVFLLPWPPHPAG*PLHSRM Trigger: CATTCTTGAATGGAGAGGTCATCCGGCTGGATGGGG...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTACCAGAAGTACAGCTGTaGCCCCTTGTCCCACCAGTC | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLPEVQL*PLVPPV Trigger: GACTGGTGGGACAAGGGGCCACAGCTGTACTTCTGG...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCTGGTCTGGTTCATTCTaGCCCATCTCCCCAGCAACC | + |
Preference number: 4 (lower is better) Translates to: LLAFLQIEKELVFLLPWPWSGSF*PISPAT Trigger: GGTTGCTGGGGAGATGGGCCAGAATGAACCAGACCA...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGCCACGTTGGCCTCCCTaGTCTGGTTCATTCTGGCCC | + |
Preference number: 4 (lower is better) Translates to: WKFENLLGTEGEWSRVTKPRWPP*SGSFWP Trigger: GGGCCAGAATGAACCAGACCAGGGAGGCCAACGTGG...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTCTGGGGAAGGGTACCTaGCTGGCCAAGAAGTTTCGC | + |
Preference number: 4 (lower is better) Translates to: NLLGTEGEWSRVTKWLLALGKGT*LAKKFR Trigger: GCGAAACTTCTTGGCCAGCCAGGTACCCTTCCCCAG...AGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCGGCCACTGCAATACCTaGACAGTTGACAGCCACATC | + |
Preference number: 4 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFGHCNT*TVDSHI Trigger: GATGTGGCTGTCAACTGTGCAGGTATTGCAGTGGCC...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTACAATGGGCAGTGTCATaGCCACTATGCCCCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLQWAVS*PLCPLW Trigger: CCAAAGGGGGCATAGTGGGCATGACACTGCCCATTG...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGCCAGAAGTACAGCTGTaGCCCCTTGTCCCACCAGTC | + |
Preference number: 4 (lower is better) Translates to: WKFENLLGTEGEWSRVTKPEVQL*PLVPPV Trigger: GACTGGTGGGACAAGGGGCCACAGCTGTACTTCTGG...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTGGTCTGGTTCATTCTaGCCCATCTCCCCAGCAACC | + |
Preference number: 4 (lower is better) Translates to: NLLGTEGEWSRVTKWLLAWSGSF*PISPAT Trigger: GGTTGCTGGGGAGATGGGCCAGAATGAACCAGACCA...AGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTGCAGCTTGTCCAACCTaGCCCTCAAAGGCAGCCACA | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPAACPT*PSKAAT Trigger: TGTGGCTGCCTTTGAGGGCCAGGTTGGACAAGCTGC...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCGGAAGGGTACCTGGCTaGCCAAGAAGTTTCGCACTT | + |
Preference number: 4 (lower is better) Translates to: LLAFLQIEKELVFLLPWPGRVPG*PRSFAL Trigger: AAGTGCGAAACTTCTTGGCCAGCCAGGTACCCTTCC...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCTATGCCCCCTTTGGATaGAGAGTATGCAGCTTGTCC | + |
Preference number: 4 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFYAPFG*RVCSLS Trigger: GGACAAGCTGCATACTCTGCATCCAAAGGGGGCATA...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCCCTAACTTCTTGGCTTaGGCTTCACCCTCTGAGTCA | + |
Preference number: 4 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFPNFLA*ASPSES Trigger: TGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGG...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCATGATAACTCCACGTTaGCCTCCCTGGTCTGGTTCA | + |
Preference number: 4 (lower is better) Translates to: LLAFLQIEKELVFLLPWPMITPR*PPWSGS Trigger: TGAACCAGACCAGGGAGGCCAACGTGGAGTTATCAT...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGCCAGATCTCGAGCAATaGGCAGTGTCATGCCCACTA | + |
Preference number: 4 (lower is better) Translates to: FENLLGTEGEWSRVTKWLPDLEQ*AVSCPL Trigger: TAGTGGGCATGACACTGCCCATTGCTCGAGATCTGG...CAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAAAGGGTGGTAAGCAGTaGGGTGGCAAACAAACCTGG | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLKGGKQ*GGKQTW Trigger: CCAGGTTTGTTTGCCACCCCACTGCTTACCACCCTT...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR TCA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTTGGGCTTCACCCTCTaGGTCAGGTACATCCAGAAG | + |
Preference number: 4 (lower is better) Translates to: WKFENLLGTEGEWSRVTKLGFTL*VRYIQK Trigger: CTTCTGGATGTACCTGACTCAGAGGGTGAAGCCCAA...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR TCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTTGGGCTTCACCCTCTaGGTCAGGTACATCCAGAAG | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPLGFTL*VRYIQK Trigger: CTTCTGGATGTACCTGACTCAGAGGGTGAAGCCCAA...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR TCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTACAATACCTGCACAGTTaGCAGCCACATCTATACGGC | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLQYLHS*QPHLYG Trigger: GCCGTATAGATGTGGCTGTCAACTGTGCAGGTATTG...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTGGCCACTGCAATACCTaGACAGTTGACAGCCACATC | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPGHCNT*TVDSHI Trigger: GATGTGGCTGTCAACTGTGCAGGTATTGCAGTGGCC...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTACCTAACTTCTTGGCTTaGGCTTCACCCTCTGAGTCA | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLPNFLA*ASPSES Trigger: TGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGG...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTATGATAACTCCACGTTaGCCTCCCTGGTCTGGTTCA | + |
Preference number: 4 (lower is better) Translates to: NLLGTEGEWSRVTKWLLAMITPR*PPWSGS Trigger: TGAACCAGACCAGGGAGGCCAACGTGGAGTTATCAT...AGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGCCACTATGCCCCCTTTaGATGCAGAGTATGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: FENLLGTEGEWSRVTKWLPLCPL*MQSMQL Trigger: AAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGG...CAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTCCAGATCTCGAGCAATaGGCAGTGTCATGCCCACTA | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPPDLEQ*AVSCPL Trigger: TAGTGGGCATGACACTGCCCATTGCTCGAGATCTGG...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCGGTGGCAAACAAACCTaGAGCAATTGTTACCACACG | + |
Preference number: 4 (lower is better) Translates to: LLAFLQIEKELVFLLPWPGGKQT*SNCYHT Trigger: CGTGTGGTAACAATTGCTCCAGGTTTGTTTGCCACC...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTAAGGGTGGTAAGCAGTaGGGTGGCAAACAAACCTGG | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPKGGKQ*GGKQTW Trigger: CCAGGTTTGTTTGCCACCCCACTGCTTACCACCCTT...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGGGGAAGGGTACCTaGCTGGCCAAGAAGTTTCGC | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLLGKGT*LAKKFR Trigger: GCGAAACTTCTTGGCCAGCCAGGTACCCTTCCCCAG...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCAATGGGCAGTGTCATaGCCACTATGCCCCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLQWAVS*PLCPLW Trigger: CCAAAGGGGGCATAGTGGGCATGACACTGCCCATTG...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGCCACTATGCCCCCTTTaGATGCAGAGTATGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: WKFENLLGTEGEWSRVTKPLCPL*MQSMQL Trigger: AAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGG...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGGGTGGCAAACAAACCTaGAGCAATTGTTACCACACG | + |
Preference number: 4 (lower is better) Translates to: WKFENLLGTEGEWSRVTKGGKQT*SNCYHT Trigger: CGTGTGGTAACAATTGCTCCAGGTTTGTTTGCCACC...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR TCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCAATACCTGCACAGTTaGCAGCCACATCTATACGGC | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLQYLHS*QPHLYG Trigger: GCCGTATAGATGTGGCTGTCAACTGTGCAGGTATTG...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTATTGCTGGGGCAAATATaGAGCTTTCTCCTAACTTCT | + |
Preference number: 4 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLLLGQI*SFLLTS Trigger: AGAAGTTAGGAGAAAGCTGCATATTTGCCCCAGCAA...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCTATGCCCCCTTTGGATaGAGAGTATGCAGCTTGTCC | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLYAPFG*RVCSLS Trigger: GGACAAGCTGCATACTCTGCATCCAAAGGGGGCATA...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGATGGGTTCTCGATTATaGTCTGTACCAGATGAGCAT | + |
Preference number: 4 (lower is better) Translates to: FENLLGTEGEWSRVTKWLMGSRL*SVPDEH Trigger: ATGCTCATCTGGTACAGACCATAATCGAGAACCCAT...CAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCTTTCTCCTAACTTCTTaGCTTGGGCTTCACCCTCTG | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLFLLTS*LGLHPL Trigger: CAGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAA...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCATCTTGTTCTTCTTTTaGTGGTATGTCTTAATGGCC | + |
Preference number: 4 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFILFFF*WYVLMA Trigger: GGCCATTAAGACATACCACCAAAAGAAGAACAAGAT...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTATGGGTTCTCGATTATaGTCTGTACCAGATGAGCAT | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPMGSRL*SVPDEH Trigger: ATGCTCATCTGGTACAGACCATAATCGAGAACCCAT...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCTGTCTTAATGGCCACTaGAATACCTGCACAGTTGAC | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLCLNGH*NTCTVD Trigger: GTCAACTGTGCAGGTATTGCAGTGGCCATTAAGACA...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR GCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCTTGCTGGGGCAAATATaGAGCTTTCTCCTAACTTCT | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLLLGQI*SFLLTS Trigger: AGAAGTTAGGAGAAAGCTGCATATTTGCCCCAGCAA...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | AAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTAAGTCCTCCAAAGTATaGATCTTGTTCTTCTTTTGG | + |
Preference number: 4 (lower is better) Translates to: KWLLAFLQIEKELVFLLPKSSKV*ILFFFW Trigger: CCAAAAGAAGAACAAGATCCATACTTTGGAGGACTT...AGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGAAGTCCTCCAAAGTATaGATCTTGTTCTTCTTTTGG | + |
Preference number: 4 (lower is better) Translates to: WKFENLLGTEGEWSRVTKKSSKV*ILFFFW Trigger: CCAAAAGAAGAACAAGATCCATACTTTGGAGGACTT...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CCA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCATCTTGTTCTTCTTTTaGTGGTATGTCTTAATGGCC | + |
Preference number: 4 (lower is better) Translates to: VTKWLLAFLQIEKELVFLILFFF*WYVLMA Trigger: GGCCATTAAGACATACCACCAAAAGAAGAACAAGAT...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | GCAGCCACACTGGCAGTGTTAATGATAACTCCACGTTGGCCTCCCTaGTCTGGTTCATTCTGGCCCATCTCCCCAGCAACCAGGCGGATC | + |
Preference number: 5 (lower is better) Translates to: AATLAVLMITPRWPP*SGSFWPISPATRRI Trigger: GATCCGCCTGGTTGCTGGGGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAACGTGGAGTTATCATTAACACTGCCAGTGTGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | CCAGATCTCGAGCAATGGGCAGTGTCATGCCCACTATGCCCCCTTTaGATGCAGAGTATGCAGCTTGTCCAACCTGGCCCTCAAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: PDLEQWAVSCPLCPL*MQSMQLVQPGPQRQ Trigger: CTGCCTTTGAGGGCCAGGTTGGACAAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGGCATGACACTGCCCATTGCTCGAGATCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | GTGTTAATGATAACTCCACGTTGGCCTCCCTGGTCTGGTTCATTCTaGCCCATCTCCCCAGCAACCAGGCGGATCACATTGAAAGTGCCT | + |
Preference number: 5 (lower is better) Translates to: VLMITPRWPPWSGSF*PISPATRRITLKVP Trigger: AGGCACTTTCAATGTGATCCGCCTGGTTGCTGGGGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAACGTGGAGTTATCATTAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS TCA 90 bp | ACCTCTCCATTCAAGAATGGGTTCTCGATTATGGTCTGTACCAGATaGGCATATTCAGCGGGGTCACCTAGTCGGCTGGGGAAGGGTACC | + |
Preference number: 5 (lower is better) Translates to: TSPFKNGFSIMVCTR*AYSAGSPSRLGKGT Trigger: GGTACCCTTCCCCAGCCGACTAGGTGACCCCGCTGAATATGCTCATCTGGTACAGACCATAATCGAGAACCCATTCTTGAATGGAGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCTACAGCTGTGGCCCCTaGTCCCACCAGTCTTTTGGC | + |
Preference number: 5 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFYSCGP*SHQSFG Trigger: GCCAAAAGACTGGTGGGACAAGGGGCCACAGCTGTA...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | CATTCGAATGGCCCCATCCAGCCGGATGACCTCTCCATTCAAGAATaGGTTCTCGATTATGGTCTGTACCAGATGAGCATATTCAGCGGG | + |
Preference number: 5 (lower is better) Translates to: HSNGPIQPDDLSIQE*VLDYGLYQMSIFSG Trigger: CCCGCTGAATATGCTCATCTGGTACAGACCATAATCGAGAACCCATTCTTGAATGGAGAGGTCATCCGGCTGGATGGGGCCATTCGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCCCCACTATGCCCCCTTaGGATGCAGAGTATGCAGCT | + |
Preference number: 5 (lower is better) Translates to: LLAFLQIEKELVFLLPWPPTMPP*DAEYAA Trigger: AGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGG...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCCCCACTATGCCCCCTTaGGATGCAGAGTATGCAGCT | + |
Preference number: 5 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFPTMPP*DAEYAA Trigger: AGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGG...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | ACATTTGCTGGGGCAAATATGCAGCTTTCTCCTAACTTCTTGGCTTaGGCTTCACCCTCTGAGTCAGGTACATCCAGAAGTACAGCTGTG | + |
Preference number: 5 (lower is better) Translates to: TFAGANMQLSPNFLA*ASPSESGTSRSTAV Trigger: CACAGCTGTACTTCTGGATGTACCTGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAGCTGCATATTTGCCCCAGCAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | AGGTCACATTTGCTGGGGCAAATATGCAGCTTTCTCCTAACTTCTTaGCTTGGGCTTCACCCTCTGAGTCAGGTACATCCAGAAGTACAG | + |
Preference number: 5 (lower is better) Translates to: RSHLLGQICSFLLTS*LGLHPLSQVHPEVQ Trigger: CTGTACTTCTGGATGTACCTGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAGCTGCATATTTGCCCCAGCAAATGTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | TTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGAATGATAACTCCACGTaGGCCTCCCTGGTCTGGTTC | + |
Preference number: 5 (lower is better) Translates to: FENLLGTEGEWSRVTKWLNDNST*ASLVWF Trigger: GAACCAGACCAGGGAGGCCAACGTGGAGTTATCATT...CAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
||
CDS-3UTR CAA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCTACAGCTGTGGCCCCTaGTCCCACCAGTCTTTTGGC | + |
Preference number: 5 (lower is better) Translates to: VTKWLLAFLQIEKELVFLYSCGP*SHQSFG Trigger: GCCAAAAGACTGGTGGGACAAGGGGCCACAGCTGTA...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | TTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGCTTTCTCCTAACTTCTaGGCTTGGGCTTCACCCTCT | + |
Preference number: 5 (lower is better) Translates to: FENLLGTEGEWSRVTKWLLSPNF*AWASPS Trigger: AGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAG...CAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCAATACCTGCACAGTaGACAGCCACATCTATACGG | + |
Preference number: 5 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLAIPAQ*TATSIR Trigger: CCGTATAGATGTGGCTGTCAACTGTGCAGGTATTGC...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | TGGAAGTTTGAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGCAGAGTATGCAGCTaGTCCAACCTGGCCCTCAAA | + |
Preference number: 5 (lower is better) Translates to: WKFENLLGTEGEWSRVTKCRVCS*SNLALK Trigger: TTTGAGGGCCAGGTTGGACAAGCTGCATACTCTGCA...CTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTCAAACTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | TTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTAGCTTTCACCAGGCGGATCACATaGAAAGTGCCTATAAGATTC | + |
Preference number: 5 (lower is better) Translates to: LLGTEGEWSRVTKWLLAFTRRIT*KVPIRF Trigger: GAATCTTATAGGCACTTTCAATGTGATCCGCCTGGT...GAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTTTCTCCTAACTTCTaGGCTTGGGCTTCACCCTCT | + |
Preference number: 5 (lower is better) Translates to: VTKWLLAFLQIEKELVFLLSPNF*AWASPS Trigger: AGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAG...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCGATCTTGTTCTTCTTTaGGTGGTATGTCTTAATGGC | + |
Preference number: 5 (lower is better) Translates to: LLAFLQIEKELVFLLPWPDLVLL*VVCLNG Trigger: GCCATTAAGACATACCACCAAAAGAAGAACAAGATC...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS TCA 90 bp | ACATTGAAAGTGCCTATAAGATTCACCTGGAGGATGGTAGAACCATaGTGTAGGATATTGATAACCCGCTGGAAGTCCTCCAAAGTATGG | + |
Preference number: 5 (lower is better) Translates to: TLKVPIRFTWRMVEP*CRILITRWKSSKVW Trigger: CCATACTTTGGAGGACTTCCAGCGGGTTATCAATATCCTACATCATGGTTCTACCATCCTCCAGGTGAATCTTATAGGCACTTTCAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | CTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCCTGCCTTGGCCCTCCAAAGTATGGATCTaGTTCTTCTTTTGGTGGTAT | + |
Preference number: 5 (lower is better) Translates to: LLAFLQIEKELVFLLPWPSKVWI*FFFWWY Trigger: ATACCACCAAAAGAAGAACAAGATCCATACTTTGGA...GGGCCAAGGCAGGAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | CCTATAAGATTCACATTGATAACCCGCTGGAAGTCCTCCAAAGTATaGATCTTGTTCTTCTTTTGGTGGTATGTCTTAATGGCCACTGCA | + |
Preference number: 5 (lower is better) Translates to: PIRFTLITRWKSSKV*ILFFFWWYVLMATA Trigger: TGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATGTGAATCTTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |
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CDS-3UTR CAA 90 bp | GAGAATTTATTAGGCACCGAGGGTGAGTGGAGCAGAGTTACAAAGTGGCTGTTATCCAAAGTATGGATCTaGTTCTTCTTTTGGTGGTAT | + |
Preference number: 5 (lower is better) Translates to: ENLLGTEGEWSRVTKWLLSKVWI*FFFWWY Trigger: ATACCACCAAAAGAAGAACAAGATCCATACTTTGGA...TAACAGCCACTTTGTAACTCTGCTCCACTCACCCTCGGTGCCTAATAAATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS-3UTR CAA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCACCAGGCGGATCACATaGAAAGTGCCTATAAGATTC | + |
Preference number: 5 (lower is better) Translates to: VTKWLLAFLQIEKELVFLTRRIT*KVPIRF Trigger: GAATCTTATAGGCACTTTCAATGTGATCCGCCTGGT...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 90 bp | CGGATCACATTGAAAGTGCCTATAAGATTCACATTGATAACCCGCTaGAAGTCCTCCAAAGTATGGATCTTGTTCTTCTTTTGGTGGTAT | + |
Preference number: 5 (lower is better) Translates to: RITLKVPIRFTLITR*KSSKVWILFFFWWY Trigger: ATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATGTGAATCTTATAGGCACTTTCAATGTGATCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |
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CDS-3UTR CAA 90 bp | GTTACAAAGTGGCTGTTAGCTTTCCTTCAAATTGAAAAGGAGCTGGTGTTTCTCGATCTTGTTCTTCTTTaGGTGGTATGTCTTAATGGC | + |
Preference number: 5 (lower is better) Translates to: VTKWLLAFLQIEKELVFLDLVLL*VVCLNG Trigger: GCCATTAAGACATACCACCAAAAGAAGAACAAGATC...GAGAAACACCAGCTCCTTTTCAATTTGAAGGAAAGCTAACAGCCACTTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | CGGGGTCACCTAGTCGGCTGGGGAAGGGTACCTGGCTaGCCAAGAAGTTTCGCACTTTCTCTGGAAGGGTGG | + |
Preference number: 6 (lower is better) Translates to: RGHLVGWGRVPG*PRSFALSLEGW Trigger: CCACCCTTCCAGAGAAAGTGCGAAACTTCTTGGCCAGCCAGGTACCCTTCCCCAGCCGACTAGGTGACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | TCAGCGGGGTCACCTAGTCGGCTGGGGAAGGGTACCTaGCTGGCCAAGAAGTTTCGCACTTTCTCTGGAAGG | + |
Preference number: 6 (lower is better) Translates to: SAGSPSRLGKGT*LAKKFRTFSGR Trigger: CCTTCCAGAGAAAGTGCGAAACTTCTTGGCCAGCCAGGTACCCTTCCCCAGCCGACTAGGTGACCCCGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 90 bp | GGTACATCCAGAAGTACAGCTGTGGCCCCTTGTCCCACCAGTCTTTaGGCCGTAGCTAGGCCAAGGCCCGAGGCTCCTCCAGTTACTACC | + |
Preference number: 6 (lower is better) Translates to: GTSRSTAVAPCPTSL*AVARPRPEAPPVTT Trigger: GGTAGTAACTGGAGGAGCCTCGGGCCTTGGCCTAGCTACGGCCAAAAGACTGGTGGGACAAGGGGCCACAGCTGTACTTCTGGATGTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 72 bp | CGAGCAATGGGCAGTGTCATGCCCACTATGCCCCCTTaGGATGCAGAGTATGCAGCTTGTCCAACCTGGCCC | + |
Preference number: 6 (lower is better) Translates to: RAMGSVMPTMPP*DAEYAACPTWP Trigger: GGGCCAGGTTGGACAAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGGCATGACACTGCCCATTGCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 90 bp | GCCAGATCTCGAGCAATGGGCAGTGTCATGCCCACTATGCCCCCTTaGGATGCAGAGTATGCAGCTTGTCCAACCTGGCCCTCAAAGGCA | + |
Preference number: 6 (lower is better) Translates to: ARSRAMGSVMPTMPP*DAEYAACPTWPSKA Trigger: TGCCTTTGAGGGCCAGGTTGGACAAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGGCATGACACTGCCCATTGCTCGAGATCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | GAGCAATGGGCAGTGTCATGCCCACTATGCCCCCTTTaGATGCAGAGTATGCAGCTTGTCCAACCTGGCCCT | + |
Preference number: 6 (lower is better) Translates to: EQWAVSCPLCPL*MQSMQLVQPGP Trigger: AGGGCCAGGTTGGACAAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGGCATGACACTGCCCATTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS GCA 72 bp | CCAGATCTCGAGCAATGGGCAGTGTCATGCCCACTATaGCCCCTTTGGATGCAGAGTATGCAGCTTGTCCAA | + |
Preference number: 6 (lower is better) Translates to: PDLEQWAVSCPL*PLWMQSMQLVQ Trigger: TTGGACAAGCTGCATACTCTGCATCCAAAGGGGGCATAGTGGGCATGACACTGCCCATTGCTCGAGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS TCA 72 bp | TTCAAGAATGGGTTCTCGATTATGGTCTGTACCAGATaGGCATATTCAGCGGGGTCACCTAGTCGGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: FKNGFSIMVCTR*AYSAGSPSRLG Trigger: CCCCAGCCGACTAGGTGACCCCGCTGAATATGCTCATCTGGTACAGACCATAATCGAGAACCCATTCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | GGCCCCATCCAGCCGGATGACCTCTCCATTCAAGAATaGGTTCTCGATTATGGTCTGTACCAGATGAGCATA | + |
Preference number: 6 (lower is better) Translates to: GPIQPDDLSIQE*VLDYGLYQMSI Trigger: TATGCTCATCTGGTACAGACCATAATCGAGAACCCATTCTTGAATGGAGAGGTCATCCGGCTGGATGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 72 bp | TTCTGGCCCATCTCCCCAGCAACCAGGCGGATCACATaGAAAGTGCCTATAAGATTCACCTGGAGGATGGTA | + |
Preference number: 6 (lower is better) Translates to: FWPISPATRRIT*KVPIRFTWRMV Trigger: TACCATCCTCCAGGTGAATCTTATAGGCACTTTCAATGTGATCCGCCTGGTTGCTGGGGAGATGGGCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112617.4 |
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CDS CAA 90 bp | TCTGGTTCATTCTGGCCCATCTCCCCAGCAACCAGGCGGATCACATaGAAAGTGCCTATAAGATTCACATTGATAACCCGCTGGAAGTCC | + |
Preference number: 6 (lower is better) Translates to: SGSFWPISPATRRIT*KVPIRFTLITRWKS Trigger: GGACTTCCAGCGGGTTATCAATGTGAATCTTATAGGCACTTTCAATGTGATCCGCCTGGTTGCTGGGGAGATGGGCCAGAATGAACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |
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CDS CCA 72 bp | GGGGCAAATATGCAGCTTTCTCCTAACTTCTTGGCTTaGGCTTCACCCTCTGAGTCAGGTACATCCAGAAGT | + |
Preference number: 6 (lower is better) Translates to: GANMQLSPNFLA*ASPSESGTSRS Trigger: ACTTCTGGATGTACCTGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAGCTGCATATTTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | TTGCTGGGGCAAATATGCAGCTTTCTCCTAACTTCTTaGCTTGGGCTTCACCCTCTGAGTCAGGTACATCCA | + |
Preference number: 6 (lower is better) Translates to: LLGQICSFLLTS*LGLHPLSQVHP Trigger: TGGATGTACCTGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAGCTGCATATTTGCCCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 72 bp | TTCTGGCCCATCTCCCCAGCAACCAGGCGGATCACATaGAAAGTGCCTATAAGATTCACATTGATAACCCGC | + |
Preference number: 6 (lower is better) Translates to: FWPISPATRRIT*KVPIRFTLITR Trigger: GCGGGTTATCAATGTGAATCTTATAGGCACTTTCAATGTGATCCGCCTGGTTGCTGGGGAGATGGGCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |
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CDS CAA 90 bp | GAGGTCACATTTGCTGGGGCAAATATGCAGCTTTCTCCTAACTTCTaGGCTTGGGCTTCACCCTCTGAGTCAGGTACATCCAGAAGTACA | + |
Preference number: 6 (lower is better) Translates to: EVTFAGANMQLSPNF*AWASPSESGTSRST Trigger: TGTACTTCTGGATGTACCTGACTCAGAGGGTGAAGCCCAAGCCAAGAAGTTAGGAGAAAGCTGCATATTTGCCCCAGCAAATGTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 90 bp | GATAACCCGCTGGAAGTCCTCCAAAGTATGGATCTTGTTCTTCTTTaGGTGGTATGTCTTAATGGCCACTGCAATACCTGCACAGTTGAC | + |
Preference number: 6 (lower is better) Translates to: DNPLEVLQSMDLVLL*VVCLNGHCNTCTVD Trigger: GTCAACTGTGCAGGTATTGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS GCA 72 bp | CTTGTTCTTCTTTTGGTGGTATGTCTTAATGGCCACTaGAATACCTGCACAGTTGACAGCCACATCTATACG | + |
Preference number: 6 (lower is better) Translates to: LVLLLVVCLNGH*NTCTVDSHIYT Trigger: CGTATAGATGTGGCTGTCAACTGTGCAGGTATTGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | AAGTCCTCCAAAGTATGGATCTTGTTCTTCTTTTGGTaGTATGTCTTAATGGCCACTGCAATACCTGCACAG | + |
Preference number: 6 (lower is better) Translates to: KSSKVWILFFFW*YVLMATAIPAQ Trigger: CTGTGCAGGTATTGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CCA 72 bp | TGGAAGTCCTCCAAAGTATGGATCTTGTTCTTCTTTTaGTGGTATGTCTTAATGGCCACTGCAATACCTGCA | + |
Preference number: 6 (lower is better) Translates to: WKSSKVWILFFF*WYVLMATAIPA Trigger: TGCAGGTATTGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 72 bp | TGGTATGTCTTAATGGCCACTGCAATACCTGCACAGTaGACAGCCACATCTATACGGCCAAACTTTTCTTTT | + |
Preference number: 6 (lower is better) Translates to: WYVLMATAIPAQ*TATSIRPNFSF Trigger: AAAAGAAAAGTTTGGCCGTATAGATGTGGCTGTCAACTGTGCAGGTATTGCAGTGGCCATTAAGACATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 72 bp | TTGATAACCCGCTGGAAGTCCTCCAAAGTATGGATCTaGTTCTTCTTTTGGTGGTATGTCTTAATGGCCACT | + |
Preference number: 6 (lower is better) Translates to: LITRWKSSKVWI*FFFWWYVLMAT Trigger: AGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026289.10 ENSMUST00000112617.4 |
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CDS CAA 90 bp | AGATTCACATTGATAACCCGCTGGAAGTCCTCCAAAGTATGGATCTaGTTCTTCTTTTGGTGGTATGTCTTAATGGCCACTGCAATACCT | + |
Preference number: 6 (lower is better) Translates to: RFTLITRWKSSKVWI*FFFWWYVLMATAIP Trigger: AGGTATTGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATGTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |
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CDS CAA 90 bp | TGTAGGATATTGATAACCCGCTGGAAGTCCTCCAAAGTATGGATCTaGTTCTTCTTTTGGTGGTATGTCTTAATGGCCACTGCAATACCT | + |
Preference number: 6 (lower is better) Translates to: CRILITRWKSSKVWI*FFFWWYVLMATAIP Trigger: AGGTATTGCAGTGGCCATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATATCCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112617.4 |
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CDS CCA 72 bp | TTCACATTGATAACCCGCTGGAAGTCCTCCAAAGTATaGATCTTGTTCTTCTTTTGGTGGTATGTCTTAATG | + |
Preference number: 6 (lower is better) Translates to: FTLITRWKSSKV*ILFFFWWYVLM Trigger: CATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |
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CDS CCA 72 bp | AGGATATTGATAACCCGCTGGAAGTCCTCCAAAGTATaGATCTTGTTCTTCTTTTGGTGGTATGTCTTAATG | + |
Preference number: 6 (lower is better) Translates to: RILITRWKSSKV*ILFFFWWYVLM Trigger: CATTAAGACATACCACCAAAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112617.4 |
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CDS CCA 72 bp | TTGAAAGTGCCTATAAGATTCACATTGATAACCCGCTaGAAGTCCTCCAAAGTATGGATCTTGTTCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: LKVPIRFTLITR*KSSKVWILFFF Trigger: AAAGAAGAACAAGATCCATACTTTGGAGGACTTCCAGCGGGTTATCAATGTGAATCTTATAGGCACTTTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026289.10 |