Pregenerated sensors for HSD11B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031891Ensembl transcript IDs: ENSMUST00000034363.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCAGTCAAGAGGCAGTTGGGATTTACTCTGGACTTGCAGCACTaGGACTGTGGGTCCCAAAAGAATTCTGAGGAGGTCCCCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: EPVKRQLGFTLDLQH*DCGSQKNSEEVPTC Trigger: GCAGGTGGGGACCTCCTCAGAATTCTTTTGGGACCCACAGTCTCAGTGCTGCAAGTCCAGAGTAAATCCCAACTGCCTCTTGACTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR GCA 90 bp | ACTCTCCATCCACCTGGGTTTTCCAAGCTGCAGTGTAGAGCATTGTaGCTGGTAGGGTATGTGTGGGCTCAAGAAGCAGAGGAGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: TLHPPGFSKLQCRAL*LVGYVWAQEAEERS Trigger: GGACCTCTCCTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGCTCTACACTGCAGCTTGGAAAACCCAGGTGGATGGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR CCA 90 bp | TTTTCCAAGCTGCAGTGTAGAGCATTGTGCCTGGTAGGGTATGTGTaGGCTCAAGAAGCAGAGGAGAGGTCCAGAGGCTCACTAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: FSKLQCRALCLVGYV*AQEAEERSRGSLAD Trigger: GTCTGCTAGTGAGCCTCTGGACCTCTCCTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGCTCTACACTGCAGCTTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR CCA 90 bp | AAATGCCAACAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTaGGGGCCAGTAATTGAGGACCTAAATCTTGAGCCAGTCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: KCQQPGRYNIQLPCG*GPVIEDLNLEPVKR Trigger: CCTCTTGACTGGCTCAAGATTTAGGTCCTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTGTTGGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR-3UTR GCA 90 bp | GCATTGTGCCTGGTAGGGTATGTGTGGGCTCAAGAAGCAGAGGAGAGGTCCAGATGTGGCTCACAGAGCTaGCACTGGGGAAGGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ALCLVGYVWAQEAEERSRCGSQS*HWGRVC Trigger: ACACACCCTTCCCCAGTGGCAGCTCTGTGAGCCACA...TCTGGACCTCTCCTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGGACAAACACCTAGGTTTGTaGCTCACAGAGCTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: PGRYNIQLPCGWGPVIEDKHLGL*LTELPL Trigger: CAGTGGCAGCTCTGTGAGCCACAAACCTAGGTGTTT...GTCCTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCACCTGCCTAATCATTCTAAAGTTAGCACAGAAATGGTCTGTAGAGTACCAGACTTCCACGTCCTaGGCTGGACGAGGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPTCLIILKLAQKWSVEYQTSTS*AGRGIS Trigger: GCTGATGCCTCGTCCAGCCCAGGACGTGGAAGTCTG...GTACTCTACAGACCATTTCTGTGCTAACTTTAGAATGATTAGGCAGGTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR-3UTR CCA 90 bp | CAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGCAGTCAAGAGGCAGTTaGGATTTACTCTGGACTTGC | + |
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Preference number: 2 (lower is better) Translates to: QPGRYNIQLPCGWGPVIEQSRGS*DLLWTC Trigger: GCAAGTCCAGAGTAAATCCCAACTGCCTCTTGACTG...CTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR CCA 72 bp | CTGCAGTGTAGAGCATTGTGCCTGGTAGGGTATGTGTaGGCTCAAGAAGCAGAGGAGAGGTCCAGAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LQCRALCLVGYV*AQEAEERSRGS Trigger: TGAGCCTCTGGACCTCTCCTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGCTCTACACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR GCA 72 bp | CCACCTGGGTTTTCCAAGCTGCAGTGTAGAGCATTGTaGCTGGTAGGGTATGTGTGGGCTCAAGAAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: PPGFSKLQCRAL*LVGYVWAQEAE Trigger: CTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGCTCTACACTGCAGCTTGGAAAACCCAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR CCA 72 bp | CAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTaGGGGCCAGTAATTGAGGACCTAAATCTTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QPGRYNIQLPCG*GPVIEDLNLEP Trigger: TGGCTCAAGATTTAGGTCCTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR GCA 72 bp | AGCCAGTCAAGAGGCAGTTGGGATTTACTCTGGACTTaGAGCACTGAGACTGTGGGTCCCAAAAGAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: SQSRGSWDLLWT*STETVGPKRIL Trigger: CAGAATTCTTTTGGGACCCACAGTCTCAGTGCTGCAAGTCCAGAGTAAATCCCAACTGCCTCTTGACTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR TCA 72 bp | CTTGCAGCACTGAGACTGTGGGTCCCAAAAGAATTCTaGGGAGGTCCCCACCTGCCTAATCATTCTAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LAALRLWVPKEF*GGPHLPNHSKV Trigger: AACTTTAGAATGATTAGGCAGGTGGGGACCTCCTCAGAATTCTTTTGGGACCCACAGTCTCAGTGCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTTAAAATGCCAACAACCAGGCAGGTACAACATACAGCTTCCATGTGGCCTGCAGTGTAGAGCATaGTGCCTGGTAGGGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: FILKCQQPGRYNIQLPCGLQCRA*CLVGYV Trigger: CACATACCCTACCAGGCACAATGCTCTACACTGCAG...GCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTGTTGGCATTTTAAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR GCA 72 bp | TGTGGGTCCCAAAAGAATTCTGAGGAGGTCCCCACCTaGCTAATCATTCTAAAGTTAGCACAGAAATGGTCT | + |
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Preference number: 3 (lower is better) Translates to: CGSQKNSEEVPT*LIILKLAQKWS Trigger: AGACCATTTCTGTGCTAACTTTAGAATGATTAGGCAGGTGGGGACCTCCTCAGAATTCTTTTGGGACCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR CCA 72 bp | CCCACCTGCCTAATCATTCTAAAGTTAGCACAGAAATaGTCTGTAGAGTACTATCAAAGGCTACAGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PTCLIILKLAQK*SVEYYQRLQPK Trigger: TTTTGGCTGTAGCCTTTGATAGTACTCTACAGACCATTTCTGTGCTAACTTTAGAATGATTAGGCAGGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGGACGACCCCACAGGCCAGTaGTGGCCGTGTGGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGRYNIQLPCGWGPVIEDDPTGQ*WPCGPW Trigger: CCAAGGCCCACACGGCCAGCACTGGCCTGTGGGGTC...GTCCTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | GCATTGTGCCTGGTAGGGTATGTGTGGGCTCAAGAAGCAGAGGAGAGGTCCAGAGGAGCAGGGCCATGTTaGCCGGGCCTCAGTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: ALCLVGYVWAQEAEERSRGAGPC*PGLSAR Trigger: CCGAGCACTGAGGCCCGGCCAACATGGCCCTGCTCC...TCTGGACCTCTCCTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | ATCTTGAGCCAGTCAAGAGGCAGTTGGGATTTACTCTGGACTTGCAGCACTGAGAGCCAGCACCACGAGTaGCGCCGGCGGGGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ILSQSRGSWDLLWTCSTESQHHE*RRRGQQ Trigger: CTGCTGCCCCCGCCGGCGGCACTCGTGGTGCTGGCT...CTCAGTGCTGCAAGTCCAGAGTAAATCCCAACTGCCTCTTGACTGGCTCAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | AGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTCCAAGCTCTGAGCGCAGCAGCTaGAGCAGCGCGCGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RLQPKSYTKLSIHLGFPSSERSS*SSARAA Trigger: GGCTGCCCGCGCGCTGCTGCAGCTGCTGCGCTCAGA...GCTTGGAAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | CAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGGTGGCAGGAGGCCCTTaGTCAGCTCAAGTGCACCAA | + |
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Preference number: 4 (lower is better) Translates to: QPGRYNIQLPCGWGPVIEVAGGP*SAQVHQ Trigger: TTGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCAC...CTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | CAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGGTGCTATTGCTGCCTTaGAGGTGCCGTAGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QPGRYNIQLPCGWGPVIEVLLLP*RCRRLP Trigger: TGGCAGCCTACGGCACCTCCAAGGCAGCAATAGCAC...CTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | CAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGCCAGCAGCAGTTGCTTaGGTTTCTCCCAGAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QPGRYNIQLPCGWGPVIEPAAVA*VSPRGS Trigger: TGAACCTCTGGGAGAAACGCAAGCAACTGCTGCTGG...CTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | AAGAATTCTGAGGAGGTCCCCACCTGCCTAATCATTCTAAAGTTAGCACAGAAAGGGGGCAGCAGGCGCTaGCACAGCCAGTCGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KNSEEVPTCLIILKLAQKGGSRR*HSQSRA Trigger: TGCTCTCGACTGGCTGTGCCAGCGCCTGCTGCCCCC...TTTCTGTGCTAACTTTAGAATGATTAGGCAGGTGGGGACCTCCTCAGAATTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | AACATACAGCTTCCATGTGGCTGGGGGCCAGTAATTGAGGACCTAAATCTTGAGCGAGTGACGCAAGAGTaGCAGGAGGCCCTTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: NIQLPCGWGPVIEDLNLERVTQE*QEALGQ Trigger: CTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCG...CTCAAGATTTAGGTCCTCAATTACTGGCCCCCAGCCACATGGAAGCTGTATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| 3UTR CAA 72 bp | CATCCACCTGGGTTTTCCAAGCTGCAGTGTAGAGCATaGTGCCTGGTAGGGTATGTGTGGGCTCAAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: HPPGFSKLQCRA*CLVGYVWAQEA Trigger: TGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGCTCTACACTGCAGCTTGGAAAACCCAGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | GCATTGTGCCTGGTAGGGTATGTGTGGGCTCAAGAAGCAGAGGAGAGGTCCAGATGTGTCCATAAGCAGTaGTATTGCTGCCTTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: ALCLVGYVWAQEAEERSRCVHKQ*YCCLGG Trigger: ACCTCCAAGGCAGCAATAGCACTGCTTATGGACACA...TCTGGACCTCTCCTCTGCTTCTTGAGCCCACACATACCCTACCAGGCACAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR TCA 90 bp | AGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTCCAAGCCTGTGGCCAGCACCGTaGAGCCCATGGCATCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RLQPKSYTKLSIHLGFPSLWPAP*SPWHPV Trigger: AACTGGATGCCATGGGCTTCACGGTGCTGGCCACAG...GCTTGGAAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | GGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTCCAAGCTGCGTCGCAGGCCCTCTaGCAGGTAGTGGTGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: GYSQNLILNSPSTWVFQAASQAL*QVVVDE Trigger: TTCATCCACCACTACCTGCCAGAGGGCCTGCGACGC...AGCTTGGAAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR TCA 90 bp | ATCTTGAGCCAGTCAAGAGGCAGTTGGGATTTACTCTGGACTTGCAGCACTGAGCAATGCCATTCTGAGTaGATTCAGGAACTGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: ILSQSRGSWDLLWTCSTEQCHSE*IQELPV Trigger: CACGGGCAGTTCCTGAATTCACTCAGAATGGCATTG...CTCAGTGCTGCAAGTCCAGAGTAAATCCCAACTGCCTCTTGACTGGCTCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | GGGCCAGTAATTGAGGACCTAAATCTTGAGCCAGTCAAGAGGCAGTTGGGATTTCTGAGCTGCCAGCAATaGATCGATGATGGCATCTAC | + |
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Preference number: 4 (lower is better) Translates to: GPVIEDLNLEPVKRQLGFLSCQQ*IDDGIY Trigger: GTAGATGCCATCATCGATGCATTGCTGGCAGCTCAG...AAATCCCAACTGCCTCTTGACTGGCTCAAGATTTAGGTCCTCAATTACTGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CCA 90 bp | GTTGGGATTTACTCTGGACTTGCAGCACTGAGACTGTGGGTCCCAAAAGAATTCGATGGCATCTACAACTaGGCTAAGGTCAGGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: VGIYSGLAALRLWVPKEFDGIYN*AKVRQC Trigger: GCATTGCCTGACCTTAGCCCAGTTGTAGATGCCATC...GAATTCTTTTGGGACCCACAGTCTCAGTGCTGCAAGTCCAGAGTAAATCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR TCA 90 bp | AGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTCCAAGCCCAGCAATGCATCGATaGTGGCATCTACAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RLQPKSYTKLSIHLGFPSPAMHR*WHLQLG Trigger: GCCCAGTTGTAGATGCCATCATCGATGCATTGCTGG...GCTTGGAAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | TATCAAAGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTTCACCTCCATGCACTTaGGGAAAGTCGCCACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: YQRLQPKSYTKLSIHLGFSPPCT*GKSPLE Trigger: CTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGA...AAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCTTTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR GCA 90 bp | ATTTTAAAATGCCAACAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTGGCTTGGTCAGCTCAAGTaGACCAAAGAAGTTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: ILKCQQPGRYNIQLPCGWLGQLK*TKEVHL Trigger: GAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAG...CCAGCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTGTTGGCATTTTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | GCCGCCAACAACGGGCGGCCCAGACGCAGGTCTGAGCGCAGCAGCTaGAGCAGCGCGCGGGCAGCCACCAGCAGCCAGGCGCCGCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: AANNGRPRRRSERSS*SSARAATSSQAPPD Trigger: GTCGGGCGGCGCCTGGCTGCTGGTGGCTGCCCGCGCGCTGCTGCAGCTGCTGCGCTCAGACCTGCGTCTGGGCCGCCCGTTGTTGGCGGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 90 bp | GGAGGTGCCGTAGGCTGCCAAGCAGGGGTATGGCATGTCTCCTGCTaGGCTGCCAACGGTCACAATACGTCCCCTCGAGTGACGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: GGAVGCQAGVWHVSC*AANGHNTSPRVTQE Trigger: CTCTTGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGCACCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | TGCCGTAGGCTGCCAAGCAGGGGTATGGCATGTCTCCTGCTGGGCTaGCAACGGTCACAATACGTCCCCTCGAGTGACGCAAGAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: CRRLPSRGMACLLLG*QRSQYVPSSDARVA Trigger: TGCCACTCTTGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | CTTGGAGGTGCCGTAGGCTGCCAAGCAGGGGTATGGCATGTCTCCTaGTGGGCTGCCAACGGTCACAATACGTCCCCTCGAGTGACGCAA | + |
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Preference number: 5 (lower is better) Translates to: LGGAVGCQAGVWHVS*WAANGHNTSPRVTQ Trigger: TTGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGCACCTCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS TCA 90 bp | ATGTCTCCTGCTGGGCTGCCAACGGTCACAATACGTCCCCTCGAGTaGCGCAAGAGTGGCAGGAGGCCCTTGGTCAGCTCAAGTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: MSPAGLPTVTIRPLE*RKSGRRPLVSSSAP Trigger: TGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | TGTGTCCATAAGCAGTGCTATTGCTGCCTTGGAGGTGCCGTAGGCTaGCAAGCAGGGGTATGGCATGTCTCCTGCTGGGCTGCCAACGGT | + |
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Preference number: 5 (lower is better) Translates to: CVHKQCYCCLGGAVG*QAGVWHVSCWAANG Trigger: ACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGCACCTCCAAGGCAGCAATAGCACTGCTTATGGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | GCCACGGCCTGGGTAGTAGCGGCTTCGTGGCTGAGCTGCCAGCAATaGATCGATGATGGCATCTACAACTGGGCTAAGGTCAGGCAATGC | + |
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Preference number: 5 (lower is better) Translates to: ATAWVVAASWLSCQQ*IDDGIYNWAKVRQC Trigger: GCATTGCCTGACCTTAGCCCAGTTGTAGATGCCATCATCGATGCATTGCTGGCAGCTCAGCCACGAAGCCGCTACTACCCAGGCCGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | GGCCGTGTGGGCCTTGGTGATTTCCAGAACACGGCTGATGTCCTCTaGCTTGGTCAGATCCATCTGCAGCAGCTTCAGGCGAGGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: GRVGLGDFQNTADVL*LGQIHLQQLQARRT Trigger: TGTTCTCCTCGCCTGAAGCTGCTGCAGATGGATCTGACCAAGGCAGAGGACATCAGCCGTGTTCTGGAAATCACCAAGGCCCACACGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | CCAGGGAAGCAGCTCACAGCCGAATGTGTCCATAAGCAGTGCTATTaGTGCCTTGGAGGTGCCGTAGGCTGCCAAGCAGGGGTATGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PGKQLTAECVHKQCY*CLGGAVGCQAGVWH Trigger: ATGCCATACCCCTGCTTGGCAGCCTACGGCACCTCCAAGGCAGCAATAGCACTGCTTATGGACACATTCGGCTGTGAGCTGCTTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | GATACCCCAGGGAAGCAGCTCACAGCCGAATGTGTCCATAAGCAGTaGTATTGCTGCCTTGGAGGTGCCGTAGGCTGCCAAGCAGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: DTPGKQLTAECVHKQ*YCCLGGAVGCQAGV Trigger: TACCCCTGCTTGGCAGCCTACGGCACCTCCAAGGCAGCAATAGCACTGCTTATGGACACATTCGGCTGTGAGCTGCTTCCCTGGGGTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 90 bp | TGGGCTGCCAACGGTCACAATACGTCCCCTCGAGTGACGCAAGAGTaGCAGGAGGCCCTTGGTCAGCTCAAGTGCACCAAAGAAGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: WAANGHNTSPRVTQE*QEALGQLKCTKEVH Trigger: GTGAACTTCTTTGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | GGAGGCCCTTGGTCAGCTCAAGTGCACCAAAGAAGTTCACCTCCATaGACTTGCGGAAAGTCGCCACTGGAGACAGTTCCACGTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GGPWSAQVHQRSSPP*TCGKSPLETVPRQP Trigger: TGGCTGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAGGGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 90 bp | TCACAATACGTCCCCTCGAGTGACGCAAGAGTGGCAGGAGGCCCTTaGTCAGCTCAAGTGCACCAAAGAAGTTCACCTCCATGCACTTGC | + |
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Preference number: 5 (lower is better) Translates to: SQYVPSSDARVAGGP*SAQVHQRSSPPCTC Trigger: GCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCGAGGGGACGTATTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 90 bp | CCTTGGTCAGCTCAAGTGCACCAAAGAAGTTCACCTCCATGCACTTaGGGAAAGTCGCCACTGGAGACAGTTCCACGTCAGCCACTACGA | + |
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Preference number: 5 (lower is better) Translates to: PWSAQVHQRSSPPCT*GKSPLETVPRQPLR Trigger: TCGTAGTGGCTGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 90 bp | TGCACCAAAGAAGTTCACCTCCATGCACTTGCGGAAAGTCGCCACTaGAGACAGTTCCACGTCAGCCACTACGATATTGAGGCCAGCGTT | + |
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Preference number: 5 (lower is better) Translates to: CTKEVHLHALAESRH*RQFHVSHYDIEASV Trigger: AACGCTGGCCTCAATATCGTAGTGGCTGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | TATCAAAGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTAGGAGCAGGGCCATGTaGGCCGGGCCTCAGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: YQRLQPKSYTKLSIHLGFRSRAM*AGPQCS Trigger: CGAGCACTGAGGCCCGGCCAACATGGCCCTGCTCCT...AAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCTTTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | GTCCCCACCTGCCTAATCATTCTAAAGTTAGCACAGAAATGGTCTGTAGAGTACGTTGGCCAGCAGCAGTaGCTTGCGTTTCTCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VPTCLIILKLAQKWSVEYVGQQQ*LAFLPE Trigger: CTCTGGGAGAAACGCAAGCAACTGCTGCTGGCCAAC...GTACTCTACAGACCATTTCTGTGCTAACTTTAGAATGATTAGGCAGGTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | TTTATTTTAAAATGCCAACAACCAGGCAGGTACAACATACAGCTTCCATGTGGCGCCAGCAGCAGTTGCTaGCGTTTCTCCCAGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FILKCQQPGRYNIQLPCGASSSC*RFSQRF Trigger: GAACCTCTGGGAGAAACGCAAGCAACTGCTGCTGGC...GCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTGTTGGCATTTTAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | CATTCTAAAGTTAGCACAGAAATGGTCTGTAGAGTACTATCAAAGGCTACAGCCTTCACCTCCATGCACTaGCGGAAAGTCGCCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: HSKVSTEMVCRVLSKATAFTSMH*RKVATG Trigger: TCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAA...GGCTGTAGCCTTTGATAGTACTCTACAGACCATTTCTGTGCTAACTTTAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | TGGGATTTACTCTGGACTTGCAGCACTGAGACTGTGGGTCCCAAAAGAATTCTGTTGAAGCAGCCAGGCTaGATAATGCTGACCTTGATA | + |
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Preference number: 5 (lower is better) Translates to: WDLLWTCSTETVGPKRILLKQPG*IMLTLI Trigger: TATCAAGGTCAGCATTATCAAGCCTGGCTGCTTCAA...CAGAATTCTTTTGGGACCCACAGTCTCAGTGCTGCAAGTCCAGAGTAAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | TTTATTTTAAAATGCCAACAACCAGGCAGGTACAACATACAGCTTCCATGTGGCTTGATAATGCTGACCTaGATACCCCAGGGAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FILKCQQPGRYNIQLPCGLIMLT*IPQGSS Trigger: GCTGCTTCCCTGGGGTATCAAGGTCAGCATTATCAA...GCCACATGGAAGCTGTATGTTGTACCTGCCTGGTTGTTGGCATTTTAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | CATTCTAAAGTTAGCACAGAAATGGTCTGTAGAGTACTATCAAAGGCTACAGCCGTCACTGCATCTGTCTaGAAGCAGCCAGGCTTGATA | + |
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Preference number: 5 (lower is better) Translates to: HSKVSTEMVCRVLSKATAVTASV*KQPGLI Trigger: TATCAAGCCTGGCTGCTTCAAGACAGATGCAGTGAC...GGCTGTAGCCTTTGATAGTACTCTACAGACCATTTCTGTGCTAACTTTAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | TATCAAAGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTAGCTCTCTAGGAATGTaGGCCAGCAGCAGTTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: YQRLQPKSYTKLSIHLGFSSLGM*ASSSCL Trigger: CAAGCAACTGCTGCTGGCCAACATTCCTAGAGAGCT...AAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCTTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTACAGCCAAAATCTTATACTAAACTCTCCATCCACCTGGGTTTTCCATTCTTAGCTGTCTCCTaGCCAAAACCAGTGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: QRLQPKSYTKLSIHLGFPFLAVS*PKPVSQ Trigger: TTGTGACACTGGTTTTGGCAAGGAGACAGCTAAGAA...TGGAAAACCCAGGTGGATGGAGAGTTTAGTATAAGATTTTGGCTGTAGCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 72 bp | AGCACCACGAGTGCCGCCGGCGGGGGCAGCAGGCGCTaGCACAGCCAGTCGAGAGCAGCCAGCAGGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: STTSAAGGGSRR*HSQSRAASRAS Trigger: ACTGGCCCTGCTGGCTGCTCTCGACTGGCTGTGCCAGCGCCTGCTGCCCCCGCCGGCGGCACTCGTGGTGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS TCA 72 bp | GCTGGGCTGCCAACGGTCACAATACGTCCCCTCGAGTaGCGCAAGAGTGGCAGGAGGCCCTTGGTCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGLPTVTIRPLE*RKSGRRPLVSS Trigger: TGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | GCCGTAGGCTGCCAAGCAGGGGTATGGCATGTCTCCTaGTGGGCTGCCAACGGTCACAATACGTCCCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: AVGCQAGVWHVS*WAANGHNTSPR Trigger: TCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | ACCAGACCCCACAGGCCAGTGCTGGCCGTGTGGGCCTaGGTGATTTCCAGAACACGGCTGATGTCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TRPHRPVLAVWA*VISRTRLMSSA Trigger: GGCAGAGGACATCAGCCGTGTTCTGGAAATCACCAAGGCCCACACGGCCAGCACTGGCCTGTGGGGTCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | CTGCCAAGCAGGGGTATGGCATGTCTCCTGCTGGGCTaGCAACGGTCACAATACGTCCCCTCGAGTGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSRGMACLLLG*QRSQYVPSSDA Trigger: TGCGTCACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 72 bp | GTAGGCTGCCAAGCAGGGGTATGGCATGTCTCCTGCTaGGCTGCCAACGGTCACAATACGTCCCCTCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGCQAGVWHVSC*AANGHNTSPRV Trigger: CACTCGAGGGGACGTATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 72 bp | TGCCTTGGAGGTGCCGTAGGCTGCCAAGCAGGGGTATaGCATGTCTCCTGCTGGGCTGCCAACGGTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: CLGGAVGCQAGV*HVSCWAANGHN Trigger: ATTGTGACCGTTGGCAGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGCACCTCCAAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | AAGCAGTGCTATTGCTGCCTTGGAGGTGCCGTAGGCTaGCAAGCAGGGGTATGGCATGTCTCCTGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: KQCYCCLGGAVG*QAGVWHVSCWA Trigger: AGCCCAGCAGGAGACATGCCATACCCCTGCTTGGCAGCCTACGGCACCTCCAAGGCAGCAATAGCACTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | GCCACGGCCTGGGTAGTAGCGGCTTCGTGGCTGAGCTaGCAGCAATGCATCGATGATGGCATCTACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: ATAWVVAASWLS*QQCIDDGIYNW Trigger: CCAGTTGTAGATGCCATCATCGATGCATTGCTGGCAGCTCAGCCACGAAGCCGCTACTACCCAGGCCGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 90 bp | GCGTTGTTAACCAGACCCCACAGGCCAGTGCTGGCCGTGTGGGCCTaGGTGATTTCCAGAACACGGCTGATGTCCTCTGCCTTGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ALLTRPHRPVLAVWA*VISRTRLMSSALVR Trigger: TCTGACCAAGGCAGAGGACATCAGCCGTGTTCTGGAAATCACCAAGGCCCACACGGCCAGCACTGGCCTGTGGGGTCTGGTTAACAACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 90 bp | CGGAAAGTCGCCACTGGAGACAGTTCCACGTCAGCCACTACGATATaGAGGCCAGCGTTGTTAACCAGACCCCACAGGCCAGTGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RKVATGDSSTSATTI*RPALLTRPHRPVLA Trigger: GGCCAGCACTGGCCTGTGGGGTCTGGTTAACAACGCTGGCCTCAATATCGTAGTGGCTGACGTGGAACTGTCTCCAGTGGCGACTTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 72 bp | GTCCCCTCGAGTGACGCAAGAGTGGCAGGAGGCCCTTaGTCAGCTCAAGTGCACCAAAGAAGTTCACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VPSSDARVAGGP*SAQVHQRSSPP Trigger: TGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCGAGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | AGTTCCACGTCAGCCACTACGATATTGAGGCCAGCGTaGTTAACCAGACCCCACAGGCCAGTGCTGGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: SSTSATTILRPA*LTRPHRPVLAV Trigger: CACGGCCAGCACTGGCCTGTGGGGTCTGGTTAACAACGCTGGCCTCAATATCGTAGTGGCTGACGTGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 90 bp | GTGTGGGCCTTGGTGATTTCCAGAACACGGCTGATGTCCTCTGCCTaGGTCAGATCCATCTGCAGCAGCTTCAGGCGAGGAGAACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VWALVISRTRLMSSA*VRSICSSFRRGEQR Trigger: CCTCTGTTCTCCTCGCCTGAAGCTGCTGCAGATGGATCTGACCAAGGCAGAGGACATCAGCCGTGTTCTGGAAATCACCAAGGCCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | GGCCTTGGTGATTTCCAGAACACGGCTGATGTCCTCTaGCTTGGTCAGATCCATCTGCAGCAGCTTCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLGDFQNTADVL*LGQIHLQQLQA Trigger: CGCCTGAAGCTGCTGCAGATGGATCTGACCAAGGCAGAGGACATCAGCCGTGTTCTGGAAATCACCAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | GGGAAGCAGCTCACAGCCGAATGTGTCCATAAGCAGTaGTATTGCTGCCTTGGAGGTGCCGTAGGCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GKQLTAECVHKQ*YCCLGGAVGCQ Trigger: TTGGCAGCCTACGGCACCTCCAAGGCAGCAATAGCACTGCTTATGGACACATTCGGCTGTGAGCTGCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 72 bp | AACGGTCACAATACGTCCCCTCGAGTGACGCAAGAGTaGCAGGAGGCCCTTGGTCAGCTCAAGTGCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: NGHNTSPRVTQE*QEALGQLKCTK Trigger: TTTGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGTCACTCGAGGGGACGTATTGTGACCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | GCCACTGGAGACAGTTCCACGTCAGCCACTACGATATaGAGGCCAGCGTTGTTAACCAGACCCCACAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATGDSSTSATTI*RPALLTRPHRP Trigger: TGGCCTGTGGGGTCTGGTTAACAACGCTGGCCTCAATATCGTAGTGGCTGACGTGGAACTGTCTCCAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 90 bp | CCCTTGGTCAGCTCAAGTGCACCAAAGAAGTTCACCTCCATGCACTaGCGGAAAGTCGCCACTGGAGACAGTTCCACGTCAGCCACTACG | + |
|
Preference number: 6 (lower is better) Translates to: PLVSSSAPKKFTSMH*RKVATGDSSTSATT Trigger: CGTAGTGGCTGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | ACGCAAGAGTGGCAGGAGGCCCTTGGTCAGCTCAAGTaGACCAAAGAAGTTCACCTCCATGCACTTGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TQEWQEALGQLK*TKEVHLHALAE Trigger: TTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCAAGGGCCTCCTGCCACTCTTGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | TGGGTAGTAGCGGCTTCGTGGCTGAGCTGCCAGCAATaGATCGATGATGGCATCTACAACTGGGCTAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WVVAASWLSCQQ*IDDGIYNWAKV Trigger: GACCTTAGCCCAGTTGTAGATGCCATCATCGATGCATTGCTGGCAGCTCAGCCACGAAGCCGCTACTACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | TTAAGCAGGAGCAGGGCCATGTTGGCCGGGCCTCAGTaGTCGGGGCAGAAGGTGATTGATAAAGAAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRSRAMLAGPQ*SGQKVIDKEVL Trigger: CAGAACTTCTTTATCAATCACCTTCTGCCCCGAGCACTGAGGCCCGGCCAACATGGCCCTGCTCCTGCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | GCTCAAGTGCACCAAAGAAGTTCACCTCCATGCACTTaGGGAAAGTCGCCACTGGAGACAGTTCCACGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AQVHQRSSPPCT*GKSPLETVPRQ Trigger: CTGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | TTGGTGATTTCCAGAACACGGCTGATGTCCTCTGCCTaGGTCAGATCCATCTGCAGCAGCTTCAGGCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LVISRTRLMSSA*VRSICSSFRRG Trigger: TCCTCGCCTGAAGCTGCTGCAGATGGATCTGACCAAGGCAGAGGACATCAGCCGTGTTCTGGAAATCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS GCA 72 bp | TGGTCAGCTCAAGTGCACCAAAGAAGTTCACCTCCATaGACTTGCGGAAAGTCGCCACTGGAGACAGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSAQVHQRSSPP*TCGKSPLETVP Trigger: TGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CCA 72 bp | GAAGTTCACCTCCATGCACTTGCGGAAAGTCGCCACTaGAGACAGTTCCACGTCAGCCACTACGATATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVHLHALAESRH*RQFHVSHYDIE Trigger: CTCAATATCGTAGTGGCTGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | AGCTCAAGTGCACCAAAGAAGTTCACCTCCATGCACTaGCGGAAAGTCGCCACTGGAGACAGTTCCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSAPKKFTSMH*RKVATGDSSTS Trigger: TGACGTGGAACTGTCTCCAGTGGCGACTTTCCGCAAGTGCATGGAGGTGAACTTCTTTGGTGCACTTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 90 bp | CAGAGGTTCACATTAGTCACTGCATCTGTCTTGAAGCAGCCAGGCTaGATAATGCTGACCTTGATACCCCAGGGAAGCAGCTCACAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRFTLVTASVLKQPG*IMLTLIPQGSSSQP Trigger: CGGCTGTGAGCTGCTTCCCTGGGGTATCAAGGTCAGCATTATCAAGCCTGGCTGCTTCAAGACAGATGCAGTGACTAATGTGAACCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 90 bp | TGCTTGCGTTTCTCCCAGAGGTTCACATTAGTCACTGCATCTGTCTaGAAGCAGCCAGGCTTGATAATGCTGACCTTGATACCCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CLRFSQRFTLVTASV*KQPGLIMLTLIPQG Trigger: TCCCTGGGGTATCAAGGTCAGCATTATCAAGCCTGGCTGCTTCAAGACAGATGCAGTGACTAATGTGAACCTCTGGGAGAAACGCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | ACATTAGTCACTGCATCTGTCTTGAAGCAGCCAGGCTaGATAATGCTGACCTTGATACCCCAGGGAAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLVTASVLKQPG*IMLTLIPQGSS Trigger: GCTGCTTCCCTGGGGTATCAAGGTCAGCATTATCAAGCCTGGCTGCTTCAAGACAGATGCAGTGACTAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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| CDS CAA 72 bp | TTCTCCCAGAGGTTCACATTAGTCACTGCATCTGTCTaGAAGCAGCCAGGCTTGATAATGCTGACCTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: FSQRFTLVTASV*KQPGLIMLTLI Trigger: TATCAAGGTCAGCATTATCAAGCCTGGCTGCTTCAAGACAGATGCAGTGACTAATGTGAACCTCTGGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034363.7 |
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