Pregenerated sensors for HSD11B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016194Ensembl transcript IDs: ENSMUST00000016338.15, ENSMUST00000159644.4, ENSMUST00000160929.8, ENSMUST00000161406.2, ENSMUST00000161737.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTCTGGAAAGATACTTTaGTGGGTAGGGCTTACAGAA | + |
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Preference number: 3 (lower is better) Translates to: VFISIVTIKFTTAGPKVVSGKIL*WVGLTE Trigger: TTCTGTAAGCCCTACCCACAAAAGTATCTTTCCAGA...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATTCTGGAAAGATACTTTaGTGGGTAGGGCTTACAGAA | + |
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Preference number: 3 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNSGKIL*WVGLTE Trigger: TTCTGTAAGCCCTACCCACAAAAGTATCTTTCCAGA...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| 3UTR-3UTR CAA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATGGTGTACCCCAAAATTaGTGTATCTCTGGAAAGATA | + |
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Preference number: 3 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNGVPQN*CISGKI Trigger: TATCTTTCCAGAGATACACAAATTTTGGGGTACACC...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATGGTGTACCCCAAAATTaGTGTATCTCTGGAAAGATA | + |
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Preference number: 3 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNGVPQN*CISGKI Trigger: TATCTTTCCAGAGATACACAAATTTTGGGGTACACC...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| 3UTR TCA 72 bp | CTGTTTTGCCATTTGGATTTGTCTGATATTCTGGCATaGTTTGATTTGAACTATTCAGTTCTGGTAGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LFCHLDLSDILA*FDLNYSVLVVS Trigger: TGAGACTACCAGAACTGAATAGTTCAAATCAAATCATGCCAGAATATCAGACAAATCCAAATGGCAAAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTATCAGGCAGGACTGTTCTAAGACCACTCACCAGGGCTCAGGAGTTGACCTTCCTCCGACCTaGCAGTCAATACCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRSIRQDCSKTTHQGSGVDLPPT*QSIPHG Trigger: CCCATGTGGTATTGACTGCCAGGTCGGAGGAAGGTC...AACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATACTTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | TACAGAAGTATCAGGCAGGACTGTTCTAAGACCACTCACCAGGGCTCAGGAGTTCTGTTTCTGTGTCTATaGGGCCAAGGACACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRSIRQDCSKTTHQGSGVLFLCL*GQGHRE Trigger: CTCTCTGTGTCCTTGGCCTCATAGACACAGAAACAG...AACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATACTTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | TCTGGTAGTCTCAGGAGTAATTCTATGTTCGTTATATCCAATCCCACCAGATCGCAGCCAAGGAGGAGATaGCGGCAATGCTGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLRSNSMFVISNPTRSQPRRR*RQCCHC Trigger: GCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTG...CGATCTGGTGGGATTGGATATAACGAACATAGAATTACTCCTGAGACTACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR TCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTCAGCCAAGGAGGAGATaGCGGCAATGCTGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVQPRRR*RQCCHC Trigger: GCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTG...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGCTCTGCTTCAGCATaGGCAAGGCGGCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVCSASA*ARRLCS Trigger: TGAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCA...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTCTGGTAGTCTCAGGAGTAATTCTATGTTCGTTATATCCAATCCCACCATGCTCTGCTTCAGCATaGGCAAGGCGGCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLVVSGVILCSLYPIPPCSASA*ARRLCS Trigger: TGAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCA...TGGTGGGATTGGATATAACGAACATAGAATTACTCCTGAGACTACCAGAACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR TCA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTCAGCCAAGGAGGAGATaGCGGCAATGCTGCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFQPRRR*RQCCHC Trigger: GCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTG...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCAGCCAAGGAGGAGATaGCGGCAATGCTGCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNQPRRR*RQCCHC Trigger: GCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTATGCTGCCATTGCTCTaGTTCAGCATGGGCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVMLPLL*FSMGKA Trigger: CGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCAT...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTCGGCAATGCTGCCATTaGTCTGCTTCAGCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVRQCCH*SASAWA Trigger: TGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCG...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTGACCTTCCTCCGACCTaGCAGTCAATACCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVDLPPT*QSIPHG Trigger: CCCATGTGGTATTGACTGCCAGGTCGGAGGAAGGTC...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | TCTGGTAGTCTCAGGAGTAATTCTATGTTCGTTATATCCAATCCCACCAGATCGGAGTGGATGTCGTCATaGAAGAGAGACAGCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLRSNSMFVISNPTRSEWMSS*KRDSEV Trigger: GACCTCGCTGTCTCTCTTCCATGACGACATCCACTC...CGATCTGGTGGGATTGGATATAACGAACATAGAATTACTCCTGAGACTACCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR GCA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTATGCTGCCATTGCTCTaGTTCAGCATGGGCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFMLPLL*FSMGKA Trigger: CGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCAT...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | AGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGATGCTGCCATTGCTCTaGTTCAGCATGGGCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVARISHDEVYPKICVSLMLPLL*FSMGKA Trigger: CGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCAT...CAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTGAGTGGATGTCGTCATaGAAGAGAGACAGCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVEWMSS*KRDSEV Trigger: GACCTCGCTGTCTCTCTTCCATGACGACATCCACTC...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATTGCTCTGCTTCAGCATaGGCAAGGCGGCTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNCSASA*ARRLCS Trigger: TGAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCA...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | AGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGGAGTGGATGTCGTCATaGAAGAGAGACAGCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SVARISHDEVYPKICVSLEWMSS*KRDSEV Trigger: GACCTCGCTGTCTCTCTTCCATGACGACATCCACTC...CAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCTTTGCTGGCCCCAGTaGCAATCACTTTCTTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNLCWPQ*QSLSFP Trigger: AGGGAAAGAAAGTGATTGTCACTGGGGCCAGCAAAG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCTGTTTCTGTGTCTATaGGGCCAAGGACACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNLFLCL*GQGHRE Trigger: CTCTCTGTGTCCTTGGCCTCATAGACACAGAAACAG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | AGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGCTGTTTCTGTGTCTATaGGGCCAAGGACACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SVARISHDEVYPKICVSLLFLCL*GQGHRE Trigger: CTCTCTGTGTCCTTGGCCTCATAGACACAGAAACAG...CAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | TTGAACTATTCAGTTCTGGTAGTCTCAGGAGTAATTCTATGTTCGTTATATCCAATGCTGCCATTGCTCTaGTTCAGCATGGGCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LNYSVLVVSGVILCSLYPMLPLL*FSMGKA Trigger: CGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCAT...TGGATATAACGAACATAGAATTACTCCTGAGACTACCAGAACTGAATAGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR CCA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATGAGTGGATGTCGTCATaGAAGAGAGACAGCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNEWMSS*KRDSEV Trigger: GACCTCGCTGTCTCTCTTCCATGACGACATCCACTC...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| 3UTR CAA 72 bp | GTACCCCAAAATTTGTGTATCTCTGGAAAGATACTTTaGTGGGTAGGGCTTACAGAAGTATCAGGCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: VPQNLCISGKIL*WVGLTEVSGRT Trigger: AGTCCTGCCTGATACTTCTGTAAGCCCTACCCACAAAAGTATCTTTCCAGAGATACACAAATTTTGGGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATCTTTGCTGGCCCCAGTaGCAATCACTTTCTTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNLCWPQ*QSLSFP Trigger: AGGGAAAGAAAGTGATTGTCACTGGGGCCAGCAAAG...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCATCCAGAGCAAACTTaGTTGCAGAGTAGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNHPEQT*LQSREQ Trigger: TTGCTCCCTACTCTGCAAGCAAGTTTGCTCTGGATG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | AGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGCATCCAGAGCAAACTTaGTTGCAGAGTAGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SVARISHDEVYPKICVSLHPEQT*LQSREQ Trigger: TTGCTCCCTACTCTGCAAGCAAGTTTGCTCTGGATG...CAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTCATCCAGAGCAAACTTaGTTGCAGAGTAGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFHPEQT*LQSREQ Trigger: TTGCTCCCTACTCTGCAAGCAAGTTTGCTCTGGATG...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCAGAGCAAACTTGCTTaGAGAGTAGGGAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNQSKLA*RVGSNH Trigger: ATGATTGCTCCCTACTCTGCAAGCAAGTTTGCTCTG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTCAGAGCAAACTTGCTTaGAGAGTAGGGAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFQSKLA*RVGSNH Trigger: ATGATTGCTCCCTACTCTGCAAGCAAGTTTGCTCTG...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTATCACTTTCTTTCCCTaGAGCATTTCTGGTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: VFISIVTIKFTTAGPKVVITFFP*SISGLN Trigger: GTTCAGACCAGAAATGCTCCAGGGAAAGAAAGTGAT...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016338.15 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | AGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGATGGGCTCCCATTTTTaGCAGATGATATGCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: SVARISHDEVYPKICVSLMGSHF*QMICHF Trigger: GAAATGGCATATCATCTGTCAAAAATGGGAGCCCAT...CAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATATGGGCTCCCATTTTTaGCAGATGATATGCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNMGSHF*QMICHF Trigger: GAAATGGCATATCATCTGTCAAAAATGGGAGCCCAT...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR GCA 90 bp | AGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGGAAAGATACCAGAGCAAACTTGCTTaGAGAGTAGGGAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: RISHDEVYPKICVSLERYQSKLA*RVGSNH Trigger: ATGATTGCTCCCTACTCTGCAAGCAAGTTTGCTCTG...GTATCTTTCCAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR TCA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATATGGGCTCCCATTTTTaGCAGATGATATGCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNMGSHF*QMICHF Trigger: GAAATGGCATATCATCTGTCAAAAATGGGAGCCCAT...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATTCCCTGGAGCATTTCTaGTCTGAACTCTTCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNSLEHF*SELFIC Trigger: ACAAATGAAGAGTTCAGACCAGAAATGCTCCAGGGA...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016338.15 ENSMUST00000161737.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATATCACTTTCTTTCCCTaGAGCATTTCTGGTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNITFFP*SISGLN Trigger: GTTCAGACCAGAAATGCTCCAGGGAAAGAAAGTGAT...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016338.15 ENSMUST00000161737.8 |
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| CDS TCA 90 bp | GACTTCTCTGTTGTGGAACTGTTCTTCCCCCAGCCAAGGAGGAGATaGCGGCAATGCTGCCATTGCTCTGCTTCAGCATGGGCAAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DFSVVELFFPQPRRR*RQCCHCSASAWARR Trigger: CCGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTGGGGGAAGAACAGTTCCACAACAGAGAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTATCAGGCAGGACTGTTCTAAGACCACTCACCAGGGCTCAGGAGTTCGTAGAGCTGTGCCTTaGATGATCTCCAGGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YRSIRQDCSKTTHQGSGVRRAVP*MISRAH Trigger: GTGCGCCCTGGAGATCATCAAAGGCACAGCTCTACG...AACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATACTTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS GCA 90 bp | AAATGTCATGTCTTCCATAGTGCCAGCAATGTAGTGAGCAGAGGCTaGTCCGAGTTCAAGGCAGCGAGACACTACCTTCTGGAGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KCHVFHSASNVVSRG*SEFKAARHYLLETF Trigger: GAAGGTCTCCAGAAGGTAGTGTCTCGCTGCCTTGAACTCGGAGCAGCCTCTGCTCACTACATTGCTGGCACTATGGAAGACATGACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CCA 90 bp | GTGCCTTTGATGATCTCCAGGGCGCACTCCTCCTTGGGAGAAGCTTaGGCGTTAATTATCCCAGAGATTTCCTTCATAGCTGTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPLMISRAHSSLGEA*ALIIPEISFIAVSV Trigger: CACAGAAACAGCTATGAAGGAAATCTCTGGGATAATTAACGCCCAAGCTTCTCCCAAGGAGGAGTGCGCCCTGGAGATCATCAAAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTATCAGGCAGGACTGTTCTAAGACCACTCACCAGGGCTCAGGAGTTCCAGAGCAAACTTGCTaGCAGAGTAGGGAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: YRSIRQDCSKTTHQGSGVPEQTC*QSREQS Trigger: TGATTGCTCCCTACTCTGCAAGCAAGTTTGCTCTGG...AACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATACTTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTATCAGGCAGGACTGTTCTAAGACCACTCACCAGGGCTCAGGAGTTATGAGCTTTCCCGCCTaGACAATAAATTGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRSIRQDCSKTTHQGSGVMSFPA*TINCSA Trigger: TGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCAT...AACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATACTTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VFISIVTIKFTTAGPKVVTAMLP*LCFSMG Trigger: GCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGT...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | CTATTCAGTTCTGGTAGTCTCAGGAGTAATTCTATGTTCGTTATATCCAATCCCACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSSGSLRSNSMFVISNPTAMLP*LCFSMG Trigger: GCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGT...GGGATTGGATATAACGAACATAGAATTACTCCTGAGACTACCAGAACTGAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS-3UTR CAA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCGTAGAGCTGTGCCTTaGATGATCTCCAGGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNRRAVP*MISRAH Trigger: GTGCGCCCTGGAGATCATCAAAGGCACAGCTCTACG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGGAAAGATACACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RISHDEVYPKICVSLERYTAMLP*LCFSMG Trigger: GCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGT...GTATCTTTCCAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATCGTAGAGCTGTGCCTTaGATGATCTCCAGGGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNRRAVP*MISRAH Trigger: GTGCGCCCTGGAGATCATCAAAGGCACAGCTCTACG...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | ACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGCCAGAGCAAACTTGCTaGCAGAGTAGGGAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: TVQVLQEFLMMRCTPKFVPEQTC*QSREQS Trigger: TGATTGCTCCCTACTCTGCAAGCAAGTTTGCTCTGG...CACAAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTATATCCATAGTTACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTATGAGCTTTCCCGCCTaGACAATAAATTGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VFISIVTIKFTTAGPKVVMSFPA*TINCSA Trigger: TGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCAT...AACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGTAACTATGGATATAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTATGAGCTTTCCCGCCTaGACAATAAATTGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFMSFPA*TINCSA Trigger: TGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCAT...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | CAGTGTGAGGTAAAGCCGATACAACCACTATGTGTTTATATCCATAGTTACAATCCAGAGCAAACTTGCTaGCAGAGTAGGGAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: QCEVKPIQPLCVYIHSYNPEQTC*QSREQS Trigger: TGATTGCTCCCTACTCTGCAAGCAAGTTTGCTCTGG...ATTGTAACTATGGATATAAACACATAGTGGTTGTATCGGCTTTACCTCACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTCGCCTTGACAATAAATaGCTCCGCAAATGTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFRLDNK*LRKCHV Trigger: GACATGACATTTGCGGAGCAATTTATTGTCAAGGCG...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | TTCACTGTGCAAGTGTTGCAAGAATTTCTCATGATGAGGTGTACCCCAAAATTTCATGGGCTCCCATTTTaGACAGATGATATGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FTVQVLQEFLMMRCTPKFHGLPF*TDDMPF Trigger: AAATGGCATATCATCTGTCAAAAATGGGAGCCCATG...AAATTTTGGGGTACACCTCATCATGAGAAATTCTTGCAACACTTGCACAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | ACAATCAAGTTCACAACTGCAGGCCCCAAAGTGGTTTGTGACATTTATTACAATCATGGGCTCCCATTTTaGACAGATGATATGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TIKFTTAGPKVVCDIYYNHGLPF*TDDMPF Trigger: AAATGGCATATCATCTGTCAAAAATGGGAGCCCATG...ATTGTAATAAATGTCACAAACCACTTTGGGGCCTGCAGTTGTGAACTTGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGGAAAGATACCGCCTTGACAATAAATaGCTCCGCAAATGTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RISHDEVYPKICVSLERYRLDNK*LRKCHV Trigger: GACATGACATTTGCGGAGCAATTTATTGTCAAGGCG...GTATCTTTCCAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTCTCATGATGAGGTGTACCCCAAAATTTGTGTATCTCTGGAAAGATACCATGGGCTCCCATTTTaGACAGATGATATGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RISHDEVYPKICVSLERYHGLPF*TDDMPF Trigger: AAATGGCATATCATCTGTCAAAAATGGGAGCCCATG...GTATCTTTCCAGAGATACACAAATTTTGGGGTACACCTCATCATGAGAAATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | CCCCCAGCCAAGGAGGAGATGACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGCAAGGCGGCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PPAKEEMTAMLP*LCFSMGKAAVL Trigger: GAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS GCA 72 bp | GCCAAGGAGGAGATGACGGCAATGCTGCCATTGCTCTaGTTCAGCATGGGCAAGGCGGCTGTGCTCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: AKEEMTAMLPLL*FSMGKAAVLMT Trigger: GGTCATGAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGTCATCTCCTCCTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161406.2 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | TTCCCAGCCAAGGAGGAGATGACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGCAAGGCGGCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPAKEEMTAMLP*LCFSMGKAAVL Trigger: GAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 90 bp | ACTGTTCTTCCCCCAGCCAAGGAGGAGATGACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGCAAGGCGGCTGTGCTCATGACCACG | + |
|
Preference number: 6 (lower is better) Translates to: TVLPPAKEEMTAMLP*LCFSMGKAAVLMTT Trigger: CGTGGTCATGAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTGGGGGAAGAACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161406.2 |
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| CDS CAA 90 bp | TGGGTCATTTTCCCAGCCAAGGAGGAGATGACGGCAATGCTGCCATaGCTCTGCTTCAGCATGGGCAAGGCGGCTGTGCTCATGACCACG | + |
|
Preference number: 6 (lower is better) Translates to: WVIFPAKEEMTAMLP*LCFSMGKAAVLMTT Trigger: CGTGGTCATGAGCACAGCCGCCTTGCCCATGCTGAAGCAGAGCAATGGCAGCATTGCCGTCATCTCCTCCTTGGCTGGGAAAATGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CCA 72 bp | GCTGCTCCGAGTTCAAGGCAGCGAGACACTACCTTCTaGAGACCTTCCTCCGACCTGGCAGTCAATACCACA | + |
|
Preference number: 6 (lower is better) Translates to: AAPSSRQRDTTF*RPSSDLAVNTT Trigger: TGTGGTATTGACTGCCAGGTCGGAGGAAGGTCTCCAGAAGGTAGTGTCTCGCTGCCTTGAACTCGGAGCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS GCA 72 bp | GTCTTCCATAGTGCCAGCAATGTAGTGAGCAGAGGCTaGTCCGAGTTCAAGGCAGCGAGACACTACCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VFHSASNVVSRG*SEFKAARHYLL Trigger: CAGAAGGTAGTGTCTCGCTGCCTTGAACTCGGAGCAGCCTCTGCTCACTACATTGCTGGCACTATGGAAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | GCTGTGCCTTTGATGATCTCCAGGGCGCACTCCTCCTaGGGAGAAGCTTGGGCGTTAATTATCCCAGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: AVPLMISRAHSS*GEAWALIIPEI Trigger: AATCTCTGGGATAATTAACGCCCAAGCTTCTCCCAAGGAGGAGTGCGCCCTGGAGATCATCAAAGGCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | CAGTCCGCCCATGAGCTTTCCCGCCTTGACAATAAATaGCTCCGCAAATGTCATGTCTTCCATAGTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSAHELSRLDNK*LRKCHVFHSAS Trigger: GCTGGCACTATGGAAGACATGACATTTGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCATGGGCGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | GATGATCTCCAGGGCGCACTCCTCCTTGGGAGAAGCTaGGGCGTTAATTATCCCAGAGATTTCCTTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: DDLQGALLLGRS*GVNYPRDFLHS Trigger: GCTATGAAGGAAATCTCTGGGATAATTAACGCCCAAGCTTCTCCCAAGGAGGAGTGCGCCCTGGAGATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 90 bp | TTGCGTAGAGCTGTGCCTTTGATGATCTCCAGGGCGCACTCCTCCTaGGGAGAAGCTTGGGCGTTAATTATCCCAGAGATTTCCTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: LRRAVPLMISRAHSS*GEAWALIIPEISFI Trigger: TATGAAGGAAATCTCTGGGATAATTAACGCCCAAGCTTCTCCCAAGGAGGAGTGCGCCCTGGAGATCATCAAAGGCACAGCTCTACGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS GCA 72 bp | AGTCCGCCCATGAGCTTTCCCGCCTTGACAATAAATTaGTCCGCAAATGTCATGTCTTCCATAGTGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPMSFPALTIN*SANVMSSIVPA Trigger: TGCTGGCACTATGGAAGACATGACATTTGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCATGGGCGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CCA 72 bp | ATGATCTCCAGGGCGCACTCCTCCTTGGGAGAAGCTTaGGCGTTAATTATCCCAGAGATTTCCTTCATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MISRAHSSLGEA*ALIIPEISFIA Trigger: AGCTATGAAGGAAATCTCTGGGATAATTAACGCCCAAGCTTCTCCCAAGGAGGAGTGCGCCCTGGAGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 90 bp | AAGCATGTCCAGTCCGCCCATGAGCTTTCCCGCCTTGACAATAAATaGCTCCGCAAATGTCATGTCTTCCATAGTGCCAGCAATGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KHVQSAHELSRLDNK*LRKCHVFHSASNVV Trigger: CACTACATTGCTGGCACTATGGAAGACATGACATTTGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCATGGGCGGACTGGACATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 90 bp | TGTGCCTTTGATGATCTCCAGGGCGCACTCCTCCTTGGGAGAAGCTaGGGCGTTAATTATCCCAGAGATTTCCTTCATAGCTGTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CAFDDLQGALLLGRS*GVNYPRDFLHSCFC Trigger: ACAGAAACAGCTATGAAGGAAATCTCTGGGATAATTAACGCCCAAGCTTCTCCCAAGGAGGAGTGCGCCCTGGAGATCATCAAAGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CCA 72 bp | TTCCATGATCTTCCTTCCTGGGTTCCCAAGCAGGATTaGAGTCAAAGGCGATTTGTCATAGTACACCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: FHDLPSWVPKQD*SQRRFVIVHLA Trigger: AGCGAGGTGTACTATGACAAATCGCCTTTGACTCCAATCCTGCTTGGGAACCCAGGAAGGAAGATCATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016338.15 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | ATAAGCATGTCCAGTCCGCCCATGAGCTTTCCCGCCTaGACAATAAATTGCTCCGCAAATGTCATGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISMSSPPMSFPA*TINCSANVMSS Trigger: GGAAGACATGACATTTGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCATGGGCGGACTGGACATGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 90 bp | TGGTTTAGAATAAGCATGTCCAGTCCGCCCATGAGCTTTCCCGCCTaGACAATAAATTGCTCCGCAAATGTCATGTCTTCCATAGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WFRISMSSPPMSFPA*TINCSANVMSSIVP Trigger: TGGCACTATGGAAGACATGACATTTGCGGAGCAATTTATTGTCAAGGCGGGAAAGCTCATGGGCGGACTGGACATGCTTATTCTAAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
||
| CDS TCA 72 bp | GCAGTCAATACCACATGGGCTCCCATTTTTGACAGATaGTATGCCATTTCTCTTCCAATCCCTTTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVNTTWAPIFDR*YAISLPIPLLA Trigger: GGCCAGCAAAGGGATTGGAAGAGAAATGGCATATCATCTGTCAAAAATGGGAGCCCATGTGGTATTGACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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| CDS CAA 72 bp | CCGACCTGGCAGTCAATACCACATGGGCTCCCATTTTaGACAGATGATATGCCATTTCTCTTCCAATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTWQSIPHGLPF*TDDMPFLFQSL Trigger: AAGGGATTGGAAGAGAAATGGCATATCATCTGTCAAAAATGGGAGCCCATGTGGTATTGACTGCCAGGTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
||
| CDS TCA 72 bp | CGACCTGGCAGTCAATACCACATGGGCTCCCATTTTTaGCAGATGATATGCCATTTCTCTTCCAATCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPGSQYHMGSHF*QMICHFSSNPF Trigger: AAAGGGATTGGAAGAGAAATGGCATATCATCTGTCAAAAATGGGAGCCCATGTGGTATTGACTGCCAGGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000016338.15 ENSMUST00000159644.4 ENSMUST00000160929.8 ENSMUST00000161737.8 |
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