Pregenerated sensors for HSBP1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078963Ensembl transcript IDs: ENSMUST00000166219.2, ENSMUST00000237192.2
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGGCCAGACTGGCTGCATGCCTCTGCCACCCAAGTGCTGGGGTTaGAGGCATGTGCCATTATGGCCCAGCTTTGTTCTTCATTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: VGQTGCMPLPPKCWG*RHVPLWPSFVLHLL Trigger: TAACAAATGAAGAACAAAGCTGGGCCATAATGGCACATGCCTTCAACCCCAGCACTTGGGTGGCAGAGGCATGCAGCCAGTCTGGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR TCA 90 bp | ATATGCTTAGAAGAACATTGGCCAGGTGGTGGTGGCACACATCTTTaGTGCCATCACTCAGGAAGCAGAGAGAGGCATATAGGCATAGGT | + |
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Preference number: 1 (lower is better) Translates to: ICLEEHWPGGGGTHL*CHHSGSRERHIGIG Trigger: ACCTATGCCTATATGCCTCTCTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAATGTTCTTCTAAGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR TCA 90 bp | AGGCATGTGCCATTATGGCCCAGCTTTGTTCTTCATTTGTTAAAGTaGATTTTAGTTTTCAGTGGGTTAGGGTATAGCTCGTTGGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: RHVPLWPSFVLHLLK*ILVFSGLGYSSLVA Trigger: GGCTACCAACGAGCTATACCCTAACCCACTGAAAACTAAAATTCACTTTAACAAATGAAGAACAAAGCTGGGCCATAATGGCACATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTGGCCAGGTGGTGGTGGCACACATCTTTGATGCCATCACTCAGGAAGCAGGCCAGACTGGCTGCATaGCTCTGCCACCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: TLARWWWHTSLMPSLRKQARLAA*LCHPSA Trigger: AGCACTTGGGTGGCAGAGGCATGCAGCCAGTCTGGC...CTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCCCTCTGTAGGCCAGACTGGCTGCATGCCTCTGCCACCCAAGTGCTGGGGAGGCATGTGCCATTATaGCCCAGCTTTGTTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: NSLCRPDWLHASATQVLGRHVPL*PSFVLH Trigger: ATGAAGAACAAAGCTGGGCCATAATGGCACATGCCT...CCCCAGCACTTGGGTGGCAGAGGCATGCAGCCAGTCTGGCCTACAGAGGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR CAA 90 bp | TGTAGGCCAGACTGGCTGCATGCCTCTGCCACCCAAGTGCTGGGGTaGAAGGCATGTGCCATTATGGCCCAGCTTTGTTCTTCATTTGTT | + |
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Preference number: 2 (lower is better) Translates to: CRPDWLHASATQVLG*KACAIMAQLCSSFV Trigger: AACAAATGAAGAACAAAGCTGGGCCATAATGGCACATGCCTTCAACCCCAGCACTTGGGTGGCAGAGGCATGCAGCCAGTCTGGCCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGCCAGGTGGTGGTGGCACACATCTTTGATGCCATCACTCAGGAAGCAGAGAGGCATGTGCCATTATaGCCCAGCTTTGTTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: IGQVVVAHIFDAITQEAERHVPL*PSFVLH Trigger: ATGAAGAACAAAGCTGGGCCATAATGGCACATGCCT...CTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR CAA 90 bp | CATATGCTTAGAAGAACATTGGCCAGGTGGTGGTGGCACACATCTTaGATGCCATCACTCAGGAAGCAGAGAGAGGCATATAGGCATAGG | + |
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Preference number: 2 (lower is better) Translates to: HMLRRTLARWWWHTS*MPSLRKQREAYRHR Trigger: CCTATGCCTATATGCCTCTCTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAATGTTCTTCTAAGCATATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCCAGGTGGTGGTGGCACACATCTTTGATGCCATCACTCAGGAAGCAGAGAAAGAAAGAAAATCCTaGAACTGGGAGAATGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: IGQVVVAHIFDAITQEAEKERKS*NWENGE Trigger: CTCCCCATTCTCCCAGTTTCAGGATTTTCTTTCTTT...CTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR TCA 90 bp | CACACATCTTTGATGCCATCACTCAGGAAGCAGAGAGAGGCATATAGGCATAGGTACATCAGAAGGCTATaGCCGTTTTTAAAGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: HTSLMPSLRKQREAYRHRYIRRL*PFLKPS Trigger: ACTTGGCTTTAAAAACGGTCATAGCCTTCTGATGTA...CCTATGCCTATATGCCTCTCTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR TCA 90 bp | CACACATCTTTGATGCCATCACTCAGGAAGCAGAGAGAGGCATATAGGCATAGGGTAGTAGGGGAAGGGTaGGAATGTGATAAAATAGTA | + |
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Preference number: 2 (lower is better) Translates to: HTSLMPSLRKQREAYRHRVVGEG*ECDKIV Trigger: TACTATTTTATCACATTCTCACCCTTCCCCTACTAC...CCTATGCCTATATGCCTCTCTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR TCA 72 bp | ACTGGCTGCATGCCTCTGCCACCCAAGTGCTGGGGTTaGAGGCATGTGCCATTATGGCCCAGCTTTGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: TGCMPLPPKCWG*RHVPLWPSFVL Trigger: AAGAACAAAGCTGGGCCATAATGGCACATGCCTTCAACCCCAGCACTTGGGTGGCAGAGGCATGCAGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR-3UTR CAA 90 bp | ACATTGGCCAGGTGGTGGTGGCACACATCTTTGATGCCATCACTCAGGAAGCAGACCCAAGTGCTGGGGTaGAAGGCATGTGCCATTATG | + |
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Preference number: 3 (lower is better) Translates to: TLARWWWHTSLMPSLRKQTQVLG*KACAIM Trigger: CATAATGGCACATGCCTTCAACCCCAGCACTTGGGT...CTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR CCA 72 bp | CAGGCTCATATGCTTAGAAGAACATTGGCCAGGTGGTaGTGGCACACATCTTTGATGCCATCACTCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: QAHMLRRTLARW*WHTSLMPSLRK Trigger: CTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAATGTTCTTCTAAGCATATGAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR TCA 72 bp | CCATTATGGCCCAGCTTTGTTCTTCATTTGTTAAAGTaGATTTTAGTTTTCAGTGGGTTAGGGTATAGCTCG | + |
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Preference number: 3 (lower is better) Translates to: PLWPSFVLHLLK*ILVFSGLGYSS Trigger: CGAGCTATACCCTAACCCACTGAAAACTAAAATTCACTTTAACAAATGAAGAACAAAGCTGGGCCATAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTGGAACTCCCTCTGTAGGCCAGACTGGCTGCATGCCTCTGCCACCCAAGTTCTCAGCCGCGTTCTaGAGCAAGTCCCCACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CPGTPSVGQTGCMPLPPKFSAAF*SKSPQG Trigger: TCCCTGTGGGGACTTGCTGCAGAACGCGGCTGAGAA...CTTGGGTGGCAGAGGCATGCAGCCAGTCTGGCCTACAGAGGGAGTTCCAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR GCA 90 bp | CATGCCTCTGCCACCCAAGTGCTGGGGTTGAAGGCATGTGCCATTATGGCCCAGTTCTCAGCCGCGTTCTaGAGCAAGTCCCCACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: HASATQVLGLKACAIMAQFSAAF*SKSPQG Trigger: TCCCTGTGGGGACTTGCTGCAGAACGCGGCTGAGAA...CTGGGCCATAATGGCACATGCCTTCAACCCCAGCACTTGGGTGGCAGAGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR CAA 72 bp | GACTGGCTGCATGCCTCTGCCACCCAAGTGCTGGGGTaGAAGGCATGTGCCATTATGGCCCAGCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DWLHASATQVLG*KACAIMAQLCS Trigger: AGAACAAAGCTGGGCCATAATGGCACATGCCTTCAACCCCAGCACTTGGGTGGCAGAGGCATGCAGCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTGGAACTCCCTCTGTAGGCCAGACTGGCTGCATGCCTCTGCCACCCAAGTCTGTAAGTCCTCGATaGGACTTCCCATCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CPGTPSVGQTGCMPLPPKSVSPR*DFPSLP Trigger: TGGAAGAGATGGGAAGTCGCATCGAGGACTTACAGA...CTTGGGTGGCAGAGGCATGCAGCCAGTCTGGCCTACAGAGGGAGTTCCAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR CCA 90 bp | CATGCCTCTGCCACCCAAGTGCTGGGGTTGAAGGCATGTGCCATTATGGCCCAGGTTGTAGTCAGAGCTTaGAAATGTTCTTCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: HASATQVLGLKACAIMAQVVVRA*KCSSTS Trigger: AGAGGTTGAAGAACATTTCCAAGCTCTGACTACAAC...CTGGGCCATAATGGCACATGCCTTCAACCCCAGCACTTGGGTGGCAGAGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| 3UTR CAA 72 bp | AGAAGAACATTGGCCAGGTGGTGGTGGCACACATCTTaGATGCCATCACTCAGGAAGCAGAGAGAGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: RRTLARWWWHTS*MPSLRKQREAY Trigger: ATATGCCTCTCTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTGCCACCACCACCTGGCCAATGTTCTTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR CCA 90 bp | GTGCATTCTTCCGTGATTTGCAATAATTTGTCCTTTTTCACAAGTCTCGTCATTGTTGTAGTCAGAGCTTaGAAATGTTCTTCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: VHSSVICNNLSFFTSLVIVVVRA*KCSSTS Trigger: AGAGGTTGAAGAACATTTCCAAGCTCTGACTACAAC...AATGACGAGACTTGTGAAAAAGGACAAATTATTGCAAATCACGGAAGAATGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR CAA 90 bp | CACACATCTTTGATGCCATCACTCAGGAAGCAGAGAGAGGCATATAGGCATAGGTGTTGTAGTCAGAGCTaGGAAATGTTCTTCAACCTC | + |
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Preference number: 5 (lower is better) Translates to: HTSLMPSLRKQREAYRHRCCSQS*EMFFNL Trigger: GAGGTTGAAGAACATTTCCAAGCTCTGACTACAACA...CCTATGCCTATATGCCTCTCTCTGCTTCCTGAGTGATGGCATCAAAGATGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS-3UTR CAA 90 bp | TTGAAGGCATGTGCCATTATGGCCCAGCTTTGTTCTTCATTTGTTAAAGTGAATTGTTGTAGTCAGAGCTaGGAAATGTTCTTCAACCTC | + |
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Preference number: 5 (lower is better) Translates to: LKACAIMAQLCSSFVKVNCCSQS*EMFFNL Trigger: GAGGTTGAAGAACATTTCCAAGCTCTGACTACAACA...ATTCACTTTAACAAATGAAGAACAAAGCTGGGCCATAATGGCACATGCCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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| CDS TCA 72 bp | GTCGCTGGTTCTTTGATAGAATTCTCGATCCCGGCCTaGGTCATGAGGTCATCCACGTTTCTCTGTAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VAGSLIEFSIPA*VMRSSTFLCKS Trigger: GGACTTACAGAGAAACGTGGATGACCTCATGACTCAGGCCGGGATCGAGAATTCTATCAAAGAACCAGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166219.2 ENSMUST00000237192.2 |
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