Pregenerated sensors for HS3ST5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044499Ensembl transcript IDs: ENSMUST00000058738.11, ENSMUST00000167191.8, ENSMUST00000168572.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGTGATTTTCCAGCACGTGATTGACATGCGACAAATGACACCATaGAACATACCAGGAAACTATAGTGCAAAATCACCACAAGAACTT | + |
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Preference number: 1 (lower is better) Translates to: VVIFQHVIDMRQMTP*NIPGNYSAKSPQEL Trigger: AAGTTCTTGTGGTGATTTTGCACTATAGTTTCCTGGTATGTTCCATGGTGTCATTTGTCGCATGTCAATCACGTGCTGGAAAATCACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTATGGAAAAATGAATTaGGGAGCTGTGTCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SKEFSQRKTNLRISEVTFYGKMN*GAVSGK Trigger: TTTCCCAGACACAGCTCCCCAATTCATTTTTCCATA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| 3UTR GCA 72 bp | TGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATaGGTCTCTAGATACAACACATGGTGTTGTTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: WESAYFNVEGTP*VSRYNTWCCLL Trigger: TAGCAAACAACACCATGTGTTGTATCTAGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| 3UTR CCA 72 bp | TTCCAGCACGTGATTGACATGCGACAAATGACACCATaGAACATACCAGGAAACTATAGTGCAAAATCACCA | + |
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Preference number: 3 (lower is better) Translates to: FQHVIDMRQMTP*NIPGNYSAKSP Trigger: TGGTGATTTTGCACTATAGTTTCCTGGTATGTTCCATGGTGTCATTTGTCGCATGTCAATCACGTGCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTTATGGAAAAATGAATaGGGGAGCTGTGTCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SKEFSQRKTNLRISEVTFLWKNE*GSCVWE Trigger: TTCCCAGACACAGCTCCCCAATTCATTTTTCCATAA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCCAATTGATCTCATATTaGGTCACACACTGCATATGT | + |
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Preference number: 3 (lower is better) Translates to: SKEFSQRKTNLRISEVTFQLISY*VTHCIC Trigger: ACATATGCAGTGTGTGACCAAATATGAGATCAATTG...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCTACCTCTGGATGGATaGGCCCCTTGCTGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSLPLDG*APCCPP Trigger: TGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGGGTCTACCTCTGGATaGATGCGCCCCTTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSGSTSG*MRPLLP Trigger: GGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGATGGATGCGCCCCTTaGTGCCCGCCAGGCACTTAT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSDGCAP*CPPGTY Trigger: ATAAGTGCCTGGCGGGCAGCAAGGGGCGCATCCATC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGGAGGGGTCTACCTCTaGATGGATGCGCCCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSGGVYL*MDAPLA Trigger: AGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAAGCCTCTCTTAAACTaGAGGGCCCGCAGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSKPLLN*RARSGN Trigger: GTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTACCAGGTCATGGAGGTaGACCTGCTCCTTGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSTRSWR*TCSLEE Trigger: TTCTTCCAAGGAGCAGGTTCACCTCCATGACCTGGT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTTCTCTTGGGAAGCTTTaGCCACTGCAGGATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSSLGKL*PLQDGG Trigger: ACCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGA...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCCAAGCTCCCAACTCTaGCAACTAGATACAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSPSSQL*QLDTGG Trigger: GCCTCCTGTATCTAGTTGCCAGAGTTGGGAGCTTGG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGGTGAACCTGCTCCTTaGAAGAATTGCCCTTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSGEPAP*KNCPSG Trigger: TCCGGAAGGGCAATTCTTCCAAGGAGCAGGTTCACC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCCCTTCCGGAACTCATaGAGCAAGCCTCTCTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSPFRNS*SKPLLN Trigger: GTTTAAGAGAGGCTTGCTGCATGAGTTCCGGAAGGG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGGAAGCTTTGACCACTaGAGGATGGAGGTTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSGSFDH*RMEVEH Trigger: ATGCTCAACCTCCATCCTGCAGTGGTCAAAGCTTCC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAACTCAGCCTGGTTGTaGGCACCACCAAATCGACTT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSNSAWL*APPNRL Trigger: AAGTCGATTTGGTGGTGCCCACAACCAGGCTGAGTT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCCTACCTCTGGATGGATaGGCCCCTTGCTGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFLPLDG*APCCPP Trigger: TGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAG...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAAGAAGTGGATCTCTTaGGAAGCTTTGACCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSKKWIS*EALTTA Trigger: TGCAGTGGTCAAAGCTTCCCAAGAGATCCACTTCTT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGGGTCTACCTCTGGATaGATGCGCCCCTTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFGSTSG*MRPLLP Trigger: GGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTTCCTGTACCACTCAATaGCCTTGGCATAATTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSSCTTQ*PWHNSH Trigger: ATGAGAATTATGCCAAGGGCATTGAGTGGTACAGGA...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAGTATAATCAGAAATTaGTCTTGTGGTCGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSSIIRN*SCGRLP Trigger: AGGGAGCCGACCACAAGAGCAATTTCTGATTATACT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGGAGGGGTCTACCTCTaGATGGATGCGCCCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFGGVYL*MDAPLA Trigger: AGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCAACAGCTTGATGGATaGGTTCATCTTGTAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSQQLDG*VHLVNP Trigger: AGGATTTACAAGATGAACTCATCCATCAAGCTGTTG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTTTCTGTGATGAAATATaGCGGGCTCTTTTCAATCGT | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSFCDEI*RALFNR Trigger: ACGATTGAAAAGAGCCCGGCATATTTCATCACAGAA...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTTCATTGTCAAAGAAGTaGATCTCTTGGGAAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSSLSKK*ISWEAL Trigger: CAAAGCTTCCCAAGAGATCCACTTCTTTGACAATGA...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAAATATAAATTGTACTaGCTTATCCTCGGAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SCVWESAYFNVEGTPCVSKYKLY*LILGGR Trigger: CCTTCCTCCGAGGATAAGTCAGTACAATTTATATTT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCAAGCCTCTCTTAAACTaGAGGGCCCGCAGTGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFKPLLN*RARSGN Trigger: GTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCACCAGGTCATGGAGGTaGACCTGCTCCTTGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFTRSWR*TCSLEE Trigger: TTCTTCCAAGGAGCAGGTTCACCTCCATGACCTGGT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTCTCTTGGGAAGCTTTaGCCACTGCAGGATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFSLGKL*PLQDGG Trigger: ACCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCCCAAGCTCCCAACTCTaGCAACTAGATACAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFPSSQL*QLDTGG Trigger: GCCTCCTGTATCTAGTTGCCAGAGTTGGGAGCTTGG...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGGTGAACCTGCTCCTTaGAAGAATTGCCCTTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFGEPAP*KNCPSG Trigger: TCCGGAAGGGCAATTCTTCCAAGGAGCAGGTTCACC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCCCCTTCCGGAACTCATaGAGCAAGCCTCTCTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFPFRNS*SKPLLN Trigger: GTTTAAGAGAGGCTTGCTGCATGAGTTCCGGAAGGG...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGCTCCTTGGAAGAATTaGCCTTCCGGAACTCATGCA | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFAPWKN*PSGTHA Trigger: TGCATGAGTTCCGGAAGGGCAATTCTTCCAAGGAGC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGGCTCTTTTCAATCGTaGTTTGCTGAGGGTAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFGSFQS*FAEGRK Trigger: TTTCCTACCCTCAGCAAATCACGATTGAAAAGAGCC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTCCTGTACCACTCAATaGCCTTGGCATAATTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFSCTTQ*PWHNSH Trigger: ATGAGAATTATGCCAAGGGCATTGAGTGGTACAGGA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCAGTATAATCAGAAATTaGTCTTGTGGTCGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFSIIRN*SCGRLP Trigger: AGGGAGCCGACCACAAGAGCAATTTCTGATTATACT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCCAACAGCTTGATGGATaGGTTCATCTTGTAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFQQLDG*VHLVNP Trigger: AGGATTTACAAGATGAACTCATCCATCAAGCTGTTG...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTTCTGTGATGAAATATaGCGGGCTCTTTTCAATCGT | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFFCDEI*RALFNR Trigger: ACGATTGAAAAGAGCCCGGCATATTTCATCACAGAA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTCATTGTCAAAGAAGTaGATCTCTTGGGAAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFSLSKK*ISWEAL Trigger: CAAAGCTTCCCAAGAGATCCACTTCTTTGACAATGA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCAAATATAAATTGTACTaGCTTATCCTCGGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKEFSQRKTNLRISEVTFKYKLY*LILGGR Trigger: CCTTCCTCCGAGGATAAGTCAGTACAATTTATATTT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
||
| CDS GCA 90 bp | GAAGAATTGCCCTTCCGGAACTCATGCAGCAAGCCTCTCTTAAACTaGAGGGCCCGCAGTGGCAACTCAGCCTGGTTGTGGGCACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EELPFRNSCSKPLLN*RARSGNSAWLWAPP Trigger: TGGTGGTGCCCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTTGCTGCATGAGTTCCGGAAGGGCAATTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 90 bp | AGCAAGCCTCTCTTAAACTGCAGGGCCCGCAGTGGCAACTCAGCCTaGTTGTGGGCACCACCAAATCGACTTTCAACAGGGCAAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKPLLNCRARSGNSA*LWAPPNRLSTGQMG Trigger: GCCCATTTGCCCTGTTGAAAGTCGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 90 bp | CCGGAACTCATGCAGCAAGCCTCTCTTAAACTGCAGGGCCCGCAGTaGCAACTCAGCCTGGTTGTGGGCACCACCAAATCGACTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PELMQQASLKLQGPQ*QLSLVVGTTKSTFN Trigger: GTTGAAAGTCGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTTGCTGCATGAGTTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS CCA 90 bp | TTTCAACAGGGCAAATGGGCTGGAGCCTATCCAAGCTCCCAACTCTaGCAACTAGATACAGGAGGCTCCCAACAGCAAGGCTTCCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FQQGKWAGAYPSSQL*QLDTGGSQQQGFPV Trigger: TACTGGGAAGCCTTGCTGTTGGGAGCCTCCTGTATCTAGTTGCCAGAGTTGGGAGCTTGGATAGGCTCCAGCCCATTTGCCCTGTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 90 bp | CAGCCTGGTTGTGGGCACCACCAAATCGACTTTCAACAGGGCAAATaGGCTGGAGCCTATCCAAGCTCCCAACTCTGGCAACTAGATACA | + |
|
Preference number: 5 (lower is better) Translates to: QPGCGHHQIDFQQGK*AGAYPSSQLWQLDT Trigger: TGTATCTAGTTGCCAGAGTTGGGAGCTTGGATAGGCTCCAGCCCATTTGCCCTGTTGAAAGTCGATTTGGTGGTGCCCACAACCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTTCTCTAGCAGGGCCCTaGTGCCCCCTTTTCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSSLAGP*CPLFSP Trigger: GGGTGAGAAAAGGGGGCACAAGGGCCCTGCTAGAGA...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 90 bp | TTGTCAAAGAAGTGGATCTCTTGGGAAGCTTTGACCACTGCAGGATaGAGGTTGAGCATCTCTAGCAGGGCCCTTGTGCCCCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSKKWISWEALTTAG*RLSISSRALVPPFL Trigger: GAGAAAAGGGGGCACAAGGGCCCTGCTAGAGATGCTCAACCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGATCCACTTCTTTGACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGGCAACTCAGCCTGGTaGTGGGCACCACCAAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSGNSAW*WAPPNR Trigger: TCGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTACTGCAGGATGGAGGTaGAGCATCTCTAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSTAGWR*SISSRA Trigger: GGCCCTGCTAGAGATGCTCAACCTCCATCCTGCAGT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 90 bp | AAGAATTTGCGCAATTTGGTAATGACGGAGGGGTCTACCTCTGGATaGATGCGCCCCTTGCTGCCCGCCAGGCACTTATTAAAGATAATG | + |
|
Preference number: 5 (lower is better) Translates to: KNLRNLVMTEGSTSG*MRPLLPARHLLKIM Trigger: CATTATCTTTAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCCGTCATTACCAAATTGCGCAAATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 90 bp | ATGAAAGAATTTGCGCAATTTGGTAATGACGGAGGGGTCTACCTCTaGATGGATGCGCCCCTTGCTGCCCGCCAGGCACTTATTAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MKEFAQFGNDGGVYL*MDAPLAARQALIKD Trigger: ATCTTTAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCCGTCATTACCAAATTGCGCAAATTCTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTTGCTCCTTGGAAGAATaGCCCTTCCGGAACTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSCSLEE*PFRNSC Trigger: GCATGAGTTCCGGAAGGGCAATTCTTCCAAGGAGCA...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCCAATGATAATGGCTTaGGGGAGCTGTTGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSPMIMA*GSCWTR Trigger: CCTGGTCCAACAGCTCCCCAAAGCCATTATCATTGG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTATCTCTTGGGAAGCTTaGACCACTGCAGGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSISWEA*TTAGWR Trigger: CCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGAT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAAAGAAGTGGATCTCTaGGGAAGCTTTGACCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSKEVDL*GSFDHC Trigger: GCAGTGGTCAAAGCTTCCCAAGAGATCCACTTCTTT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTGAGTATAATCAGAAATaGCTCTTGTGGTCGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSEYNQK*LLWSAP Trigger: GGGAGCCGACCACAAGAGCAATTTCTGATTATACTC...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCTGGTCCTAACCGCCTaGTATTTCGTGTTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSLVLTA*YFVFTS Trigger: TGAAGTGAACACGAAATACAAGGCGGTTAGGACCAG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTAAGAATTTGCGCAATTaGGTAATGACGGAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSKNLRN*VMTEGS Trigger: AGACCCCTCCGTCATTACCAAATTGCGCAAATTCTT...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGTCTGGGAAAGTGCATATTTTAATGTAGAGGGGACGCCATGCGTCTCTCTTTTCAATCGTGATTaGCTGAGGGTAGGAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCVWESAYFNVEGTPCVSLFNRD*LRVGKR Trigger: CCTTTTTCCTACCCTCAGCAAATCACGATTGAAAAG...AGAGACGCATGGCGTCCCCTCTACATTAAAATATGCACTTTCCCAGACACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGGCAACTCAGCCTGGTaGTGGGCACCACCAAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFGNSAW*WAPPNR Trigger: TCGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCACTGCAGGATGGAGGTaGAGCATCTCTAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFTAGWR*SISSRA Trigger: GGCCCTGCTAGAGATGCTCAACCTCCATCCTGCAGT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS GCA 90 bp | GTTCATCTTGTAAATCCTTTCCGGAACCTCTTCTGTGATGAAATATaGCGGGCTCTTTTCAATCGTGATTTGCTGAGGGTAGGAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHLVNPFRNLFCDEI*RALFNRDLLRVGKR Trigger: CCTTTTTCCTACCCTCAGCAAATCACGATTGAAAAGAGCCCGGCATATTTCATCACAGAAGAGGTTCCGGAAAGGATTTACAAGATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS CCA 90 bp | GAGGGTAGGAAAAAGGCATCTTTTTCCTGTACCACTCAATGCCCTTaGCATAATTCTCATCATTGTCAAAGAAGTGGATCTCTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGRKKASFSCTTQCP*HNSHHCQRSGSLGK Trigger: CTTCCCAAGAGATCCACTTCTTTGACAATGATGAGAATTATGCCAAGGGCATTGAGTGGTACAGGAAAAAGATGCCTTTTTCCTACCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCTGCTCCTTGGAAGAATaGCCCTTCCGGAACTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFCSLEE*PFRNSC Trigger: GCATGAGTTCCGGAAGGGCAATTCTTCCAAGGAGCA...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCATCTCTTGGGAAGCTTaGACCACTGCAGGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFISWEA*TTAGWR Trigger: CCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGAT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
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| CDS GCA 90 bp | TTTGCTGAGGGTAGGAAAAAGGCATCTTTTTCCTGTACCACTCAATaGCCTTGGCATAATTCTCATCATTGTCAAAGAAGTGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FAEGRKKASFSCTTQ*PWHNSHHCQRSGSL Trigger: AAGAGATCCACTTCTTTGACAATGATGAGAATTATGCCAAGGGCATTGAGTGGTACAGGAAAAAGATGCCTTTTTCCTACCCTCAGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCAAAGAAGTGGATCTCTaGGGAAGCTTTGACCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFKEVDL*GSFDHC Trigger: GCAGTGGTCAAAGCTTCCCAAGAGATCCACTTCTTT...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCGAGTATAATCAGAAATaGCTCTTGTGGTCGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFEYNQK*LLWSAP Trigger: GGGAGCCGACCACAAGAGCAATTTCTGATTATACTC...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGGAATTTTCTCAAAGGAAGACTAACTTGAGAATATCTGAGGTCACTTTCCTGGTCCTAACCGCCTaGTATTTCGTGTTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKEFSQRKTNLRISEVTFLVLTA*YFVFTS Trigger: TGAAGTGAACACGAAATACAAGGCGGTTAGGACCAG...GAAAGTGACCTCAGATATTCTCAAGTTAGTCTTCCTTTGAGAAAATTCCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058738.11 ENSMUST00000168572.8 |
||
| CDS GCA 72 bp | CCCTTCCGGAACTCATGCAGCAAGCCTCTCTTAAACTaGAGGGCCCGCAGTGGCAACTCAGCCTGGTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PFRNSCSKPLLN*RARSGNSAWLW Trigger: CCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTTGCTGCATGAGTTCCGGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS CCA 72 bp | ATGCAGCAAGCCTCTCTTAAACTGCAGGGCCCGCAGTaGCAACTCAGCCTGGTTGTGGGCACCACCAAATCG | + |
|
Preference number: 6 (lower is better) Translates to: MQQASLKLQGPQ*QLSLVVGTTKS Trigger: CGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTTTAAGAGAGGCTTGCTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | TTTGCGCAATTTGGTAATGACGGAGGGGTCTACCTCTaGATGGATGCGCCCCTTGCTGCCCGCCAGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: FAQFGNDGGVYL*MDAPLAARQAL Trigger: AAGTGCCTGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCCGTCATTACCAAATTGCGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS CCA 72 bp | GGCAAATGGGCTGGAGCCTATCCAAGCTCCCAACTCTaGCAACTAGATACAGGAGGCTCCCAACAGCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GKWAGAYPSSQL*QLDTGGSQQQG Trigger: GCCTTGCTGTTGGGAGCCTCCTGTATCTAGTTGCCAGAGTTGGGAGCTTGGATAGGCTCCAGCCCATTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | AACTGCAGGGCCCGCAGTGGCAACTCAGCCTGGTTGTaGGCACCACCAAATCGACTTTCAACAGGGCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: NCRARSGNSAWL*APPNRLSTGQM Trigger: CATTTGCCCTGTTGAAAGTCGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | CTCTTAAACTGCAGGGCCCGCAGTGGCAACTCAGCCTaGTTGTGGGCACCACCAAATCGACTTTCAACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLNCRARSGNSA*LWAPPNRLSTG Trigger: CCCTGTTGAAAGTCGATTTGGTGGTGCCCACAACCAGGCTGAGTTGCCACTGCGGGCCCTGCAGTTTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | CGCAATTTGGTAATGACGGAGGGGTCTACCTCTGGATaGATGCGCCCCTTGCTGCCCGCCAGGCACTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: RNLVMTEGSTSG*MRPLLPARHLL Trigger: TAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCCGTCATTACCAAATTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | GCTGTTGGACCAGGTCATGGAGGTGAACCTGCTCCTTaGAAGAATTGCCCTTCCGGAACTCATGCAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVGPGHGGEPAP*KNCPSGTHAAS Trigger: GCTTGCTGCATGAGTTCCGGAAGGGCAATTCTTCCAAGGAGCAGGTTCACCTCCATGACCTGGTCCAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | AAGTGGATCTCTTGGGAAGCTTTGACCACTGCAGGATaGAGGTTGAGCATCTCTAGCAGGGCCCTTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KWISWEALTTAG*RLSISSRALVP Trigger: GGGCACAAGGGCCCTGCTAGAGATGCTCAACCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGATCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CCA 72 bp | TGTGGGCACCACCAAATCGACTTTCAACAGGGCAAATaGGCTGGAGCCTATCCAAGCTCCCAACTCTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: CGHHQIDFQQGK*AGAYPSSQLWQ Trigger: TTGCCAGAGTTGGGAGCTTGGATAGGCTCCAGCCCATTTGCCCTGTTGAAAGTCGATTTGGTGGTGCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CAA 72 bp | ATCTCTTGGGAAGCTTTGACCACTGCAGGATGGAGGTaGAGCATCTCTAGCAGGGCCCTTGTGCCCCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ISWEALTTAGWR*SISSRALVPPF Trigger: AAAAGGGGGCACAAGGGCCCTGCTAGAGATGCTCAACCTCCATCCTGCAGTGGTCAAAGCTTCCCAAGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CAA 90 bp | AATTTGGTAATGACGGAGGGGTCTACCTCTGGATGGATGCGCCCCTaGCTGCCCGCCAGGCACTTATTAAAGATAATGTTAAATCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLVMTEGSTSGWMRP*LPARHLLKIMLNLR Trigger: TCTGAGATTTAACATTATCTTTAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATCCATCCAGAGGTAGACCCCTCCGTCATTACCAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CAA 90 bp | AACCAGCGCTCCAGATGTTTTGTGTATATGCTGGTCCTAACCGCCTaGTATTTCGTGTTCACTTCACAGGTATTAGGGTCTATAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NQRSRCFVYMLVLTA*YFVFTSQVLGSIAS Trigger: ACTGGCTATAGACCCTAATACCTGTGAAGTGAACACGAAATACAAGGCGGTTAGGACCAGCATATACACAAAACATCTGGAGCGCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
||
| CDS CAA 72 bp | TCCAGATGTTTTGTGTATATGCTGGTCCTAACCGCCTaGTATTTCGTGTTCACTTCACAGGTATTAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SRCFVYMLVLTA*YFVFTSQVLGS Trigger: AGACCCTAATACCTGTGAAGTGAACACGAAATACAAGGCGGTTAGGACCAGCATATACACAAAACATCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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| CDS GCA 72 bp | GGTAGGAAAAAGGCATCTTTTTCCTGTACCACTCAATaGCCTTGGCATAATTCTCATCATTGTCAAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GRKKASFSCTTQ*PWHNSHHCQRS Trigger: ACTTCTTTGACAATGATGAGAATTATGCCAAGGGCATTGAGTGGTACAGGAAAAAGATGCCTTTTTCCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000058738.11 ENSMUST00000167191.8 ENSMUST00000168572.8 |
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