Pregenerated sensors for HS3ST4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078591Ensembl transcript IDs: ENSMUST00000106437.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGGTTGTGGGATGAGGCCTTTGATGGGAAGGCTAGACAGGCCTTaGAGGGAGGATATTGTTCCCTGGGAGTCTTGGTGCTCTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: KGCGMRPLMGRLDRP*REDIVPWESWCSQS Trigger: TGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCTTCCCATCAAAGGCCTCATCCCACAACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 90 bp | TGCCTTTGCCTTCATATTGTGGGGAGGGAGGAAATCAAAGGGTTGTaGGATGAGGCCTTTGATGGGAAGGCTAGACAGGCCTTGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: CLCLHIVGREEIKGL*DEAFDGKARQALEG Trigger: TCCCTCCAAGGCCTGTCTAGCCTTCCCATCAAAGGCCTCATCCCACAACCCTTTGATTTCCTCCCTCCCCACAATATGAAGGCAAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 90 bp | AGGCTAGACAGGCCTTGGAGGGAGGATATTGTTCCCTGGGAGTCTTaGTGCTCTCAGTCACAAATAGCATTCTGGAGAGATGCCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: RLDRPWREDIVPWES*CSQSQIAFWRDARA Trigger: TGCTCTGGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 90 bp | CTAGACAGGCCTTGGAGGGAGGATATTGTTCCCTGGGAGTCTTGGTaGTCTCAGTCACAAATAGCATTCTGGAGAGATGCCAGAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LDRPWREDIVPWESW*SQSQIAFWRDARAE Trigger: TTCTGCTCTGGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 90 bp | CACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTaGCCTCCTCAATCCACTTCACACTGCAAAGCAGCAGCGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: HFIWQPLKRMSADSP*PPQSTSHCKAAAFL Trigger: CAAGAACGCTGCTGCTTTGCAGTGTGAAGTGGATTGAGGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 90 bp | TTGATGGGAAGGCTAGACAGGCCTTGGAGGGAGGATATTGTTCCCTaGGAGTCTTGGTGCTCTCAGTCACAAATAGCATTCTGGAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: LMGRLDRPWREDIVP*ESWCSQSQIAFWRD Trigger: ATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCTTCCCATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 90 bp | TCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTaGCTTTGGAGATCTGAGAAACAAGTGCTTTATGTCAAACGCTGT | + |
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Preference number: 1 (lower is better) Translates to: STLPTHTHFQFYYNS*LWRSEKQVLYVKRC Trigger: ACAGCGTTTGACATAAAGCACTTGTTTCTCAGATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CAA 90 bp | AAAGGGTTGTGGGATGAGGCCTTTGATGGGAAGGCTAGACAGGCCTaGGAGGGAGGATATTGTTCCCTGGGAGTCTTGGTGCTCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KGLWDEAFDGKARQA*EGGYCSLGVLVLSV Trigger: GACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCTTCCCATCAAAGGCCTCATCCCACAACCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CAA 90 bp | GCATGCCTTTGCCTTCATATTGTGGGGAGGGAGGAAATCAAAGGGTaGTGGGATGAGGCCTTTGATGGGAAGGCTAGACAGGCCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ACLCLHIVGREEIKG*WDEAFDGKARQALE Trigger: CTCCAAGGCCTGTCTAGCCTTCCCATCAAAGGCCTCATCCCACAACCCTTTGATTTCCTCCCTCCCCACAATATGAAGGCAAAGGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CAA 90 bp | AAGGCTAGACAGGCCTTGGAGGGAGGATATTGTTCCCTGGGAGTCTaGGTGCTCTCAGTCACAAATAGCATTCTGGAGAGATGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KARQALEGGYCSLGV*VLSVTNSILERCQS Trigger: GCTCTGGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTGCCCTCCTCCCCAGGGATGCCATaGGATCTATACCTCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: TLYLAALEKDVCRQSLPSSPGMP*DLYLCL Trigger: TAGGCAGAGGTATAGATCTCATGGCATCCCTGGGGA...GGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CAA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTaGCCCTCCTCAATCCACTTCACACTGCAAAGCAGCAGCGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TLYLAALEKDVCRQS*PSSIHFTLQSSSVL Trigger: AAGAACGCTGCTGCTTTGCAGTGTGAAGTGGATTGAGGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCGGTTGGCAATCTACTTaGTACTCCAGCATGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIGWQST*YSSMAD Trigger: GTCAGCCATGCTGGAGTACCAAGTAGATTGCCAACC...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCGAGGATATTGTTCCCTaGGAGTCTTGGTGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIEDIVP*ESWCSQ Trigger: CTGAGAGCACCAAGACTCCCAGGGAACAATATCCTC...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTGCCCTCCAGCATTCTGGAGAGATaGCAGAGCAGAAGTTTATGT | + |
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Preference number: 2 (lower is better) Translates to: TLYLAALEKDVCRQSLPSSILER*QSRSLC Trigger: ACATAAACTTCTGCTCTGGCATCTCTCCAGAATGCT...GGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCTCACAAATAGCATTCTaGAGAGATGCCAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LKTQMLSPCSGSIHVGQISQIAF*RDARAE Trigger: TTCTGCTCTGGCATCTCTCCAGAATGCTATTTGTGA...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCCATAGCATCTGTCTGTaGCATTGGAAGATGTTTATC | + |
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Preference number: 2 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIHSICL*HWKMFI Trigger: GATAAACATCTTCCAATGTCACAGACAGATGCTATG...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCCCCTGGGAGTCTTGGTaGTCTCAGTCACAAATAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPHSYTFPILLQFLALEIPWESW*SQSQIA Trigger: TGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGG...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGAAGCAGCAGCGTTCTTaGCAATGGCCCAATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: FNSPHSYTFPILLQFLALKQQRS*QWPNEC Trigger: GCATTCATTGGGCCATTGGCAAGAACGCTGCTGCTT...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCGAAATCAAAGGGTTGTaGGATGAGGCCTTTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: SPHSYTFPILLQFLALEIEIKGL*DEAFDG Trigger: CCCATCAAAGGCCTCATCCCACAACCCTTTGATTTC...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGCTATCTCCCTGTTCTaGGAGCATTCATGTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FNSPHSYTFPILLQFLALAISLF*EHSCRP Trigger: TGGCCTACATGAATGCTCCCAGAACAGGGAGATAGC...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGGCTCAAAACACAGATaGTATCTCCCTGTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FNSPHSYTFPILLQFLALGSKHR*YLPVLG Trigger: TCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCC...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGCAATCCACTTCACACTaGAAAGCAGCAGCGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: FNSPHSYTFPILLQFLALQSTSH*KAAAFL Trigger: CAAGAACGCTGCTGCTTTGCAGTGTGAAGTGGATTG...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGTTATTTGGCAGCCCTTaGAAAGGATGTCTGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: FNSPHSYTFPILLQFLALLFGSP*KGCLQT Trigger: TGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAA...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCCTTCCTCTTCACATTTaGAAGGGTGTCTGTGAACAA | + |
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Preference number: 2 (lower is better) Translates to: SPHSYTFPILLQFLALEILPLHI*KGVCEQ Trigger: TTGTTCACAGACACCCTTCCAAATGTGAAGAGGAAG...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 72 bp | TCTTTGCCTCCAGAGCAGAGCCTATCCCTTAGAGCATaGCCCAGGACCACGATCCTTAGGAACAAGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: SLPPEQSLSLRA*PRTTILRNKGL Trigger: AAGACCCTTGTTCCTAAGGATCGTGGTCCTGGGGCATGCTCTAAGGGATAGGCTCTGCTCTGGAGGCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR TCA 72 bp | GATAAGGGGCCACCCACCAAGAGGCTGGGGTTTGCCTaGTACCCACAGTTACAAGCATTCATCTTTGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: DKGPPTKRLGFA*YPQLQAFIFAN Trigger: GTTGGCAAAGATGAATGCTTGTAACTGTGGGTATCAGGCAAACCCCAGCCTCTTGGTGGGTGGCCCCTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 72 bp | TGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTaGCCTCCTCAATCCACTTCACACTGCAAAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: WQPLKRMSADSP*PPQSTSHCKAA Trigger: TGCTGCTTTGCAGTGTGAAGTGGATTGAGGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR TCA 72 bp | CAACCAGACATTGTTGATTCCTCCCCAGGGATGCCATaGGATCTATACCTCTGCCTAAGCCCACGACATTGG | + |
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Preference number: 3 (lower is better) Translates to: QPDIVDSSPGMP*DLYLCLSPRHW Trigger: CCAATGTCGTGGGCTTAGGCAGAGGTATAGATCTCATGGCATCCCTGGGGAGGAATCAACAATGTCTGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 72 bp | CCTTGGAGGGAGGATATTGTTCCCTGGGAGTCTTGGTaGTCTCAGTCACAAATAGCATTCTGGAGAGATGCC | + |
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Preference number: 3 (lower is better) Translates to: PWREDIVPWESW*SQSQIAFWRDA Trigger: GGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 72 bp | GGTGTCTGTGAACAACTAACAAGCAAGCTCTGTCTTTaGCTCCAGAGCAGAGCCTATCCCTTAGAGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: GVCEQLTSKLCL*LQSRAYPLEHA Trigger: GGCATGCTCTAAGGGATAGGCTCTGCTCTGGAGGCAAAGACAGAGCTTGCTTGTTAGTTGTTCACAGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 72 bp | AGGCTAGACAGGCCTTGGAGGGAGGATATTGTTCCCTaGGAGTCTTGGTGCTCTCAGTCACAAATAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: RLDRPWREDIVP*ESWCSQSQIAF Trigger: GAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTGCCCTCCAGAGAGAGACCCACCTaGGATGGCTCTCAGATAGAA | + |
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Preference number: 3 (lower is better) Translates to: TLYLAALEKDVCRQSLPSRERPT*DGSQIE Trigger: TTCTATCTGAGAGCCATCCAAGGTGGGTCTCTCTCT...GGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 72 bp | GGGACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTaGAGACAGTCCTTGCCCTCCTCAATCCACTTCACA | + |
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Preference number: 3 (lower is better) Translates to: GTLYLAALEKDV*RQSLPSSIHFT Trigger: TGTGAAGTGGATTGAGGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 72 bp | AGGCCTTGGAGGGAGGATATTGTTCCCTGGGAGTCTTaGTGCTCTCAGTCACAAATAGCATTCTGGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: RPWREDIVPWES*CSQSQIAFWRD Trigger: ATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 72 bp | CTCAGGGCTCAAAACACAGATGCTATCTCCCTGTTCTaGGAGCATTCATGTAGGCCAGATCCCAATATGAGG | + |
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Preference number: 3 (lower is better) Translates to: LRAQNTDAISLF*EHSCRPDPNMR Trigger: CCTCATATTGGGATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTCACACTGCAAAGCAGCAGCGTTCTTGCCAATGGCCCAATGAATGCCATCCATCTGTCTGTGACATaGGAAGATGTTTATCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: HFTLQSSSVLANGPMNAIHLSVT*EDVYPL Trigger: AAGAGGATAAACATCTTCCAATGTCACAGACAGATG...GATGGCATTCATTGGGCCATTGGCAAGAACGCTGCTGCTTTGCAGTGTGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR TCA 72 bp | GTACTCCCTTCCTCTTCACATTTGGAAGGGTGTCTGTaGACAACTAACAAGCAAGCTCTGTCTTTGCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLPSSSHLEGCL*TTNKQALSLPP Trigger: TGGAGGCAAAGACAGAGCTTGCTTGTTAGTTGTTCACAGACACCCTTCCAAATGTGAAGAGGAAGGGAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCCTTGGAGGGAGGATATaGTTCCCTGGGAGTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SPHSYTFPILLQFLALEILGGRI*FPGSLG Trigger: ACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAG...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCAAGGCTAGACAGGCCTaGGAGGGAGGATATTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SPHSYTFPILLQFLALEIKARQA*EGGYCS Trigger: GGAACAATATCCTCCCTCCAAGGCCTGTCTAGCCTT...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR GCA 72 bp | GTTTGCCTGATACCCACAGTTACAAGCATTCATCTTTaGCAACCTCAGGGCTCAAAACACAGATGCTATCTC | + |
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Preference number: 3 (lower is better) Translates to: VCLIPTVTSIHL*QPQGSKHRCYL Trigger: GAGATAGCATCTGTGTTTTGAGCCCTGAGGTTGGCAAAGATGAATGCTTGTAACTGTGGGTATCAGGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGTGTTCCCTGGGAGTCTaGGTGCTCTCAGTCACAAAT | + |
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Preference number: 3 (lower is better) Translates to: FNSPHSYTFPILLQFLALCSLGV*VLSVTN Trigger: ATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACA...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCTACAAGCATTCATCTTaGCCAACCTCAGGGCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: SPHSYTFPILLQFLALEIYKHSS*PTSGLK Trigger: TTTGAGCCCTGAGGTTGGCAAAGATGAATGCTTGTA...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAAGGGACACTTTATTaGGCAGCCCTTGAAAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: FNSPHSYTFPILLQFLALEGTLY*AALEKD Trigger: ATCCTTTTCAAGGGCTGCCAAATAAAGTGTCCCTTC...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| 3UTR CCA 72 bp | CATACACATTTCCAATTTTACTACAATTCCTGGCTTTaGAGATCTGAGAAACAAGTGCTTTATGTCAAACGC | + |
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Preference number: 3 (lower is better) Translates to: HTHFQFYYNSWL*RSEKQVLYVKR Trigger: GCGTTTGACATAAAGCACTTGTTTCTCAGATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| CDS-3UTR GCA 90 bp | CACTTCACACTGCAAAGCAGCAGCGTTCTTGCCAATGGCCCAATGAATGCCATCCGGCTCTACGCCCACTaGCCTTACGTCCGGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: HFTLQSSSVLANGPMNAIRLYAH*PYVRVD Trigger: GTCCACCCGGACGTAAGGGCAGTGGGCGTAGAGCCG...GATGGCATTCATTGGGCCATTGGCAAGAACGCTGCTGCTTTGCAGTGTGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| CDS-3UTR TCA 90 bp | ATCTTTGCCAACCTCAGGGCTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGGGGACAGGGTGCACATaGAGAGCAGCTTGCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: IFANLRAQNTDAISLFWEGTGCT*RAACAP Trigger: CGGCGCGCAAGCTGCTCTTCATGTGCACCCTGTCCC...CTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCCCTGAGGTTGGCAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGAGTCTTGGTGCTCTCAGTCACAAATAGCATTCTGGAGAGATGCCAGCCGATGATCAGTGCCTaGGGCAGCTTCTTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLVLSVTNSILERCQPMISA*GSFFSP Trigger: TGGGGAGAAGAAGCTGCCCCAGGCACTGATCATCGG...CTGGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGGGAGTCTTGGTGCTCTCAGTCACAAATAGCATTCTGGAGAGATGCCAGTCCGACCTTTGCTCTTaGCCAAACATCTTGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLVLSVTNSILERCQSDLCS*PNILGR Trigger: GCGCCCCAAGATGTTTGGGCAAGAGCAAAGGTCGGA...CTGGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| 3UTR CAA 72 bp | TTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTaGCCCTCCTCAATCCACTTCACACTGCAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAALEKDVCRQS*PSSIHFTLQSS Trigger: GCTGCTTTGCAGTGTGAAGTGGATTGAGGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR TCA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTGCCCTCCCCAGGGTCCGGTTTTTaGAGGCCAGAACCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLYLAALEKDVCRQSLPSPGSGF*RPEPQR Trigger: CCTTTGAGGTTCTGGCCTTCAAAAACCGGACCCTGG...GGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGAGCGCCAGCGGGAACTaGAGCGAACCCGAGCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNSPHSYTFPILLQFLALSASGN*SEPEPP Trigger: GGGCGGCTCGGGTTCGCTGCAGTTCCCGCTGGCGCT...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTGCCCTCCTCCTTGGCCATAGAGTaGATGCGCTTGGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLYLAALEKDVCRQSLPSSLAIE*MRLGAS Trigger: TGAGGCTCCCAAGCGCATCCACTCTATGGCCAAGGA...GGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCGGAAATCCTGGACCTTaGCCATCTCCCCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIGNPGP*PSPLQG Trigger: ACCCTGCAGGGGAGATGGCCAAGGTCCAGGATTTCC...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCGGGTCAATTCGGGGATaGGTCCGACCTTTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIGSIRG*VRPLLL Trigger: CAAGAGCAAAGGTCGGACTCATCCCCGAATTGACCC...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| 3UTR CAA 72 bp | CAGGCCTTGGAGGGAGGATATTGTTCCCTGGGAGTCTaGGTGCTCTCAGTCACAAATAGCATTCTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALEGGYCSLGV*VLSVTNSILER Trigger: TCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGAACAATATCCTCCCTCCAAGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| 3UTR CAA 72 bp | TGCCTTCATATTGTGGGGAGGGAGGAAATCAAAGGGTaGTGGGATGAGGCCTTTGATGGGAAGGCTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLHIVGREEIKG*WDEAFDGKARQ Trigger: CTGTCTAGCCTTCCCATCAAAGGCCTCATCCCACAACCCTTTGATTTCCTCCCTCCCCACAATATGAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTTATTTGGCAGCCCTTGAAAAGGATGTCTGCAGACAGTCCTTGCCCTCCAGTCAGAAATGGCCCTaGTCACTGGGTTTCGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: TLYLAALEKDVCRQSLPSSQKWP*SLGFVP Trigger: TGGTACGAAACCCAGTGACCAGGGCCATTTCTGACT...GGAGGGCAAGGACTGTCTGCAGACATCCTTTTCAAGGGCTGCCAAATAAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| 3UTR CAA 72 bp | AACCTGGGGGATTTGGGACTCTGCTTAAGAGTATCCTaGCTATTCATTAGCCTTCCCTCCACACCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLGDLGLCLRVS*LFISLPSTPSA Trigger: GGCTGATGGTGTGGAGGGAAGGCTAATGAATAGCAAGGATACTCTTAAGCAGAGTCCCAAATCCCCCAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGCCAACCTCAGGGCTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGGATGAGTCCGACCTTTaGTCTTGCCCAAACATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFANLRAQNTDAISLFWEDESDL*SCPNIL Trigger: CAAGATGTTTGGGCAAGAGCAAAGGTCGGACTCATC...CTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCCCTGAGGTTGGCAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCCTGACAAACAGGATCTaGGAAAGGGGAAAGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKTQMLSPCSGSIHVGQILTNRI*ERGKYC Trigger: GCAGTACTTTCCCCTTTCTCAGATCCTGTTTGTCAG...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGCCAACCTCAGGGCTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGTCTATGGATGACATCTaGGTCAATTCGGGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFANLRAQNTDAISLFWESMDDI*VNSGMS Trigger: ACTCATCCCCGAATTGACCCAGATGTCATCCATAGA...CTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCCCTGAGGTTGGCAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGACCCCGATGATCAGTaGCTGGGGCAGCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FNSPHSYTFPILLQFLALDPDDQ*LGQLLL Trigger: GAGAAGAAGCTGCCCCAGGCACTGATCATCGGGGTC...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCGAAAGGGGAAAGTACTaGAGCCAGTTCTCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPHSYTFPILLQFLALEIERGKY*SQFSRC Trigger: GCACCTGGAGAACTGGCTGCAGTACTTTCCCCTTTC...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTTGCCAACCTCAGGGCTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGGGTAAAACATCATGTTaGAGGGTTTGTAGAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFANLRAQNTDAISLFWEGKTSC*RVCRIS Trigger: GGAAATTCTACAAACCCTTCAACATGATGTTTTACC...CTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCCCTGAGGTTGGCAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCAAGCATAGATCCCAATaGGAATGGCGCTCCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHSYTFPILLQFLALEIKHRSQ*EWRSKR Trigger: CCTCTTGGAGCGCCATTCGCATTGGGATCTATGCTT...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCGGGTATAGTCAGAAATaGCCCTGGTCACTGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPHSYTFPILLQFLALEIGYSQK*PWSLGF Trigger: GAAACCCAGTGACCAGGGCCATTTCTGACTATACCC...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGAGGCCTAGGAAATCCTaGACCTTGGCCATCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KILFMVDFSNHLVNQTLLRPRKS*TLAISP Trigger: AGGGGAGATGGCCAAGGTCCAGGATTTCCTAGGCCT...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGCTTGCCCAAACATCTTaGGGCGCTGCTGTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KILFMVDFSNHLVNQTLLLAQTS*GAAVFW Trigger: CCAGAAGACAGCAGCGCCCCAAGATGTTTGGGCAAG...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| 3UTR CAA 72 bp | ATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATaGTTGATTCCTCCCCAGGGATGCCATGAGATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: MVDFSNHLVNQT*LIPPQGCHEIY Trigger: ATAGATCTCATGGCATCCCTGGGGAGGAATCAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR GCA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGTTCTCCATGGTTATCTaGCCATCCAATGTCTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KILFMVDFSNHLVNQTLLFSMVI*PSNVLG Trigger: GCCTAAGACATTGGATGGGCAGATAACCATGGAGAA...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CCA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGAATTTCCGAAGTCTATaGATGACATCTGGGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FNSPHSYTFPILLQFLALNFRSL*MTSGSI Trigger: AATTGACCCAGATGTCATCCATAGACTTCGGAAATT...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS GCA 90 bp | TTGGCCGCCCTCCGGCCTTCCAGCTCCTCGGCTGCGCCTGGCTCCTaGGCCCCGCGCCCCAACAGCGCGTCCTGCTCTGTGACCGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAALRPSSSSAAPGS*APRPNSASCSVTAS Trigger: AGACGCGGTCACAGAGCAGGACGCGCTGTTGGGGCGCGGGGCGCAGGAGCCAGGCGCAGCCGAGGAGCTGGAAGGCCGGAGGGCGGCCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCCACATGAAGAGCAGCTaGCGCGCCGGCGGCCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIHMKSS*RAGGPL Trigger: TAAGGGGCCGCCGGCGCGCAAGCTGCTCTTCATGTG...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTTGCCAACCTCAGGGCTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGATGAGTTTGATATCCTaGGCCATAGAGTGGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: IFANLRAQNTDAISLFWEMSLIS*AIEWMR Trigger: GCGCATCCACTCTATGGCCAAGGATATCAAACTCAT...CTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAGCCCTGAGGTTGGCAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGGAGTCTTGGTGCTCTCAGTCACAAATAGCATTCTGGAGAGATGCCAGGGATCTCTGGCTTTTTaGACAGTGTCTGGGTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLGVLVLSVTNSILERCQGSLAF*TVSGYS Trigger: ACTATACCCAGACACTGTCAAAAAAGCCAGAGATCC...CTGGCATCTCTCCAGAATGCTATTTGTGACTGAGAGCACCAAGACTCCCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS CCA 90 bp | CATGTTGAAGGGTTTGTAGAATTTCCGAAGTCTATGGATGACATCTaGGTCAATTCGGGGATGAGTCCGACCTTTGCTCTTGCCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: HVEGFVEFPKSMDDI*VNSGMSPTFALAQT Trigger: TGTTTGGGCAAGAGCAAAGGTCGGACTCATCCCCGAATTGACCCAGATGTCATCCATAGACTTCGGAAATTCTACAAACCCTTCAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGGAGATCATAGAGTGGATGCGCTaGGGAGCCTCATTCGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPHSYTFPILLQFLALEIIEWMR*GASFVT Trigger: TGTGACGAATGAGGCTCCCAAGCGCATCCACTCTAT...GATCTCCAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | TTCAACTCTCCCCACTCATACACATTTCCAATTTTACTACAATTCCTGGCTTTGCCCAGGGTCCGGTTTTaGAAGGCCAGAACCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FNSPHSYTFPILLQFLALPRVRF*KARTSK Trigger: CTTTGAGGTTCTGGCCTTCAAAAACCGGACCCTGGG...CAAAGCCAGGAATTGTAGTAAAATTGGAAATGTGTATGAGTGGGGAGAGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGAGGAAATCCTGGACCTaGGCCATCTCCCCTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KILFMVDFSNHLVNQTLLRKSWT*AISPAG Trigger: CCCTGCAGGGGAGATGGCCAAGGTCCAGGATTTCCT...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGCGTGTCCCTCCTTTCTaGACCCCGATGATCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KILFMVDFSNHLVNQTLLRVPPF*TPMISA Trigger: GGCACTGATCATCGGGGTCAAGAAAGGAGGGACACG...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGGTCCGACCTTTGCTCTaGCCCAAACATCTTGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KILFMVDFSNHLVNQTLLVRPLL*PKHLGA Trigger: CGCCCCAAGATGTTTGGGCAAGAGCAAAGGTCGGAC...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACACAGATGCTATCTCCCTGTTCTGGGAGCATTCATGTAGGCCAGATCTTCCCACTGGAAATCTaGACCAGTCATTTGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKTQMLSPCSGSIHVGQIFPLEI*TSHLVK Trigger: TTTTACCAAATGACTGGTCAAGATTTCCAGTGGGAA...GATCTGGCCTACATGAATGCTCCCAGAACAGGGAGATAGCATCTGTGTTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS-3UTR CAA 90 bp | AAGATACTATTCATGGTAGATTTTAGTAACCATCTGGTCAACCAGACATTGTTGACCACCACAATGAGTTaGATATCCTTGGCCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KILFMVDFSNHLVNQTLLTTTMS*ISLAIE Trigger: CTCTATGGCCAAGGATATCAAACTCATTGTGGTGGT...CAACAATGTCTGGTTGACCAGATGGTTACTAAAATCTACCATGAATAGTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS GCA 72 bp | CTCGGCGGGGGCTCCGCGGCGGATCCCGGGGGCTCCTaGAGCGCCAGCGGGAACTGCAGCGAACCCGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGGGSAADPGGS*SASGNCSEPEP Trigger: CGGCTCGGGTTCGCTGCAGTTCCCGCTGGCGCTGCAGGAGCCCCCGGGATCCGCCGCGGAGCCCCCGCCGAG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS CAA 72 bp | GTGACGGACAGGGACAGGGTGCACATGAAGAGCAGCTaGCGCGCCGGCGGCCCCTTAGTGGAGGCGCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VTDRDRVHMKSS*RAGGPLVEAPG Trigger: GCCCGGCGCCTCCACTAAGGGGCCGCCGGCGCGCAAGCTGCTCTTCATGTGCACCCTGTCCCTGTCCGTCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS CCA 72 bp | TTCTCAGTCACCACACGCTTGAGGCCTAGGAAATCCTaGACCTTGGCCATCTCCCCTGCAGGGTCCACTATG | + |
|
Preference number: 6 (lower is better) Translates to: FSVTTRLRPRKS*TLAISPAGSTM Trigger: CATAGTGGACCCTGCAGGGGAGATGGCCAAGGTCCAGGATTTCCTAGGCCTCAAGCGTGTGGTGACTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS TCA 72 bp | CGAAGTCTATGGATGACATCTGGGTCAATTCGGGGATaGGTCCGACCTTTGCTCTTGCCCAAACATCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLWMTSGSIRG*VRPLLLPKHLG Trigger: CCCAAGATGTTTGGGCAAGAGCAAAGGTCGGACTCATCCCCGAATTGACCCAGATGTCATCCATAGACTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS CCA 72 bp | GGGTTTGTAGAATTTCCGAAGTCTATGGATGACATCTaGGTCAATTCGGGGATGAGTCCGACCTTTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFVEFPKSMDDI*VNSGMSPTFAL Trigger: AAGAGCAAAGGTCGGACTCATCCCCGAATTGACCCAGATGTCATCCATAGACTTCGGAAATTCTACAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||
| CDS CAA 90 bp | CTTATCACCCTCTTCCTGTTCCCACTGGAAATCTTGACCAGTCATTaGGTAAAACATCATGTTGAAGGGTTTGTAGAATTTCCGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LITLFLFPLEILTSH*VKHHVEGFVEFPKS Trigger: AGACTTCGGAAATTCTACAAACCCTTCAACATGATGTTTTACCAAATGACTGGTCAAGATTTCCAGTGGGAACAGGAAGAGGGTGATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106437.2 |
||