Pregenerated sensors for HS3ST3B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070407Ensembl transcript IDs: ENSMUST00000094103.4
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCTTTTGGCTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTaGTTGCCAGATCTCTCTACTGAGGCCATGAGCTTCCTGCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: EAFGWHAGHPLPLLG*LPDLSTEAMSFLPN Trigger: GTTGGGCAGGAAGCTCATGGCCTCAGTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR GCA 90 bp | AACAGCCTTCTGCACAGAAAAGCACAGGCGGGTGAGCACCTTGCGTaGAGGCGTCTCCACACACCTGCCAGCCAGGGGATTCTGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: NSLLHRKAQAGEHLA*RRLHTPASQGILLT Trigger: TGTCAGCAGAATCCCCTGGCTGGCAGGTGTGTGGAGACGCCTGCACGCAAGGTGCTCACCCGCCTGTGCTTTTCTGTGCAGAAGGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | TGTTCTGATGTCAAACAGCCTTCTGCACAGAAAAGCACAGGCGGGTaGGCACCTTGCGTGCAGGCGTCTCCACACACCTGCCAGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: CSDVKQPSAQKSTGG*APCVQASPHTCQPG Trigger: CCCTGGCTGGCAGGTGTGTGGAGACGCCTGCACGCAAGGTGCTCACCCGCCTGTGCTTTTCTGTGCAGAAGGCTGTTTGACATCAGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | CACATCAGACTCCGGGAGCAGCCAGCAAGCCTTGGTGAAGGCCTTTaGCAACTGCCTCTGGCTGGGAGCAAGGTTCTGCTGTACGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: HIRLREQPASLGEGL*QLPLAGSKVLLYVR Trigger: CCTCACGTACAGCAGAACCTTGCTCCCAGCCAGAGGCAGTTGTCAAAGGCCTTCACCAAGGCTTGCTGGCTGCTCCCGGAGTCTGATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | CTTCATGTGTCACATCAGACTCCGGGAGCAGCCAGCAAGCCTTGGTaGAGGCCTTTGACAACTGCCTCTGGCTGGGAGCAAGGTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LHVSHQTPGAASKPW*RPLTTASGWEQGSA Trigger: AGCAGAACCTTGCTCCCAGCCAGAGGCAGTTGTCAAAGGCCTTCACCAAGGCTTGCTGGCTGCTCCCGGAGTCTGATGTGACACATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | CTCTTCCTCTGCTGGGCTGCTTGCCAGATCTCTCTACTGAGGCCATaGGCTTCCTGCCCAACACTAGGTGGGTCTACACAGAGCAACACT | + |
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Preference number: 1 (lower is better) Translates to: LFLCWAACQISLLRP*ASCPTLGGSTQSNT Trigger: AGTGTTGCTCTGTGTAGACCCACCTAGTGTTGGGCAGGAAGCTCATGGCCTCAGTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR GCA 90 bp | ACCCAAGCCTCTGACACATGGGACCTGGGAAAGGGATCAAGTGTTTaGATACACTTCCAGCTGAATAATGGACGGAGGGTAGAGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TQASDTWDLGKGSSV*IHFQLNNGRRVEEE Trigger: CTCCTCCTCTACCCTCCGTCCATTATTCAGCTGGAAGTGTATGCAAACACTTGATCCCTTTCCCAGGTCCCATGTGTCAGAGGCTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR CCA 90 bp | CTTCAAAGCCTGCTGTGGACACTGCCTAGACCATTTCATAATCTCTaGGATGGGCTAGAAACTCAGAGGCTTTTGGCTGGCATGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: LQSLLWTLPRPFHNL*DGLETQRLLAGMLG Trigger: GCCCAGCATGCCAGCCAAAAGCCTCTGAGTTTCTAGCCCATCCCAGAGATTATGAAATGGTCTAGGCAGTGTCCACAGCAGGCTTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR GCA 90 bp | CCTCCCTTCCCCCACTTGGCTATGTACCATTCTCTGAACTCTTTTTaGTCTTCTACTTCATGTGTCACATCAGACTCCGGGAGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PPFPHLAMYHSLNSF*SSTSCVTSDSGSSQ Trigger: CTGGCTGCTCCCGGAGTCTGATGTGACACATGAAGTAGAAGAGCAAAAAGAGTTCAGAGAATGGTACATAGCCAAGTGGGGGAAGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | GCAGCCAAGACCCAAGGAGATAGCAGGTGGAAGACCCAAGGTGACTaGAGGCTGAATACCCGTAACAAAAATTCTCAAGTTGTGCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: AAKTQGDSRWKTQGD*RLNTRNKNSQVVLF Trigger: GAAAAGCACAACTTGAGAATTTTTGTTACGGGTATTCAGCCTTCAGTCACCTTGGGTCTTCCACCTGCTATCTCCTTGGGTCTTGGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | TATGGAATCCTGGGAGACTCTTTGGTGTGTCATAGCATGACTGTCTaGCTGAAGAAAGGAGTGTGGCACCCTCTTATGCAAAGGAGATGT | + |
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Preference number: 1 (lower is better) Translates to: YGILGDSLVCHSMTV*LKKGVWHPLMQRRC Trigger: ACATCTCCTTTGCATAAGAGGGTGCCACACTCCTTTCTTCAGTCAGACAGTCATGCTATGACACACCAAAGAGTCTCCCAGGATTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR CCA 90 bp | ATCTTGGGCAGATGCAGCATCCAATCATCCAGGGACTACAAGCAGTaGAGCCTGACCAAAGAGGTGCACATGTTGTTTGATTTATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: ILGRCSIQSSRDYKQ*SLTKEVHMLFDLFD Trigger: GTCAAATAAATCAAACAACATGTGCACCTCTTTGGTCAGGCTCCACTGCTTGTAGTCCCTGGATGATTGGATGCTGCATCTGCCCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | GCAGATGCAGCATCCAATCATCCAGGGACTACAAGCAGTGGAGCCTaGCCAAAGAGGTGCACATGTTGTTTGATTTATTTGACTAACACT | + |
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Preference number: 1 (lower is better) Translates to: ADAASNHPGTTSSGA*PKRCTCCLIYLTNT Trigger: AGTGTTAGTCAAATAAATCAAACAACATGTGCACCTCTTTGGTCAGGCTCCACTGCTTGTAGTCCCTGGATGATTGGATGCTGCATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | AGACCCAAGGAGATAGCAGGTGGAAGACCCAAGGTGACTGAAGGCTaGATACCCGTAACAAAAATTCTCAAGTTGTGCTTTTCTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RPKEIAGGRPKVTEG*IPVTKILKLCFSSS Trigger: AGAAGAAGAAAAGCACAACTTGAGAATTTTTGTTACGGGTATTCAGCCTTCAGTCACCTTGGGTCTTCCACCTGCTATCTCCTTGGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR GCA 90 bp | AGTTACCTTTGTAGGTGCTACAGAGTAAACGAGCACAGACCTACATaGAAACATCCCCAGAGAGAAGGCTTTCCATGGATAGGAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: SYLCRCYRVNEHRPT*KHPQREGFPWIGIQ Trigger: TTGAATTCCTATCCATGGAAAGCCTTCTCTCTGGGGATGTTTGCATGTAGGTCTGTGCTCGTTTACTCTGTAGCACCTACAAAGGTAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 90 bp | CAAGGATTTGACCCAGAACAGACTCCTAACTCACTTCAGTGTTCATaGCTAAATGACTTCCTTCTACCTCAGTATGTCTTGTTTTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: QGFDPEQTPNSLQCS*LNDFLLPQYVLFLL Trigger: TAACAAAAACAAGACATACTGAGGTAGAAGGAAGTCATTTAGTCATGAACACTGAAGTGAGTTAGGAGTCTGTTCTGGGTCAAATCCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR CAA 90 bp | TGTCAAACAGCCTTCTGCACAGAAAAGCACAGGCGGGTGAGCACCTaGCGTGCAGGCGTCTCCACACACCTGCCAGCCAGGGGATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: CQTAFCTEKHRRVST*RAGVSTHLPARGFC Trigger: GCAGAATCCCCTGGCTGGCAGGTGTGTGGAGACGCCTGCACGCAAGGTGCTCACCCGCCTGTGCTTTTCTGTGCAGAAGGCTGTTTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR CAA 90 bp | GCTTTTGGCTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTGCTaGCCAGATCTCTCTACTGAGGCCATGAGCTTCCTGCCCAACACT | + |
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Preference number: 2 (lower is better) Translates to: AFGWHAGHPLPLLGC*PDLSTEAMSFLPNT Trigger: AGTGTTGGGCAGGAAGCTCATGGCCTCAGTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | AAACTCAGAGGCTTTTGGCTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTGACTGAGGCAGCTCAGTaGTTCCGGGAGGGTATCCAG | + |
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Preference number: 2 (lower is better) Translates to: KLRGFWLACWAPSSSAGLTEAAQ*FREGIQ Trigger: CTGGATACCCTCCCGGAAGCACTGAGCTGCCTCAGT...CAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCCTCTGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGATTCGAGTACCGCACGCAGCCAGCTTTCCCAGCCTGGGCCCAATAGGCACCCTCTTCCTCTGCTaGGCTGCTTGCCAGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: SQIRVPHAASFPSLGPIGTLFLC*AACQIS Trigger: AGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGT...GCCTATTGGGCCCAGGCTGGGAAAGCTGGCTGCGTGCGGTACTCGAATCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGATTCGAGTACCGCACGCAGCCAGCTTTCCCAGCCTGGGCCCAATAGGCAAGACCCAAGGTGACTaGAGGCTGAATACCCGTAAC | + |
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Preference number: 2 (lower is better) Translates to: SQIRVPHAASFPSLGPIGKTQGD*RLNTRN Trigger: GTTACGGGTATTCAGCCTTCAGTCACCTTGGGTCTT...GCCTATTGGGCCCAGGCTGGGAAAGCTGGCTGCGTGCGGTACTCGAATCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR CAA 90 bp | TCTACTTCATGTGTCACATCAGACTCCGGGAGCAGCCAGCAAGCCTaGGTGAAGGCCTTTGACAACTGCCTCTGGCTGGGAGCAAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: STSCVTSDSGSSQQA*VKAFDNCLWLGARF Trigger: GAACCTTGCTCCCAGCCAGAGGCAGTTGTCAAAGGCCTTCACCAAGGCTTGCTGGCTGCTCCCGGAGTCTGATGTGACACATGAAGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR CAA 90 bp | AGACCATTTCATAATCTCTGGGATGGGCTAGAAACTCAGAGGCTTTaGGCTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: RPFHNLWDGLETQRL*AGMLGTLFLCWAAC Trigger: GCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCCTCTGAGTTTCTAGCCCATCCCAGAGATTATGAAATGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | GACTATCACATGATGATGGAGCGGCATCTTGGGCAGATGCAGCATCCAATCATCGGCACCCTCTTCCTCTaGTGGGCTGCTTGCCAGATC | + |
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Preference number: 2 (lower is better) Translates to: DYHMMMERHLGQMQHPIIGTLFL*WAACQI Trigger: GATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCC...GATGATTGGATGCTGCATCTGCCCAAGATGCCGCTCCATCATCATGTGATAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | GACTATCACATGATGATGGAGCGGCATCTTGGGCAGATGCAGCATCCAATCATCGGCTTTTGGCTGGCATaGTGGGCACCCTCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: DYHMMMERHLGQMQHPIIGFWLA*WAPSSS Trigger: AGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCC...GATGATTGGATGCTGCATCTGCCCAAGATGCCGCTCCATCATCATGTGATAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCACAGGGAGTACCATCTACATATTAGCAGCAAAGCTGGGGACTTCTCTGCTGTCAAGAGATCCATCTaGCCCCTGTGGGCCTCAACA | + |
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Preference number: 2 (lower is better) Translates to: RHREYHLHISSKAGDFSAVKRSI*PLWAST Trigger: TGTTGAGGCCCACAGGGGTCAGATGGATCTCTTGAC...AGCAGAGAAGTCCCCAGCTTTGCTGCTAATATGTAGATGGTACTCCCTGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTACGTGAGGGGAGTGAGCCTTGTTCTGATGTCAAACAGCCTTCTGCACAGACAAGCCTCTGACACATaGGACCTGGGAAAGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: LYVRGVSLVLMSNSLLHRQASDT*DLGKGS Trigger: TGATCCCTTTCCCAGGTCCCATGTGTCAGAGGCTTG...TCTGTGCAGAAGGCTGTTTGACATCAGAACAAGGCTCACTCCCCTCACGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTACGTGAGGGGAGTGAGCCTTGTTCTGATGTCAAACAGCCTTCTGCACAGACTAGGCTTGTGCTGCTaGCTATGTATGGAATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LYVRGVSLVLMSNSLLHRLGLCC*LCMESW Trigger: CCAGGATTCCATACATAGGCAGCAGCACAAGCCTAG...TCTGTGCAGAAGGCTGTTTGACATCAGAACAAGGCTCACTCCCCTCACGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | GGTCATAAGGACATCCCTGTAAGGGAGGCGGGAGAAATGCACCTAGGTGCTATGAAGCACCATCGATTGTaGGGGACAGAACAAAACATC | + |
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Preference number: 2 (lower is better) Translates to: GHKDIPVREAGEMHLGAMKHHRL*GTEQNI Trigger: GATGTTTTGTTCTGTCCCTCACAATCGATGGTGCTT...CATAGCACCTAGGTGCATTTCTCCCGCCTCCCTTACAGGGATGTCCTTATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAATGAGCAAATGACTGTGAAATGGGCTGGGGAATGTGGCTCAGTGTTTCAGCACCCAAGCCTCTaGCACATGGGACCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: EENEQMTVKWAGECGSVFQHPSL*HMGPGK Trigger: TTTCCCAGGTCCCATGTGTCAGAGGCTTGGGTGCTG...AAACACTGAGCCACATTCCCCAGCCCATTTCACAGTCATTTGCTCATTTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | CTGTACGTGAGGGGAGTGAGCCTTGTTCTGATGTCAAACAGCCTTCTGCACAGACATAGCATGACTGTCTaGCTGAAGAAAGGAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LYVRGVSLVLMSNSLLHRHSMTV*LKKGVW Trigger: CCACACTCCTTTCTTCAGTCAGACAGTCATGCTATG...TCTGTGCAGAAGGCTGTTTGACATCAGAACAAGGCTCACTCCCCTCACGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTACGTGAGGGGAGTGAGCCTTGTTCTGATGTCAAACAGCCTTCTGCACAGACAAATGACTGTGAAATaGGCTGGGGAATGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LYVRGVSLVLMSNSLLHRQMTVK*AGECGS Trigger: TGAGCCACATTCCCCAGCCCATTTCACAGTCATTTG...TCTGTGCAGAAGGCTGTTTGACATCAGAACAAGGCTCACTCCCCTCACGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | ACATCAACACCTCTGATTCTCACTGACTTGTTGGAGCCTCCATTTTCGGTTCTTGTGATTCGAACTCTCTaGAGATTGTGGCTAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TSTPLILTDLLEPPFSVLVIRTL*RLWLGS Trigger: GCTGCCTAGCCACAATCTGCAGAGAGTTCGAATCAC...AAGAACCGAAAATGGAGGCTCCAACAAGTCAGTGAGAATCAGAGGTGTTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTCTTCCTCTGCTGGGCTaGTTGCCAGATCTCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: QCRLYSIVTLPEVTFVGALPLLG*LPDLST Trigger: AGTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAG...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTAGGGACTACAAGCAGTaGAGCCTGACCAAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: QCRLYSIVTLPEVTFVGARDYKQ*SLTKEV Trigger: CACCTCTTTGGTCAGGCTCCACTGCTTGTAGTCCCT...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCACAGGGAGTACCATCTACATATTAGCAGCAAAGCTGGGGACTTCTCTGCTAAGGTGACTGAAGGCTaGATACCCGTAACAAAAATT | + |
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Preference number: 2 (lower is better) Translates to: RHREYHLHISSKAGDFSAKVTEG*IPVTKI Trigger: AATTTTTGTTACGGGTATTCAGCCTTCAGTCACCTT...AGCAGAGAAGTCCCCAGCTTTGCTGCTAATATGTAGATGGTACTCCCTGTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTGACTGTGAAATGGGCTaGGGAATGTGGCTCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: QCRLYSIVTLPEVTFVGADCEMG*GMWLSV Trigger: AACACTGAGCCACATTCCCCAGCCCATTTCACAGTC...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR TCA 90 bp | GACTATCACATGATGATGGAGCGGCATCTTGGGCAGATGCAGCATCCAATCATCCTATGTACCATTCTCTaGACTCTTTTTGCTCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: DYHMMMERHLGQMQHPIILCTIL*TLFALL Trigger: TAGAAGAGCAAAAAGAGTTCAGAGAATGGTACATAG...GATGATTGGATGCTGCATCTGCCCAAGATGCCGCTCCATCATCATGTGATAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAAATGAGCAAATGACTGTGAAATGGGCTGGGGAATGTGGCTCAGTGTTTCTATGTATGGAATCCTaGGAGACTCTTTGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: EENEQMTVKWAGECGSVFLCMES*ETLWCV Trigger: GACACACCAAAGAGTCTCCCAGGATTCCATACATAG...AAACACTGAGCCACATTCCCCAGCCCATTTCACAGTCATTTGCTCATTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTGCTGCTGCCTATGTATaGAATCCTGGGAGACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QCRLYSIVTLPEVTFVGAAAAYV*NPGRLF Trigger: AAAGAGTCTCCCAGGATTCCATACATAGGCAGCAGC...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR GCA 90 bp | ACATCAACACCTCTGATTCTCACTGACTTGTTGGAGCCTCCATTTTCGGTTCTTTGTGGCACCCTCTTATaGAAAGGAGATGTCACATTT | + |
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Preference number: 2 (lower is better) Translates to: TSTPLILTDLLEPPFSVLCGTLL*KGDVTF Trigger: AAATGTGACATCTCCTTTGCATAAGAGGGTGCCACA...AAGAACCGAAAATGGAGGCTCCAACAAGTCAGTGAGAATCAGAGGTGTTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTACTCTCTGCAGATTGTaGCTAGGCAGCTTAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: QCRLYSIVTLPEVTFVGATLCRL*LGSLVN Trigger: ATTCACTAAGCTGCCTAGCCACAATCTGCAGAGAGT...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR-3UTR CCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTAAAAGGTGTCCAGCTTaGAAAGAGAACAGGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QCRLYSIVTLPEVTFVGAKRCPA*KENRKA Trigger: AGCCTTCCTGTTCTCTTTCCAAGCTGGACACCTTTT...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR GCA 72 bp | CTGCACAGAAAAGCACAGGCGGGTGAGCACCTTGCGTaGAGGCGTCTCCACACACCTGCCAGCCAGGGGATT | + |
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Preference number: 3 (lower is better) Translates to: LHRKAQAGEHLA*RRLHTPASQGI Trigger: AATCCCCTGGCTGGCAGGTGTGTGGAGACGCCTGCACGCAAGGTGCTCACCCGCCTGTGCTTTTCTGTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 72 bp | GGCGTCTCCACACACCTGCCAGCCAGGGGATTCTGCTaGCAGTGTGGGGTTGGCCTCAATGTACACCGTGCT | + |
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Preference number: 3 (lower is better) Translates to: GVSTHLPARGFC*QCGVGLNVHRA Trigger: AGCACGGTGTACATTGAGGCCAACCCCACACTGTCAGCAGAATCCCCTGGCTGGCAGGTGTGTGGAGACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR TCA 72 bp | CTCCGGGAGCAGCCAGCAAGCCTTGGTGAAGGCCTTTaGCAACTGCCTCTGGCTGGGAGCAAGGTTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LREQPASLGEGL*QLPLAGSKVLL Trigger: CAGCAGAACCTTGCTCCCAGCCAGAGGCAGTTGTCAAAGGCCTTCACCAAGGCTTGCTGGCTGCTCCCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
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| 3UTR GCA 72 bp | GGCTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTaGTTGCCAGATCTCTCTACTGAGGCCATGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GWHAGHPLPLLG*LPDLSTEAMSF Trigger: GAAGCTCATGGCCTCAGTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | GTCAAACAGCCTTCTGCACAGAAAAGCACAGGCGGGTaGGCACCTTGCGTGCAGGCGTCTCCACACACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VKQPSAQKSTGG*APCVQASPHTC Trigger: GCAGGTGTGTGGAGACGCCTGCACGCAAGGTGCTCACCCGCCTGTGCTTTTCTGTGCAGAAGGCTGTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR GCA 72 bp | AGGCTTTTGGCTGGCATGCTGGGCACCCTCTTCCTCTaGTGGGCTGCTTGCCAGATCTCTCTACTGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLLAGMLGTLFL*WAACQISLLRP Trigger: TGGCCTCAGTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CCA 72 bp | TCTCTGGGATGGGCTAGAAACTCAGAGGCTTTTGGCTaGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLGWARNSEAFG*HAGHPLPLLGC Trigger: GCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCCTCTGAGTTTCTAGCCCATCCCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | TCACATCAGACTCCGGGAGCAGCCAGCAAGCCTTGGTaGAGGCCTTTGACAACTGCCTCTGGCTGGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHQTPGAASKPW*RPLTTASGWEQ Trigger: TTGCTCCCAGCCAGAGGCAGTTGTCAAAGGCCTTCACCAAGGCTTGCTGGCTGCTCCCGGAGTCTGATGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | TGCTGGGCTGCTTGCCAGATCTCTCTACTGAGGCCATaGGCTTCCTGCCCAACACTAGGTGGGTCTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: CWAACQISLLRP*ASCPTLGGSTQ Trigger: CTGTGTAGACCCACCTAGTGTTGGGCAGGAAGCTCATGGCCTCAGTAGAGAGATCTGGCAAGCAGCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR GCA 72 bp | ATGGGCTGGGGAATGTGGCTCAGTGTTTGCCTAGTGTaGAATAGGCCCAGGATTCTACCCCCAGCTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MGWGMWLSVCLV*NRPRILPPALQ Trigger: CTGCAGAGCTGGGGGTAGAATCCTGGGCCTATTGCACACTAGGCAAACACTGAGCCACATTCCCCAGCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | TGGTGTCTGTCTCCTAGCAGCCTAGCAGCTCAGAAGTaGCACTCAGTGGGCTTGCAGATGGCCAGTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WCLSPSSLAAQK*HSVGLQMASEG Trigger: TCCTTCACTGGCCATCTGCAAGCCCACTGAGTGTCACTTCTGAGCTGCTAGGCTGCTAGGAGACAGACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR GCA 72 bp | CCCCTGTGGGCCTCAACATCCAGCATCCTAGGCTTGTaGTGCTGCCTATGTATGGAATCCTGGGAGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLWASTSSILGL*CCLCMESWETL Trigger: AAGAGTCTCCCAGGATTCCATACATAGGCAGCAGCACAAGCCTAGGATGCTGGATGTTGAGGCCCACAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CCA 72 bp | CCTGGGCCCAATAGGCCCATCCTTCAAAGCCTGCTGTaGACACTGCCTAGACCATTTCATAATCTCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGPNRPILQSLL*TLPRPFHNLWD Trigger: ATCCCAGAGATTATGAAATGGTCTAGGCAGTGTCCACAGCAGGCTTTGAAGGATGGGCCTATTGGGCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCACAGGGAGTACCATCTACATATTAGCAGCAAAGCTGGGGACTTCTCTGCTTCCAGCATCCTAGGCTaGTGCTGCTGCCTATGTATG | + |
|
Preference number: 3 (lower is better) Translates to: RHREYHLHISSKAGDFSASSILG*CCCLCM Trigger: CATACATAGGCAGCAGCACAAGCCTAGGATGCTGGA...AGCAGAGAAGTCCCCAGCTTTGCTGCTAATATGTAGATGGTACTCCCTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CCA 72 bp | CAAACATGTAGCAGGACAAACTGCCAGGACATGAACTaGTGTCTGTCTCCTAGCAGCCTAGCAGCTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QTCSRTNCQDMN*CLSPSSLAAQK Trigger: CTTCTGAGCTGCTAGGCTGCTAGGAGACAGACACCAGTTCATGTCCTGGCAGTTTGTCCTGCTACATGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR-3UTR CAA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTGCTGACAGTGTGGGGTaGGCCTCAATGTACACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: QCRLYSIVTLPEVTFVGAADSVG*ASMYTV Trigger: CACGGTGTACATTGAGGCCAACCCCACACTGTCAGC...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | AGGTGGGTCTACACAGAGCAACACTTCTATAAATGCTaGATGTCAAGAGATCCATCTGACCCCTGTGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RWVYTEQHFYKC*MSRDPSDPCGP Trigger: AGGCCCACAGGGGTCAGATGGATCTCTTGACATTCAGCATTTATAGAAGTGTTGCTCTGTGTAGACCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | CTGACAGTGTGGGGTTGGCCTCAATGTACACCGTGCTaGGTATGGACAGAAGAAAATGAGCAAATGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTVWGWPQCTPC*VWTEENEQMTV Trigger: CACAGTCATTTGCTCATTTTCTTCTGTCCATACTCAGCACGGTGTACATTGAGGCCAACCCCACACTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR GCA 72 bp | TCTGACACATGGGACCTGGGAAAGGGATCAAGTGTTTaGATACACTTCCAGCTGAATAATGGACGGAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SDTWDLGKGSSV*IHFQLNNGRRV Trigger: TACCCTCCGTCCATTATTCAGCTGGAAGTGTATGCAAACACTTGATCCCTTTCCCAGGTCCCATGTGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CCA 72 bp | AGATGCAGCATCCAATCATCCAGGGACTACAAGCAGTaGAGCCTGACCAAAGAGGTGCACATGTTGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: RCSIQSSRDYKQ*SLTKEVHMLFD Trigger: ATCAAACAACATGTGCACCTCTTTGGTCAGGCTCCACTGCTTGTAGTCCCTGGATGATTGGATGCTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR-3UTR CAA 90 bp | CATGGAAGCACCATCGATTGTGAGGGACAGAACAAAACATCGGAGTTAAACACTCGAACTCTCTGCAGATaGTGGCTAGGCAGCTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HGSTIDCEGQNKTSELNTRTLCR*WLGSLV Trigger: CACTAAGCTGCCTAGCCACAATCTGCAGAGAGTTCG...AGTGTTTAACTCCGATGTTTTGTTCTGTCCCTCACAATCGATGGTGCTTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR GCA 72 bp | ATGCACCTAGGTGCTATGTCACTGAGGGTAATGAACTaGTTAAGTGAATTCCACCTTCCGACTACAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: MHLGAMSLRVMN*LSEFHLPTTAH Trigger: GTGTGCTGTAGTCGGAAGGTGGAATTCACTTAAGCAGTTCATTACCCTCAGTGACATAGCACCTAGGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR-3UTR CAA 90 bp | ACATCAACACCTCTGATTCTCACTGACTTGTTGGAGCCTCCATTTTCGGTTCTTAAAAAGGTGTCCAGCTaGGAAAGAGAACAGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSTPLILTDLLEPPFSVLKKVSS*EREQEG Trigger: GCCTTCCTGTTCTCTTTCCAAGCTGGACACCTTTTT...AAGAACCGAAAATGGAGGCTCCAACAAGTCAGTGAGAATCAGAGGTGTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | ACCCAAGGAGATAGCAGGTGGAAGACCCAAGGTGACTaGAGGCTGAATACCCGTAACAAAAATTCTCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TQGDSRWKTQGD*RLNTRNKNSQV Trigger: AACTTGAGAATTTTTGTTACGGGTATTCAGCCTTCAGTCACCTTGGGTCTTCCACCTGCTATCTCCTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | GACCCAGAACAGACTCCTAACTCACTTCAGTGTTCATaGCTAAATGACTTCCTTCTACCTCAGTATGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DPEQTPNSLQCS*LNDFLLPQYVL Trigger: CAAGACATACTGAGGTAGAAGGAAGTCATTTAGTCATGAACACTGAAGTGAGTTAGGAGTCTGTTCTGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR TCA 72 bp | CACTCAATGCAGACTTTATTCCATAGTCACTCTGCCTaGAGTTACCTTTGTAGGTGCTACAGAGTAAACGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSMQTLFHSHSA*SYLCRCYRVNE Trigger: CTCGTTTACTCTGTAGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR GCA 90 bp | CGCAGCCAGCTTTCCCAGCCTGGGCCCAATAGGCCCATCCTTCAAAGCCTGCTGGGCGCCTCTGGACTCTaGTCCTCCTGGCTCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSQLSQPGPNRPILQSLLGASGL*SSWLPA Trigger: CGCTGGGAGCCAGGAGGAGCAGAGTCCAGAGGCGCC...CAGCAGGCTTTGAAGGATGGGCCTATTGGGCCCAGGCTGGGAAAGCTGGCTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR TCA 90 bp | CTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTGCTTGCCAGATCTCTCTACTGCTCCCAGCGCCGCTaGAGAAGCTGGAGATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LACWAPSSSAGLLARSLYCSQRR*RSWRWD Trigger: GTCCCATCTCCAGCTTCTTCAGCGGCGCTGGGAGCA...GTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR CCA 90 bp | GGTCATAAGGACATCCCTGTAAGGGAGGCGGGAGAAATGCACCTAGGTGCTATGGGAGTCCGGCGCCTCTaGACTCTGCTCCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHKDIPVREAGEMHLGAMGVRRL*TLLLLA Trigger: AGCCAGGAGGAGCAGAGTCCAGAGGCGCCGGACTCC...CATAGCACCTAGGTGCATTTCTCCCGCCTCCCTTACAGGGATGTCCTTATGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR GCA 90 bp | AGGCACAGGGAGTACCATCTACATATTAGCAGCAAAGCTGGGGACTTCTCTGCTATGGCCTGCGGCAGCTaGTTGCTCCCAGCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHREYHLHISSKAGDFSAMACGS*LLPAPL Trigger: CAGCGGCGCTGGGAGCAAGCAGCTGCCGCAGGCCAT...AGCAGAGAAGTCCCCAGCTTTGCTGCTAATATGTAGATGGTACTCCCTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR GCA 90 bp | AGGCACAGGGAGTACCATCTACATATTAGCAGCAAAGCTGGGGACTTCTCTGCTCGCGCGATGGTGGGGTaGGCGCGGCCCTTAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHREYHLHISSKAGDFSARAMVG*ARPLVL Trigger: CAAGACTAAGGGCCGCGCGCACCCCACCATCGCGCG...AGCAGAGAAGTCCCCAGCTTTGCTGCTAATATGTAGATGGTACTCCCTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CAA 72 bp | TGTGTCACATCAGACTCCGGGAGCAGCCAGCAAGCCTaGGTGAAGGCCTTTGACAACTGCCTCTGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVTSDSGSSQQA*VKAFDNCLWLG Trigger: TCCCAGCCAGAGGCAGTTGTCAAAGGCCTTCACCAAGGCTTGCTGGCTGCTCCCGGAGTCTGATGTGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAGTGACACTCAGTGGGCTTGCAGATGGCCAGTGAAGGAAGAGACAGACTCTCATTCGGAGCTGTaGCCAGGGCTGGCTGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LRSDTQWACRWPVKEETDSHSEL*PGLAER Trigger: ACGCTCAGCCAGCCCTGGTCACAGCTCCGAATGAGA...GTCTGTCTCTTCCTTCACTGGCCATCTGCAAGCCCACTGAGTGTCACTTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR CCA 90 bp | GACTATCACATGATGATGGAGCGGCATCTTGGGCAGATGCAGCATCCAATCATCAGCTGGAGATGGGACTaGGGGAGTCCGGCGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DYHMMMERHLGQMQHPIISWRWD*GSPAPL Trigger: CAGAGGCGCCGGACTCCCCCAGTCCCATCTCCAGCT...GATGATTGGATGCTGCATCTGCCCAAGATGCCGCTCCATCATCATGTGATAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCATGCTGGGCACCCTCTTCCTCTGCTGGGCTGCTTGCCAGATCTCTCTACACATGTACAGCCAGATaGAAAGCATGGCGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LACWAPSSSAGLLARSLYTCTAR*KAWRRA Trigger: TGCTCTTCGCCATGCTTTGCATCTGGCTGTACATGT...GTAGAGAGATCTGGCAAGCAGCCCAGCAGAGGAAGAGGGTGCCCAGCATGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CAA 72 bp | CATAATCTCTGGGATGGGCTAGAAACTCAGAGGCTTTaGGCTGGCATGCTGGGCACCCTCTTCCTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNLWDGLETQRL*AGMLGTLFLCW Trigger: CCAGCAGAGGAAGAGGGTGCCCAGCATGCCAGCCAAAAGCCTCTGAGTTTCTAGCCCATCCCAGAGATTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR GCA 90 bp | GACTATCACATGATGATGGAGCGGCATCTTGGGCAGATGCAGCATCCAATCATCCGAATTGGCCGGAGGTaGCCGGAAGGGCATCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DYHMMMERHLGQMQHPIIRIGRR*PEGHLR Trigger: CCTAAGATGCCCTTCCGGGCACCTCCGGCCAATTCG...GATGATTGGATGCTGCATCTGCCCAAGATGCCGCTCCATCATCATGTGATAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CAA 72 bp | GCGCCCACATCAACACCTCTGATTCTCACTGACTTGTaGGAGCCTCCATTTTCGGTTCTTAGGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: APTSTPLILTDL*EPPFSVLRRAA Trigger: GGCTGCTCTCCTAAGAACCGAAAATGGAGGCTCCAACAAGTCAGTGAGAATCAGAGGTGTTGATGTGGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CAA 72 bp | CCAGCGCCCACATCAACACCTCTGATTCTCACTGACTaGTTGGAGCCTCCATTTTCGGTTCTTAGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPTSTPLILTD*LEPPFSVLRRA Trigger: TGCTCTCCTAAGAACCGAAAATGGAGGCTCCAACAAGTCAGTGAGAATCAGAGGTGTTGATGTGGGCGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR GCA 90 bp | CAATGCAGACTTTATTCCATAGTCACTCTGCCTGAAGTTACCTTTGTAGGTGCTCTACTGTCTTATCCTTaGCTGCAGCCAGCGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCRLYSIVTLPEVTFVGALLSYP*LQPANW Trigger: CCAATTCGCTGGCTGCAGGCAAGGATAAGACAGTAG...AGCACCTACAAAGGTAACTTCAGGCAGAGTGACTATGGAATAAAGTCTGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CAA 72 bp | ACCACTAATTATCGACATCTGCTCAGATCCAAGGATTaGACCCAGAACAGACTCCTAACTCACTTCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTNYRHLLRSKD*TQNRLLTHFSV Trigger: AACACTGAAGTGAGTTAGGAGTCTGTTCTGGGTCAAATCCTTGGATCTGAGCAGATGTCGATAATTAGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| 3UTR CAA 72 bp | TATAGAAGACATACTGCGAGAATTTGCACAGCACTTTaGATTACTGGGCTGAATGAAACTCAAGTCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRRHTARICTAL*ITGLNETQVIN Trigger: ATTTATGACTTGAGTTTCATTCAGCCCAGTAATCAAAAGTGCTGTGCAAATTCTCGCAGTATGTCTTCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR CAA 90 bp | GGTCATAAGGACATCCCTGTAAGGGAGGCGGGAGAAATGCACCTAGGTGCTATGGCCTGCGGCAGCTGCTaGCTCCCAGCGCCGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHKDIPVREAGEMHLGAMACGSC*LPAPLK Trigger: CTTCAGCGGCGCTGGGAGCAAGCAGCTGCCGCAGGC...CATAGCACCTAGGTGCATTTCTCCCGCCTCCCTTACAGGGATGTCCTTATGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS GCA 90 bp | CGGTACAGGAGCCGGCGCACGAGTACAAAAACATGTACAGCCAGATaGAAAGCATGGCGAAGAGCAGCGCGAGCTTCCTCCTCACCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RYRSRRTSTKTCTAR*KAWRRAARASSSPA Trigger: CGCCGGTGAGGAGGAAGCTCGCGCTGCTCTTCGCCATGCTTTGCATCTGGCTGTACATGTTTTTGTACTCGTGCGCCGGCTCCTGTACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS-3UTR CAA 90 bp | CATGGAAGCACCATCGATTGTGAGGGACAGAACAAAACATCGGAGTTAAACACTCCTACTGTCTTATCCTaGCCTGCAGCCAGCGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: HGSTIDCEGQNKTSELNTPTVLS*PAASEL Trigger: CAATTCGCTGGCTGCAGGCAAGGATAAGACAGTAGG...AGTGTTTAACTCCGATGTTTTGTTCTGTCCCTCACAATCGATGGTGCTTCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS GCA 72 bp | AGCTTCCTCCTCACCGGCGGCGGGGGCGGCGGCGGCTaGGGCAGGAACCGGCCCGGGACATCGAGACAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFLLTGGGGGGG*GRNRPGTSRQD Trigger: GTCCTGTCTCGATGTCCCGGGCCGGTTCCTGCCGCAGCCGCCGCCGCCCCCGCCGCCGGTGAGGAGGAAGCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS GCA 72 bp | CTCCTGGCTCCCAGCGCCTACTGTCTTATCCTTGCCTaGAGCCAGCGAATTGGCCGGAGGTGCCCGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLAPSAYCLILA*SQRIGRRCPEG Trigger: CCCTTCCGGGCACCTCCGGCCAATTCGCTGGCTGCAGGCAAGGATAAGACAGTAGGCGCTGGGAGCCAGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS GCA 72 bp | GCTCCTCCTGGCTCCCAGCGCCTACTGTCTTATCCTTaGCTGCAGCCAGCGAATTGGCCGGAGGTGCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: APPGSQRLLSYP*LQPANWPEVPG Trigger: TCCGGGCACCTCCGGCCAATTCGCTGGCTGCAGGCAAGGATAAGACAGTAGGCGCTGGGAGCCAGGAGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS CAA 72 bp | TGCTCCTCCTGGCTCCCAGCGCCTACTGTCTTATCCTaGCCTGCAGCCAGCGAATTGGCCGGAGGTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSSWLPAPTVLS*PAASELAGGAR Trigger: CCGGGCACCTCCGGCCAATTCGCTGGCTGCAGGCAAGGATAAGACAGTAGGCGCTGGGAGCCAGGAGGAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||
| CDS GCA 72 bp | AGCCGGCGCACGAGTACAAAAACATGTACAGCCAGATaGAAAGCATGGCGAAGAGCAGCGCGAGCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRTSTKTCTAR*KAWRRAARASS Trigger: GGAGGAAGCTCGCGCTGCTCTTCGCCATGCTTTGCATCTGGCTGTACATGTTTTTGTACTCGTGCGCCGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094103.4 |
||