Pregenerated sensors for HS2ST1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040151Ensembl transcript IDs: ENSMUST00000043325.9, ENSMUST00000160690.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCGGTGGCGCTGCTGTTGTTCTCAGGATGTAAGGGCCATGGGCTaGCCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACAC | + |
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Preference number: 1 (lower is better) Translates to: LRWRCCCSQDVRAMG*PEDRELQVLTRPAH Trigger: GTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGGGCAGCCCATGGCCCTTACATCCTGAGAACAACAGCAGCGCCACCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR TCA 90 bp | GTGGCGCTGCTGTTGTTCTCAGGATGTAAGGGCCATGGGCTGCCCTaGAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCAT | + |
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Preference number: 1 (lower is better) Translates to: VALLLFSGCKGHGLP*RQRAPSANQACTPH Trigger: ATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGGGCAGCCCATGGCCCTTACATCCTGAGAACAACAGCAGCGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR TCA 90 bp | ATCCAATGCTCAGGAGGCCAGAAGCAGCGGATGTTAGGGACTGTGTaGCTATCAGGGGACACAGAAGCAGCTCCTATGCGGTGCTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: IQCSGGQKQRMLGTV*LSGDTEAAPMRCFK Trigger: CTTGAAGCACCGCATAGGAGCTGCTTCTGTGTCCCCTGATAGTCACACAGTCCCTAACATCCGCTGCTTCTGGCCTCCTGAGCATTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR GCA 90 bp | AGGCAAATCCTACCCACATCACAGCTCACTGATGGAGTCGCCATGTaGGGTCACCAATATGCCAGTGTTCAGGGGTACAGATACGCCATG | + |
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Preference number: 1 (lower is better) Translates to: RQILPTSQLTDGVAM*GHQYASVQGYRYAM Trigger: CATGGCGTATCTGTACCCCTGAACACTGGCATATTGGTGACCGCACATGGCGACTCCATCAGTGAGCTGTGATGTGGGTAGGATTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR GCA 90 bp | GCCATCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCCTTaGAATTGCCCTTTCACATCGGCAGCATCTCCCTTACTGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AIHCMALFNFSDFVP*NCPFTSAASPLLGW Trigger: CCAGCCCAGTAAGGGAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR GCA 90 bp | CGAGGGCCATCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTaGCTTGCAATTGCCCTTTCACATCGGCAGCATCTCCCTTACTGG | + |
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Preference number: 1 (lower is better) Translates to: RGPSIVWRCSISRTS*LAIALSHRQHLPYW Trigger: CCAGTAAGGGAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR TCA 90 bp | GAAATGTCCCGAATCTGTACAGGTGAGCTAGGAAAACGAGTCACCTaGCAGCAAGGTAAGACAGAAGGAAGCTGGGGAGGGACTGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: EMSRICTGELGKRVT*QQGKTEGSWGGTES Trigger: TGACTCAGTCCCTCCCCAGCTTCCTTCTGTCTTACCTTGCTGTCAGGTGACTCGTTTTCCTAGCTCACCTGTACAGATTCGGGACATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR GCA 90 bp | ACGTTCCACGAGGACACGCAGCCGTGGAGCCACATTCCCTCTTCCTaGAGTGTTGATTGTATAGCTTTTCTTCCAGGTATCAGACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TFHEDTQPWSHIPSS*SVDCIAFLPGIRQE Trigger: TTCCTGTCTGATACCTGGAAGAAAAGCTATACAATCAACACTGCAGGAAGAGGGAATGTGGCTCCACGGCTGCGTGTCCTCGTGGAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CCA 90 bp | TCTTCTTCATCCAGAGTTGCATCCTGCCGAGGGCCATCCATTGTATaGCGCTGTTCAATTTCTCGGACTTCGTGCCTTGCAATTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: SSSSRVASCRGPSIV*RCSISRTSCLAIAL Trigger: AAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGATGAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR TCA 90 bp | CGAGGACACGCAGCCGTGGAGCCACATTCCCTCTTCCTGCAGTGTTaGTTGTATAGCTTTTCTTCCAGGTATCAGACAGGAACACTTAAG | + |
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Preference number: 1 (lower is better) Translates to: RGHAAVEPHSLFLQC*LYSFSSRYQTGTLK Trigger: CTTAAGTGTTCCTGTCTGATACCTGGAAGAAAAGCTATACAATCAACACTGCAGGAAGAGGGAATGTGGCTCCACGGCTGCGTGTCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CCA 90 bp | AGCACTATCCAGCAGAGGTGGCGGCACAAACTCCAGAAGGGTAAGTaGCAAACAGACTCCTCTTCATTCAAGGAGAGGCAAAGAAATGCT | + |
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Preference number: 1 (lower is better) Translates to: STIQQRWRHKLQKGK*QTDSSSFKERQRNA Trigger: AGCATTTCTTTGCCTCTCCTTGAATGAAGAGGAGTCTGTTTGCCACTTACCCTTCTGGAGTTTGTGCCGCCACCTCTGCTGGATAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CCA 90 bp | GCTCCCATGACCTCACTCTGGACAGGCTGTAACAGCATGTCTACATaGCTCGAGAGTTCACCTTTAACAGGTCATAACAATCAGGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: APMTSLWTGCNSMST*LESSPLTGHNNQGP Trigger: TGGACCCTGATTGTTATGACCTGTTAAAGGTGAACTCTCGAGCCATGTAGACATGCTGTTACAGCCTGTCCAGAGTGAGGTCATGGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CCA 90 bp | TCATCAAGCCACATGGCATTAAAGTATAGGATGAATGTGACCAGATaGCCACCCAGCCCCTTGAATGTCTTTCCTCTCAGAAGACTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SSSHMALKYRMNVTR*PPSPLNVFPLRRLP Trigger: GGGCAGTCTTCTGAGAGGAAAGACATTCAAGGGGCTGGGTGGCCATCTGGTCACATTCATCCTATACTTTAATGCCATGTGGCTTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR GCA 90 bp | AGAGATGGAACCCTCAGACTCTACGACCTTTTCTATGACCACTACTaGCTCAGGGGTGAGCACTGTTCTCTATCAAACTTGAAAGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: RDGTLRLYDLFYDHY*LRGEHCSLSNLKGY Trigger: GTAGCCTTTCAAGTTTGATAGAGAACAGTGCTCACCCCTGAGGCAGTAGTGGTCATAGAAAAGGTCGTAGAGTCTGAGGGTTCCATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CCA 90 bp | AAGAGATGTGTCCGTGATAGAAGCCTGGCTTCATCTCGTTCCAGGTaGTTATGTTCTTCACAAAGCGCACCTGATCTTGCAATGACATTA | + |
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Preference number: 1 (lower is better) Translates to: KRCVRDRSLASSRSR*LCSSQSAPDLAMTL Trigger: TAATGTCATTGCAAGATCAGGTGCGCTTTGTGAAGAACATAACCACCTGGAACGAGATGAAGCCAGGCTTCTATCACGGACACATCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR CCA 90 bp | GCTCCTGGGACCATAGCTATGTTTGAAAATGATGGCTGGCAAAGCTaGCAAGATGACTTACACAGATGGTCTCTGAGCAGAATTTTAACA | + |
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Preference number: 1 (lower is better) Translates to: APGTIAMFENDGWQS*QDDLHRWSLSRILT Trigger: TGTTAAAATTCTGCTCAGAGACCATCTGTGTAAGTCATCTTGCCAGCTTTGCCAGCCATCATTTTCAAACATAGCTATGGTCCCAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CCA 90 bp | ACGCATACAAACTTGTCAAAAATTAAGCTAGCAAAGCTCTGTAGATaGGTGATGACCCAGGGCTTTCTGGTGACAGTATCTGAGCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: THTNLSKIKLAKLCR*VMTQGFLVTVSELS Trigger: TGAGAGCTCAGATACTGTCACCAGAAAGCCCTGGGTCATCACCCATCTACAGAGCTTTGCTAGCTTAATTTTTGACAAGTTTGTATGCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR TCA 90 bp | ATGAAACTATCAGCTAGAGATACTTCTGTGACAACACCTCACATTTaGACACCACGCCACAGTTTTAAAGTGCTCTTCGCCATGCCATCT | + |
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Preference number: 1 (lower is better) Translates to: MKLSARDTSVTTPHI*TPRHSFKVLFAMPS Trigger: AGATGGCATGGCGAAGAGCACTTTAAAACTGTGGCGTGGTGTTCAAATGTGAGGTGTTGTCACAGAAGTATCTCTAGCTGATAGTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR GCA 90 bp | GTTATTTTTGGTAGTGTTGATGTGAAGAACATGGTATCTATTCTTTaGACACAGGTCGTAGGCTATATTGGTGAACGAGGTGCTTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: VIFGSVDVKNMVSIL*TQVVGYIGERGACS Trigger: ACTGCAAGCACCTCGTTCACCAATATAGCCTACGACCTGTGTGCAAAGAATAGATACCATGTTCTTCACATCAACACTACCAAAAATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR GCA 90 bp | CGGTCTGAGTCTCTCGAGTGCATAAGCCGTTCACACTTCAATAGTTaGTTAAGCACAGAAGATAAAACACTGAGAAGATATTTATCAAAC | + |
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Preference number: 1 (lower is better) Translates to: RSESLECISRSHFNS*LSTEDKTLRRYLSN Trigger: GTTTGATAAATATCTTCTCAGTGTTTTATCTTCTGTGCTTAAGCAACTATTGAAGTGTGAACGGCTTATGCACTCGAGAGACTCAGACCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR TCA 90 bp | AAGAAATGCTTATGCAAACCTCTTCTGAAATGGTATTCAGCCATCTaGCTAAACGTCCATGTGTGTATTTTAGGCAATGTAAGTCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KKCLCKPLLKWYSAI*LNVHVCILGNVSPH Trigger: ATGGGGACTTACATTGCCTAAAATACACACATGGACGTTTAGTCAGATGGCTGAATACCATTTCAGAAGAGGTTTGCATAAGCATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CAA 90 bp | TTAAAAACTCCACAGGACTCCGCCAGCCCGCCAGCATCTCACTCCTaGACATTCATGTCTGTCCCCAGCTCAGCGTGGCTCACAGCTCGC | + |
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Preference number: 2 (lower is better) Translates to: LKTPQDSASPPASHS*TFMSVPSSAWLTAR Trigger: GCGAGCTGTGAGCCACGCTGAGCTGGGGACAGACATGAATGTCAAGGAGTGAGATGCTGGCGGGCTGGCGGAGTCCTGTGGAGTTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCATCCTCTTACCTAGAAACTTGCACTaGAAAGGACGGAGGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PEDRELQVLTRPAHPILLPRNLH*KGRRGK Trigger: CTTCCCCCTCCGTCCTTTCCAGTGCAAGTTTCTAGG...TAAGAGGATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CAA 90 bp | GGCCATCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCCTaGCAATTGCCCTTTCACATCGGCAGCATCTCCCTTACTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GHPLYGAVQFLGLRA*QLPFHIGSISLTGL Trigger: CAGCCCAGTAAGGGAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR-3UTR TCA 90 bp | TGTACTCCCCCAGCCCACACCCCCTGCACAAAGCAACTCTGTCCAAGGTACAACTGTCTGAGAGGAATCTaGATCCTGGCTGTAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CTPPAHTPCTKQLCPRYNCLRGI*ILAVKR Trigger: CCTCTTTACAGCCAGGATTCAGATTCCTCTCAGACA...GTTGTACCTTGGACAGAGTTGCTTTGTGCAGGGGGTGTGGGCTGGGGGAGTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGAAGGGAAACGTTGCTATGTTCCCCTAATACTTTCATCTCGGCGGAGCGTGCGGTCACCAATATaGCAGTGTTCAGGGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: EGEGKRCYVPLILSSRRSVRSPI*QCSGVQ Trigger: CTGTACCCCTGAACACTGGCATATTGGTGACCGCAC...GCTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR CCA 90 bp | TGTACTCCCCCAGCCCACACCCCCTGCACAAAGCAACTCTGTCCAAGGTACAACGATGGCTGGCAAAGCTaGCAAGATGACTTACACAGA | + |
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Preference number: 2 (lower is better) Translates to: CTPPAHTPCTKQLCPRYNDGWQS*QDDLHR Trigger: TCTGTGTAAGTCATCTTGCCAGCTTTGCCAGCCATC...GTTGTACCTTGGACAGAGTTGCTTTGTGCAGGGGGTGTGGGCTGGGGGAGTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CAA 90 bp | GACCTAGAAACTTGCACTGGAAAGGACGGAGGGGGAAGGGAAACGTaGCTATGTTCCCCTAATACTTTCATCTCGGCGGAGCCTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: DLETCTGKDGGGRET*LCSPNTFISAEPVT Trigger: AGTCACAGGCTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTCCGTCCTTTCCAGTGCAAGTTTCTAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTTGCATCCTGCCGAGGGCCATCCATTGTATGGCGCTGTTCAATTTCTCGTTCGTGCCTTGCAATTaGCCTTTCACATCGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QSCILPRAIHCMALFNFSFVPCN*PFTSAA Trigger: TGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAA...CGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCTTCATCCAGAGTTGCATCCTGCCGAGGGCCATCCATTGTATGGCGCTTCGGACTTCGTGCCTTaGAATTGCCCTTTCACATCG | + |
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Preference number: 2 (lower is better) Translates to: LLLHPELHPAEGHPLYGASDFVP*NCPFTS Trigger: CGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGA...AGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGATGAAGAAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCATCCTCTTAACGATCTGGGAGACATaGGAGGTAGAGGAACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PEDRELQVLTRPAHPILLTIWET*EVEELF Trigger: AAAGAGTTCCTCTACCTCCCATGTCTCCCAGATCGT...TAAGAGGATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CAA 90 bp | GCATTAAAGTATAGGATGAATGTGACCAGATGGCCACCCAGCCCCTaGAATGTCTTTCCTCTCAGAAGACTGCCCGCAGAGCAGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ALKYRMNVTRWPPSP*NVFPLRRLPAEQSV Trigger: GACAGACTGCTCTGCGGGCAGTCTTCTGAGAGGAAAGACATTCAAGGGGCTGGGTGGCCATCTGGTCACATTCATCCTATACTTTAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR CAA 90 bp | TGTCTTCTTCTTCATCCAGAGTTGCATCCTGCCGAGGGCCATCCATaGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCCTTGCAATTG | + |
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Preference number: 2 (lower is better) Translates to: CLLLHPELHPAEGHP*YGAVQFLGLRALQL Trigger: CAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGATGAAGAAGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCATCCTCTTACACATTCCCTCTTCCTaGAGTGTTGATTGTATAGCT | + |
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Preference number: 2 (lower is better) Translates to: PEDRELQVLTRPAHPILLHIPSS*SVDCIA Trigger: AGCTATACAATCAACACTGCAGGAAGAGGGAATGTG...TAAGAGGATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR TCA 90 bp | TATAGAAGGCTTTCCTGCTCCTCAGCTAGTGACGGTCTGAGTCTCTCGAGTGCATGGTATTCAGCCATCTaGCTAAACGTCCATGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: YRRLSCSSASDGLSLSSAWYSAI*LNVHVC Trigger: ACACACATGGACGTTTAGTCAGATGGCTGAATACCA...TGCACTCGAGAGACTCAGACCGTCACTAGCTGAGGAGCAGGAAAGCCTTCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR TCA 90 bp | ATTACACAGTTATATGTTCTAAGGACTCAGGCTCCCAGGACTCTTAGAGAAGCAGGCAGGGAGGTCAGGTaGCTTCCTAACGTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: ITQLYVLRTQAPRTLREAGREVR*LPNVTQ Trigger: CTGTGTGACGTTAGGAAGTCACCTGACCTCCCTGCC...TGCTTCTCTAAGAGTCCTGGGAGCCTGAGTCCTTAGAACATATAACTGTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGGAAGGGAAACGTTGCTATGTTCCCCTAATACTTTCATCTCGGCGGAGCAAGGTCTTAGTGTCCTaGTATCAAGATGAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: EGEGKRCYVPLILSSRRSKVLVS*YQDEEA Trigger: AGCTTCCTCATCTTGATATCAGGACACTAAGACCTT...GCTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCATCCTCTTATTACCTGGTCTTTTATaGGGACAGTTTAGGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PEDRELQVLTRPAHPILLLPGLL*GQFRES Trigger: ACTTTCCCTAAACTGTCCTCATAAAAGACCAGGTAA...TAAGAGGATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR CCA 90 bp | TGTACTCCCCCAGCCCACACCCCCTGCACAAAGCAACTCTGTCCAAGGTACAACGATGACTTACACAGATaGTCTCTGAGCAGAATTTTA | + |
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Preference number: 2 (lower is better) Translates to: CTPPAHTPCTKQLCPRYNDDLHR*SLSRIL Trigger: TAAAATTCTGCTCAGAGACCATCTGTGTAAGTCATC...GTTGTACCTTGGACAGAGTTGCTTTGTGCAGGGGGTGTGGGCTGGGGGAGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR GCA 90 bp | CGTTCCAGGTGGTTATGTTCTTCACAAAGCGCACCTGATCTTGCAATGACATTATCCAGAGTTGCATCCTaGCGAGGGCCATCCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: RSRWLCSSQSAPDLAMTLSRVAS*RGPSIV Trigger: TACAATGGATGGCCCTCGGCAGGATGCAACTCTGGA...TAATGTCATTGCAAGATCAGGTGCGCTTTGTGAAGAACATAACCACCTGGAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| 3UTR-3UTR TCA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGCACATCACAGCTCACTaGTGGAGTCGCCATGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRHITAH*WSRHVR Trigger: CCGCACATGGCGACTCCATCAGTGAGCTGTGATGTG...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCATCCTCTTAAGGAGTCAGGAATACTaGTTTAACTTTTTACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PEDRELQVLTRPAHPILLRSQEY*FNFLPS Trigger: AGAAGGTAAAAAGTTAAAGCAGTATTCCTGACTCCT...TAAGAGGATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAACTTGGAGTTTTGAGGGTTTTGGATATTTAAATCCAATGCTCAGGAGGCAGCATCTCACTCCTTaGCATTCATGTCTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LATWSFEGFGYLNPMLRRQHLTP*HSCLSP Trigger: TGGGGACAGACATGAATGTCAAGGAGTGAGATGCTG...CCTCCTGAGCATTGGATTTAAATATCCAAAACCCTCAAAACTCCAAGTTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR TCA 90 bp | ATTACACAGTTATATGTTCTAAGGACTCAGGCTCCCAGGACTCTTAGAGAAGCACCGAATCTGTACAGGTaGGCTAGGAAAACGAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: ITQLYVLRTQAPRTLREAPNLYR*ARKTSH Trigger: GTGACTCGTTTTCCTAGCTCACCTGTACAGATTCGG...TGCTTCTCTAAGAGTCCTGGGAGCCTGAGTCCTTAGAACATATAACTGTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTAGTCCTCACAACATCCCTGTGAGGCAGGGAGAGAAGGTCTTAGTGTCCGCAAAGAAATGCTTATaGAAACCTCTTCTGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: FLSPHNIPVRQGEKVLVSAKKCL*KPLLKW Trigger: CCATTTCAGAAGAGGTTTGCATAAGCATTTCTTTGC...GGACACTAAGACCTTCTCTCCCTGCCTCACAGGGATGTTGTGAGGACTAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| 3UTR-3UTR CCA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGCTTGGGGTCACGATCTaGGAGACATGGGAGGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRLGVTI*ETWEVE Trigger: CTCTACCTCCCATGTCTCCCAGATCGTGACCCCAAG...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTTACTCTACTGACCAGAATGGCTTCAGACCCAGAGAAAGTCTAAAGTTAATACTACGACCTTTTCTATaGCCACTACTGCCTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TYSTDQNGFRPRESLKLILRPFL*PLLPQG Trigger: CCCCTGAGGCAGTAGTGGTCATAGAAAAGGTCGTAG...TATTAACTTTAGACTTTCTCTGGGTCTGAAGCCATTCTGGTCAGTAGAGTAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGTGCCTCTCCTGTCTGTaGCAGCGACTTTCCAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRCLSCL*QRLSNS Trigger: ACTGTTGGAAAGTCGCTGTCACAGACAGGAGAGGCA...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCAACTTGGAGTTTTGAGGGTTTTGGATATTTAAATCCAATGCTCAGGAGGATGTTAGGGACTGTGTaGCTATCAGGGGACACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LATWSFEGFGYLNPMLRRMLGTV*LSGDTE Trigger: TTCTGTGTCCCCTGATAGTCACACAGTCCCTAACAT...CCTCCTGAGCATTGGATTTAAATATCCAAAACCCTCAAAACTCCAAGTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTACACAGTTATATGTTCTAAGGACTCAGGCTCCCAGGACTCTTAGAGAAGCATCCAATATTGGATACTaGGGTGACAGGAGTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ITQLYVLRTQAPRTLREASNIGY*GDRSQE Trigger: TTCCTGACTCCTGTCACCCCAGTATCCAATATTGGA...TGCTTCTCTAAGAGTCCTGGGAGCCTGAGTCCTTAGAACATATAACTGTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTAGTGTTGATGTGAAGAACATGGTATCTATTCTTTGCACACAGGTCGTAGGGCCATCCATTGTATaGCGCTGTTCAATTTCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: FGSVDVKNMVSILCTQVVGPSIV*RCSISR Trigger: CCGAGAAATTGAACAGCGCCATACAATGGATGGCCC...TACGACCTGTGTGCAAAGAATAGATACCATGTTCTTCACATCAACACTACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTTACTCTACTGACCAGAATGGCTTCAGACCCAGAGAAAGTCTAAAGTTAATAGGAAAACGAGTCACCTaGCAGCAAGGTAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TYSTDQNGFRPRESLKLIGKRVT*QQGKTE Trigger: TTCTGTCTTACCTTGCTGTCAGGTGACTCGTTTTCC...TATTAACTTTAGACTTTCTCTGGGTCTGAAGCCATTCTGGTCAGTAGAGTAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTTACTCTACTGACCAGAATGGCTTCAGACCCAGAGAAAGTCTAAAGTTAATACAACAGCCAGATGCCTaGCTGGACAAGAAAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: TYSTDQNGFRPRESLKLIQQPDA*LDKKTT Trigger: AGTTGTTTTCTTGTCCAGGCAGGCATCTGGCTGTTG...TATTAACTTTAGACTTTCTCTGGGTCTGAAGCCATTCTGGTCAGTAGAGTAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTTACTCTACTGACCAGAATGGCTTCAGACCCAGAGAAAGTCTAAAGTTAATAACAACACCTCACATTTaGACACCACGCCACAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TYSTDQNGFRPRESLKLITTPHI*TPRHSF Trigger: AAAACTGTGGCGTGGTGTTCAAATGTGAGGTGTTGT...TATTAACTTTAGACTTTCTCTGGGTCTGAAGCCATTCTGGTCAGTAGAGTAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | TACTGGGGTGACAGGAGTCAGGAATACTGCTTTAACTTTTTACCTTCTTACAGTTATGCAAACCTCTTCTaGAATGGTATTCAGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: YWGDRSQEYCFNFLPSYSYANLF*NGIQPS Trigger: AGATGGCTGAATACCATTTCAGAAGAGGTTTGCATA...ACTGTAAGAAGGTAAAAAGTTAAAGCAGTATTCCTGACTCCTGTCACCCCAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTACACAGTTATATGTTCTAAGGACTCAGGCTCCCAGGACTCTTAGAGAAGCAGTAGCAGAAATGTTCTaGGAAAACACGATCAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: ITQLYVLRTQAPRTLREAVAEMF*ENTIKH Trigger: ATGTTTGATCGTGTTTTCCCAGAACATTTCTGCTAC...TGCTTCTCTAAGAGTCCTGGGAGCCTGAGTCCTTAGAACATATAACTGTGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | ACTTACTCTACTGACCAGAATGGCTTCAGACCCAGAGAAAGTCTAAAGTTAATAGTTCTCTATCAAACTTaGAAGGCTACGTTAGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TYSTDQNGFRPRESLKLIVLYQT*KATLAH Trigger: ATGAGCTAACGTAGCCTTTCAAGTTTGATAGAGAAC...TATTAACTTTAGACTTTCTCTGGGTCTGAAGCCATTCTGGTCAGTAGAGTAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR TCA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGCTAGAGATACTTCTGTaGCAACACCTCACATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRLEILL*QHLTFE Trigger: TTCAAATGTGAGGTGTTGTCACAGAAGTATCTCTAG...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 90 bp | ATGACTAATAAACACAAGGCAACCAAAGACAAAACGCATACAAACTaGTCAAAAATTAAGCTAGCAAAGCTCTGTAGATGGGTGATGACC | + |
|
Preference number: 2 (lower is better) Translates to: MTNKHKATKDKTHTN*SKIKLAKLCRWVMT Trigger: GGTCATCACCCATCTACAGAGCTTTGCTAGCTTAATTTTTGACAAGTTTGTATGCGTTTTGTCTTTGGTTGCCTTGTGTTTATTAGTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 90 bp | AAAGCCTCAGATAATGTCCACATTCTTAGAAATATCATTCCAATATaGGATACTGGGGTGACAGGAGTCAGGAATACTGCTTTAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KASDNVHILRNIIPI*DTGVTGVRNTALTF Trigger: AAAAGTTAAAGCAGTATTCCTGACTCCTGTCACCCCAGTATCCAATATTGGAATGATATTTCTAAGAATGTGGACATTATCTGAGGCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | CACAGGACTCCGCCAGCCCGCCAGCATCTCACTCCTTaGCATTCATGTCTGTCCCCAGCTCAGCGTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HRTPPARQHLTP*HSCLSPAQRGS Trigger: TGAGCCACGCTGAGCTGGGGACAGACATGAATGTCAAGGAGTGAGATGCTGGCGGGCTGGCGGAGTCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | TCAGGAGGCCAGAAGCAGCGGATGTTAGGGACTGTGTaGCTATCAGGGGACACAGAAGCAGCTCCTATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SGGQKQRMLGTV*LSGDTEAAPMR Trigger: CCGCATAGGAGCTGCTTCTGTGTCCCCTGATAGTCACACAGTCCCTAACATCCGCTGCTTCTGGCCTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | CTGTTGTTCTCAGGATGTAAGGGCCATGGGCTGCCCTaGAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFSGCKGHGLP*RQRAPSANQAC Trigger: GCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGGGCAGCCCATGGCCCTTACATCCTGAGAACAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | CGCTGCTGTTGTTCTCAGGATGTAAGGGCCATGGGCTaGCCTGAAGACAGAGAGCTCCAAGTGCTAACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RCCCSQDVRAMG*PEDRELQVLTR Trigger: CCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGGGCAGCCCATGGCCCTTACATCCTGAGAACAACAGCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | CAGAAAGCAGTCCTTGGGGTCACGATCTGGGAGACATaGGAGGTAGAGGAACTCTTTGGGGAACGTGGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: QKAVLGVTIWET*EVEELFGERGP Trigger: CGGACCACGTTCCCCAAAGAGTTCCTCTACCTCCCATGTCTCCCAGATCGTGACCCCAAGGACTGCTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTGCATCCTGCCGAGGGCCATCCATTGTATGGCGCTGTTCAATTTCTCGCTTCGTGCCTTGCAATaGCCCTTTCACATCGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QSCILPRAIHCMALFNFSLRALQ*PFHIGS Trigger: GCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAG...CGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR GCA 72 bp | CTACCCACATCACAGCTCACTGATGGAGTCGCCATGTaGGGTCACCAATATGCCAGTGTTCAGGGGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPTSQLTDGVAM*GHQYASVQGYR Trigger: TCTGTACCCCTGAACACTGGCATATTGGTGACCGCACATGGCGACTCCATCAGTGAGCTGTGATGTGGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | CTTGCACTGGAAAGGACGGAGGGGGAAGGGAAACGTTaGTATGTTCCCCTAATACTTTCATCTCGGCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LALERTEGEGKR*YVPLILSSRRS Trigger: GCTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTCCGTCCTTTCCAGTGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | CAGCAGAAGAAAACGTTCCACGAGGACACGCAGCCGTaGAGCCACATTCCCTCTTCCTGCAGTGTTGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: QQKKTFHEDTQP*SHIPSSCSVDC Trigger: ACAATCAACACTGCAGGAAGAGGGAATGTGGCTCCACGGCTGCGTGTCCTCGTGGAACGTTTTCTTCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | TCCAGAGTTGCATCCTGCCGAGGGCCATCCATTGTATaGCGCTGTTCAATTTCTCGGACTTCGTGCCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRVASCRGPSIV*RCSISRTSCLA Trigger: TGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR TCA 72 bp | CGAATCTGTACAGGTGAGCTAGGAAAACGAGTCACCTaGCAGCAAGGTAAGACAGAAGGAAGCTGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RICTGELGKRVT*QQGKTEGSWGG Trigger: CCCTCCCCAGCTTCCTTCTGTCTTACCTTGCTGTCAGGTGACTCGTTTTCCTAGCTCACCTGTACAGATTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | ACCAACAAAATGCTGAACTTGTGGCGATCTCTGCGGTaGCGCTGCTGTTGTTCTCAGGATGTAAGGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: TNKMLNLWRSLR*RCCCSQDVRAM Trigger: CATGGCCCTTACATCCTGAGAACAACAGCAGCGCCACCGCAGAGATCGCCACAAGTTCAGCATTTTGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | GAGGACACGCAGCCGTGGAGCCACATTCCCTCTTCCTaGAGTGTTGATTGTATAGCTTTTCTTCCAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: EDTQPWSHIPSS*SVDCIAFLPGI Trigger: GATACCTGGAAGAAAAGCTATACAATCAACACTGCAGGAAGAGGGAATGTGGCTCCACGGCTGCGTGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTTCATCTCGTTCCAGGTGGTTATGTTCTTCACAAAGCGCACCTGATCTTGCCGAGGGCCATCCATaGTATGGCGCTGTTCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: LASSRSRWLCSSQSAPDLAEGHP*YGAVQF Trigger: AAATTGAACAGCGCCATACAATGGATGGCCCTCGGC...AAGATCAGGTGCGCTTTGTGAAGAACATAACCACCTGGAACGAGATGAAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR TCA 72 bp | ATAGAAGGCTTTCCTGCTCCTCAGCTAGTGACGGTCTaGGTCTCTCGAGTGCATAAGCCGTTCACACTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IEGFPAPQLVTV*VSRVHKPFTLQ Trigger: TTGAAGTGTGAACGGCTTATGCACTCGAGAGACTCAGACCGTCACTAGCTGAGGAGCAGGAAAGCCTTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | CCCCTGCACAAAGCAACTCTGTCCAAGGTACAACGATaGGAAGACTTGACAGCAATGGCACTAGTATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLHKATLSKVQR*EDLTAMALVCH Trigger: GTGACATACTAGTGCCATTGCTGTCAAGTCTTCGCATCGTTGTACCTTGGACAGAGTTGCTTTGTGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | TGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCCTTaGAATTGCCCTTTCACATCGGCAGCATCTCCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CMALFNFSDFVP*NCPFTSAASPL Trigger: TAAGGGAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR GCA 72 bp | TCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTaGCTTGCAATTGCCCTTTCACATCGGCAGCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SIVWRCSISRTS*LAIALSHRQHL Trigger: GAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR CCA 72 bp | GTCCGTGATAGAAGCCTGGCTTCATCTCGTTCCAGGTaGTTATGTTCTTCACAAAGCGCACCTGATCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VRDRSLASSRSR*LCSSQSAPDLA Trigger: TGCAAGATCAGGTGCGCTTTGTGAAGAACATAACCACCTGGAACGAGATGAAGCCAGGCTTCTATCACGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR GCA 72 bp | ACCCTCAGACTCTACGACCTTTTCTATGACCACTACTaGCTCAGGGGTGAGCACTGTTCTCTATCAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TLRLYDLFYDHY*LRGEHCSLSNL Trigger: CAAGTTTGATAGAGAACAGTGCTCACCCCTGAGGCAGTAGTGGTCATAGAAAAGGTCGTAGAGTCTGAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | AACAACTTGCTTTTAGCAGGACCTAGAAACTTGCACTaGAAAGGACGGAGGGGGAAGGGAAACGTTGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: NNLLLAGPRNLH*KGRRGKGNVAM Trigger: CATAGCAACGTTTCCCTTCCCCCTCCGTCCTTTCCAGTGCAAGTTTCTAGGTCCTGCTAAAAGCAAGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTACACAGTTATATGTTCTAAGGACTCAGGCTCCCAGGACTCTTAGAGAAGCATCTAACCACGGCCCTTaGCCTCTCCTGTCTGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ITQLYVLRTQAPRTLREASNHGP*PLLSVT Trigger: TGTCACAGACAGGAGAGGCAAAGGGCCGTGGTTAGA...TGCTTCTCTAAGAGTCCTGGGAGCCTGAGTCCTTAGAACATATAACTGTGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAGAAGGCTTTCCTGCTCCTCAGCTAGTGACGGTCTGAGTCTCTCGAGTGCATGTTCTCTATCAAACTaGAAAGGCTACGTTAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YRRLSCSSASDGLSLSSACSLSN*KGYVSS Trigger: TGAGCTAACGTAGCCTTTCAAGTTTGATAGAGAACA...TGCACTCGAGAGACTCAGACCGTCACTAGCTGAGGAGCAGGAAAGCCTTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | CTGTGTGACTATCAGGGGACACAGAAGCAGCTCCTATaGGGTGCTTCAAGGTTTGCTACCAGATATATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LCDYQGTQKQLL*GASRFATRYIQ Trigger: TTGAATATATCTGGTAGCAAACCTTGAAGCACCGCATAGGAGCTGCTTCTGTGTCCCCTGATAGTCACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | TACTGCCAAACATATTTTAGCACTATCCAGCAGAGGTaGCGGCACAAACTCCAGAAGGGTAAGTGGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: YCQTYFSTIQQR*RHKLQKGKWQT Trigger: TGTTTGCCACTTACCCTTCTGGAGTTTGTGCCGCCACCTCTGCTGGATAGTGCTAAAATATGTTTGGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CCA 72 bp | GCTCCTGGGACCATAGCTATGTTTGAAAATGATGGCTaGCAAAGCTGGCAAGATGACTTACACAGATGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: APGTIAMFENDG*QSWQDDLHRWS Trigger: AGACCATCTGTGTAAGTCATCTTGCCAGCTTTGCCAGCCATCATTTTCAAACATAGCTATGGTCCCAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR-3UTR CAA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGGCAGGACCTAGAAACTaGCACTGGAAAGGACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRAGPRN*HWKGRR Trigger: CCTCCGTCCTTTCCAGTGCAAGTTTCTAGGTCCTGC...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | TCAGCTAGAGATACTTCTGTGACAACACCTCACATTTaGACACCACGCCACAGTTTTAAAGTGCTCTTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SARDTSVTTPHI*TPRHSFKVLFA Trigger: GGCGAAGAGCACTTTAAAACTGTGGCGTGGTGTTCAAATGTGAGGTGTTGTCACAGAAGTATCTCTAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | AACAAGAACATCCTTCAAGTTTATAGAAGGCTTTCCTaGTCCTCAGCTAGTGACGGTCTGAGTCTCTCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NKNILQVYRRLS*SSASDGLSLSS Trigger: ACTCGAGAGACTCAGACCGTCACTAGCTGAGGAGCAGGAAAGCCTTCTATAAACTTGAAGGATGTTCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | ATGATTATGTCTTCTTCTTCATCCAGAGTTGCATCCTaGCGAGGGCCATCCATTGTATGGCGCTGTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: MIMSSSSSRVAS*RGPSIVWRCSI Trigger: AATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGATGAAGAAGAAGACATAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR CCA 72 bp | ACCTCACTCTGGACAGGCTGTAACAGCATGTCTACATaGCTCGAGAGTTCACCTTTAACAGGTCATAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSLWTGCNSMST*LESSPLTGHNN Trigger: ATTGTTATGACCTGTTAAAGGTGAACTCTCGAGCCATGTAGACATGCTGTTACAGCCTGTCCAGAGTGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | TATGTTCCCCTAATACTTTCATCTCGGCGGAGCCTGTaGCTCAGTCGTTCCTTTAATCTTCCTAAGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YVPLILSSRRSL*LSRSFNLPKCF Trigger: AAAGCACTTAGGAAGATTAAAGGAACGACTGAGTCACAGGCTCCGCCGAGATGAAAGTATTAGGGGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | ATCTATTCTTTGCACACAGGTCGTAGGCTATATTGGTaGACGAGGTGCTTGCAGTTTTGGGCACTCTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: IYSLHTGRRLYW*TRCLQFWALCY Trigger: ATAACAGAGTGCCCAAAACTGCAAGCACCTCGTTCACCAATATAGCCTACGACCTGTGTGCAAAGAATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR GCA 72 bp | GGTAGTGTTGATGTGAAGAACATGGTATCTATTCTTTaGACACAGGTCGTAGGCTATATTGGTGAACGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSVDVKNMVSIL*TQVVGYIGERG Trigger: ACCTCGTTCACCAATATAGCCTACGACCTGTGTGCAAAGAATAGATACCATGTTCTTCACATCAACACTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR CCA 72 bp | AACTTGTCAAAAATTAAGCTAGCAAAGCTCTGTAGATaGGTGATGACCCAGGGCTTTCTGGTGACAGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: NLSKIKLAKLCR*VMTQGFLVTVS Trigger: AGATACTGTCACCAGAAAGCCCTGGGTCATCACCCATCTACAGAGCTTTGCTAGCTTAATTTTTGACAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR TCA 72 bp | CCATTTCTCAGCAATAAGAAGACGGTTGGTACAAGCTaGACACACAAAGCTACCTCTTCTTCTGTAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PFLSNKKTVGTS*THKATSSSVGN Trigger: ATTTCCTACAGAAGAAGAGGTAGCTTTGTGTGTTCAGCTTGTACCAACCGTCTTCTTATTGCTGAGAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR GCA 72 bp | ACACAGGTCGTAGGCTATATTGGTGAACGAGGTGCTTaGAGTTTTGGGCACTCTGTTATAAATGATGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: TQVVGYIGERGA*SFGHSVINDDY Trigger: ATAATCATCATTTATAACAGAGTGCCCAAAACTGCAAGCACCTCGTTCACCAATATAGCCTACGACCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR TCA 72 bp | GGTTATGTTCTTCACAAAGCGCACCTGATCTTGCAATaGCATTACTGGGTTATTTTTGGTAGTGTTGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GYVLHKAHLILQ*HYWVIFGSVDV Trigger: CACATCAACACTACCAAAAATAACCCAGTAATGTCATTGCAAGATCAGGTGCGCTTTGTGAAGAACATAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR TCA 72 bp | ACCTTATATATCTCCAATTTGAAATGTCAACACCGATaGCTAATAAACACAAGGCAACCAAAGACAAAACGC | + |
|
Preference number: 3 (lower is better) Translates to: TLYISNLKCQHR*LINTRQPKTKR Trigger: GCGTTTTGTCTTTGGTTGCCTTGTGTTTATTAGTCATCGGTGTTGACATTTCAAATTGGAGATATATAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | CCACAGGACTCCGCCAGCCCGCCAGCATCTCACTCCTaGACATTCATGTCTGTCCCCAGCTCAGCGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQDSASPPASHS*TFMSVPSSAWL Trigger: GAGCCACGCTGAGCTGGGGACAGACATGAATGTCAAGGAGTGAGATGCTGGCGGGCTGGCGGAGTCCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCGCACACGCATCAGCAGGGGGCTGAGAAGGGTGGTGACACAGTCAAGAAGCCAGAGCTTCTCTaGAGCACAGTCGGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHTHQQGAEKGGDTVKKPELL*STVGAA Trigger: GGCGGCTCCGACTGTGCTCCAGAGAAGCTCTGGCTT...CTTGACTGTGTCACCACCCTTCTCAGCCCCCTGCTGATGCGTGTGCGAGCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR TCA 90 bp | CACAGCTCACTGATGGAGTCGCCATGTGCGGTCACCAATATGCCAGTGTTCAGGCAGCGTGAGCTCGGATaGACTGGAACTGCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSLMESPCAVTNMPVFRQRELG*TGTAPE Trigger: CTCTGGAGCAGTTCCAGTTCATCCGAGCTCACGCTG...CCTGAACACTGGCATATTGGTGACCGCACATGGCGACTCCATCAGTGAGCTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | CCTGAAGACAGAGAGCTCCAAGTGCTAACCAGGCCTGCACACCCCATCCTCTTAACCACCGCCAGCAGCTaGAACTTGGGCGGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: PEDRELQVLTRPAHPILLTTASS*NLGGII Trigger: TATGATGCCGCCCAAGTTGCAGCTGCTGGCGGTGGT...TAAGAGGATGGGGTGTGCAGGCCTGGTTAGCACTTGGAGCTCTCTGTCTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCTCGCACACGCATCAGCAGGGGGCTGAGAAGGGTGGTGACACAGTCAAGGACTCCTCCAGCTTCTaGATCTGGTTCTCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSHTHQQGAEKGGDTVKDSSSF*IWFSKK Trigger: CTTCTTGGAGAACCAGATCCAGAAGCTGGAGGAGTC...CTTGACTGTGTCACCACCCTTCTCAGCCCCCTGCTGATGCGTGTGCGAGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | TTCATCCAGAGTTGCATCCTGCCGAGGGCCATCCATTGTATGGCGCTGTTCAATACCACCGCCAGCAGCTaGAACTTGGGCGGCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: FIQSCILPRAIHCMALFNTTASS*NLGGII Trigger: TATGATGCCGCCCAAGTTGCAGCTGCTGGCGGTGGT...ATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR CAA 72 bp | GGCGCTGTTCAATTTCTCGGACTTCGTGCCTTGCAATaGCCCTTTCACATCGGCAGCATCTCCCTTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAVQFLGLRALQ*PFHIGSISLTG Trigger: CCCAGTAAGGGAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| 3UTR CAA 72 bp | CTTCATCCAGAGTTGCATCCTGCCGAGGGCCATCCATaGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHPELHPAEGHP*YGAVQFLGLRA Trigger: GGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGATGCAACTCTGGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| CDS-3UTR TCA 90 bp | CGAACTCTCAAGAATAACCTCAGATTTACTCAACAGCCAGATGCCTGCCTGGACCCTCGAGCTCCTCGGTaGCTCCCACCAGGAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RTLKNNLRFTQQPDACLDPRAPR*LPPGST Trigger: AGTACTTCCTGGTGGGAGTCACCGAGGAGCTCGAGG...GTCCAGGCAGGCATCTGGCTGTTGAGTAAATCTGAGGTTATTCTTGAGAGTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | ACTTGCACTGGAAAGGACGGAGGGGGAAGGGAAACGTaGCTATGTTCCCCTAATACTTTCATCTCGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCTGKDGGGRET*LCSPNTFISAE Trigger: CTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTCCGTCCTTTCCAGTGCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | TATAGGATGAATGTGACCAGATGGCCACCCAGCCCCTaGAATGTCTTTCCTCTCAGAAGACTGCCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRMNVTRWPPSP*NVFPLRRLPAE Trigger: CTCTGCGGGCAGTCTTCTGAGAGGAAAGACATTCAAGGGGCTGGGTGGCCATCTGGTCACATTCATCCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | CCTAGAAACTTGCACTGGAAAGGACGGAGGGGGAAGGGAAACGTTGCTATGTTCGGTCCATGGCCCATCTaGTCCCTACATTCCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PRNLHWKGRRGKGNVAMFGPWPI*SLHSSI Trigger: AATGCTGGAATGTAGGGAGCAGATGGGCCATGGACC...GAACATAGCAACGTTTCCCTTCCCCCTCCGTCCTTTCCAGTGCAAGTTTCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTGCCGAGGGCCATCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTGTTACAGGTCATCTCCTaGCCATCTTCCCAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILPRAIHCMALFNFSDFVLQVIS*PSSQIP Trigger: TGGAATCTGGGAAGATGGGCAGGAGATGACCTGTAA...CACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCGGCAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGAAACTTGCACTGGAAAGGACGGAGGGGGAAGGGAAACGTTGCTATGTTCGGGCCATCCATTGTATaGCGCTGTTCAATTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRNLHWKGRRGKGNVAMFGPSIV*RCSISR Trigger: CCGAGAAATTGAACAGCGCCATACAATGGATGGCCC...GAACATAGCAACGTTTCCCTTCCCCCTCCGTCCTTTCCAGTGCAAGTTTCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGAAGGGAAACGTTGCTATGTTCCCCTAATACTTTCATCTCGGCGGAGCATTTCTCGGACTTCGTaGCTTGCAATTGCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGEGKRCYVPLILSSRRSISRTS*LAIALS Trigger: AGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAAT...GCTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | TTGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCCTaGCAATTGCCCTTTCACATCGGCAGCATCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYGAVQFLGLRA*QLPFHIGSISL Trigger: AAGGGAGATGCTGCCGATGTGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| CDS-3UTR TCA 90 bp | TATAGAAGGCTTTCCTGCTCCTCAGCTAGTGACGGTCTGAGTCTCTCGAGTGCAGTGGTTTTCCTAAGGTaGGATTTCTTTCCTGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: YRRLSCSSASDGLSLSSAVVFLR*DFFPVR Trigger: CCGTACAGGAAAGAAATCTCACCTTAGGAAAACCAC...TGCACTCGAGAGACTCAGACCGTCACTAGCTGAGGAGCAGGAAAGCCTTCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR TCA 90 bp | TATAGAAGGCTTTCCTGCTCCTCAGCTAGTGACGGTCTGAGTCTCTCGAGTGCATTCACAAAGCGCACCTaGTCTTGCAATGACATTACT | + |
|
Preference number: 4 (lower is better) Translates to: YRRLSCSSASDGLSLSSAFTKRT*SCNDIT Trigger: AGTAATGTCATTGCAAGATCAGGTGCGCTTTGTGAA...TGCACTCGAGAGACTCAGACCGTCACTAGCTGAGGAGCAGGAAAGCCTTCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR TCA 90 bp | CGAACTCTCAAGAATAACCTCAGATTTACTCAACAGCCAGATGCCTGCCTGGACTACATTCCAGCATTCTaGGCTGTGGCCACAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLKNNLRFTQQPDACLDYIPAF*AVATEE Trigger: TTCTTCTGTGGCCACAGCTCAGAATGCTGGAATGTA...GTCCAGGCAGGCATCTGGCTGTTGAGTAAATCTGAGGTTATTCTTGAGAGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR TCA 90 bp | TACTGGGGTGACAGGAGTCAGGAATACTGCTTTAACTTTTTACCTTCTTACAGTCAGAAGAACGGGATCTaGAGCCAGAGCTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YWGDRSQEYCFNFLPSYSQKNGI*SQSFSG Trigger: TCCAGAGAAGCTCTGGCTTCAGATCCCGTTCTTCTG...ACTGTAAGAAGGTAAAAAGTTAAAGCAGTATTCCTGACTCCTGTCACCCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR CCA 90 bp | TACTGGGGTGACAGGAGTCAGGAATACTGCTTTAACTTTTTACCTTCTTACAGTCAGCATTCTGAGCTGTaGCCACAGAAGAACGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YWGDRSQEYCFNFLPSYSQHSEL*PQKNGI Trigger: GATCCCGTTCTTCTGTGGCCACAGCTCAGAATGCTG...ACTGTAAGAAGGTAAAAAGTTAAAGCAGTATTCCTGACTCCTGTCACCCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | TCAACAGCCAGATGCCTGCCTGGACAAGAAAACAACTaGCTTTTAGCAGGACCTAGAAACTTGCACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STARCLPGQENN*LLAGPRNLHWK Trigger: TTTCCAGTGCAAGTTTCTAGGTCCTGCTAAAAGCAAGTTGTTTTCTTGTCCAGGCAGGCATCTGGCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | ATTACACAGTTATATGTTCTAAGGACTCAGGCTCCCAGGACTCTTAGAGAAGCATTCCAAATGTCAGACTaGTGCAGCTTCGCGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITQLYVLRTQAPRTLREAFQMSD*CSFAIV Trigger: GACTATCGCGAAGCTGCAGCAGTCTGACATTTGGAA...TGCTTCTCTAAGAGTCCTGGGAGCCTGAGTCCTTAGAACATATAACTGTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACATGGTATCTATTCTTTGCACACAGGTCGTAGGCTATATTGGTGAACGAGACTCCTCCAGCTTCTaGATCTGGTTCTCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNMVSILCTQVVGYIGERDSSSF*IWFSKK Trigger: CTTCTTGGAGAACCAGATCCAGAAGCTGGAGGAGTC...TCGTTCACCAATATAGCCTACGACCTGTGTGCAAAGAATAGATACCATGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAGATAATGTCCACATTCTTAGAAATATCATTCCAATATTGGATACTGGGGTCCAGAGTTGCATCCTaGCGAGGGCCATCCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQIMSTFLEISFQYWILGSRVAS*RGPSIV Trigger: TACAATGGATGGCCCTCGGCAGGATGCAACTCTGGA...CCCCAGTATCCAATATTGGAATGATATTTCTAAGAATGTGGACATTATCTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAGATAATGTCCACATTCTTAGAAATATCATTCCAATATTGGATACTGGGGGGTGAACGAGGTGCTTaGAGTTTTGGGCACTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIMSTFLEISFQYWILGGERGA*SFGHSV Trigger: AACAGAGTGCCCAAAACTGCAAGCACCTCGTTCACC...CCCCAGTATCCAATATTGGAATGATATTTCTAAGAATGTGGACATTATCTGAGG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAGATAATGTCCACATTCTTAGAAATATCATTCCAATATTGGATACTGGGGCAAATGTCAGACTGCTaGAGCTTCGCGATAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQIMSTFLEISFQYWILGQMSDC*SFAIVC Trigger: GCAGACTATCGCGAAGCTGCAGCAGTCTGACATTTG...CCCCAGTATCCAATATTGGAATGATATTTCTAAGAATGTGGACATTATCTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | ATCAATAGTGGCCATTTCTCAGCAATAAGAAGACGGTaGGTACAAGCTGAACACACAAAGCTACCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: INSGHFSAIRRR*VQAEHTKLPLL Trigger: AAGAAGAGGTAGCTTTGTGTGTTCAGCTTGTACCAACCGTCTTCTTATTGCTGAGAAATGGCCACTATTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | GATAATGTCCACATTCTTAGAAATATCATTCCAATATaGGATACTGGGGTGACAGGAGTCAGGAATACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNVHILRNIIPI*DTGVTGVRNTA Trigger: AGCAGTATTCCTGACTCCTGTCACCCCAGTATCCAATATTGGAATGATATTTCTAAGAATGTGGACATTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR TCA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGTTGGTAGTGTTGATGTaGAGAACATGGTATCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRLVVLM*RTWYLF Trigger: GAATAGATACCATGTTCTTCACATCAACACTACCAA...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | AAACACAAGGCAACCAAAGACAAAACGCATACAAACTaGTCAAAAATTAAGCTAGCAAAGCTCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KHKATKDKTHTN*SKIKLAKLCRW Trigger: CCATCTACAGAGCTTTGCTAGCTTAATTTTTGACAAGTTTGTATGCGTTTTGTCTTTGGTTGCCTTGTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| 3UTR CAA 72 bp | TATCCCAACAGCCTGCTCCCATTTTATTTCTTCCTCTaGCTAACTGAATGCCTAAGTATACCTTATATATCT | + |
|
Preference number: 4 (lower is better) Translates to: YPNSLLPFYFFL*LTECLSIPYIS Trigger: AGATATATAAGGTATACTTAGGCATTCAGTTAGCAAGAGGAAGAAATAAAATGGGAGCAGGCTGTTGGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAGATAATGTCCACATTCTTAGAAATATCATTCCAATATTGGATACTGGGGCACCTGATCTTGCAATaGCATTACTGGGTTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PQIMSTFLEISFQYWILGHLILQ*HYWVIF Trigger: AAAAATAACCCAGTAATGTCATTGCAAGATCAGGTG...CCCCAGTATCCAATATTGGAATGATATTTCTAAGAATGTGGACATTATCTGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR GCA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGCTTCACACCGAATTTTaGAAAATCCAAGTAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRLHTEF*KIQVRD Trigger: ATCTCTTACTTGGATTTTGCAAAATTCGGTGTGAAG...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS CCA 90 bp | GGAAAGCCATCTAGCTTCGCCCGGGACTCCTCCAGCTTCTGGATCTaGTTCTCCAAGAAGAGCATCGCCACCGCGAAGGCCACCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKPSSFARDSSSFWI*FSKKSIATAKATTA Trigger: GGCGGTGGTGGCCTTCGCGGTGGCGATGCTCTTCTTGGAGAACCAGATCCAGAAGCTGGAGGAGTCCCGGGCGAAGCTAGATGGCTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| CDS CCA 90 bp | ATTGCCCTTTCTAGCTTCGCCCGGGACTCCTCCAGCTTCTGGATCTaGTTCTCCAAGAAGAGCATCGCCACCGCGAAGGCCACCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: IALSSFARDSSSFWI*FSKKSIATAKATTA Trigger: GGCGGTGGTGGCCTTCGCGGTGGCGATGCTCTTCTTGGAGAACCAGATCCAGAAGCTGGAGGAGTCCCGGGCGAAGCTAGAAAGGGCAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS CCA 90 bp | ACACCGGGAAAGCCATCTAGCTTCGCCCGGGACTCCTCCAGCTTCTaGATCTGGTTCTCCAAGAAGAGCATCGCCACCGCGAAGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TPGKPSSFARDSSSF*IWFSKKSIATAKAT Trigger: GGTGGCCTTCGCGGTGGCGATGCTCTTCTTGGAGAACCAGATCCAGAAGCTGGAGGAGTCCCGGGCGAAGCTAGATGGCTTTCCCGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
||
| CDS CCA 90 bp | CTTGCAATTGCCCTTTCTAGCTTCGCCCGGGACTCCTCCAGCTTCTaGATCTGGTTCTCCAAGAAGAGCATCGCCACCGCGAAGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LAIALSSFARDSSSF*IWFSKKSIATAKAT Trigger: GGTGGCCTTCGCGGTGGCGATGCTCTTCTTGGAGAACCAGATCCAGAAGCTGGAGGAGTCCCGGGCGAAGCTAGAAAGGGCAATTGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS GCA 90 bp | CGAGGGCCATCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTaGCTTGCAATTGCCCTTTCTAGCTTCGCCCGGGACTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGPSIVWRCSISRTS*LAIALSSFARDSSS Trigger: GCTGGAGGAGTCCCGGGCGAAGCTAGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGATGGCCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGGGAAGGGAAACGTTGCTATGTTCCCCTAATACTTTCATCTCGGCGGAGCGCCAGCAGCTGCAACTaGGGCGGCATCATAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGEGKRCYVPLILSSRRSASSCN*GGIIIL Trigger: CAGGATTATGATGCCGCCCAAGTTGCAGCTGCTGGC...GCTCCGCCGAGATGAAAGTATTAGGGGAACATAGCAACGTTTCCCTTCCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCTCACTGATGGAGTCGCCATGTGCGGTCACCAATATGCCAGTGTTCAGGGCCGAGGGCCATCCATaGTATGGCGCTGTTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HSSLMESPCAVTNMPVFRAEGHP*YGAVQF Trigger: AAATTGAACAGCGCCATACAATGGATGGCCCTCGGC...CCTGAACACTGGCATATTGGTGACCGCACATGGCGACTCCATCAGTGAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS TCA 90 bp | GGATGTAGAGGTCTCCGTCTTTCTCGCGGACAGCGTGAGCTCGGATaGACTGGAACTGCTCCAGAGCAAACTCATAGAACTCATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCRGLRLSRGQRELG*TGTAPEQTHRTHSP Trigger: TGGAGAATGAGTTCTATGAGTTTGCTCTGGAGCAGTTCCAGTTCATCCGAGCTCACGCTGTCCGCGAGAAAGACGGAGACCTCTACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
||
| CDS CCA 90 bp | GTGACTCCCACCAGGAAGTACTCATTAATGAGGTTAGACTTAGCCTaGTCCATGGCCCATCTGCTCCCTACATTCCAGCATTCTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTPTRKYSLMRLDLA*SMAHLLPTFQHSEL Trigger: CAGCTCAGAATGCTGGAATGTAGGGAGCAGATGGGCCATGGACCAGGCTAAGTCTAACCTCATTAATGAGTACTTCCTGGTGGGAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS-3UTR CAA 90 bp | CGAACTCTCAAGAATAACCTCAGATTTACTCAACAGCCAGATGCCTGCCTGGACCTTCGTGCCTTGCAATaGCCCTTTCTAGCTTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: RTLKNNLRFTQQPDACLDLRALQ*PFLASP Trigger: GGGCGAAGCTAGAAAGGGCAATTGCAAGGCACGAAG...GTCCAGGCAGGCATCTGGCTGTTGAGTAAATCTGAGGTTATTCTTGAGAGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS-3UTR CAA 90 bp | CGAACTCTCAAGAATAACCTCAGATTTACTCAACAGCCAGATGCCTGCCTGGACCTTCTTCATCCAGAGTaGCATCCTGCCGAGGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RTLKNNLRFTQQPDACLDLLHPE*HPAEGH Trigger: ATGGCCCTCGGCAGGATGCAACTCTGGATGAAGAAG...GTCCAGGCAGGCATCTGGCTGTTGAGTAAATCTGAGGTTATTCTTGAGAGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS-3UTR CAA 90 bp | CACAGCTCACTGATGGAGTCGCCATGTGCGGTCACCAATATGCCAGTGTTCAGGTCATCGAAGGTCTTTTaGTCTCCTTGTTTCCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HSSLMESPCAVTNMPVFRSSKVF*SPCFRL Trigger: GAGACGGAAACAAGGAGACAAAAAGACCTTCGATGA...CCTGAACACTGGCATATTGGTGACCGCACATGGCGACTCCATCAGTGAGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS-3UTR CAA 90 bp | AACATGGTATCTATTCTTTGCACACAGGTCGTAGGCTATATTGGTGAACGAGGTGCCAGCAGCTGCAACTaGGGCGGCATCATAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: NMVSILCTQVVGYIGERGASSCN*GGIIIL Trigger: CAGGATTATGATGCCGCCCAAGTTGCAGCTGCTGGC...ACCTCGTTCACCAATATAGCCTACGACCTGTGTGCAAAGAATAGATACCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| CDS-3UTR CAA 90 bp | CTGGCAACTTGGAGTTTTGAGGGTTTTGGATATTTAAATCCAATGCTCAGGAGGTTCGCGATAGTCTGCTaGGTGGGCAGCTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LATWSFEGFGYLNPMLRRFAIVC*VGSFFS Trigger: AGAGAAGAAGCTGCCCACCAAGCAGACTATCGCGAA...CCTCCTGAGCATTGGATTTAAATATCCAAAACCCTCAAAACTCCAAGTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS CCA 90 bp | GAATTTTGCAAAATCCAAGTAAGAGATGTGTCCGTGATAGAAGCCTaGCTTCATCTCGTTCCAGGTGGTTATGTTCTTCACAAAGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: EFCKIQVRDVSVIEA*LHLVPGGYVLHKAH Trigger: GTGCGCTTTGTGAAGAACATAACCACCTGGAACGAGATGAAGCCAGGCTTCTATCACGGACACATCTCTTACTTGGATTTTGCAAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS-3UTR CAA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGCTCGGACTTCGTGCCTaGCAATTGCCCTTTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRLGLRA*QLPFLA Trigger: AGCTAGAAAGGGCAATTGCAAGGCACGAAGTCCGAG...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS-3UTR CAA 90 bp | CACGAAGCAGAAGCATTTGAGTTCCTAAAACACAAGTTTCATAGAAGTCTTAGGCATGGTATCTATTCTTaGCACACAGGTCGTAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: HEAEAFEFLKHKFHRSLRHGIYS*HTGRRL Trigger: TAGCCTACGACCTGTGTGCAAAGAATAGATACCATG...CCTAAGACTTCTATGAAACTTGTGTTTTAGGAACTCAAATGCTTCTGCTTCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS GCA 72 bp | AGCATCGCCACCGCGAAGGCCACCACCGCCAGCAGCTaGAACTTGGGCGGCATCATAATCCTGAGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SIATAKATTASS*NLGGIIILRSP Trigger: GGGGCTCCTCAGGATTATGATGCCGCCCAAGTTGCAGCTGCTGGCGGTGGTGGCCTTCGCGGTGGCGATGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043325.9 ENSMUST00000160690.2 |
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| CDS CAA 72 bp | GGCGCTGTTCAATTTCTCGGACTTCGTGCCTTGCAATaGCCCTTTCTAGCTTCGCCCGGGACTCCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GAVQFLGLRALQ*PFLASPGTPPA Trigger: AGCTGGAGGAGTCCCGGGCGAAGCTAGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS TCA 72 bp | GGTCTCCGTCTTTCTCGCGGACAGCGTGAGCTCGGATaGACTGGAACTGCTCCAGAGCAAACTCATAGAACT | + |
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Preference number: 6 (lower is better) Translates to: GLRLSRGQRELG*TGTAPEQTHRT Trigger: AGTTCTATGAGTTTGCTCTGGAGCAGTTCCAGTTCATCCGAGCTCACGCTGTCCGCGAGAAAGACGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS GCA 72 bp | TCCATTGTATGGCGCTGTTCAATTTCTCGGACTTCGTaGCTTGCAATTGCCCTTTCTAGCTTCGCCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SIVWRCSISRTS*LAIALSSFARD Trigger: GTCCCGGGCGAAGCTAGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS CAA 72 bp | TTGTATGGCGCTGTTCAATTTCTCGGACTTCGTGCCTaGCAATTGCCCTTTCTAGCTTCGCCCGGGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LYGAVQFLGLRA*QLPFLASPGTP Trigger: AGGAGTCCCGGGCGAAGCTAGAAAGGGCAATTGCAAGGCACGAAGTCCGAGAAATTGAACAGCGCCATACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS GCA 72 bp | AAGGAAAGCCTGACTTCTGACTTACAGGTCATCTCCTaGCCATCTTCCCAGATTCCAGGGGTCCCACTCATT | + |
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Preference number: 6 (lower is better) Translates to: KESLTSDLQVIS*PSSQIPGVPLI Trigger: AATGAGTGGGACCCCTGGAATCTGGGAAGATGGGCAGGAGATGACCTGTAAGTCAGAAGTCAGGCTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160690.2 |
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| CDS CCA 72 bp | ACCAGGAAGTACTCATTAATGAGGTTAGACTTAGCCTaGTCCATGGCCCATCTGCTCCCTACATTCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TRKYSLMRLDLA*SMAHLLPTFQH Trigger: ATGCTGGAATGTAGGGAGCAGATGGGCCATGGACCAGGCTAAGTCTAACCTCATTAATGAGTACTTCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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| CDS CCA 72 bp | AAAATCCAAGTAAGAGATGTGTCCGTGATAGAAGCCTaGCTTCATCTCGTTCCAGGTGGTTATGTTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: KIQVRDVSVIEA*LHLVPGGYVLH Trigger: GTGAAGAACATAACCACCTGGAACGAGATGAAGCCAGGCTTCTATCACGGACACATCTCTTACTTGGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043325.9 |
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