Pregenerated sensors for HROB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034773Ensembl transcript IDs: ENSMUST00000100392.5, ENSMUST00000133930.8
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCCAGGCAGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTaGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KPGSPLSGPSLGISR*LWEASDHGLELSPV Trigger: CACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCTGCCTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 90 bp | ATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTaGACAACAGGCCTTAGGTCACCTCTGCTGTGGTTGTGGCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: ISEPGTAACTSQSPW*TTGLRSPLLWLWLL Trigger: AAGGAGCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 90 bp | TTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTaGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGTTGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: FISEPGTAACTSQSP*WTTGLRSPLLWLWL Trigger: GAGCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR GCA 90 bp | CAAATGAGGAAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTaGACCTCACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCT | + |
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Preference number: 1 (lower is better) Translates to: QMRKGRFISEPGTAA*TSQSPWWTTGLRSP Trigger: AGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTTCCTCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR TCA 90 bp | CTGCTGTGGTTGTGGCTCCTTTGGGCTCCTCAGCTGGCAGGGGATTaGGGAATAAAGGAACAAGGAAATCAAGTCCAGCCTCTTGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: LLWLWLLWAPQLAGD*GIKEQGNQVQPLES Trigger: ACTTTCAAGAGGCTGGACTTGATTTCCTTGTTCCTTTATTCCTCAATCCCCTGCCAGCTGAGGAGCCCAAAGGAGCCACAACCACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 90 bp | AGGAACAAGGAAATCAAGTCCAGCCTCTTGAAAGTTAGGATGGGGTaGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RNKEIKSSLLKVRMG*EDPTFLIGWRTMCQ Trigger: CTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAGGCTGGACTTGATTTCCTTGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCTAGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGGGGCCGTTCCAGAGCTaGCCAGATGGCCAAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: AALAAGLTEEVLRELTQEGPFQS*PDGQVG Trigger: ACCCACTTGGCCATCTGGCCAGCTCTGGAACGGCCC...CTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCTAGGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCACTGGCGTTCTCTCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGGTGGATGCCCTGTCTTaGGGCAGCCCTAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QCTGVLSQMHLACLGAERVDALS*GSPSCW Trigger: CCAGCAGCTAGGGCTGCCTCAAGACAGGGCATCCAC...CCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAGAGAACGCCAGTGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGTTGTGGCGAGGCTGCCAGCTCATaGTGGATGCCCTGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HSHPGGQQALGHLCCGCGEAASS*WMPCLE Trigger: CTCAAGACAGGGCATCCACCATGAGCTGGCAGCCTC...GCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGGCTGCCAGCTCATGGTaGATGCCCTGTCTTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVAASSW*MPCLEA Trigger: TGCCTCAAGACAGGGCATCCACCATGAGCTGGCAGC...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGGAGGCTGCCAGCTCATaGTGGATGCCCTGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LRSPSRSSLTSMQVSESEEAASS*WMPCLE Trigger: CTCAAGACAGGGCATCCACCATGAGCTGGCAGCCTC...CTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCCTAGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAATTTCAAGGTGGTTATaGGAGGCATCAGACCATGGG | + |
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Preference number: 2 (lower is better) Translates to: GSPSCWAHRRSPQGAHSGISRWL*EASDHG Trigger: CCCATGGTCTGATGCCTCCCATAACCACCTTGAAAT...TCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCTAGGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCGCTGCCAGCTCATGGTaGATGCCCTGTCTTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCAASSW*MPCLEA Trigger: TGCCTCAAGACAGGGCATCCACCATGAGCTGGCAGC...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR TCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGACATCCAGGTCATCTTTaGCCAGCATGCAGGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GWGGRIPLFLLAGGQCARHPGHL*PACRSL Trigger: CAGAGACCTGCATGCTGGTCAAAGATGACCTGGATG...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGTCCATCCATTTCCAGGATGCCCATaGCAAAAGAAGTCGTCGAGT | + |
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Preference number: 2 (lower is better) Translates to: SCWAHRRSPQGAHSGVHPFPGCP*QKKSSS Trigger: ACTCGACGACTTCTTTTGGCATGGGCATCCTGGAAA...TGGATGGACTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGATGCCCTTCCCACTTTTCTTATTaGCTGGAGGACAATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: MHLACLGAERLPAHGGCPSHFSY*LEDNVP Trigger: TGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGA...AGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCGGCCAGATGGCCAAGTaGGTGACTCCAGACCTATCT | + |
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Preference number: 2 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCGQMAK*VTPDLS Trigger: AGATAGGTCTGGAGTCACCCACTTGGCCATCTGGCC...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR TCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAAAAAGAAAAGGGAACTaGACAGGGCCGTTCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GWGGRIPLFLLAGGQCARKRKGN*TGPFQS Trigger: GCTCTGGAACGGCCCTGTTCAGTTCCCTTTTCTTTT...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGGCCAGATTTCCAGGATaGCCATGCCAAAAGAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVARFPG*PCQKKS Trigger: CGACTTCTTTTGGCATGGGCATCCTGGAAATCTGGC...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGGGCTGGAGGACAATGTaGCAGAGGGATAAGGATGTA | + |
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Preference number: 2 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVGWRTM*QRDKDV Trigger: TACATCCTTATCCCTCTGGCACATTGTCCTCCAGCC...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CAA 90 bp | AGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGGTCAGCTaGGTCTACAGAGCGAGTTTCAGGACAGCCAAGGCTACAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RSSLTSMQVSESEVS*VYRASFRTAKATEK Trigger: TTTCTCTGTAGCCTTGGCTGTCCTGAAACTCGCTCTGTAGACCAAGCTGACCTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR GCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGATTTCCAGGATGCCCATaGCAAAAGAAGTCGTCGAGT | + |
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Preference number: 2 (lower is better) Translates to: GWGGRIPLFLLAGGQCARFPGCP*QKKSSS Trigger: ACTCGACGACTTCTTTTGGCATGGGCATCCTGGAAA...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCACTAGGCATTTCAAGGTaGTTATGGGAGGCATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GISRWLWEASDHGLELSPLGISR*LWEASD Trigger: GTCTGATGCCTCCCATAACCACCTTGAAATGCCTAG...TGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGCAGCTGGCAGGGGATTaGGGAATAAAGGAACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLKVRMGWEDPTFLIGWRQLAGD*GIKEQG Trigger: TCCTTGTTCCTTTATTCCTCAATCCCCTGCCAGCTG...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCTAGGCATTTCAAGGTaGTTATGGGAGGCATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCLGISR*LWEASD Trigger: GTCTGATGCCTCCCATAACCACCTTGAAATGCCTAG...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACACAGCTGGCAGGGGATTaGGGAATAAAGGAACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTQLAGD*GIKEQG Trigger: TCCTTGTTCCTTTATTCCTCAATCCCCTGCCAGCTG...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGAGATGGCCAAGTGGGTaGCTCCAGACCTATCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: KVRMGWEDPTFLIGWRTMRWPSG*LQTYLV Trigger: TACAAGATAGGTCTGGAGTCACCCACTTGGCCATCT...CATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGGCCAGATTTCCAGGATaGCCATGCCAAAAGAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: KVRMGWEDPTFLIGWRTMARFPG*PCQKKS Trigger: CGACTTCTTTTGGCATGGGCATCCTGGAAATCTGGC...CATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCAAAGTTAGGATGGGGTaGGAGGATCCCACTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCKVRMG*EDPTFL Trigger: AAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTT...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | AGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTaGATGCCCTGTCTTGAGGCAGCCCTAGCTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLSGSREAASSW*MPCLEAALAAG Trigger: CCCAGCAGCTAGGGCTGCCTCAAGACAGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | CCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATaGTGGATGCCCTGTCTTGAGGCAGCCCTAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: PSLSGSREAASS*WMPCLEAALAA Trigger: AGCAGCTAGGGCTGCCTCAAGACAGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR TCA 72 bp | AGGGCCGTTCCAGAGCTGGCCAGATGGCCAAGTGGGTaGCTCCAGACCTATCTTGTAGAGGGCTTGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RAVPELARWPSG*LQTYLVEGLSP Trigger: GGGACTCAAGCCCTCTACAAGATAGGTCTGGAGTCACCCACTTGGCCATCTGGCCAGCTCTGGAACGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR GCA 72 bp | AGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTaGTGTGGTTGTGGCTCCTTTGGGCTCCTCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SHPGGQQALGHL*CGCGSFGLLSW Trigger: CCAGCTGAGGAGCCCAAAGGAGCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | GAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTaGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: EPGTAACTSQSP*WTTGLRSPLLW Trigger: CCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | GCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTaGCGTTCTCTCCCAGATGCACCTAGCTTGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ASDHGLELSPVH*RSLPDAPSLSG Trigger: CCCAGACAAGCTAGGTGCATCTGGGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | GAACAGGGCCGTTCCAGAGCTGGCCAGATGGCCAAGTaGGTGACTCCAGACCTATCTTGTAGAGGGCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: EQGRSRAGQMAK*VTPDLSCRGLE Trigger: CTCAAGCCCTCTACAAGATAGGTCTGGAGTCACCCACTTGGCCATCTGGCCAGCTCTGGAACGGCCCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCCCATGCCAAAAGAAGTCGTCGAGTCGTTAAGCCAGGCAGCCCACTGTCTGCCAGATGCACCTAGCTaGTCTGGGAGCAGAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: MPMPKEVVESLSQAAHCLPDAPS*SGSREA Trigger: AGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGG...CAGACAGTGGGCTGCCTGGCTTAACGACTCGACGACTTCTTTTGGCATGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | AGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTaGTTATGGGAGGCATCAGACCATGGGCTTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SPLSGPSLGISR*LWEASDHGLEL Trigger: CAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR GCA 72 bp | AAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTaGACCTCACAGTCACCCTGGTGGACAACAGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: KGRFISEPGTAA*TSQSPWWTTGL Trigger: AAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | CTGTCTGGCCCATCACTAGGCATTTCAAGGTGGTTATaGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LSGPSLGISRWL*EASDHGLELSP Trigger: TGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR GCA 72 bp | GAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTaGCAGAGGGATAAGGATGTAGGGGAGCAAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: EDPTFLIGWRTM*QRDKDVGEQAL Trigger: CAGGGCTTGCTCCCCTACATCCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR CCA 72 bp | AGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTaGAGGACAATGTGCCAGAGGGATAAGGATGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: RMGWEDPTFLIG*RTMCQRDKDVG Trigger: CCCTACATCCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CAA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGTCAGCTGGCAGGGGATaGAGGAATAAAGGAACAAGG | + |
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Preference number: 3 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVSAGRG*RNKGTR Trigger: CCTTGTTCCTTTATTCCTCAATCCCCTGCCAGCTGA...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCCATCCAGGTCATCTTaGACCAGCATGCAGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCPSRSS*TSMQVS Trigger: AGAGACCTGCATGCTGGTCAAAGATGACCTGGATGG...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
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| 3UTR TCA 72 bp | AGGAATAAAGGAACAAGGAAATCAAGTCCAGCCTCTTaGAAGTTAGGATGGGGTGGGAGGATCCCACTTTTC | + |
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Preference number: 3 (lower is better) Translates to: RNKGTRKSSPAS*KLGWGGRIPLF Trigger: GAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAGGCTGGACTTGATTTCCTTGTTCCTTTATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS-3UTR GCA 90 bp | CTCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGGCCCCGTGTGGGCTCTaGAGCCACATCAGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPDAPSLSGSREAASSWWAPCGL*SHIRLE Trigger: CTCCAGCCTGATGTGGCTGCAGAGCCCACACGGGGC...CCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS-3UTR TCA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCGAGCAGATTTCATGGTaGGCCAGGGCCCCTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSEQISW*ARAPAR Trigger: TCGGGCAGGGGCCCTGGCTCACCATGAAATCTGCTC...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCCTAGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGGTTCTGTGCTGTTCTaGGGCCCCGTGTGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPSCWAHRRSPQGAHSGGSVLF*GPVWAL Trigger: CAGAGCCCACACGGGGCCTCAGAACAGCACAGAACC...TCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCTAGGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCACTGGCGTTCTCTCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGGCCCCGTGTGGGCTCTaGAGCCACATCAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCTGVLSQMHLACLGAERAPCGL*SHIRLE Trigger: CTCCAGCCTGATGTGGCTGCAGAGCCCACACGGGGC...CCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAGAGAACGCCAGTGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCGGGCAAGGGCTGAGGTaGCTCGAGGAAGTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSGQGLR*LEEVPI Trigger: GATGGGGACTTCCTCGAGCCACCTCAGCCCTTGCCC...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGAGAGCAGATTTCATGGTaGGCCAGGGCCCCTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQMHLACLGAERLPAHGGEQISW*ARAPAR Trigger: TCGGGCAGGGGCCCTGGCTCACCATGAAATCTGCTC...TCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCCGTTCTCCCGCATGCTaGAGGGAGGGAGACACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSRSPAC*REGDTV Trigger: GACTGTGTCTCCCTCCCTCCAGCATGCGGGAGAACG...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGTTGTGGCAGGCAGAAGTCCTGCTaGGCCAGGAAAGCGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSHPGGQQALGHLCCGCGRQKSC*ARKAAG Trigger: ACCCGCCGCTTTCCTGGCCCAGCAGGACTTCTGCCT...GCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| 3UTR CAA 72 bp | CCAGTGCACTGGCGTTCTCTCCCAGATGCACCTAGCTaGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVHWRSLPDAPS*SGSREAASSWW Trigger: CCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAGAGAACGCCAGTGCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGTCCATCCAGGTGGCAGATACTGAGGTaGAGGAGCAGGGGAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGSQKKSSGSSLRSPSRWQILR*RSRGAP Trigger: AGGGGCTCCCCTGCTCCTGCACCTCAGTATCTGCCA...CCTGGATGGACTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGTTGTGGCTTGGCAGGCAGGATCTaGGTGGCTCCACTGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSHPGGQQALGHLCCGCGLAGRI*VAPLSA Trigger: AGCCGACAGTGGAGCCACCCAGATCCTGCCTGCCAA...GCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACGCTCTGGGAGACTaGAGTGGCTGGCCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRWLWEASDHGLELSPVHALGD*SGWPGP Trigger: TGGGCCGGGCCAGCCACTTCAGTCTCCCAGAGCGTG...CACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCAGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTGGTTATGGGAACGGGGTTTGCCACTTaGCCACGCTCTGGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ARQPTVWPITRHFKVVMGTGFAT*PRSGRL Trigger: CAGTCTCCCAGAGCGTGGTCAAGTGGCAAACCCCGT...TCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCTGCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAAAGAAGTCGTCGAGTCGTTAAGCCAGGCAGCCCACTGTCTGGCCCATGTGAGGCAGAAGTCCTaGTGGGCCAGGAAAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MPKEVVESLSQAAHCLAHVRQKS*WARKAA Trigger: CGCCGCTTTCCTGGCCCAGCAGGACTTCTGCCTCAC...ATGGGCCAGACAGTGGGCTGCCTGGCTTAACGACTCGACGACTTCTTTTGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCTAGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGAGTTTCCCAGATCCTTaGGCAAGGGCTGAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AALAAGLTEEVLRELTQESFPDP*ARAEVA Trigger: AGCCACCTCAGCCCTTGCCCAAGGATCTGGGAAACT...CTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCTAGGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGCACGCTCTGGGAGACTaGAGTGGCTGGCCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKVRMGWEDPTFLIGWRHALGD*SGWPGP Trigger: TGGGCCGGGCCAGCCACTTCAGTCTCCCAGAGCGTG...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGGAGGGGCGGGAGGGCTaGTGGGGTGTCCGGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLKVRMGWEDPTFLIGWREGREG*WGVRLV Trigger: TACCAACCGGACACCCCAGCAGCCCTCCCGCCCCTC...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCCTGACTGGTTGGAGGTaGGGTATGATGGCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGYGRHQTMGLSCLQCTGLTGWR*GMMALV Trigger: GACCAGTGCCATCATACCCCACCTCCAACCAGTCAG...GCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAAAGAAGTCGTCGAGTCGTTAAGCCAGGCAGCCCACTGTCTGGCCCATCGTTCTCCCGCATGCTaGAGGGAGGGAGACACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPKEVVESLSQAAHCLAHRSPAC*REGDTV Trigger: GACTGTGTCTCCCTCCCTCCAGCATGCGGGAGAACG...ATGGGCCAGACAGTGGGCTGCCTGGCTTAACGACTCGACGACTTCTTTTGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCTATAGAGAAAGCAGGTaGGGTCTCCCTCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGYGRHQTMGLSCLQCTGYRESR*GLPRPG Trigger: GCCTGGACGAGGGAGACCCCACCTGCTTTCTCTATA...GCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCCCCGTCATTCTTTGCTaGCTACTCAAGCTGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSPVILC*LLKLLL Trigger: TAGCAGCAGCTTGAGTAGTCAGCAAAGAATGACGGG...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGGGATAAGGGGTTCTGTGCTGTTCTaGGGCCCCGTGTGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRIPLFLLAGGQCARGIRGSVLF*GPVWAL Trigger: CAGAGCCCACACGGGGCCTCAGAACAGCACAGAACC...CCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGTCCATCCATCTGCCTCCTGCCTCTaGGAGCTCCTCTTCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCWAHRRSPQGAHSGVHPSASCL*ELLFWK Trigger: TTTCCAGAAGAGGAGCTCTCAGAGGCAGGAGGCAGA...TGGATGGACTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCTGGCAGATACTGAGGTaGAGGAGCAGGGGAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQGGYGRHQTMGLSCLQCWQILR*RSRGAP Trigger: AGGGGCTCCCCTGCTCCTGCACCTCAGTATCTGCCA...GCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCCATAATTCTGTGGGCTaGTTCGGATGGTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSHNSVG*FGWSFQ Trigger: CTGGAAGGACCATCCGAAGCAGCCCACAGAATTATG...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGAGTCTTGGGACTGACTaGTTGGAGGTGGGGTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPDAPSLSGSREAASSWWSLGTD*LEVGYD Trigger: ATCATACCCCACCTCCAACCAGTCAGTCCCAAGACT...CCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGAAAAGGGAACTGAACAGGGCCGTTCCAGAGCTGGCCAGATGGCCAAGTTTGGCAGGCAGGATCTaGGTGGCTCCACTGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKKRELNRAVPELARWPSLAGRI*VAPLSA Trigger: AGCCGACAGTGGAGCCACCCAGATCCTGCCTGCCAA...ACTTGGCCATCTGGCCAGCTCTGGAACGGCCCTGTTCAGTTCCCTTTTCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TGCACCTCACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGGGGGAGCCCCTTTGTTaGGAAGTGGAGACACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CTSQSPWWTTGLRSPLLWGEPLC*EVETHD Trigger: ATCATGTGTCTCCACTTCCCAACAAAGGGGCTCCCC...CCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGATCATCACCGCCATATTaGGGACCTTGTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQMHLACLGAERLPAHGGSSPPY*GPCSWG Trigger: TCCCCAGGAACAAGGTCCCCAATATGGCGGTGATGA...TCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCAGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTGGTTATGGGATCCGAGTCAGGGACTTaGTCATCACCGCCATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARQPTVWPITRHFKVVMGSESGT*SSPPYW Trigger: CCAATATGGCGGTGATGATCAAGTCCCTGACTCGGA...TCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCTGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGACAGGCAGGATCTGGGTaGCTCCACTGTCGGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GWGGRIPLFLLAGGQCARQAGSG*LHCRLL Trigger: TAGAAGCCGACAGTGGAGCCACCCAGATCCTGCCTG...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCGATCCTCACAGTGCTTaGCAGGCAGGATCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRFISEPGTAACTSQSPDPHSA*QAGSGW Trigger: CCACCCAGATCCTGCCTGCCAAGCACTGTGAGGATC...GGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGGATCCTCACAGTGCTTaGCAGGCAGGATCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPSRSSLTSMQVSESEDPHSA*QAGSGW Trigger: CCACCCAGATCCTGCCTGCCAAGCACTGTGAGGATC...CTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGAAGCTGGCTGAGTAACTaGGGTGGAAGTATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQMHLACLGAERLPAHGGSWLSN*GGSISG Trigger: CCCAGAAATACTTCCACCCCAGTTACTCAGCCAGCT...TCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGGGGCAAGGGCTGAGGTaGCTCGAGGAAGTCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLKVRMGWEDPTFLIGWRGQGLR*LEEVPI Trigger: GATGGGGACTTCCTCGAGCCACCTCAGCCCTTGCCC...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCACACAGTCTTGGGACTaGCTGGTTGGAGGTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGRFISEPGTAACTSQSPTQSWD*LVGGGV Trigger: TACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGT...GGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAAAGAAGTCGTCGAGTCGTTAAGCCAGGCAGCCCACTGTCTGGCCCATGGAAGTGGAGACACATaGTGTAGCTGGGACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MPKEVVESLSQAAHCLAHGSGDT*CSWDRK Trigger: CTTCCTGTCCCAGCTACATCATGTGTCTCCACTTCC...ATGGGCCAGACAGTGGGCTGCCTGGCTTAACGACTCGACGACTTCTTTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGCATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGGGGTGTGGAAACCATaGTCTCCTCCAGATTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GISRWLWEASDHGLELSPGVWKP*SPPDSP Trigger: GGGAGAATCTGGAGGAGATCATGGTTTCCACACCCC...TGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCGGGGTGTGGAAACCATaGTCTCCTCCAGATTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQGGYGRHQTMGLSCLQCGVWKP*SPPDSP Trigger: GGGAGAATCTGGAGGAGATCATGGTTTCCACACCCC...GCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAGTGAGGCAGAAGTCCTaGTGGGCCAGGAAAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTVRQKS*WARKAA Trigger: CGCCGCTTTCCTGGCCCAGCAGGACTTCTGCCTCAC...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGAAAAGGGAACTGAACAGGGCCGTTCCAGAGCTGGCCAGATGGCCAAGTCTCCTCTTCTGGAAATaGCACCGCTGGGTTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKKRELNRAVPELARWPSLLFWK*HRWVLC Trigger: GCACAGAACCCAGCGGTGGCATTTCCAGAAGAGGAG...ACTTGGCCATCTGGCCAGCTCTGGAACGGCCCTGTTCAGTTCCCTTTTCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGCTGACTGGTTGGAGGTaGGGTATGATGGCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVLTGWR*GMMALV Trigger: GACCAGTGCCATCATACCCCACCTCCAACCAGTCAG...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGGCAGGATCTGGGTaGCTCCACTGTCGGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCQAGSG*LHCRLL Trigger: TAGAAGCCGACAGTGGAGCCACCCAGATCCTGCCTG...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCTAGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGTCTCAAGGAAGGCCATaGATTTCTACAGTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AALAAGLTEEVLRELTQESQGRP*ISTVDH Trigger: ATGGTCCACTGTAGAAATCCATGGCCTTCCTTGAGA...CTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCTAGGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGATGCCCTACAAGCTGTACCAGGTaGTTGGTAACTACAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MHLACLGAERLPAHGGCPTSCTR*LVTTGV Trigger: GACACCTGTAGTTACCAACCACCTGGTACAGCTTGT...AGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGAACAAGCTGTACCAGGTaGTTGGTAACTACAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQMHLACLGAERLPAHGGTSCTR*LVTTGV Trigger: GACACCTGTAGTTACCAACCACCTGGTACAGCTTGT...TCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAAGGCAGAAGTCCTGCTaGGCCAGGAAAGCGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTRQKSC*ARKAAG Trigger: ACCCGCCGCTTTCCTGGCCCAGCAGGACTTCTGCCT...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCCATGCCAAAAGAAGTCGTCGAGTCGTTAAGCCAGGCAGCCCACTGTCTGGTAGCAATCTCAGTCTaGAATTTAGCCAGGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MPMPKEVVESLSQAAHCLVAISV*NLARAP Trigger: CGGGGCCCTGGCTAAATTCCAGACTGAGATTGCTAC...CAGACAGTGGGCTGCCTGGCTTAACGACTCGACGACTTCTTTTGGCATGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGGCAGCCACATCAGGCTaGAGGCTTCCATGGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPSRSSLTSMQVSESEAATSG*RLPWEF Trigger: AAACTCCCATGGAAGCCTCCAGCCTGATGTGGCTGC...CTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| 3UTR CAA 72 bp | TTGACCAGCATGCAGGTCTCTGAGTCTGAGGTCAGCTaGGTCTACAGAGCGAGTTTCAGGACAGCCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSMQVSESEVS*VYRASFRTAKA Trigger: AGCCTTGGCTGTCCTGAAACTCGCTCTGTAGACCAAGCTGACCTCAGACTCAGAGACCTGCATGCTGGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGACACAGTCTTGGGACTaGCTGGTTGGAGGTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISRWLWEASDHGLELSPVTQSWD*LVGGGV Trigger: TACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGT...CACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGGGAAGTGGAGACACATaGTGTAGCTGGGACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPSRSSLTSMQVSESEGSGDT*CSWDRK Trigger: CTTCCTGTCCCAGCTACATCATGTGTCTCCACTTCC...CTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAACGGGGTTTGCCACTTaGCCACGCTCTGGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTTGFAT*PRSGRL Trigger: CAGTCTCCCAGAGCGTGGTCAAGTGGCAAACCCCGT...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGATCCGAGTCAGGGACTTaGTCATCACCGCCATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWGGRIPLFLLAGGQCARSESGT*SSPPYW Trigger: CCAATATGGCGGTGATGATCAAGTCCCTGACTCGGA...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGACTTCAAAGTCACCAATaGCCTGTTGATGGCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQMHLACLGAERLPAHGGLQSHQ*PVDGSQ Trigger: TTGAGAGCCATCAACAGGGCATTGGTGACTTTGAAG...TCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGGGATAAGGACAGGATCCTCACAGTaGTTGGCAGGCAGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRIPLFLLAGGQCARGIRTGSSQ*LAGRIW Trigger: CCAGATCCTGCCTGCCAAGCACTGTGAGGATCCTGT...CCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGCTCACTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTCATAATTCTGTGGGCTaGTTCGGATGGTCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLRSPSRSSLTSMQVSHNSVG*FGWSFQ Trigger: CTGGAAGGACCATCCGAAGCAGCCCACAGAATTATG...AGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAGTGAGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGTAGCAATCTCAGTCTaGAATTTAGCCAGGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GWGGRIPLFLLAGGQCARVAISV*NLARAP Trigger: CGGGGCCCTGGCTAAATTCCAGACTGAGATTGCTAC...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCAGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTGGTTATGGGATCTTCCACAGATCCCTaGGAACTGGTAGCAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARQPTVWPITRHFKVVMGSSTDP*ELVAIS Trigger: TGAGATTGCTACCAGTTCCCAGGGATCTGTGGAAGA...TCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCTGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTCATCACCGCCATATTaGGGACCTTGTTCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGRFISEPGTAACTSQSPSSPPY*GPCSWG Trigger: TCCCCAGGAACAAGGTCCCCAATATGGCGGTGATGA...GGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCTGTGGACTAGGTTGTTaGGTGTCACATTCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGYGRHQTMGLSCLQCTGCGLGC*VSHSGS Trigger: ACTACCTGAATGTGACACCCAACAACCTAGTCCACA...GCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGGCAGCCACATCAGGCTaGAGGCTTCCATGGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISRWLWEASDHGLELSPVAATSG*RLPWEF Trigger: AAACTCCCATGGAAGCCTCCAGCCTGATGTGGCTGC...CACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACTGGAAATGCCACCGCTaGGTTCTGTGCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDALFQNQVQQPAPHSHWKCHR*VLCCSE Trigger: CTCAGAACAGCACAGAACCCAGCGGTGGCATTTCCA...GTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGCCCGTCATTCTTTGCTaGCTACTCAAGCTGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRSPSRSSLTSMQVSESEPVILC*LLKLLL Trigger: TAGCAGCAGCTTGAGTAGTCAGCAAAGAATGACGGG...CTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGCTTGAGGATTGTGTCTaGACAGTCTCCTGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVLEDCV*TVSCGL Trigger: CAGACCACAGGAGACTGTGCAGACACAATCCTCAAG...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCCTTGAGGATTGTGTCTaGACAGTCTCCTGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGRFISEPGTAACTSQSPLEDCV*TVSCGL Trigger: CAGACCACAGGAGACTGTGCAGACACAATCCTCAAG...GGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGATGCCCTAGTGCACTAACAACGTaGTTCTCTGCATTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MHLACLGAERLPAHGGCPSALTT*FSAFSK Trigger: TTTGGAGAATGCAGAGAACCACGTTGTTAGTGCACT...AGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TGCACCTCACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGAGTGCACTAACAACGTaGTTCTCTGCATTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTSQSPWWTTGLRSPLLWSALTT*FSAFSK Trigger: TTTGGAGAATGCAGAGAACCACGTTGTTAGTGCACT...CCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTGAGGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACAGTCTTGGGACTGACTaGTTGGAGGTGGGGTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRDALFQNQVQQPAPHSHSLGTD*LEVGYD Trigger: ATCATACCCCACCTCCAACCAGTCAGTCCCAAGACT...GTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGGGATAAGGGGGGAGCCCCTTTGTTaGGAAGTGGAGACACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRIPLFLLAGGQCARGIRGEPLC*EVETHD Trigger: ATCATGTGTCTCCACTTCCCAACAAAGGGGCTCCCC...CCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGTATAGAGAAAGCAGGTaGGGTCTCCCTCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKVRMGWEDPTFLIGWRYRESR*GLPRPG Trigger: GCCTGGACGAGGGAGACCCCACCTGCTTTCTCTATA...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGGGATAAGGGGCCTCAGCTCACTCTaGTGTGTCTCTAGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GRIPLFLLAGGQCARGIRGLSSL*CVSRST Trigger: AGTGCTTCTAGAGACACACCAGAGTGAGCTGAGGCC...CCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGAAAACACTCCAATCTaGTTCAGCAACAGCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWGGRIPLFLLAGGQCARENTPI*FSNSTE Trigger: CTCGGTGCTGTTGCTGAAGCAGATTGGAGTGTTTTC...TCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGCTCCTCTTCTGGAAATaGCACCGCTGGGTTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVRMGWEDPTFLIGWRTMLLFWK*HRWVLC Trigger: GCACAGAACCCAGCGGTGGCATTTCCAGAAGAGGAG...CATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAAGTTTCCCAGATCCTTaGGCAAGGGCTGAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTSFPDP*ARAEVA Trigger: AGCCACCTCAGCCCTTGCCCAAGGATCTGGGAAACT...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCGAAAACACTCCAATCTaGTTCAGCAACAGCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRMGWEDPTFLIGWRTMCENTPI*FSNSTE Trigger: CTCGGTGCTGTTGCTGAAGCAGATTGGAGTGTTTTC...GCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACATTGGGACTGACTGGTTaGAGGTGGGGTATGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTLGLTG*RWGMMA Trigger: TGCCATCATACCCCACCTCCAACCAGTCAGTCCCAA...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAGGCCTCAGCTCACTCTaGTGTGTCTCTAGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTGLSSL*CVSRST Trigger: AGTGCTTCTAGAGACACACCAGAGTGAGCTGAGGCC...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCTGTGGACTAGGTTGTTaGGTGTCACATTCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQGGYGRHQTMGLSCLQCCGLGC*VSHSGS Trigger: ACTACCTGAATGTGACACCCAACAACCTAGTCCACA...GCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| 3UTR CAA 72 bp | AAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATaGGCTGGAGGACAATGTGCCAGAGGGATAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLGWGGRIPLFL*AGGQCARGIRM Trigger: CATCCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGGGATAAGGTCTCAAGGAAGGCCATaGATTTCTACAGTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRIPLFLLAGGQCARGIRSQGRP*ISTVDH Trigger: ATGGTCCACTGTAGAAATCCATGGCCTTCCTTGAGA...CCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAAGCTGGCTGAGTAACTaGGGTGGAAGTATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKVRMGWEDPTFLIGWRTSWLSN*GGSISG Trigger: CCCAGAAATACTTCCACCCCAGTTACTCAGCCAGCT...TGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACTCACCAATGCCCTGTTaGTGGCTCTCAAAAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: GRDALFQNQVQQPAPHSHSPMPC*WLSKIY Trigger: ATATATTTTTGAGAGCCATCAACAGGGCATTGGTGA...GTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGTCCCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCCAGAGGGATAAGGTTGTCAAGGTCATCTTaGTCAGGTGCTTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRIPLFLLAGGQCARGIRLSRSS*SGASKS Trigger: TGACTTTGAAGCACCTGATCAAGATGACCTTGACAA...CCTTATCCCTCTGGCACATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGCTTCAAAGTCACCAATaGCCTGTTGATGGCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKVRMGWEDPTFLIGWRLQSHQ*PVDGSQ Trigger: TTGAGAGCCATCAACAGGGCATTGGTGACTTTGAAG...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTCTTCCACAGATCCCTaGGAACTGGTAGCAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVRMGWEDPTFLIGWRTMSSTDP*ELVAIS Trigger: TGAGATTGCTACCAGTTCCCAGGGATCTGTGGAAGA...CATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 90 bp | AGCAGGTGGGGTCTCCCTCGTCCAGGCCCAGAGCAGATTTCATGGTaGGCCAGGGCCCCTGCCCGAAATCCTCTTCCACAGATCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRWGLPRPGPEQISW*ARAPARNPLPQIPG Trigger: CCCAGGGATCTGTGGAAGAGGATTTCGGGCAGGGGCCCTGGCTCACCATGAAATCTGCTCTGGGCCTGGACGAGGGAGACCCCACCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS GCA 90 bp | CCCTCGTCCAGGCCCAGAGCAGATTTCATGGTGAGCCAGGGCCCCTaGCCGAAATCCTCTTCCACAGATCCCTGGGAACTGGTAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PSSRPRADFMVSQGP*PKSSSTDPWELVAI Trigger: GATTGCTACCAGTTCCCAGGGATCTGTGGAAGAGGATTTCGGGCAGGGGCCCTGGCTCACCATGAAATCTGCTCTGGGCCTGGACGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 90 bp | CGGCCCATAATTCTGTGGGCTGCTTCGGATGGTCCTTCCAGCCACTaGCAGATACTGAGGTGCAGGAGCAGGGGAGCCCCTTTGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPIILWAASDGPSSH*QILRCRSRGAPLLG Trigger: TCCCAACAAAGGGGCTCCCCTGCTCCTGCACCTCAGTATCTGCCAGTGGCTGGAAGGACCATCCGAAGCAGCCCACAGAATTATGGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCCTTGGGACTGACTGGTaGGAGGTGGGGTATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSLGTDW*EVGYDG Trigger: GCCATCATACCCCACCTCCAACCAGTCAGTCCCAAG...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCACTGGCGTTCTCTCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGGGATCCTCACAGTGCTaGGCAGGCAGGATCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QCTGVLSQMHLACLGAERGSSQC*AGRIWV Trigger: CACCCAGATCCTGCCTGCCAAGCACTGTGAGGATCC...CCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAGAGAACGCCAGTGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCCTAGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGATGCTGGGGTGTCCGGTaGGTAGCAGTGACAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSPSCWAHRRSPQGAHSGCWGVR*VAVTSC Trigger: ACAGCTTGTCACTGCTACCAACCGGACACCCCAGCA...TCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCTAGGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS TCA 90 bp | TTCTGTGGGCTGCTTCGGATGGTCCTTCCAGCCACTGGCAGATACTaGGGTGCAGGAGCAGGGGAGCCCCTTTGTTGGGAAGTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FCGLLRMVLPATGRY*GAGAGEPLCWEVET Trigger: TGTCTCCACTTCCCAACAAAGGGGCTCCCCTGCTCCTGCACCTCAGTATCTGCCAGTGGCTGGAAGGACCATCCGAAGCAGCCCACAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 90 bp | ATGGTGAGCCAGGGCCCCTGCCCGAAATCCTCTTCCACAGATCCCTaGGAACTGGTAGCAATCTCAGTCTGGAATTTAGCCAGGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MVSQGPCPKSSSTDP*ELVAISVWNLARAP Trigger: CGGGGCCCTGGCTAAATTCCAGACTGAGATTGCTACCAGTTCCCAGGGATCTGTGGAAGAGGATTTCGGGCAGGGGCCCTGGCTCACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCACTGGCGTTCTCTCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCCTCGAACTCCATGCTaGCCAGGGCCTTGTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QCTGVLSQMHLACLGAERPRTPC*PGPCQG Trigger: ACCTTGACAAGGCCCTGGCAAGCATGGAGTTCGAGG...CCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGAGAGAACGCCAGTGCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | ATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGATGCCCTCCTCGAACTCCATGCTaGCCAGGGCCTTGTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MHLACLGAERLPAHGGCPPRTPC*PGPCQG Trigger: ACCTTGACAAGGCCCTGGCAAGCATGGAGTTCGAGG...AGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCAGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTGGTTATGGGAGGATCCTCACAGTGCTaGGCAGGCAGGATCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARQPTVWPITRHFKVVMGGSSQC*AGRIWV Trigger: CACCCAGATCCTGCCTGCCAAGCACTGTGAGGATCC...TCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCTGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGACCACACTGGCATCCATaGTGCTCCGAGTCAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SQMHLACLGAERLPAHGGPHWHP*CSESGT Trigger: AGTCCCTGACTCGGAGCACAATGGATGCCAGTGTGG...TCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCATCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 90 bp | ATGGCACTGGTCTTGAGGATTGTGTCTGCACAGTCTCCTGTGGTCTaGAAGAGACAGGTCTCAGGCACCCAGCATCCCTGGGCAGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MALVLRIVSAQSPVV*KRQVSGTQHPWAVH Trigger: GTGCACTGCCCAGGGATGCTGGGTGCCTGAGACCTGTCTCTTCCAGACCACAGGAGACTGTGCAGACACAATCCTCAAGACCAGTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTCACCCTGGTGGACAACAGGCCTTAGGTCACCTCTGCTGTGGTTGTGGCATCATCACCGCCATATaGGGGACCTTGTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSHPGGQQALGHLCCGCGIITAI*GTLFLG Trigger: CCCCAGGAACAAGGTCCCCAATATGGCGGTGATGAT...GCCACAACCACAGCAGAGGTGACCTAAGGCCTGTTGTCCACCAGGGTGACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS GCA 90 bp | GAGCCAGGCCTCAGCTCACTCTGGTGTGTCTCTAGAAGCACTCTGTaGACCGTTCCAAGCATCTCTCCCGTGGGGTCCTTAAACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: EPGLSSLWCVSRSTL*TVPSISPVGSLNTT Trigger: TGTGGTGTTTAAGGACCCCACGGGAGAGATGCTTGGAACGGTGCACAGAGTGCTTCTAGAGACACACCAGAGTGAGCTGAGGCCTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCAGTGCACTGGCGTTCTCTCCTGCTCCCGTCATTCTTaGCTGACTACTCAAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRHQTMGLSCLQCTGVLSCSRHS*LTTQAA Trigger: AGCAGCTTGAGTAGTCAGCAAAGAATGACGGGAGCA...GGAGAGAACGCCAGTGCACTGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | ATGCACCTAGCTTGTCTGGGAGCAGAGAGGCTGCCAGCTCATGGTGGATGCCCTCTACTCGGGCCTTTTTaGCCAACACAGGATCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: MHLACLGAERLPAHGGCPLLGPF*PTQDPH Trigger: GTGAGGATCCTGTGTTGGCAAAAAAGGCCCGAGTAG...AGGGCATCCACCATGAGCTGGCAGCCTCTCTGCTCCCAGACAAGCTAGGTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGCTGGGCTCACAGAAGAAGTCCTCAGGGAGCTCACTCAGGAGTCCATCCAATCATCACCGCCATATaGGGGACCTTGTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCWAHRRSPQGAHSGVHPIITAI*GTLFLG Trigger: CCCCAGGAACAAGGTCCCCAATATGGCGGTGATGAT...TGGATGGACTCCTGAGTGAGCTCCCTGAGGACTTCTTCTGTGAGCCCAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS GCA 90 bp | TGGTTGGAGGTGGGGTATGATGGCACTGGTCTTGAGGATTGTGTCTaGACAGTCTCCTGTGGTCTGGAAGAGACAGGTCTCAGGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: WLEVGYDGTGLEDCV*TVSCGLEETGLRHP Trigger: TGGGTGCCTGAGACCTGTCTCTTCCAGACCACAGGAGACTGTGCAGACACAATCCTCAAGACCAGTGCCATCATACCCCACCTCCAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS GCA 90 bp | CTCCACTGTCGGCTTCTAGCTCCAAGCCAGCTCCCTCGAACTCCATaGTTGCCAGGGCCTTGTCAAGGTCATCTTGATCAGGTGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHCRLLAPSQLPRTP*LPGPCQGHLDQVLQ Trigger: TTGAAGCACCTGATCAAGATGACCTTGACAAGGCCCTGGCAAGCATGGAGTTCGAGGGAGCTGGCTTGGAGCTAGAAGCCGACAGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 90 bp | CCAATCTGCTTCAGCAACAGCACCGAGCCAGGCCTCAGCTCACTCTaGTGTGTCTCTAGAAGCACTCTGTGCACCGTTCCAAGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PICFSNSTEPGLSSL*CVSRSTLCTVPSIS Trigger: AGAGATGCTTGGAACGGTGCACAGAGTGCTTCTAGAGACACACCAGAGTGAGCTGAGGCCTGGCTCGGTGCTGTTGCTGAAGCAGATTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGAGTCCATCCAGGTCATCTTTGACCAGCATGCAGGTCTCTGAGTCTGAGCTTGGGACTGACTGGTaGGAGGTGGGGTATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSPSRSSLTSMQVSESELGTDW*EVGYDG Trigger: GCCATCATACCCCACCTCCAACCAGTCAGTCCCAAG...CTCAGACTCAGAGACCTGCATGCTGGTCAAAGATGACCTGGATGGACTCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCATGCTGGGGTGTCCGGTaGGTAGCAGTGACAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GISRWLWEASDHGLELSPCWGVR*VAVTSC Trigger: ACAGCTTGTCACTGCTACCAACCGGACACCCCAGCA...TGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCAGCCCACTGTCTGGCCCATCACTAGGCATTTCAAGGTGGTTATGGGACTCCGAGTCAGGGACTaGATCATCACCGCCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: ARQPTVWPITRHFKVVMGLRVRD*IITAIL Trigger: CAATATGGCGGTGATGATCAAGTCCCTGACTCGGAG...TCCCATAACCACCTTGAAATGCCTAGTGATGGGCCAGACAGTGGGCTGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCACCACACTGGCATCCATaGTGCTCCGAGTCAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GISRWLWEASDHGLELSPPHWHP*CSESGT Trigger: AGTCCCTGACTCGGAGCACAATGGATGCCAGTGTGG...TGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 90 bp | GGGCCTGACGACTCTTGGAACACCTTTGCTCCCGTCATTCTTTGCTaGCTACTCAAGCTGCTGCTAGAAATGGAGGCAGGTCTCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPDDSWNTFAPVILC*LLKLLLEMEAGLRD Trigger: GTCCCTGAGACCTGCCTCCATTTCTAGCAGCAGCTTGAGTAGTCAGCAAAGAATGACGGGAGCAAAGGTGTTCCAAGAGTCGTCAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 90 bp | TGGGAACTGGTAGCAATCTCAGTCTGGAATTTAGCCAGGGCCCCGTaGGTCGGAGTCTGGGGTGTGGAAACCATGATCTCCTCCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: WELVAISVWNLARAP*VGVWGVETMISSRF Trigger: GAATCTGGAGGAGATCATGGTTTCCACACCCCAGACTCCGACTCACGGGGCCCTGGCTAAATTCCAGACTGAGATTGCTACCAGTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | ACGCTTTATTTCAGAACCAGGTACAGCAGCCTGCACCTCACAGTCACCCTGGTGCTACTCGGGCCTTTTTaGCCAACACAGGATCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLYFRTRYSSLHLTVTLVLLGPF*PTQDPH Trigger: GTGAGGATCCTGTGTTGGCAAAAAAGGCCCGAGTAG...CACCAGGGTGACTGTGAGGTGCAGGCTGCTGTACCTGGTTCTGAAATAAAGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCAAGGTGGTTATGGGAGGCATCAGACCATGGGCTTGAGCTGTCTCCACTCCGAGTCAGGGACTaGATCATCACCGCCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: GISRWLWEASDHGLELSPLRVRD*IITAIL Trigger: CAATATGGCGGTGATGATCAAGTCCCTGACTCGGAG...TGGAGACAGCTCAAGCCCATGGTCTGATGCCTCCCATAACCACCTTGAAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 90 bp | CCTGTGGCTGACGTAGGTCTCAAGGAAGGCCATGGATTTCTACAGTaGACCATAGGCTCCTTCCGTAACGATCCACTCAGATCAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: PVADVGLKEGHGFLQ*TIGSFRNDPLRSAT Trigger: AGTAGCTGATCTGAGTGGATCGTTACGGAAGGAGCCTATGGTCCACTGTAGAAATCCATGGCCTTCCTTGAGACCTACGTCAGCCACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGACAATGTGCTCCCGTCATTCTTaGCTGACTACTCAAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVRMGWEDPTFLIGWRTMCSRHS*LTTQAA Trigger: AGCAGCTTGAGTAGTCAGCAAAGAATGACGGGAGCA...CATTGTCCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTGAAAGTTAGGATGGGGTGGGAGGATCCCACTTTTCTTATTGGCTGGAGGCTTGTCAAGGTCATCTaGATCAGGTGCTTCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKVRMGWEDPTFLIGWRLVKVI*IRCFKV Trigger: GACTTTGAAGCACCTGATCAAGATGACCTTGACAAG...CCTCCAGCCAATAAGAAAAGTGGGATCCTCCCACCCCATCCTAACTTTCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 72 bp | CTGAGGCCCCGTGTGGGCTCTGCAGCCACATCAGGCTaGAGGCTTCCATGGGAGTTTCCCAGATCCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRPRVGSAATSG*RLPWEFPRSLG Trigger: GCCCAAGGATCTGGGAAACTCCCATGGAAGCCTCCAGCCTGATGTGGCTGCAGAGCCCACACGGGGCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CAA 72 bp | GGTCTCAGGGACATCACTCCTGTGCTGAGTGGAGCCTaGGCGTTCTCCCGCATGCTGGAGGGAGGGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLRDITPVLSGA*AFSRMLEGGRH Trigger: GTGTCTCCCTCCCTCCAGCATGCGGGAGAACGCCAAGGCTCCACTCAGCACAGGAGTGATGTCCCTGAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 72 bp | GGGACGTTGAGGTCCAGAAAAACGGGGTTTGCCACTTaGCCACGCTCTGGGAGACTGAAGTGGCTGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GTLRSRKTGFAT*PRSGRLKWLAR Trigger: CCGGGCCAGCCACTTCAGTCTCCCAGAGCGTGGTCAAGTGGCAAACCCCGTTTTTCTGGACCTCAACGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 72 bp | ACCATGATCTCCTCCAGATTCTCCCCGCTGTGTTGGTaGGGCAGAAGTCCTGCTGGGCCAGGAAAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TMISSRFSPLCW*GRSPAGPGKRR Trigger: CCGCCGCTTTCCTGGCCCAGCAGGACTTCTGCCTCACCAACACAGCGGGGAGAATCTGGAGGAGATCATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 72 bp | ATTCTGTGGGCTGCTTCGGATGGTCCTTCCAGCCACTaGCAGATACTGAGGTGCAGGAGCAGGGGAGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ILWAASDGPSSH*QILRCRSRGAP Trigger: AGGGGCTCCCCTGCTCCTGCACCTCAGTATCTGCCAGTGGCTGGAAGGACCATCCGAAGCAGCCCACAGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CAA 90 bp | GAGCCTTGGCGTTCTCCCGCATGCTGGAGGGAGGGAGACACAGTCTaGGGACTGACTGGTTGGAGGTGGGGTATGATGGCACTGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EPWRSPACWREGDTV*GLTGWRWGMMALVL Trigger: CAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGTCTCCCTCCCTCCAGCATGCGGGAGAACGCCAAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 72 bp | AAATGGAGGCAGGTCTCAGGGACATCACTCCTGTGCTaGGTGGAGCCTTGGCGTTCTCCCGCATGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KWRQVSGTSLLC*VEPWRSPACWR Trigger: CCTCCAGCATGCGGGAGAACGCCAAGGCTCCACTCAGCACAGGAGTGATGTCCCTGAGACCTGCCTCCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 72 bp | CTGCTTCGGATGGTCCTTCCAGCCACTGGCAGATACTaGGGTGCAGGAGCAGGGGAGCCCCTTTGTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRMVLPATGRY*GAGAGEPLCWE Trigger: TTCCCAACAAAGGGGCTCCCCTGCTCCTGCACCTCAGTATCTGCCAGTGGCTGGAAGGACCATCCGAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS GCA 72 bp | AGGCCCAGAGCAGATTTCATGGTGAGCCAGGGCCCCTaGCCGAAATCCTCTTCCACAGATCCCTGGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: RPRADFMVSQGP*PKSSSTDPWEL Trigger: CAGTTCCCAGGGATCTGTGGAAGAGGATTTCGGGCAGGGGCCCTGGCTCACCATGAAATCTGCTCTGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CAA 90 bp | TCCCGCATGCTGGAGGGAGGGAGACACAGTCTTGGGACTGACTGGTaGGAGGTGGGGTATGATGGCACTGGTCTTGAGGATTGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRMLEGGRHSLGTDW*EVGYDGTGLEDCVC Trigger: GCAGACACAATCCTCAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGTCTCCCTCCCTCCAGCATGCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 72 bp | TCACACAGGTGTCATGGCAGGTCTGCCTCCTGCCTCTaGGAGCTCCTCTTCTGGAAATGCCACCGCTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SHRCHGRSASCL*ELLFWKCHRWV Trigger: AACCCAGCGGTGGCATTTCCAGAAGAGGAGCTCTCAGAGGCAGGAGGCAGACCTGCCATGACACCTGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133930.8 |
||
| CDS GCA 72 bp | CAGATTCTCCCCGCTGTGTTGGTGAGGCAGAAGTCCTaGTGGGCCAGGAAAGCGGCGGGTTTTAGCTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QILPAVLVRQKS*WARKAAGFSSN Trigger: ATTCGAGCTAAAACCCGCCGCTTTCCTGGCCCAGCAGGACTTCTGCCTCACCAACACAGCGGGGAGAATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS TCA 72 bp | CTTCCATGGGAGTTTCCCAGATCCTTGGGCAAGGGCTaGGGTGGCTCGAGGAAGTCCCCATCTCCAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LPWEFPRSLGKG*GGSRKSPSPES Trigger: AGATTCTGGAGATGGGGACTTCCTCGAGCCACCTCAGCCCTTGCCCAAGGATCTGGGAAACTCCCATGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS GCA 72 bp | CGGCTTCTAGCTCCAAGCCAGCTCCCTCGAACTCCATaGTTGCCAGGGCCTTGTCAAGGTCATCTTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLAPSQLPRTP*LPGPCQGHLDQ Trigger: CTGATCAAGATGACCTTGACAAGGCCCTGGCAAGCATGGAGTTCGAGGGAGCTGGCTTGGAGCTAGAAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS GCA 72 bp | ATCACCGCCATATTGGGGACCTTGTTCCTGGGGAGCTaGTTGAGGGCCGCCTTGCGTAGCACCATGACAATA | + |
|
Preference number: 6 (lower is better) Translates to: ITAILGTLFLGS*LRAALRSTMTI Trigger: TATTGTCATGGTGCTACGCAAGGCGGCCCTCAAGCAGCTCCCCAGGAACAAGGTCCCCAATATGGCGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 72 bp | ATGCTGGAGGGAGGGAGACACAGTCTTGGGACTGACTaGTTGGAGGTGGGGTATGATGGCACTGGTCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: MLEGGRHSLGTD*LEVGYDGTGLE Trigger: CTCAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGTCTCCCTCCCTCCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
||
| CDS CCA 72 bp | TTCAGCAACAGCACCGAGCCAGGCCTCAGCTCACTCTaGTGTGTCTCTAGAAGCACTCTGTGCACCGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSNSTEPGLSSL*CVSRSTLCTVP Trigger: TGGAACGGTGCACAGAGTGCTTCTAGAGACACACCAGAGTGAGCTGAGGCCTGGCTCGGTGCTGTTGCTGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 72 bp | CTGGAGGGAGGGAGACACAGTCTTGGGACTGACTGGTaGGAGGTGGGGTATGATGGCACTGGTCTTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LEGGRHSLGTDW*EVGYDGTGLED Trigger: ATCCTCAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGTCTCCCTCCCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 90 bp | GCTCCTTCCGTAACGATCCACTCAGATCAGCTACTCGGGCCTTTTTaGCCAACACAGGATCCTCACAGTGCTTGGCAGGCAGGATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: APSVTIHSDQLLGPF*PTQDPHSAWQAGSG Trigger: CCCAGATCCTGCCTGCCAAGCACTGTGAGGATCCTGTGTTGGCAAAAAAGGCCCGAGTAGCTGATCTGAGTGGATCGTTACGGAAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS TCA 72 bp | GTAGCAATCTCAGTCTGGAATTTAGCCAGGGCCCCGTaGGTCGGAGTCTGGGGTGTGGAAACCATGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: VAISVWNLARAP*VGVWGVETMIS Trigger: GGAGATCATGGTTTCCACACCCCAGACTCCGACTCACGGGGCCCTGGCTAAATTCCAGACTGAGATTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS TCA 72 bp | CCACACTGGCATCCATTGTGCTCCGAGTCAGGGACTTaGTCATCACCGCCATATTGGGGACCTTGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PHWHPLCSESGT*SSPPYWGPCSW Trigger: CCAGGAACAAGGTCCCCAATATGGCGGTGATGATCAAGTCCCTGACTCGGAGCACAATGGATGCCAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS GCA 72 bp | AGAGACAGGTCTCAGGCACCCAGCATCCCTGGGCAGTaGACTAACAACGTGGTTCTCTGCATTCTCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RDRSQAPSIPGQ*TNNVVLCILQS Trigger: GCTTTGGAGAATGCAGAGAACCACGTTGTTAGTGCACTGCCCAGGGATGCTGGGTGCCTGAGACCTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CCA 72 bp | TGGAGGGAGGGAGACACAGTCTTGGGACTGACTGGTTaGAGGTGGGGTATGATGGCACTGGTCTTGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: WREGDTVLGLTG*RWGMMALVLRI Trigger: AATCCTCAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGTCTCCCTCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CCA 72 bp | CTCTCAAAAATATATCCAGAGTGTGCGGCTGAGGGCTaGGGGCCTGACGACTCTTGGAACACCTTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSKIYPECAAEG*GPDDSWNTFAP Trigger: GGGAGCAAAGGTGTTCCAAGAGTCGTCAGGCCCCCAGCCCTCAGCCGCACACTCTGGATATATTTTTGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CCA 72 bp | CAGGGCCCCTGCCCGAAATCCTCTTCCACAGATCCCTaGGAACTGGTAGCAATCTCAGTCTGGAATTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: QGPCPKSSSTDP*ELVAISVWNLA Trigger: GGCTAAATTCCAGACTGAGATTGCTACCAGTTCCCAGGGATCTGTGGAAGAGGATTTCGGGCAGGGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 90 bp | GTCTTGGGACTGACTGGTTGGAGGTGGGGTATGATGGCACTGGTCTaGAGGATTGTGTCTGCACAGTCTCCTGTGGTCTGGAAGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: VLGLTGWRWGMMALV*RIVSAQSPVVWKRQ Trigger: CTGTCTCTTCCAGACCACAGGAGACTGTGCAGACACAATCCTCAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 90 bp | TCCTTAAACACCACACTGGCATCCATTGTGCTCCGAGTCAGGGACTaGATCATCACCGCCATATTGGGGACCTTGTTCCTGGGGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLNTTLASIVLRVRD*IITAILGTLFLGSC Trigger: GCAGCTCCCCAGGAACAAGGTCCCCAATATGGCGGTGATGATCAAGTCCCTGACTCGGAGCACAATGGATGCCAGTGTGGTGTTTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS GCA 72 bp | GTGGGGTATGATGGCACTGGTCTTGAGGATTGTGTCTaGACAGTCTCCTGTGGTCTGGAAGAGACAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VGYDGTGLEDCV*TVSCGLEETGL Trigger: GAGACCTGTCTCTTCCAGACCACAGGAGACTGTGCAGACACAATCCTCAAGACCAGTGCCATCATACCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CCA 72 bp | GAGGGAGACACAGTCTTGGGACTGACTGGTTGGAGGTaGGGTATGATGGCACTGGTCTTGAGGATTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: EGDTVLGLTGWR*GMMALVLRIVS Trigger: AGACACAATCCTCAAGACCAGTGCCATCATACCCCACCTCCAACCAGTCAGTCCCAAGACTGTGTCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 72 bp | ACCACACTGGCATCCATTGTGCTCCGAGTCAGGGACTaGATCATCACCGCCATATTGGGGACCTTGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TTLASIVLRVRD*IITAILGTLFL Trigger: CAGGAACAAGGTCCCCAATATGGCGGTGATGATCAAGTCCCTGACTCGGAGCACAATGGATGCCAGTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 90 bp | AGCTCCCTCGAACTCCATGCTTGCCAGGGCCTTGTCAAGGTCATCTaGATCAGGTGCTTCAAAGTCACCAATGCCCTGTTGATGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSLELHACQGLVKVI*IRCFKVTNALLMAL Trigger: GAGAGCCATCAACAGGGCATTGGTGACTTTGAAGCACCTGATCAAGATGACCTTGACAAGGCCCTGGCAAGCATGGAGTTCGAGGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS GCA 72 bp | GCTTGCCAGGGCCTTGTCAAGGTCATCTTGATCAGGTaGTTCAAAGTCACCAATGCCCTGTTGATGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ACQGLVKVILIR*FKVTNALLMAL Trigger: GAGAGCCATCAACAGGGCATTGGTGACTTTGAAGCACCTGATCAAGATGACCTTGACAAGGCCCTGGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CCA 72 bp | GGTAACTACAGGTGTCTGAAGAGCTGGCTGAGTAACTaGGGTGGAAGTATTTCTGGGGGTGCTGACAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GNYRCLKSWLSN*GGSISGGADRR Trigger: TCTCCTGTCAGCACCCCCAGAAATACTTCCACCCCAGTTACTCAGCCAGCTCTTCAGACACCTGTAGTTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS CAA 72 bp | GAACTCCATGCTTGCCAGGGCCTTGTCAAGGTCATCTaGATCAGGTGCTTCAAAGTCACCAATGCCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ELHACQGLVKVI*IRCFKVTNALL Trigger: CAACAGGGCATTGGTGACTTTGAAGCACCTGATCAAGATGACCTTGACAAGGCCCTGGCAAGCATGGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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| CDS TCA 72 bp | GACTCTTGGAACACCTTTGCTCCCGTCATTCTTTGCTaGCTACTCAAGCTGCTGCTAGAAATGGAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DSWNTFAPVILC*LLKLLLEMEAG Trigger: ACCTGCCTCCATTTCTAGCAGCAGCTTGAGTAGTCAGCAAAGAATGACGGGAGCAAAGGTGTTCCAAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100392.5 ENSMUST00000133930.8 |
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