Pregenerated sensors for HRK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046607Ensembl transcript IDs: ENSMUST00000054836.7
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTTCCAGATCATTCTGGGACCCTCTACGTAATTCTGGTTGGGTaGGGGAGGGGCACGGCCTGCTGGCTGCTACTTCCCTGCCAGACA | + |
|
Preference number: 1 (lower is better) Translates to: WLPDHSGTLYVILVG*GRGTACWLLLPCQT Trigger: TGTCTGGCAGGGAAGTAGCAGCCAGCAGGCCGTGCCCCTCCCTCACCCAACCAGAATTACGTAGAGGGTCCCAGAATGATCTGGAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | CGGCCCAGTCCCCTCTACTCCACACCAGCATCTGTGCTGAACAGTTaGTCCACGCTGATCCCACCGGTCCATGTAAGTTTCCTGCATGGG | + |
|
Preference number: 1 (lower is better) Translates to: RPSPLYSTPASVLNS*STLIPPVHVSFLHG Trigger: CCCATGCAGGAAACTTACATGGACCGGTGGGATCAGCGTGGACCAACTGTTCAGCACAGATGCTGGTGTGGAGTAGAGGGGACTGGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | AGAAAAGAGCCTTTTGACAGCAGACTGAGGAGGTGTGCACTTTCCTaGTCACGCCCACTCTACTGGTCACGCCCAGCAGAGCTGGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: RKEPFDSRLRRCALS*SRPLYWSRPAELAR Trigger: CCTGGCCAGCTCTGCTGGGCGTGACCAGTAGAGTGGGCGTGACCAGGAAAGTGCACACCTCCTCAGTCTGCTGTCAAAAGGCTCTTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 90 bp | TGCCACCCTAGACATTACGAAGTCTCAGAGTTCACATCGCAAGGTTaGGCGTGTGGAAAGGAAAGGGACCACCACGTCCCCCGCAGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: CHPRHYEVSEFTSQG*ACGKERDHHVPRRH Trigger: ATGCCTGCGGGGGACGTGGTGGTCCCTTTCCTTTCCACACGCGCAACCTTGCGATGTGAACTCTGAGACTTCGTAATGTCTAGGGTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | CAGTTGGTCCACGCTGATCCCACCGGTCCATGTAAGTTTCCTGCATaGGCAGCGACAAGCATCTCTCTCCCCTGCCACCCTAGACATTAC | + |
|
Preference number: 1 (lower is better) Translates to: QLVHADPTGPCKFPA*AATSISLPCHPRHY Trigger: GTAATGTCTAGGGTGGCAGGGGAGAGAGATGCTTGTCGCTGCCCATGCAGGAAACTTACATGGACCGGTGGGATCAGCGTGGACCAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | GGTACTACCAATAACAATAGGATGGGAGTCTCTCCGGGGAAGCCTTaGAAAGCGCCTTGTGCAGTGTTCAGTGGCTGTGCTCCTGCGGGG | + |
|
Preference number: 1 (lower is better) Translates to: GTTNNNRMGVSPGKP*KAPCAVFSGCAPAG Trigger: CCCCGCAGGAGCACAGCCACTGAACACTGCACAAGGCGCTTTCCAAGGCTTCCCCGGAGAGACTCCCATCCTATTGTTATTGGTAGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 90 bp | CTCACCCTTGCACTGGGTCTCTCCAGGGTCAGCATGTCCCCACTGTaGTCTGGACAGTGTGTCTTTAAAGAGGCTGACACCACCAAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: LTLALGLSRVSMSPL*SGQCVFKEADTTKS Trigger: GGACTTGGTGGTGTCAGCCTCTTTAAAGACACACTGTCCAGATCACAGTGGGGACATGCTGACCCTGGAGAGACCCAGTGCAAGGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 90 bp | CAGACAGAATGTTCCCCCAAGTTACTGCCTCCCCCAGGCTCCAAATaGCCTCACCGCCATCTTTACCATGCTTACGGGCTCTTTGACTCT | + |
|
Preference number: 1 (lower is better) Translates to: QTECSPKLLPPPGSK*PHRHLYHAYGLFDS Trigger: AGAGTCAAAGAGCCCGTAAGCATGGTAAAGATGGCGGTGAGGGCATTTGGAGCCTGGGGGAGGCAGTAACTTGGGGGAACATTCTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | AGGAAATGGACGAAATACAAGCAGAGGGTGGCTTCCAGATCATTCTaGGACCCTCTACGTAATTCTGGTTGGGTGAGGGAGGGGCACGGC | + |
|
Preference number: 1 (lower is better) Translates to: RKWTKYKQRVASRSF*DPLRNSGWVREGHG Trigger: GCCGTGCCCCTCCCTCACCCAACCAGAATTACGTAGAGGGTCCCAGAATGATCTGGAAGCCACCCTCTGCTTGTATTTCGTCCATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 90 bp | GGCCCATGCCAGGAATCGGGAGATGGAGTTCAGGGGTATATCCTCTaGTGTATAGTGAGTTCAAGGTCAGCCTGGCTCCGTGTCTCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: GPCQESGDGVQGYIL*CIVSSRSAWLRVSK Trigger: TTTTGAGACACGGAGCCAGGCTGACCTTGAACTCACTATACAGCAGAGGATATACCCCTGAACTCCATCTCCCGATTCCTGGCATGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 90 bp | GGGGCTTCCTCTGTCTGTGTTTCCACCATCAGCTCTTTACAATTCTaGTTCCTTCCACGCTCTGGGCTACTCCCTCAGGAAAACAGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: GASSVCVSTISSLQF*FLPRSGLLPQENRN Trigger: GTTCCTGTTTTCCTGAGGGAGTAGCCCAGAGCGTGGAAGGAAGCAGAATTGTAAAGAGCTGATGGTGGAAACACAGACAGAGGAAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 90 bp | CCATGTAAGTTTCCTGCATGGGCAGCGACAAGCATCTCTCTCCCCTaGCACCCTAGACATTACGAAGTCTCAGAGTTCACATCGCAAGGT | + |
|
Preference number: 1 (lower is better) Translates to: PCKFPAWAATSISLP*HPRHYEVSEFTSQG Trigger: ACCTTGCGATGTGAACTCTGAGACTTCGTAATGTCTAGGGTGGCAGGGGAGAGAGATGCTTGTCGCTGCCCATGCAGGAAACTTACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | TGTTTCCACCATCAGCTCTTTACAATTCTGCTTCCTTCCACGCTCTaGGCTACTCCCTCAGGAAAACAGGAACCAGCTTCCTCCAAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: CFHHQLFTILLPSTL*ATPSGKQEPASSKD Trigger: GTCCTTGGAGGAAGCTGGTTCCTGTTTTCCTGAGGGAGTAGCCCAGAGCGTGGAAGGAAGCAGAATTGTAAAGAGCTGATGGTGGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 90 bp | TGCTACTTCCCTGCCAGACAAGCTCGGCTCTTTATTTTTCTTTGCTaGGTTCAGTTCTGGCAGATAAAAGCAGGAGGCCTCAGCACTGAG | + |
|
Preference number: 1 (lower is better) Translates to: CYFPARQARLFIFLC*VQFWQIKAGGLSTE Trigger: CTCAGTGCTGAGGCCTCCTGCTTTTATCTGCCAGAACTGAACTCAGCAAAGAAAAATAAAGAGCCGAGCTTGTCTGGCAGGGAAGTAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 90 bp | AGGCTTGGGGTCACAATGGTGACCTGGCAGATCTGTTCTAAATTATaGGCCAGACTGGAAAGGGACATTTCACGGCATCTGGTCTCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: RLGVTMVTWQICSKL*ARLERDISRHLVSK Trigger: TTTGGAGACCAGATGCCGTGAAATGTCCCTTTCCAGTCTGGCTCATAATTTAGAACAGATCTGCCAGGTCACCATTGTGACCCCAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | GGACTCATTTCTTTGCTAGGAAATGGACGAAATACAAGCAGAGGGTaGCTTCCAGATCATTCTGGGACCCTCTACGTAATTCTGGTTGGG | + |
|
Preference number: 1 (lower is better) Translates to: GLISLLGNGRNTSRG*LPDHSGTLYVILVG Trigger: CCCAACCAGAATTACGTAGAGGGTCCCAGAATGATCTGGAAGCCACCCTCTGCTTGTATTTCGTCCATTTCCTAGCAAAGAAATGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 90 bp | TCTGGAAATGTGAGGCGTGCAAGGACTCATTTCTTTGCTAGGAAATaGACGAAATACAAGCAGAGGGTGGCTTCCAGATCATTCTGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: SGNVRRARTHFFARK*TKYKQRVASRSFWD Trigger: GTCCCAGAATGATCTGGAAGCCACCCTCTGCTTGTATTTCGTCCATTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 90 bp | AAATACTATATAGCAATCTGCCAGCAAGGCTTGGGGTCACAATGGTaGCCTGGCAGATCTGTTCTAAATTATGAGCCAGACTGGAAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: KYYIAICQQGLGSQW*PGRSVLNYEPDWKG Trigger: CCCTTTCCAGTCTGGCTCATAATTTAGAACAGATCTGCCAGGTCACCATTGTGACCCCAAGCCTTGCTGGCAGATTGCTATATAGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 90 bp | GTCCCATTACCTCATGCAGTCCAAGTAACACCATGGCAGAGACAGTaGGACAATAAAGACACAGCCAGCATGCTTCAATATCCTAATACA | + |
|
Preference number: 1 (lower is better) Translates to: VPLPHAVQVTPWQRQ*DNKDTASMLQYPNT Trigger: TGTATTAGGATATTGAAGCATGCTGGCTGTGTCTTTATTGTCTCACTGTCTCTGCCATGGTGTTACTTGGACTGCATGAGGTAATGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCACGGCCTGCTGGCTGCTACTTCCCTGCCAGACAAGCTCGGCTCTTTATTTTGCTCGGTCCGGGCTaGGTCTCGGCTCCGGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GARPAGCYFPARQARLFILLGPG*VSAPVP Trigger: GGGGACCGGAGCCGAGACCCAGCCCGGACCGAGCAA...AATAAAGAGCCGAGCTTGTCTGGCAGGGAAGTAGCAGCCAGCAGGCCGTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTGGCAGATAGCCCCTCAGCTCATCACGCCCAGCAGAGCTaGCCAGGGACCGGTTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SESSQQLWAQVADSPSAHHAQQS*PGTGSP Trigger: TGGGGAACCGGTCCCTGGCCAGCTCTGCTGGGCGTG...ATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTGGCAGATAGCCCCTCAGCTCATGCCTGGGCGCCAGGGTaGGGCCTTGTCTCCACAATT | + |
|
Preference number: 2 (lower is better) Translates to: SESSQQLWAQVADSPSAHAWAPG*GLVSTI Trigger: AATTGTGGAGACAAGGCCTCACCCTGGCGCCCAGGC...ATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTGGCAGATAGCCCCTCAGCTCATCCCACCCCTCACCCTTaGACTGGGTCTCTCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SESSQQLWAQVADSPSAHPTPHP*TGSLQG Trigger: ACCCTGGAGAGACCCAGTGCAAGGGTGAGGGGTGGG...ATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTGGCAGATAGCCCCTCAGCTCATGTTTCGCCAACCTGTTaGTCGGTCCGGGCTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SESSQQLWAQVADSPSAHVSPTC*SVRAGS Trigger: AGACCCAGCCCGGACCGAGCAACAGGTTGGCGAAAC...ATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | AATGCCAGATACCGAGGCGGGAGGGAGGCTCATGAGCTGAGGTCAGCCTGGGCGGCAAGGTTGCGCGTGTaGAAAGGAAAGGGACCACCA | + |
|
Preference number: 2 (lower is better) Translates to: NARYRGGREAHELRSAWAARLRV*KGKGPP Trigger: TGGTGGTCCCTTTCCTTTCCACACGCGCAACCTTGC...CGCCCAGGCTGACCTCAGCTCATGAGCCTCCCTCCCGCCTCGGTATCTGGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | GATCTGATACAACAGAGCGGGTACCACGTTGGCTTGGGGGTGGGTGGGGGAGCGTTGGAAAGCGCCTTGTaGAGTGTTCAGTGGCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: DLIQQSGYHVGLGVGGGALESAL*SVQWLC Trigger: GCACAGCCACTGAACACTGCACAAGGCGCTTTCCAA...CGCTCCCCCACCCACCCCCAAGCCAACGTGGTACCCGCTCTGTTGTATCAGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAATGCGTCTTGGCAGCCAGGGAAAGCAGGATAAAGGGAGTGATCATGCCAGCCGTAGCCCTCCCACTTaGTGGTGGTGGTGGGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SMRLGSQGKQDKGSDHASRSPPT*WWWWGC Trigger: GCAGCCCCACCACCACCACCAAGTGGGAGGGCTACG...GCTGGCATGATCACTCCCTTTATCCTGCTTTCCCTGGCTGCCAAGACGCATTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 90 bp | TCGGCCCAGTCCCCTCTACTCCACACCAGCATCTGTGCTGAACAGTaGGTCCACGCTGATCCCACCGGTCCATGTAAGTTTCCTGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: SAQSPLLHTSICAEQ*VHADPTGPCKFPAW Trigger: CCATGCAGGAAACTTACATGGACCGGTGGGATCAGCGTGGACCAACTGTTCAGCACAGATGCTGGTGTGGAGTAGAGGGGACTGGGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGAAATGGACGAAATACAAGCAGAGGGTGGCTTCCAGATCATTCTGGGACCAGCCCTCCCACTTGGTaGTGGTGGTGGGGCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGNGRNTSRGWLPDHSGTSPPTW*WWWGCS Trigger: GGAGCAGCCCCACCACCACCACCAAGTGGGAGGGCT...GGTCCCAGAATGATCTGGAAGCCACCCTCTGCTTGTATTTCGTCCATTTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GATCTGATACAACAGAGCGGGTACCACGTTGGCTTGGGGGTGGGTGGGGGAGCGAAAATCAATGCGTCTTaGCAGCCAGGGAAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DLIQQSGYHVGLGVGGGAKINAS*QPGKAG Trigger: TCCTGCTTTCCCTGGCTGCCAAGACGCATTGATTTT...CGCTCCCCCACCCACCCCCAAGCCAACGTGGTACCCGCTCTGTTGTATCAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 90 bp | TGGGGGAGCGGCACACAGACTCCCTTAGTTCAGCCACTTTGCCATTaGCATGCCCTCAGCTTCCTCGCCTGTAAAATGGGACCCATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: WGSGTQTPLVQPLCH*HALSFLACKMGPMV Trigger: TACCATGGGTCCCATTTTACAGGCGAGGAAGCTGAGGGCATGCAAATGGCAAAGTGGCTGAACTAAGGGAGTCTGTGTGCCGCTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GATCTGATACAACAGAGCGGGTACCACGTTGGCTTGGGGGTGGGTGGGGGAGCGAATTATGAGCCAGACTaGAAAGGGACATTTCACGGC | + |
|
Preference number: 2 (lower is better) Translates to: DLIQQSGYHVGLGVGGGANYEPD*KGTFHG Trigger: GCCGTGAAATGTCCCTTTCCAGTCTGGCTCATAATT...CGCTCCCCCACCCACCCCCAAGCCAACGTGGTACCCGCTCTGTTGTATCAGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 90 bp | GACATGAGCTCAGCTCTACAGAGTGTCATCAGGGCATTCAGGGTCTaGTTATCCTGTGACACTGGGCTTCAGTCACCACCACCACCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DMSSALQSVIRAFRV*LSCDTGLQSPPPPS Trigger: GGAGGGTGGTGGTGGTGACTGAAGCCCAGTGTCACAGGATAACAAGACCCTGAATGCCCTGATGACACTCTGTAGAGCTGAGCTCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCCGTGCCAGGACATGCTaGCTCCCCACCAGTTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSRARTC*LPTSSQ Trigger: CTGAGAACTGGTGGGGAGGCAGCATGTCCTGGCACG...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | CACATCTTCTCTGGAAATGTGAGGCGTGCAAGGACTCATTTCTTTGCTAGGAAAAGGGGCACGGCCTGCTaGCTGCTACTTCCCTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: HIFSGNVRRARTHFFARKRGTAC*LLLPCQ Trigger: CTGGCAGGGAAGTAGCAGCCAGCAGGCCGTGCCCCT...TTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGAGAAGATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAGCTTCCCGAAGGGAGTGGACCATCTCACAAAGGCTTCGGTCCCACAGACAATACAAGCAGAGGGTaGCTTCCAGATCATTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: EKLPEGSGPSHKGFGPTDNTSRG*LPDHSG Trigger: CCCAGAATGATCTGGAAGCCACCCTCTGCTTGTATT...GTCTGTGGGACCGAAGCCTTTGTGAGATGGTCCACTCCCTTCGGGAAGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAATGCGTCTTGGCAGCCAGGGAAAGCAGGATAAAGGGAGTGATCATGCCAGCCTTTTGACAGCAGACTaGGGAGGTGTGCACTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SMRLGSQGKQDKGSDHASLLTAD*GGVHFP Trigger: AGGAAAGTGCACACCTCCTCAGTCTGCTGTCAAAAG...GCTGGCATGATCACTCCCTTTATCCTGCTTTCCCTGGCTGCCAAGACGCATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCAAAATAAAAATAACCACCAGCCCTGAAGCGGTGAGCCGTTGCAGCCAAGGACATGTCAAGAAATaGAGGGATCCCAGGCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ESKIKITTSPEAVSRCSQGHVKK*RDPRLP Trigger: GGGCAGCCTGGGATCCCTCCATTTCTTGACATGTCC...TTGGCTGCAACGGCTCACCGCTTCAGGGCTGGTGGTTATTTTTATTTTGCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCAAAATAAAAATAACCACCAGCCCTGAAGCGGTGAGCCGTTGCAGCCAAGAAACCTCTCATCCCTaGCCTTCCCAGTCCGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ESKIKITTSPEAVSRCSQETSHP*PSQSVC Trigger: ACAGACGGACTGGGAAGGCCAGGGATGAGAGGTTTC...TTGGCTGCAACGGCTCACCGCTTCAGGGCTGGTGGTTATTTTTATTTTGCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCCTACGTAATTCTGGTTaGGTGAGGGAGGGGCACGGC | + |
|
Preference number: 2 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSLRNSG*VREGHG Trigger: GCCGTGCCCCTCCCTCACCCAACCAGAATTACGTAG...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAGCTTCCCGAAGGGAGTGGACCATCTCACAAAGGCTTCGGTCCCACAGACACCTGGCAAGTCATCTaGAAATCCAACCAGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: EKLPEGSGPSHKGFGPTDTWQVI*KSNQEK Trigger: TTTTTCCTGGTTGGATTTGCAGATGACTTGCCAGGT...GTCTGTGGGACCGAAGCCTTTGTGAGATGGTCCACTCCCTTCGGGAAGCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGACTCAGAATAGAAAATAGCATGAACCCAGAAGAGAGCCCTGTGTTCTGGCAGACTGAGGAGGTGTaGACTTTCCTGGTCACGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SRLRIENSMNPEESPVFWQTEEV*TFLVTP Trigger: GGGCGTGACCAGGAAAGTGCACACCTCCTCAGTCTG...CCAGAACACAGGGCTCTCTTCTGGGTTCATGCTATTTTCTATTCTGAGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCCAGGCTCCAAATGCCCTCACCGCCATCTTTACCATGCTTACGGGCTCTTTCCAAAAAGGACTGTTaGTGTACCATAACTGAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: SPRLQMPSPPSLPCLRALSKKDC*CTITES Trigger: CGACTCAGTTATGGTACAGCAACAGTCCTTTTTGGA...AAGAGCCCGTAAGCATGGTAAAGATGGCGGTGAGGGCATTTGGAGCCTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 90 bp | TGGCTGCTACTTCCCTGCCAGACAAGCTCGGCTCTTTATTTTTCTTaGCTGAGTTCAGTTCTGGCAGATAAAAGCAGGAGGCCTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: WLLLPCQTSSALYFS*LSSVLADKSRRPQH Trigger: GTGCTGAGGCCTCCTGCTTTTATCTGCCAGAACTGAACTCAGCAAAGAAAAATAAAGAGCCGAGCTTGTCTGGCAGGGAAGTAGCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | AAACCCGGGGCAATGGAGAAGCGCACTAAAATGAACTGTGTGCGTGCCAAGACCTGGAAATGTGAGGCGTaGAAGGACTCATTTCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: KPGAMEKRTKMNCVRAKTWKCEA*KDSFLC Trigger: GCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCA...GGTCTTGGCACGCACACAGTTCATTTTAGTGCGCTTCTCCATTGCCCCGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCATCCCTGTAGGAAATTaGGGGAGGCCACAGCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSIPVGN*GRPQQS Trigger: AGACTGCTGTGGCCTCCCCCAATTTCCTACAGGGAT...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCCAGGCTCCAAATGCCCTCACCGCCATCTTTACCATGCTTACGGGCTCTTATTCAGCCCAGAGAGTaGCATGCAGAAAATACTATA | + |
|
Preference number: 2 (lower is better) Translates to: SPRLQMPSPPSLPCLRALIQPRE*HAENTI Trigger: TATAGTATTTTCTGCATGCCACTCTCTGGGCTGAAT...AAGAGCCCGTAAGCATGGTAAAGATGGCGGTGAGGGCATTTGGAGCCTGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCTACAGAGGACTTGGCTaGAAAGTCCCATCAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSYRGLG*KVPSRR Trigger: CCTCCTTGATGGGACTTTTCAGCCAAGTCCTCTGTA...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCTTGGGGTCACAATGGTaGCCTGGCAGATCTGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSLGSQW*PGRSVL Trigger: TAGAACAGATCTGCCAGGTCACCATTGTGACCCCAA...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGACTCAGAATAGAAAATAGCATGAACCCAGAAGAGAGCCCTGTGTTCTGGGTGCACCTAACCAACTaGTGCTTTCTAGCAGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: SRLRIENSMNPEESPVFWVHLTN*CFLADP Trigger: AGGGTCTGCTAGAAAGCATCAGTTGGTTAGGTGCAC...CCAGAACACAGGGCTCTCTTCTGGGTTCATGCTATTTTCTATTCTGAGTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | CACATCTTCTCTGGAAATGTGAGGCGTGCAAGGACTCATTTCTTTGCTAGGAAAGAGAAAAGAGCCTTTTaGCAGCAGACTGAGGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HIFSGNVRRARTHFFARKEKRAF*QQTEEV Trigger: CACCTCCTCAGTCTGCTGTCAAAAGGCTCTTTTCTC...TTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGAGAAGATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTTTCCATTACTACAGGAGAGTATTTACAGAGGACTTGGCTGAAAAGTCCCAGAGAGCTGTCTCGATaGGGACAGAAAGAAGCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VVSITTGEYLQRTWLKSPRELSR*GQKEAR Trigger: CCTAGCTTCTTTCTGTCCCCATCGAGACAGCTCTCT...GGGACTTTTCAGCCAAGTCCTCTGTAAATACTCTCCTGTAGTAATGGAAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTTTCCATTACTACAGGAGAGTATTTACAGAGGACTTGGCTGAAAAGTCCCAGCTCTTTACAATTCTaGTTCCTTCCACGCTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VVSITTGEYLQRTWLKSPSSLQF*FLPRSG Trigger: CCCAGAGCGTGGAAGGAAGCAGAATTGTAAAGAGCT...GGGACTTTTCAGCCAAGTCCTCTGTAAATACTCTCCTGTAGTAATGGAAACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | CACATCTTCTCTGGAAATGTGAGGCGTGCAAGGACTCATTTCTTTGCTAGGAAAGCTTCCAGATCATTCTaGGACCCTCTACGTAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HIFSGNVRRARTHFFARKASRSF*DPLRNS Trigger: AGAATTACGTAGAGGGTCCCAGAATGATCTGGAAGC...TTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGAGAAGATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGACTCAGAATAGAAAATAGCATGAACCCAGAAGAGAGCCCTGTGTTCTGGACAGCTTCATTGAAATaGAAATCACCAGAGATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SRLRIENSMNPEESPVFWTASLK*KSPEMP Trigger: TGGCATCTCTGGTGATTTTCATTTCAATGAAGCTGT...CCAGAACACAGGGCTCTCTTCTGGGTTCATGCTATTTTCTATTCTGAGTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | GACAATAAAGACACAGCCAGCATGCTTCAATATCCTAATACAAATGTCCGTCAAAGCATCTCTCTCCCCTaGCACCCTAGACATTACGAA | + |
|
Preference number: 2 (lower is better) Translates to: DNKDTASMLQYPNTNVRQSISLP*HPRHYE Trigger: TTCGTAATGTCTAGGGTGGCAGGGGAGAGAGATGCT...TTGACGGACATTTGTATTAGGATATTGAAGCATGCTGGCTGTGTCTTTATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR GCA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCAAGACACAGCCAGCATaGTTCAATATCCTAATACAA | + |
|
Preference number: 2 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSKTQPA*FNILIQ Trigger: TTGTATTAGGATATTGAAGCATGCTGGCTGTGTCTT...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | GACAATAAAGACACAGCCAGCATGCTTCAATATCCTAATACAAATGTCCGTCAAGGCACACATCTTCTCTaGAAATGTGAGGCGTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: DNKDTASMLQYPNTNVRQGTHLL*KCEACK Trigger: CTTGCACGCCTCACATTTCCAGAGAAGATGTGTGCC...TTGACGGACATTTGTATTAGGATATTGAAGCATGCTGGCTGTGTCTTTATTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGACTCAGAATAGAAAATAGCATGAACCCAGAAGAGAGCCCTGTGTTCTGGGGCATAGATTTAAAGTaGAGAAAAGAGCCTTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SRLRIENSMNPEESPVFWGIDLK*RKEPFD Trigger: GTCAAAAGGCTCTTTTCTCCACTTTAAATCTATGCC...CCAGAACACAGGGCTCTCTTCTGGGTTCATGCTATTTTCTATTCTGAGTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | ATGCCAGATACCGAGGCGGGAGGGAGGCTCATGAGCTaGGGTCAGCCTGGGCGCCAGGGTGAGGCCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MPDTEAGGRLMS*GQPGRQGEALS Trigger: AGACAAGGCCTCACCCTGGCGCCCAGGCTGACCTCAGCTCATGAGCCTCCCTCCCGCCTCGGTATCTGGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | CTCCGGGGCTCACCCTCAGAGAGCAGCCAGCAGCTTTaGGCCCAGGTGGCAGATAGCCCCTCAGCTCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: LRGSPSESSQQL*AQVADSPSAHH Trigger: GTGATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGAGGGTGAGCCCCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGATACAACAGAGCGGGTACCACGTTGGCTTGGGGGTGGGTGGGGGAGCGGAGGGTCAGGGCTGCTaGGCTCTCTCAGTAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: DLIQQSGYHVGLGVGGGAEGQGC*ALSVTQ Trigger: CTGTGTTACTGAGAGAGCCAAGCAGCCCTGACCCTC...CGCTCCCCCACCCACCCCCAAGCCAACGTGGTACCCGCTCTGTTGTATCAGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | TTCTGGTTGGGTGAGGGAGGGGCACGGCCTGCTGGCTaGTACTTCCCTGCCAGACAAGCTCGGCTCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: FWLGEGGARPAG*YFPARQARLFI Trigger: AATAAAGAGCCGAGCTTGTCTGGCAGGGAAGTAGCAGCCAGCAGGCCGTGCCCCTCCCTCACCCAACCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | CGAAGTCTCAGAGTTCACATCGCAAGGTTGCGCGTGTaGAAAGGAAAGGGACCACCACGTCCCCCGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSLRVHIARLRV*KGKGPPRPPQA Trigger: TGCCTGCGGGGGACGTGGTGGTCCCTTTCCTTTCCACACGCGCAACCTTGCGATGTGAACTCTGAGACTTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | CACCCTCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTaGCAGATAGCCCCTCAGCTCATCACACAACCAACT | + |
|
Preference number: 3 (lower is better) Translates to: HPQRAASSFGPR*QIAPQLITQPT Trigger: AGTTGGTTGTGTGATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGAGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTGGCAGATAGCCCCTCAGCTCATAATCCCTGTAGGAAATaGGGGGAGGCCACAGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SESSQQLWAQVADSPSAHNPCRK*GEATAV Trigger: GACTGCTGTGGCCTCCCCCAATTTCCTACAGGGATT...ATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | GGGGCTTCTGAACCAGCTCCTATGAGAATAGTCTGCTaGCCCTCTCCCCAAATCTCCAGGCAGCCTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: GASEPAPMRIVC*PSPQISRQPLT Trigger: GGTCAGAGGCTGCCTGGAGATTTGGGGAGAGGGGCAGCAGACTATTCTCATAGGAGCTGGTTCAGAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | CCTTTTGACAGCAGACTGAGGAGGTGTGCACTTTCCTaGTCACGCCCACTCTACTGGTCACGCCCAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PFDSRLRRCALS*SRPLYWSRPAE Trigger: CTCTGCTGGGCGTGACCAGTAGAGTGGGCGTGACCAGGAAAGTGCACACCTCCTCAGTCTGCTGTCAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAATGCGTCTTGGCAGCCAGGGAAAGCAGGATAAAGGGAGTGATCATGCCAGCCACGTCCCCTCTGTCTaGTCCATCTTGCCTTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SMRLGSQGKQDKGSDHASHVPSV*SILPSA Trigger: GGCCGAAGGCAAGATGGACAAGACAGAGGGGACGTG...GCTGGCATGATCACTCCCTTTATCCTGCTTTCCCTGGCTGCCAAGACGCATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | AATGCCAGATACCGAGGCGGGAGGGAGGCTCATGAGCTGAGGTCAGCCTGGGCGTTTCCAGTGGCCATCTaGTCACCTAGCCCTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NARYRGGREAHELRSAWAFPVAI*SPSPLK Trigger: TTTTAAAGGGCTAGGTGACAAGATGGCCACTGGAAA...CGCCCAGGCTGACCTCAGCTCATGAGCCTCCCTCCCGCCTCGGTATCTGGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCAGGCTCCAAATGCCCTCACCGCCATCTTTACCATGCTTACGGGCTCTTCAGCCACTTTGCCATTaGCATGCCCTCAGCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPRLQMPSPPSLPCLRALQPLCH*HALSFL Trigger: GAGGAAGCTGAGGGCATGCAAATGGCAAAGTGGCTG...AAGAGCCCGTAAGCATGGTAAAGATGGCGGTGAGGGCATTTGGAGCCTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | GCACTGGGTCTCTCCAGGGTCAGCATGTCCCCACTGTaGTCTGGACAGTGTGTCTTTAAAGAGGCTGACACC | + |
|
Preference number: 3 (lower is better) Translates to: ALGLSRVSMSPL*SGQCVFKEADT Trigger: GGTGTCAGCCTCTTTAAAGACACACTGTCCAGATCACAGTGGGGACATGCTGACCCTGGAGAGACCCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | GGGAGCGGCACACAGACTCCCTTAGTTCAGCCACTTTaGCATTTGCATGCCCTCAGCTTCCTCGCCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSGTQTPLVQPL*HLHALSFLACK Trigger: TTTACAGGCGAGGAAGCTGAGGGCATGCAAATGGCAAAGTGGCTGAACTAAGGGAGTCTGTGTGCCGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | AGACATTACGAAGTCTCAGAGTTCACATCGCAAGGTTaGGCGTGTGGAAAGGAAAGGGACCACCACGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RHYEVSEFTSQG*ACGKERDHHVP Trigger: GGGGACGTGGTGGTCCCTTTCCTTTCCACACGCGCAACCTTGCGATGTGAACTCTGAGACTTCGTAATGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | GAAATTGGGGGAGGCCACAGCAGTCTCTCAAAGTACTaGTGCAAGGAGAGGAGGGACCTCCTTTTCCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EIGGGHSSLSKY*CKERRDLLFLS Trigger: GCTTAGGAAAAGGAGGTCCCTCCTCTCCTTGCAGCAGTACTTTGAGAGACTGCTGTGGCCTCCCCCAATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCAGGGAAAGCAGGATAAAGGGAGTGATCATGCCAGCGCTTCACACACTGGCTTATTCTGAGTGTTaGGGGACCATGGGAAATCGG | + |
|
Preference number: 3 (lower is better) Translates to: AARESRIKGVIMPALHTLAYSEC*GTMGNR Trigger: CCGATTTCCCATGGTCCCCAAACACTCAGAATAAGC...CAGTGTGTGAAGCGCTGGCATGATCACTCCCTTTATCCTGCTTTCCCTGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAGAGCAGCCAGCAGCTTTGGGCCCAGGTGGCAGATAGCCCCTCAGCTCATGTATTTACAGAGGACTaGGCTGAAAAGTCCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SESSQQLWAQVADSPSAHVFTED*AEKSHQ Trigger: TTGATGGGACTTTTCAGCCAAGTCCTCTGTAAATAC...ATGAGCTGAGGGGCTATCTGCCACCTGGGCCCAAAGCTGCTGGCTGCTCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | AAATCCTTCAGCCTGCCCTCAAGTGTCCCCCAAATAAGGCATTCTCTTTTCAGCCTCTCCGGGGAAGCCTaGGAAAGCGCCTTGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSFSLPSSVPQIRHSLFSLSGEA*ESALCS Trigger: ACTGCACAAGGCGCTTTCCAAGGCTTCCCCGGAGAG...GCTGAAAAGAGAATGCCTTATTTGGGGGACACTTGAGGGCAGGCTGAAGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | CTGTTTTTCAATGAGCCACACCAGAGCCACTTGATCTaGTACAACAGAGCGGGTACCACGTTGGCTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFFNEPHQSHLI*YNRAGTTLAWG Trigger: CCCCCAAGCCAACGTGGTACCCGCTCTGTTGTATCAGATCAAGTGGCTCTGGTGTGGCTCATTGAAAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | TTTCCTGCATGGGCAGCGACAAGCATCTCTCTCCCCTaGCACCCTAGACATTACGAAGTCTCAGAGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FPAWAATSISLP*HPRHYEVSEFT Trigger: TGTGAACTCTGAGACTTCGTAATGTCTAGGGTGGCAGGGGAGAGAGATGCTTGTCGCTGCCCATGCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | CAGGAATCGGGAGATGGAGTTCAGGGGTATATCCTCTaGTGTATAGTGAGTTCAAGGTCAGCCTGGCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: QESGDGVQGYIL*CIVSSRSAWLR Trigger: ACGGAGCCAGGCTGACCTTGAACTCACTATACAGCAGAGGATATACCCCTGAACTCCATCTCCCGATTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGATACAACAGAGCGGGTACCACGTTGGCTTGGGGGTGGGTGGGGGAGCGCACAGGTACGGAATTTaGTATTTTCTCTTGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DLIQQSGYHVGLGVGGGAHRYGI*YFLLVC Trigger: ACAAACCAAGAGAAAATACAAAATTCCGTACCTGTG...CGCTCCCCCACCCACCCCCAAGCCAACGTGGTACCCGCTCTGTTGTATCAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | CACCACCAACAGAAAGGCTGTCGTCCCATTACCTCATaGAGTCCAAGTAACACCATGGCAGAGACAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HHQQKGCRPITS*SPSNTMAETVR Trigger: TCTCACTGTCTCTGCCATGGTGTTACTTGGACTGCATGAGGTAATGGGACGACAGCCTTTCTGTTGGTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | CATCAGCTCTTTACAATTCTGCTTCCTTCCACGCTCTaGGCTACTCCCTCAGGAAAACAGGAACCAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HQLFTILLPSTL*ATPSGKQEPAS Trigger: GGAAGCTGGTTCCTGTTTTCCTGAGGGAGTAGCCCAGAGCGTGGAAGGAAGCAGAATTGTAAAGAGCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | GAAGTCTGGCTCCAAATCCATCTAGTCAAAGGGAGCTaGAACCCCAAATGTGAACAGAGCTCTTGCTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: EVWLQIHLVKGS*NPKCEQSSCWW Trigger: CCACCAGCAAGAGCTCTGTTCACATTTGGGGTTCCAGCTCCCTTTGACTAGATGGATTTGGAGCCAGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | AGGGGTAGACAGACTTCCCAGAGCCTCCAGAGTGGTTaGGACAAGCAGTTTGTACATCAGATACCCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: RGRQTSQSLQSG*DKQFVHQIPFT Trigger: GGTAAAGGGTATCTGATGTACAAACTGCTTGTCCCAACCACTCTGGAGGCTCTGGGAAGTCTGTCTACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | GACACCACCAAGTCCTACCATGGCACACATCTTCTCTaGAAATGTGAGGCGTGCAAGGACTCATTTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: DTTKSYHGTHLL*KCEACKDSFLC Trigger: GCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGAGAAGATGTGTGCCATGGTAGGACTTGGTGGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | GAAAATAGCATGAACCCAGAAGAGAGCCCTGTGTTCTaGTCACTGCCGCTTCTAACAGTTCCGTGTGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: ENSMNPEESPVF*SLPLLTVPCGH Trigger: ATGTCCACACGGAACTGTTAGAAGCGGCAGTGACCAGAACACAGGGCTCTCTTCTGGGTTCATGCTATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | CCTGCCAGACAAGCTCGGCTCTTTATTTTTCTTTGCTaGGTTCAGTTCTGGCAGATAAAAGCAGGAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PARQARLFIFLC*VQFWQIKAGGL Trigger: GAGGCCTCCTGCTTTTATCTGCCAGAACTGAACTCAGCAAAGAAAAATAAAGAGCCGAGCTTGTCTGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | ATAGCAATCTGCCAGCAAGGCTTGGGGTCACAATGGTaGCCTGGCAGATCTGTTCTAAATTATGAGCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IAICQQGLGSQW*PGRSVLNYEPD Trigger: GTCTGGCTCATAATTTAGAACAGATCTGCCAGGTCACCATTGTGACCCCAAGCCTTGCTGGCAGATTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | GACATTTCACGGCATCTGGTCTCCAAAAAGGACTGTTaGTGTACCATAACTGAGTCGGTTTGTTCAGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: DISRHLVSKKDC*CTITESVCSDG Trigger: CCCGTCTGAACAAACCGACTCAGTTATGGTACAGCAACAGTCCTTTTTGGAGACCAGATGCCGTGAAATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | GTGAGGCGTGCAAGGACTCATTTCTTTGCTAGGAAATaGACGAAATACAAGCAGAGGGTGGCTTCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: VRRARTHFFARK*TKYKQRVASRS Trigger: TGATCTGGAAGCCACCCTCTGCTTGTATTTCGTCCATTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | AGAAGCATGACAGTAAAGTCAGGTGGACAGAAGACATaGGCTCAGCTCTACAGAGTGTCATCAGGGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RSMTVKSGGQKT*AQLYRVSSGHS Trigger: TGAATGCCCTGATGACACTCTGTAGAGCTGAGCTCATGTCTTCTGTCCACCTGACTTTACTGTCATGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | AATACCCTGCCTTCACCCACAATGCCTGTTTTTCAATaGGCCACACCAGAGCCACTTGATCTGATACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: NTLPSPTMPVFQ*ATPEPLDLIQQ Trigger: CTGTTGTATCAGATCAAGTGGCTCTGGTGTGGCTCATTGAAAAACAGGCATTGTGGGTGAAGGCAGGGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR GCA 72 bp | CTTCACAGACTCTACATAGAAGCGAGTCAAAATCAATaGGTCTTGGCAGCCAGGGAAAGCAGGATAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LHRLYIEASQNQ*VLAARESRIKG Trigger: TCCCTTTATCCTGCTTTCCCTGGCTGCCAAGACGCATTGATTTTGACTCGCTTCTATGTAGAGTCTGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | CAAGTCCTACCATGGCACACATCTTCTCTGGAAATGTaGGGCGTGCAAGGACTCATTTCTTTGCTAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QVLPWHTSSLEM*GVQGLISLLGN Trigger: ATTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGAGAAGATGTGTGCCATGGTAGGACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | CCTCATGCAGTCCAAGTAACACCATGGCAGAGACAGTaGGACAATAAAGACACAGCCAGCATGCTTCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: PHAVQVTPWQRQ*DNKDTASMLQY Trigger: ATATTGAAGCATGCTGGCTGTGTCTTTATTGTCTCACTGTCTCTGCCATGGTGTTACTTGGACTGCATGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | GATATGACCACCATGAGATCTAGAGAGCTGTCTCGATaGGGACAGAAAGAAGCTAGGACATGTCAAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: DMTTMRSRELSR*GQKEARTCQEM Trigger: CATTTCTTGACATGTCCTAGCTTCTTTCTGTCCCCATCGAGACAGCTCTCTAGATCTCATGGTGGTCATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | TCTTTGCTAGGAAATGGACGAAATACAAGCAGAGGGTaGCTTCCAGATCATTCTGGGACCCTCTACGTAATT | + |
|
Preference number: 3 (lower is better) Translates to: SLLGNGRNTSRG*LPDHSGTLYVI Trigger: AATTACGTAGAGGGTCCCAGAATGATCTGGAAGCCACCCTCTGCTTGTATTTCGTCCATTTCCTAGCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | ATAAGGCATAGATTTAAAGTGGAGAAAAGAGCCTTTTaGCAGCAGACTGAGGAGGTGTGCACTTTCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IRHRFKVEKRAF*QQTEEVCTFLV Trigger: GACCAGGAAAGTGCACACCTCCTCAGTCTGCTGTCAAAAGGCTCTTTTCTCCACTTTAAATCTATGCCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CCA 72 bp | CTGTGTGCGTGCCAAGACCCGGATTTGATAAATACGTaGTTTCCATTACTACAGGAGAGTATTTACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCACQDPDLINT*FPLLQESIYRG Trigger: TCCTCTGTAAATACTCTCCTGTAGTAATGGAAACCACGTATTTATCAAATCCGGGTCTTGGCACGCACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | AAGCACCAGACACACTATATAGGTAAGGGAAGAAAATaGCATCCCGTTTCTCTGGATATGACCACCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KHQTHYIGKGRK*HPVSLDMTTMR Trigger: TCTCATGGTGGTCATATCCAGAGAAACGGGATGTCATTTTCTTCCCTTACCTATATAGTGTGTCTGGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR TCA 72 bp | GCCCTTCTAGAAACTTCTGAAAACAGTAGCTTATTCTaGGTGTTTGGGGACCATGGGAAATCGGACATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALLETSENSSLF*VFGDHGKSDIS Trigger: TGAAATGTCCGATTTCCCATGGTCCCCAAACACTCAGAATAAGCTACTGTTTTCAGAAGTTTCTAGAAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR-3UTR CAA 90 bp | CACATCTTCTCTGGAAATGTGAGGCGTGCAAGGACTCATTTCTTTGCTAGGAAAGCTCTTTATTTTTCTTaGCTGAGTTCAGTTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HIFSGNVRRARTHFFARKALYFS*LSSVLA Trigger: TGCCAGAACTGAACTCAGCAAAGAAAAATAAAGAGC...TTTCCTAGCAAAGAAATGAGTCCTTGCACGCCTCACATTTCCAGAGAAGATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| CDS-3UTR GCA 90 bp | GGGGCACGGCCTGCTGGCTGCTACTTCCCTGCCAGACAAGCTCGGCTCTTTATTTCGTCGCCCAGCGCCTaGAGCCGCAGCGCGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GARPAGCYFPARQARLFISSPSA*SRSAVT Trigger: GGTGACCGCGCTGCGGCTGCAGGCGCTGGGCGACGA...AATAAAGAGCCGAGCTTGTCTGGCAGGGAAGTAGCAGCCAGCAGGCCGTGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| CDS-3UTR GCA 90 bp | GTGGTTTCCATTACTACAGGAGAGTATTTACAGAGGACTTGGCTGAAAAGTCCCCGCATGGCGCGTCGGTaGAGCTCGTCGCCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVSITTGEYLQRTWLKSPRMARR*SSSPSA Trigger: GGCGCTGGGCGACGAGCTGCACCGACGCGCCATGCG...GGGACTTTTCAGCCAAGTCCTCTGTAAATACTCTCCTGTAGTAATGGAAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 72 bp | CTTCCCAGAGCCTCCAGAGTGGTTGGGACAAGCAGTTaGTACATCAGATACCCTTTACCCTGGAGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRASRVVGTSS*YIRYPLPWSFL Trigger: CAGAAAACTCCAGGGTAAAGGGTATCTGATGTACAAACTGCTTGTCCCAACCACTCTGGAGGCTCTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 72 bp | GGTTTCCATTACTACAGGAGAGTATTTACAGAGGACTaGGCTGAAAAGTCCCATCAAGGAGGGTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFHYYRRVFTED*AEKSHQGGSGL Trigger: CAGCCCTGACCCTCCTTGATGGGACTTTTCAGCCAAGTCCTCTGTAAATACTCTCCTGTAGTAATGGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||
| 3UTR CAA 72 bp | CTTCCCTGCCAGACAAGCTCGGCTCTTTATTTTTCTTaGCTGAGTTCAGTTCTGGCAGATAAAAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPCQTSSALYFS*LSSVLADKSRR Trigger: CCTCCTGCTTTTATCTGCCAGAACTGAACTCAGCAAAGAAAAATAAAGAGCCGAGCTTGTCTGGCAGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054836.7 |
||