Pregenerated sensors for HRH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039059Ensembl transcript IDs: ENSMUST00000056480.10, ENSMUST00000163215.8, ENSMUST00000164442.2, ENSMUST00000165248.8, ENSMUST00000165762.8, ENSMUST00000166724.2, ENSMUST00000171736.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGGGGTGGGGCAGGCAGAAGCAGCTGGCGCGGCTCAGCCGGAAGCTaGAGCGCCGAGGGAGGAGGGCGTGGGAGCCCACACCTGCCAATC | + |
Preference number: 1 (lower is better) Translates to: GGGAGRSSWRGSAGS*SAEGGGRGSPHLPI Trigger: GATTGGCAGGTGTGGGCTCCCACGCCCTCCTCCCTCGGCGCTGCAGCTTCCGGCTGAGCCGCGCCAGCTGCTTCTGCCTGCCCCACCCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | GCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGGGGTaGGGCAGGCAGAAGCAGCTGGCGCGGCTCAGCCGGAAGCTGCAG | + |
Preference number: 1 (lower is better) Translates to: ADGASRAGLSSRAWG*GRQKQLARLSRKLQ Trigger: CTGCAGCTTCCGGCTGAGCCGCGCCAGCTGCTTCTGCCTGCCCCACCCCCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR GCA 90 bp | CCGGAAGCTGCAGCGCCGAGGGAGGAGGGCGTGGGAGCCCACACCTaGCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTCTTGAT | + |
Preference number: 1 (lower is better) Translates to: PEAAAPREEGVGAHT*QSSPELLGNFVSLD Trigger: ATCAAGAGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCACGCCCTCCTCCCTCGGCGCTGCAGCTTCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | CCTCGGGGATGGAGCTGCCACCGGACAGGTACTCCCAACTCAGGATaGCAGGCCCATACAGCAGGAAGGCCAGCACCCACACCAGTGCCA | + |
Preference number: 1 (lower is better) Translates to: PRGWSCHRTGTPNSG*QAHTAGRPAPTPVP Trigger: TGGCACTGGTGTGGGTGCTGGCCTTCCTGCTGTATGGGCCTGCCATCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR GCA 90 bp | CCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGGTGGGGCAGCTaGTCACTTCCAGCACTGCTCCAGGGAGCCATGGGGCTGGACCTT | + |
Preference number: 1 (lower is better) Translates to: PQNRYKGLAVEGWGS*SLPALLQGAMGLDL Trigger: AAGGTCCAGCCCCATGGCTCCCTGGAGCAGTGCTGGAAGTGAGCAGCTGCCCCACCCTTCTACGGCCAGGCCCTTGTACCTGTTCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR TCA 90 bp | GAGGTGGAAGGCATGCCTGGGACTCCCGGATTGTCTCTTCTGGGGTaGAGGAGAATGTGGCGGCAAAGCCAGCCAGCACACTCCAGTTCC | + |
Preference number: 1 (lower is better) Translates to: EVEGMPGTPGLSLLG*RRMWRQSQPAHSSS Trigger: GGAACTGGAGTGTGCTGGCTGGCTTTGCCGCCACATTCTCCTTCACCCCAGAAGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR TCA 90 bp | GCAAAGCATTCCTCCCAGGTGTCGAGAACCTGCTCTCCCTCCTGCTaGCTGTCCCATGAGCCGAAGAGCCGCTCTACCCCACAACCAACC | + |
Preference number: 1 (lower is better) Translates to: AKHSSQVSRTCSPSC*LSHEPKSRSTPQPT Trigger: GGTTGGTTGTGGGGTAGAGCGGCTCTTCGGCTCATGGGACAGTCAGCAGGAGGGAGAGCAGGTTCTCGACACCTGGGAGGAATGCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | GTGGCAGGTGTGTGCACATGCAGGGCGCATTGCCAGGGCAGGAGCTaGGAGCACACACCAAGGTTTGCATTAGGGAGGACACCAACCACT | + |
Preference number: 1 (lower is better) Translates to: VAGVCTCRAHCQGRS*EHTPRFALGRTPTT Trigger: AGTGGTTGGTGTCCTCCCTAATGCAAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGTGCACACACCTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR GCA 90 bp | AAGTGTGTGGTGGAAGTGGCAGGTGTGTGCACATGCAGGGCGCATTaGCAGGGCAGGAGCTGGGAGCACACACCAAGGTTTGCATTAGGG | + |
Preference number: 1 (lower is better) Translates to: KCVVEVAGVCTCRAH*QGRSWEHTPRFALG Trigger: CCCTAATGCAAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGTGCACACACCTGCCACTTCCACCACACACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | AGTACCAGTTGTAGAAGAACTCAGCATAGCAGTGGCCCTCGGGGATaGAGCTGCCACCGGACAGGTACTCCCAACTCAGGATGGCAGGCC | + |
Preference number: 1 (lower is better) Translates to: STSCRRTQHSSGPRG*SCHRTGTPNSGWQA Trigger: GGCCTGCCATCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACTGCTATGCTGAGTTCTTCTACAACTGGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR TCA 90 bp | GCGACTTGGCTACCTTCTTGTCCCGCGACAGCCGAAAGCGCTGGGTaGTGCTTTGGGATACCATCTTCATGCGCTTCTCCAAGGACGCTG | + |
Preference number: 1 (lower is better) Translates to: ATWLPSCPATAESAG*CFGIPSSCASPRTL Trigger: CAGCGTCCTTGGAGAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAAGTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR GCA 90 bp | CAGCAAAGGGCATCGCCCCAGATCGTCTTGGGAGAGAGAAGGTATTaGAAGTGTGTGGTGGAAGTGGCAGGTGTGTGCACATGCAGGGCG | + |
Preference number: 1 (lower is better) Translates to: QQRASPQIVLGERRY*KCVVEVAGVCTCRA Trigger: CGCCCTGCATGTGCACACACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGCGATGCCCTTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR GCA 90 bp | AGTTGTAGAAGAACTCAGCATAGCAGTGGCCCTCGGGGATGGAGCTaGCACCGGACAGGTACTCCCAACTCAGGATGGCAGGCCCATACA | + |
Preference number: 1 (lower is better) Translates to: SCRRTQHSSGPRGWS*HRTGTPNSGWQAHT Trigger: TGTATGGGCCTGCCATCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACTGCTATGCTGAGTTCTTCTACAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CCA 90 bp | GACACTTCATGGGGCAAAGAGTTGAAGGGAGAGGGGGTTAGGAGCTaGGCTCCGGGATTAAGGAAGAGACAGCGGCAGCAAAGGGCATCG | + |
Preference number: 1 (lower is better) Translates to: DTSWGKELKGEGVRS*APGLRKRQRQQRAS Trigger: CGATGCCCTTTGCTGCCGCTGTCTCTTCCTTAATCCCGGAGCCCAGCTCCTAACCCCCTCTCCCTTCAACTCTTTGCCCCATGAAGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | GAAGAGCAGAGAAGCTTCAAGGTTCCTGGGGCGCTTGACACTTCATaGGGCAAAGAGTTGAAGGGAGAGGGGGTTAGGAGCTGGGCTCCG | + |
Preference number: 1 (lower is better) Translates to: EEQRSFKVPGALDTS*GKELKGEGVRSWAP Trigger: CGGAGCCCAGCTCCTAACCCCCTCTCCCTTCAACTCTTTGCCCCATGAAGTGTCAAGCGCCCCAGGAACCTTGAAGCTTCTCTGCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | GCCAGCGACTTGGCTACCTTCTTGTCCCGCGACAGCCGAAAGCGCTaGGTGATGCTTTGGGATACCATCTTCATGCGCTTCTCCAAGGAC | + |
Preference number: 1 (lower is better) Translates to: ASDLATFLSRDSRKR*VMLWDTIFMRFSKD Trigger: GTCCTTGGAGAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAAGTCGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CCA 90 bp | AGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTaGCAGGTGTGTGCACATGCAGGGCGCATTGCCAGGGCAGGAGCT | + |
Preference number: 1 (lower is better) Translates to: RSSWEREGIASVWWK*QVCAHAGRIARAGA Trigger: AGCTCCTGCCCTGGCAATGCGCCCTGCATGTGCACACACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 90 bp | GCTACCTTCTTGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTTaGGATACCATCTTCATGCGCTTCTCCAAGGACGCTGAAGACGCT | + |
Preference number: 1 (lower is better) Translates to: ATFLSRDSRKRWVML*DTIFMRFSKDAEDA Trigger: AGCGTCTTCAGCGTCCTTGGAGAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CCA 90 bp | TATGCAAAGGAGGACATCACTGGCACTGCACTGAGTGTGTGGAGGTaGAAGGCATGCCTGGGACTCCCGGATTGTCTCTTCTGGGGTGAA | + |
Preference number: 1 (lower is better) Translates to: YAKEDITGTALSVWR*KACLGLPDCLFWGE Trigger: TTCACCCCAGAAGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCCACACACTCAGTGCAGTGCCAGTGATGTCCTCCTTTGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | CTTGAGGAGCTGCCGGAGCTGGAGGTAGGCGAGGCAGCAGCGCCTCCACCGCTGATCAGGTGGGGGTTCTaGACCAGCCTCTCGGCCCCC | + |
Preference number: 2 (lower is better) Translates to: LEELPELEVGEAAAPPPLIRWGF*TSLSAP Trigger: GGGGGCCGAGAGGCTGGTCCAGAACCCCCACCTGAT...CAGCGGTGGAGGCGCTGCTGCCTCGCCTACCTCCAGCTCCGGCAGCTCCTCAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR TCA 90 bp | GGTGGGGGTTCTGGACCAGCCTCTCGGCCCCCATCCAGCCGAAGACGAGTGCGCGCCCCACTGCCGGGTTaGTGCTCTAAGAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: GGGSGPASRPPSSRRRVRAPLPG*CSKRLP Trigger: TGGCAGCCTCTTAGAGCATCAACCCGGCAGTGGGGC...GCGCACTCGTCTTCGGCTGGATGGGGGCCGAGAGGCTGGTCCAGAACCCCCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CCA 90 bp | GGGGTTCTGGACCAGCCTCTCGGCCCCCATCCAGCCGAAGACGAGTGCGCCTCTAGTGGCCCTCGGGGATaGAGCTGCCACCGGACAGGT | + |
Preference number: 2 (lower is better) Translates to: GVLDQPLGPHPAEDECASSGPRG*SCHRTG Trigger: ACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACT...AGAGGCGCACTCGTCTTCGGCTGGATGGGGGCCGAGAGGCTGGTCCAGAACCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR GCA 90 bp | GGCCTGGCCGTAGAAGGGTGGGGCAGCTGCTCACTTCCAGCACTGCTCCAGGGAAGCGTGGCCTCTCAGTaGCCCTTGAGGAGCTGCCGG | + |
Preference number: 2 (lower is better) Translates to: GLAVEGWGSCSLPALLQGSVASQ*PLRSCR Trigger: CCGGCAGCTCCTCAAGGGGCACTGAGAGGCCACGCT...TCCCTGGAGCAGTGCTGGAAGTGAGCAGCTGCCCCACCCTTCTACGGCCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR TCA 90 bp | AGGGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGAGCCCCTTTTGAGTaGGCGTGGCCTCTCAGTGCC | + |
Preference number: 2 (lower is better) Translates to: RAHARAPPQNRYKGLAVEGAPFE*AWPLSA Trigger: GGCACTGAGAGGCCACGCTCACTCAAAAGGGGCTCC...TTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR GCA 90 bp | GCCATGGCAAGCAGCCCGGATGATCATGAGGAGTGTGTACGGGGCCCAGCAGAGCCACCAGCCACAGCTTaGAGAGGCCCCGGCCAAAGG | + |
Preference number: 2 (lower is better) Translates to: AMASSPDDHEECVRGPAEPPATA*RGPGQR Trigger: CCTTTGGCCGGGGCCTCTGCAAGCTGTGGCTGGTGG...CTCTGCTGGGCCCCGTACACACTCCTCATGATCATCCGGGCTGCTTGCCATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR GCA 90 bp | AGGGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAACCAGGGCACAAGGATTaGAGAGCATGCAGAGGCCTG | + |
Preference number: 2 (lower is better) Translates to: RAHARAPPQNRYKGLAVEPGHKD*RACRGL Trigger: CAGGCCTCTGCATGCTCTGCAATCCTTGTGCCCTGG...TTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | AGGGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAATGCCAGGGCAGGAGCTaGGAGCACACACCAAGGTTT | + |
Preference number: 2 (lower is better) Translates to: RAHARAPPQNRYKGLAVECQGRS*EHTPRF Trigger: AAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCA...TTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | CCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGGTGGGGCAGCTGCTCACTGGGTTGGGCATCAGGTaGGGGTTCTGGACCAGCCTC | + |
Preference number: 2 (lower is better) Translates to: PSEQVQGPGRRRVGQLLTGLGIR*GFWTSL Trigger: GAGGCTGGTCCAGAACCCCCACCTGATGCCCAACCC...AGTGAGCAGCTGCCCCACCCTTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 90 bp | CGCTTCTCCAAGGACGCTGAAGACGCTGATGGCTTGGAGCCCCTTTaGAGTGAGCGTGGCCTCTCAGTGCCCCTTGAGGAGCTGCCGGAG | + |
Preference number: 2 (lower is better) Translates to: RFSKDAEDADGLEPL*SERGLSVPLEELPE Trigger: CTCCGGCAGCTCCTCAAGGGGCACTGAGAGGCCACGCTCACTCAAAAGGGGCTCCAAGCCATCAGCGTCTTCAGCGTCCTTGGAGAAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 90 bp | GCTGCTCACTTCCAGCACTGCTCCAGGGAGCCATGGGGCTGGACCTaGAGCTTCTGGGGGCAGAGGAGCTTGGTGAAGGCTCTACGGAAG | + |
Preference number: 2 (lower is better) Translates to: AAHFQHCSREPWGWT*SFWGQRSLVKALRK Trigger: CTTCCGTAGAGCCTTCACCAAGCTCCTCTGCCCCCAGAAGCTCAAGGTCCAGCCCCATGGCTCCCTGGAGCAGTGCTGGAAGTGAGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR TCA 90 bp | GTGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTGCCCCACTGCCGGGTTaGTGCTCTAAGAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: VGAHTCQSSPELLGNFVSAPLPG*CSKRLP Trigger: TGGCAGCCTCTTAGAGCATCAACCCGGCAGTGGGGC...AGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | TCACTTCCAGCACTGCTCCAGGGAGCCATGGGGCTGGACCTTGAGCTTCTGGGGACCTGTGCAATGGCATaGCCTCCCCGTGCCCCTTTG | + |
Preference number: 2 (lower is better) Translates to: SLPALLQGAMGLDLELLGTCAMA*PPRAPL Trigger: CAAAGGGGCACGGGGAGGCCATGCCATTGCACAGGT...CCCCAGAAGCTCAAGGTCCAGCCCCATGGCTCCCTGGAGCAGTGCTGGAAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CCA 90 bp | GAAGACGCTGATGGCTTGGAGCCCCTTTTGAGTGAGCGTGGCCTCTCAGTGCCCCCCATACCTGTGCAATaGCATGGCCTCCCCGTGCCC | + |
Preference number: 2 (lower is better) Translates to: EDADGLEPLLSERGLSVPPIPVQ*HGLPVP Trigger: GGGCACGGGGAGGCCATGCCATTGCACAGGTATGGG...GGGCACTGAGAGGCCACGCTCACTCAAAAGGGGCTCCAAGCCATCAGCGTCTTC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 90 bp | GGGGCCCAGCAGAGCCCAAAGATGCTCACGATGATAGCCAGCGACTaGGCTACCTTCTTGTCCCGCGACAGCCGAAAGCGCTGGGTGATG | + |
Preference number: 2 (lower is better) Translates to: GAQQSPKMLTMIASD*ATFLSRDSRKRWVM Trigger: CATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAAGTCGCTGGCTATCATCGTGAGCATCTTTGGGCTCTGCTGGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CCA 90 bp | CCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCGGTGGAAGGCATGCCTaGGACTCCCGGATTGTCTCT | + |
Preference number: 2 (lower is better) Translates to: PNSDCADGASRAGLSSRAGGRHA*DSRIVS Trigger: AGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACC...GGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | GGCCTGGCCGTAGAAGGGTGGGGCAGCTGCTCACTTCCAGCACTGCTCCAGGGACGCTGGGTGATGCTTTaGGATACCATCTTCATGCGC | + |
Preference number: 2 (lower is better) Translates to: GLAVEGWGSCSLPALLQGRWVML*DTIFMR Trigger: GCGCATGAAGATGGTATCCCAAAGCATCACCCAGCG...TCCCTGGAGCAGTGCTGGAAGTGAGCAGCTGCCCCACCCTTCTACGGCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR GCA 90 bp | GTGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTTGGAGGTGGAAGGCATaGCTGGGACTCCCGGATTGT | + |
Preference number: 2 (lower is better) Translates to: VGAHTCQSSPELLGNFVSWRWKA*LGLPDC Trigger: ACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCCA...AGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | AATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGACTGCACTGAGTGTGTaGAGGTGGAAGGCATGCCTG | + |
Preference number: 2 (lower is better) Translates to: NSDCADGASRAGLSSRAWTALSV*RWKACL Trigger: CAGGCATGCCTTCCACCTCCACACACTCAGTGCAGT...CCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CAA 90 bp | CAAGTGTGTGGTGGAAGTGGCAGGTGTGTGCACATGCAGGGCGCATaGCCAGGGCAGGAGCTGGGAGCACACACCAAGGTTTGCATTAGG | + |
Preference number: 2 (lower is better) Translates to: QVCGGSGRCVHMQGA*PGQELGAHTKVCIR Trigger: CCTAATGCAAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGTGCACACACCTGCCACTTCCACCACACACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR TCA 90 bp | AATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGTTGTCTCTTCTGGGGTaGAGGAGAATGTGGCGGCAA | + |
Preference number: 2 (lower is better) Translates to: NSDCADGASRAGLSSRAWLSLLG*RRMWRQ Trigger: TTGCCGCCACATTCTCCTTCACCCCAGAAGAGACAA...CCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR GCA 90 bp | GCCCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCACATGCAGGGCGCATTaGCAGGGCAGGAGCTGGGAG | + |
Preference number: 2 (lower is better) Translates to: APDRLGREKVLQVCGGSGTCRAH*QGRSWE Trigger: CTCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGT...GCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR GCA 90 bp | CTTGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTTGGGATACCATCTTCATCCCACCCCATACCTGTaGAATGGCATGGCCTCCCCG | + |
Preference number: 2 (lower is better) Translates to: LVPRQPKALGDALGYHLHPTPYL*NGMASP Trigger: CGGGGAGGCCATGCCATTGCACAGGTATGGGGTGGG...ATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CCA 90 bp | CCACCCCCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGCCCCAGATCGTCTTaGGAGAGAGAAGGTATTGCA | + |
Preference number: 2 (lower is better) Translates to: PPPNSDCADGASRAGLSSRPRSS*EREGIA Trigger: TGCAATACCTTCTCTCTCCCAAGACGATCTGGGGCG...GGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGGGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR GCA 90 bp | CTTGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTTGGGATACCATCTTCATCAGCACCCACACCAGTaGCATCTTCCGAACAGCCCG | + |
Preference number: 2 (lower is better) Translates to: LVPRQPKALGDALGYHLHQHPHQ*HLPNSP Trigger: CGGGCTGTTCGGAAGATGGCACTGGTGTGGGTGCTG...ATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 90 bp | AGCCCAAAGATGCTCACGATGATAGCCAGCGACTTGGCTACCTTCTaGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTTGGGATACC | + |
Preference number: 2 (lower is better) Translates to: SPKMLTMIASDLATF*SRDSRKRWVMLWDT Trigger: GGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAAGTCGCTGGCTATCATCGTGAGCATCTTTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CCA 90 bp | TTGAAGGGAGAGGGGGTTAGGAGCTGGGCTCCGGGATTAAGGAAGAGACAGCGGAGTGTGTGGTGGAAGTaGCAGGTGTGTGCACATGCA | + |
Preference number: 2 (lower is better) Translates to: LKGEGVRSWAPGLRKRQRSVWWK*QVCAHA Trigger: TGCATGTGCACACACCTGCCACTTCCACCACACACT...CCGCTGTCTCTTCCTTAATCCCGGAGCCCAGCTCCTAACCCCCTCTCCCTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR TCA 90 bp | CCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTCTCCTCCATCTTCCTaGAAACATCCAGAATGGAAG | + |
Preference number: 2 (lower is better) Translates to: PNSDCADGASRAGLSSRASPPSS*KHPEWK Trigger: CTTCCATTCTGGATGTTTTCAGGAAGATGGAGGAGA...GGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
||
3UTR-3UTR GCA 90 bp | TTGAAGGGAGAGGGGGTTAGGAGCTGGGCTCCGGGATTAAGGAAGAGACAGCGGGCACACACCAAGGTTTaGATTAGGGAGGACACCAAC | + |
Preference number: 2 (lower is better) Translates to: LKGEGVRSWAPGLRKRQRAHTKV*IREDTN Trigger: GTTGGTGTCCTCCCTAATGCAAACCTTGGTGTGTGC...CCGCTGTCTCTTCCTTAATCCCGGAGCCCAGCTCCTAACCCCCTCTCCCTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
||
3UTR CAA 90 bp | TTAAGGAAGAGACAGCGGCAGCAAAGGGCATCGCCCCAGATCGTCTaGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGGT | + |
Preference number: 2 (lower is better) Translates to: LRKRQRQQRASPQIV*GERRYCKCVVEVAG Trigger: ACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGCGATGCCCTTTGCTGCCGCTGTCTCTTCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
||
3UTR CAA 90 bp | ATTGTGTCTTCACATTGGCAGAGGCAGCACACCAGGGCACAAGGATaGCAGAGCATGCAGAGGCCTGAGGTAAGTACACAGGACGAGGCA | + |
Preference number: 2 (lower is better) Translates to: IVSSHWQRQHTRAQG*QSMQRPEVSTQDEA Trigger: TGCCTCGTCCTGTGTACTTACCTCAGGCCTCTGCATGCTCTGCAATCCTTGTGCCCTGGTGTGCTGCCTCTGCCAATGTGAAGACACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CCA 90 bp | AGCAGAGAAGCTTCAAGGTTCCTGGGGCGCTTGACACTTCATGGGGCAAAGAGTCCGGATTGTCTCTTCTaGGGTGAAGGAGAATGTGGC | + |
Preference number: 2 (lower is better) Translates to: SREASRFLGRLTLHGAKSPDCLF*GEGECG Trigger: GCCACATTCTCCTTCACCCCAGAAGAGACAATCCGG...ACTCTTTGCCCCATGAAGTGTCAAGCGCCCCAGGAACCTTGAAGCTTCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
||
3UTR GCA 72 bp | GCAGGCAGAAGCAGCTGGCGCGGCTCAGCCGGAAGCTaGAGCGCCGAGGGAGGAGGGCGTGGGAGCCCACAC | + |
Preference number: 3 (lower is better) Translates to: AGRSSWRGSAGS*SAEGGGRGSPH Trigger: GTGTGGGCTCCCACGCCCTCCTCCCTCGGCGCTGCAGCTTCCGGCTGAGCCGCGCCAGCTGCTTCTGCCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
||
3UTR-3UTR CAA 90 bp | GCTGGAGGTGGCGAGGGTTGGGCATCAGGTGGGGGTTCTGGACCAGCCTCTCGGTCCGAACAGCCCGTCTaGTGTCCCCCTGCTGGGCCC | + |
Preference number: 3 (lower is better) Translates to: AGGGEGWASGGGSGPASRSEQPV*CPPAGP Trigger: GGGCCCAGCAGGGGGACACAAGACGGGCTGTTCGGA...CCGAGAGGCTGGTCCAGAACCCCCACCTGATGCCCAACCCTCGCCACCTCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CAA 90 bp | GGCCCTCGGGGATGGAGCTGCCACCGGACAGGTACTCCCAACTCAGGATGGCAGACCACCAGCCACAGCTaGCAGAGGCCCCGGCCAAAG | + |
Preference number: 3 (lower is better) Translates to: GPRGWSCHRTGTPNSGWQTTSHS*QRPRPK Trigger: CTTTGGCCGGGGCCTCTGCAAGCTGTGGCTGGTGGT...CTGCCATCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
||
3UTR GCA 72 bp | AGGTACAAGGGCCTGGCCGTAGAAGGGTGGGGCAGCTaGTCACTTCCAGCACTGCTCCAGGGAGCCATGGGG | + |
Preference number: 3 (lower is better) Translates to: RYKGLAVEGWGS*SLPALLQGAMG Trigger: CCCCATGGCTCCCTGGAGCAGTGCTGGAAGTGAGCAGCTGCCCCACCCTTCTACGGCCAGGCCCTTGTACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CAA 90 bp | CTCAGCATAGCAGTGGCCCTCGGGGATGGAGCTGCCACCGGACAGGTACTCCCAAGGCTGCCATGGCATTaGGAGCAGACCCCGGACAAA | + |
Preference number: 3 (lower is better) Translates to: LSIAVALGDGAATGQVLPRLPWH*EQTPDK Trigger: TTTGTCCGGGGTCTGCTCCAAATGCCATGGCAGCCT...TGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACTGCTATGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
||
3UTR TCA 72 bp | TCCTCCCAGGTGTCGAGAACCTGCTCTCCCTCCTGCTaGCTGTCCCATGAGCCGAAGAGCCGCTCTACCCCA | + |
Preference number: 3 (lower is better) Translates to: SSQVSRTCSPSC*LSHEPKSRSTP Trigger: TGGGGTAGAGCGGCTCTTCGGCTCATGGGACAGTCAGCAGGAGGGAGAGCAGGTTCTCGACACCTGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR GCA 72 bp | AGGCCCATACAGCAGGAAGGCCAGCACCCACACCAGTaGCATCTTCCGAACAGCCCGTCTTGTGTCCCCCTG | + |
Preference number: 3 (lower is better) Translates to: RPIQQEGQHPHQ*HLPNSPSCVPL Trigger: CAGGGGGACACAAGACGGGCTGTTCGGAAGATGGCACTGGTGTGGGTGCTGGCCTTCCTGCTGTATGGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CCA 72 bp | TGGAGCTGCCACCGGACAGGTACTCCCAACTCAGGATaGCAGGCCCATACAGCAGGAAGGCCAGCACCCACA | + |
Preference number: 3 (lower is better) Translates to: WSCHRTGTPNSG*QAHTAGRPAPT Trigger: TGTGGGTGCTGGCCTTCCTGCTGTATGGGCCTGCCATCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
||
3UTR CCA 72 bp | TGCTCCAGGGAGCCATGGGGCTGGACCTTGAGCTTCTaGGGGCAGAGGAGCTTGGTGAAGGCTCTACGGAAG | + |
Preference number: 3 (lower is better) Translates to: CSREPWGWTLSF*GQRSLVKALRK Trigger: CTTCCGTAGAGCCTTCACCAAGCTCCTCTGCCCCCAGAAGCTCAAGGTCCAGCCCCATGGCTCCCTGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CAA 90 bp | GGACCAGCCTCTCGGCCCCCATCCAGCCGAAGACGAGTGCGCCTCTGGATGTTCCTGATCAGCACGATGTaGAAGACTGAGGAGGCACAC | + |
Preference number: 3 (lower is better) Translates to: GPASRPPSSRRRVRLWMFLISTM*KTEEAH Trigger: GTGTGCCTCCTCAGTCTTCAACATCGTGCTGATCAG...GAACATCCAGAGGCGCACTCGTCTTCGGCTGGATGGGGGCCGAGAGGCTGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR GCA 72 bp | GTGGAAGTGGCAGGTGTGTGCACATGCAGGGCGCATTaGCAGGGCAGGAGCTGGGAGCACACACCAAGGTTT | + |
Preference number: 3 (lower is better) Translates to: VEVAGVCTCRAH*QGRSWEHTPRF Trigger: AAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGTGCACACACCTGCCACTTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR GCA 72 bp | AGAACTCAGCATAGCAGTGGCCCTCGGGGATGGAGCTaGCACCGGACAGGTACTCCCAACTCAGGATGGCAG | + |
Preference number: 3 (lower is better) Translates to: RTQHSSGPRGWS*HRTGTPNSGWQ Trigger: CTGCCATCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACTGCTATGCTGAGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CAA 90 bp | GGAGGTGGAAGGCATGCCTGGGACTCCCGGATTGTCTCTTCTGGGGTGAAGGAGAGGCTGCCATGGCATTaGGAGCAGACCCCGGACAAA | + |
Preference number: 3 (lower is better) Translates to: GGGRHAWDSRIVSSGVKERLPWH*EQTPDK Trigger: TTTGTCCGGGGTCTGCTCCAAATGCCATGGCAGCCT...CTCCTTCACCCCAGAAGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | GTGTGCACATGCAGGGCGCATTGCCAGGGCAGGAGCTaGGAGCACACACCAAGGTTTGCATTAGGGAGGACA | + |
Preference number: 3 (lower is better) Translates to: VCTCRAHCQGRS*EHTPRFALGRT Trigger: TGTCCTCCCTAATGCAAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGTGCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR-3UTR CAA 90 bp | TCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGGTGTGTCACATGCAGGGCGCATaGCCAGGGCAGGAGCTGGGA | + |
Preference number: 3 (lower is better) Translates to: SSWEREGIASVWWKWQVCHMQGA*PGQELG Trigger: TCCCAGCTCCTGCCCTGGCAATGCGCCCTGCATGTG...ACACACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR GCA 72 bp | ACTGGCACTGCACTGAGTGTGTGGAGGTGGAAGGCATaGCTGGGACTCCCGGATTGTCTCTTCTGGGGTGAA | + |
Preference number: 3 (lower is better) Translates to: TGTALSVWRWKA*LGLPDCLFWGE Trigger: TTCACCCCAGAAGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCCACACACTCAGTGCAGTGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | GCAAAGGAGGACATCACTGGCACTGCACTGAGTGTGTaGAGGTGGAAGGCATGCCTGGGACTCCCGGATTGT | + |
Preference number: 3 (lower is better) Translates to: AKEDITGTALSV*RWKACLGLPDC Trigger: ACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCCACACACTCAGTGCAGTGCCAGTGATGTCCTCCTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | TGTAGAAGAACTCAGCATAGCAGTGGCCCTCGGGGATaGAGCTGCCACCGGACAGGTACTCCCAACTCAGGA | + |
Preference number: 3 (lower is better) Translates to: CRRTQHSSGPRG*SCHRTGTPNSG Trigger: TCCTGAGTTGGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACTGCTATGCTGAGTTCTTCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CAA 90 bp | GTGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTGGGAGAGAGAAGGTATaGCAAGTGTGTGGTGGAAGT | + |
Preference number: 3 (lower is better) Translates to: VGAHTCQSSPELLGNFVSGREKV*QVCGGS Trigger: ACTTCCACCACACACTTGCAATACCTTCTCTCTCCC...AGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | TGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTaGCAGGTGTGTGCACATGCAGGGCGCATTGCCAGG | + |
Preference number: 3 (lower is better) Translates to: WEREGIASVWWK*QVCAHAGRIAR Trigger: CCTGGCAATGCGCCCTGCATGTGCACACACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | GACAGCGGCAGCAAAGGGCATCGCCCCAGATCGTCTTaGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAG | + |
Preference number: 3 (lower is better) Translates to: DSGSKGHRPRSS*EREGIASVWWK Trigger: CTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGCGATGCCCTTTGCTGCCGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | TTGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTTaGGATACCATCTTCATGCGCTTCTCCAAGGACGCT | + |
Preference number: 3 (lower is better) Translates to: LSRDSRKRWVML*DTIFMRFSKDA Trigger: AGCGTCCTTGGAGAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR TCA 72 bp | CACCAGGGCACAAGGATTGCAGAGCATGCAGAGGCCTaGGGTAAGTACACAGGACGAGGCAAAGCATTCCTC | + |
Preference number: 3 (lower is better) Translates to: HQGTRIAEHAEA*GKYTGRGKAFL Trigger: GAGGAATGCTTTGCCTCGTCCTGTGTACTTACCTCAGGCCTCTGCATGCTCTGCAATCCTTGTGCCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR TCA 72 bp | CTACCTTCTTGTCCCGCGACAGCCGAAAGCGCTGGGTaGTGCTTTGGGATACCATCTTCATGCGCTTCTCCA | + |
Preference number: 3 (lower is better) Translates to: LPSCPATAESAG*CFGIPSSCASP Trigger: TGGAGAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CCA 72 bp | AGAAGCTTCAAGGTTCCTGGGGCGCTTGACACTTCATaGGGCAAAGAGTTGAAGGGAGAGGGGGTTAGGAGC | + |
Preference number: 3 (lower is better) Translates to: RSFKVPGALDTS*GKELKGEGVRS Trigger: GCTCCTAACCCCCTCTCCCTTCAACTCTTTGCCCCATGAAGTGTCAAGCGCCCCAGGAACCTTGAAGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CCA 72 bp | TTGGCTACCTTCTTGTCCCGCGACAGCCGAAAGCGCTaGGTGATGCTTTGGGATACCATCTTCATGCGCTTC | + |
Preference number: 3 (lower is better) Translates to: LATFLSRDSRKR*VMLWDTIFMRF Trigger: GAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR-3UTR CAA 90 bp | CCACCCCCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCAGCTCCTCGGCAATTTaGTCTCTCTTGATTAAACAT | + |
Preference number: 3 (lower is better) Translates to: PPPNSDCADGASRAGLSSSSSAI*SLLIKH Trigger: ATGTTTAATCAAGAGAGACAAAATTGCCGAGGAGCT...GGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGGGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR TCA 90 bp | AGGGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGTAGAGGACGGGGTTaGCGGCCGAGTTGGCCCACA | + |
Preference number: 4 (lower is better) Translates to: RAHARAPPQNRYKGLAVEGRGRG*RPSWPT Trigger: TGTGGGCCAACTCGGCCGTCAACCCCGTCCTCTACC...TTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR TCA 90 bp | GACCAGCCTCTCGGCCCCCATCCAGCCGAAGACGAGTGCGCCTCTGGATGTTCACCACGAAGGCGAGCATaGCCAGCGCGTTGCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: DQPLGPHPAEDECASGCSPRRRA*PARCPA Trigger: TGCTGGGCAACGCGCTGGTCATGCTCGCCTTCGTGG...TGAACATCCAGAGGCGCACTCGTCTTCGGCTGGATGGGGGCCGAGAGGCTGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR CCA 90 bp | AGGGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGGACGCAGTGGCCATaGCAAGCAGCCCGGATGATC | + |
Preference number: 4 (lower is better) Translates to: RAHARAPPQNRYKGLAVEGTQWP*QAARMI Trigger: GATCATCCGGGCTGCTTGCCATGGCCACTGCGTCCC...TTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CAA 72 bp | GCACCCACACCAGTGCCATCTTCCGAACAGCCCGTCTaGTGTCCCCCTGCTGGGCCCGGTAGGAGACAGCTC | + |
Preference number: 4 (lower is better) Translates to: APTPVPSSEQPV*CPPAGPGRRQL Trigger: GAGCTGTCTCCTACCGGGCCCAGCAGGGGGACACAAGACGGGCTGTTCGGAAGATGGCACTGGTGTGGGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR GCA 90 bp | AATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGAGCGTGGCCTCTCAGTaGCCCTTGAGGAGCTGCCGG | + |
Preference number: 4 (lower is better) Translates to: NSDCADGASRAGLSSRAWSVASQ*PLRSCR Trigger: CCGGCAGCTCCTCAAGGGGCACTGAGAGGCCACGCT...CCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | CCACCCCCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCAGTGGCCCTCGGGGATaGAGCTGCCACCGGACAGGT | + |
Preference number: 4 (lower is better) Translates to: PPPNSDCADGASRAGLSSSGPRG*SCHRTG Trigger: ACCTGTCCGGTGGCAGCTCCATCCCCGAGGGCCACT...GGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGGGGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR TCA 90 bp | TGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTCCCACGAAGGCGAGCATaGCCAGCGCGTTGCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: WEPTPANPAPSSSAILSLPRRRA*PARCPA Trigger: TGCTGGGCAACGCGCTGGTCATGCTCGCCTTCGTGG...GAGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR GCA 90 bp | GCTGGAGGTGGCGAGGGTTGGGCATCAGGTGGGGGTTCTGGACCAGCCTCTCGGAGAAGTTGTTCTGGGTaGGGAGGCTCGAATCCGCCA | + |
Preference number: 4 (lower is better) Translates to: AGGGEGWASGGGSGPASRRSCSG*GGSNPP Trigger: TGGCGGATTCGAGCCTCCGCACCCAGAACAACTTCT...CCGAGAGGCTGGTCCAGAACCCCCACCTGATGCCCAACCCTCGCCACCTCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR CCA 90 bp | GTGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTATCAGGTGGGGGTTCTaGACCAGCCTCTCGGCCCCC | + |
Preference number: 4 (lower is better) Translates to: VGAHTCQSSPELLGNFVSIRWGF*TSLSAP Trigger: GGGGGCCGAGAGGCTGGTCCAGAACCCCCACCTGAT...AGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR GCA 90 bp | TTGAAGGGAGAGGGGGTTAGGAGCTGGGCTCCGGGATTAAGGAAGAGACAGCGGCCTCGGGGATGGAGCTaGCACCGGACAGGTACTCCC | + |
Preference number: 4 (lower is better) Translates to: LKGEGVRSWAPGLRKRQRPRGWS*HRTGTP Trigger: GGGAGTACCTGTCCGGTGGCAGCTCCATCCCCGAGG...CCGCTGTCTCTTCCTTAATCCCGGAGCCCAGCTCCTAACCCCCTCTCCCTTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR GCA 90 bp | AATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGCTCAACACCAGGGCCTaGCTCACCCACCCCATACCT | + |
Preference number: 4 (lower is better) Translates to: NSDCADGASRAGLSSRAWLNTRA*LTHPIP Trigger: AGGTATGGGGTGGGTGAGGCAGGCCCTGGTGTTGAG...CCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CAA 72 bp | TTCCAGCACTGCTCCAGGGAGCCATGGGGCTGGACCTaGAGCTTCTGGGGGCAGAGGAGCTTGGTGAAGGCT | + |
Preference number: 4 (lower is better) Translates to: FQHCSREPWGWT*SFWGQRSLVKA Trigger: AGCCTTCACCAAGCTCCTCTGCCCCCAGAAGCTCAAGGTCCAGCCCCATGGCTCCCTGGAGCAGTGCTGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR TCA 90 bp | GGAGGTGGAAGGCATGCCTGGGACTCCCGGATTGTCTCTTCTGGGGTGAAGGAGGCTTGGAGCCCCTTTTaGGTGAGCGTGGCCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: GGGRHAWDSRIVSSGVKEAWSPF*VSVASQ Trigger: CTGAGAGGCCACGCTCACTCAAAAGGGGCTCCAAGC...CTCCTTCACCCCAGAAGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | GGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGAGAAAGAAGTTGTTCTaGGTGCGGAGGCTCGAATCC | + |
Preference number: 4 (lower is better) Translates to: GPRSGSPSEQVQGPGRRRRKKLF*VRRLES Trigger: GGATTCGAGCCTCCGCACCCAGAACAACTTCTTTCT...CCTTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056480.10 ENSMUST00000166724.2 |
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CDS-3UTR CCA 90 bp | GTGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTACCTGTGCAATGGCATaGCCTCCCCGTGCCCCTTTG | + |
Preference number: 4 (lower is better) Translates to: VGAHTCQSSPELLGNFVSTCAMA*PPRAPL Trigger: CAAAGGGGCACGGGGAGGCCATGCCATTGCACAGGT...AGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR TCA 90 bp | ACACCAGGGCCTGCCTCACCCACCCCATACCTGTGCAATGGCATGGCCTCCCCGCGGAGATGGCGAGGTTaGGCAGAAAGAAGTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: TPGPASPTPYLCNGMASPRRWRG*AERSCS Trigger: AGAACAACTTCTTTCTGCTCAACCTCGCCATCTCCG...CGGGGAGGCCATGCCATTGCACAGGTATGGGGTGGGTGAGGCAGGCCCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR GCA 90 bp | AATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGAGAAGTTGTTCTGGGTaGGGAGGCTCGAATCCGCCA | + |
Preference number: 4 (lower is better) Translates to: NSDCADGASRAGLSSRAWRSCSG*GGSNPP Trigger: TGGCGGATTCGAGCCTCCGCACCCAGAACAACTTCT...CCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR GCA 90 bp | GCCCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCCCACCAGCCACAGCTTaGAGAGGCCCCGGCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: APDRLGREKVLQVCGGSGPPATA*RGPGQR Trigger: CCTTTGGCCGGGGCCTCTGCAAGCTGTGGCTGGTGG...GCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | CCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCGACAGCCGAAAGCGCTaGGTGATGCTTTGGGATACC | + |
Preference number: 4 (lower is better) Translates to: PNSDCADGASRAGLSSRADSRKR*VMLWDT Trigger: GGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTC...GGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | GGTTCTGGACCAGCCTCTCGGCCCCCATCCAGCCGAAGACGAGTGCGCCTCTGGATAGGGTACATACAATaGGATGCAGAAGGCACGAGG | + |
Preference number: 4 (lower is better) Translates to: GSGPASRPPSSRRRVRLWIGYIQ*DAEGTR Trigger: CCTCGTGCCTTCTGCATCCCATTGTATGTACCCTAT...CCAGAGGCGCACTCGTCTTCGGCTGGATGGGGGCCGAGAGGCTGGTCCAGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 72 bp | AAGGACGCTGAAGACGCTGATGGCTTGGAGCCCCTTTaGAGTGAGCGTGGCCTCTCAGTGCCCCTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: KDAEDADGLEPL*SERGLSVPLEE Trigger: CTCCTCAAGGGGCACTGAGAGGCCACGCTCACTCAAAAGGGGCTCCAAGCCATCAGCGTCTTCAGCGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR TCA 90 bp | GGAGGTGGAAGGCATGCCTGGGACTCCCGGATTGTCTCTTCTGGGGTGAAGGAGGCCGAAAGCGCTGGGTaGTGCTTTGGGATACCATCT | + |
Preference number: 4 (lower is better) Translates to: GGGRHAWDSRIVSSGVKEAESAG*CFGIPS Trigger: AGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGC...CTCCTTCACCCCAGAAGAGACAATCCGGGAGTCCCAGGCATGCCTTCCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | GCCCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCGGGTTGGGCATCAGGTaGGGGTTCTGGACCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: APDRLGREKVLQVCGGSGGLGIR*GFWTSL Trigger: GAGGCTGGTCCAGAACCCCCACCTGATGCCCAACCC...GCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | CCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGCCCATACCTGTGCAATaGCATGGCCTCCCCGTGCCC | + |
Preference number: 4 (lower is better) Translates to: PRSSWEREGIASVWWKWQPIPVQ*HGLPVP Trigger: GGGCACGGGGAGGCCATGCCATTGCACAGGTATGGG...CTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | TGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTCCGCTGGGTGATGCTTTaGGATACCATCTTCATGCGC | + |
Preference number: 4 (lower is better) Translates to: WEPTPANPAPSSSAILSLRWVML*DTIFMR Trigger: GCGCATGAAGATGGTATCCCAAAGCATCACCCAGCG...GAGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CAA 72 bp | ATGCGCTTCTCCAAGGACGCTGAAGACGCTGATGGCTaGGAGCCCCTTTTGAGTGAGCGTGGCCTCTCAGTG | + |
Preference number: 4 (lower is better) Translates to: MRFSKDAEDADG*EPLLSERGLSV Trigger: CACTGAGAGGCCACGCTCACTCAAAAGGGGCTCCAAGCCATCAGCGTCTTCAGCGTCCTTGGAGAAGCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 72 bp | CTTGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTaGGGATACCATCTTCATGCGCTTCTCCAAGGACGC | + |
Preference number: 4 (lower is better) Translates to: LVPRQPKALGDA*GYHLHALLQGR Trigger: GCGTCCTTGGAGAAGCGCATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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3UTR CAA 72 bp | CAGAGCCCAAAGATGCTCACGATGATAGCCAGCGACTaGGCTACCTTCTTGTCCCGCGACAGCCGAAAGCGC | + |
Preference number: 4 (lower is better) Translates to: QSPKMLTMIASD*ATFLSRDSRKR Trigger: GCGCTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAAGTCGCTGGCTATCATCGTGAGCATCTTTGGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR GCA 90 bp | CGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGGTGTGTGCAGCACCCACACCAGTaGCATCTTCCGAACAGCCCG | + |
Preference number: 4 (lower is better) Translates to: RLGREKVLQVCGGSGRCVQHPHQ*HLPNSP Trigger: CGGGCTGTTCGGAAGATGGCACTGGTGTGGGTGCTG...CACACACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR GCA 90 bp | TTAGGGAGGACACCAACCACTAAGTATGCAAAGGAGGACATCACTGGCACTGCACCCACCCCATACCTGTaGAATGGCATGGCCTCCCCG | + |
Preference number: 4 (lower is better) Translates to: LGRTPTTKYAKEDITGTAPTPYL*NGMASP Trigger: CGGGGAGGCCATGCCATTGCACAGGTATGGGGTGGG...TGCAGTGCCAGTGATGTCCTCCTTTGCATACTTAGTGGTTGGTGTCCTCCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | GGCGCATTGCCAGGGCAGGAGCTGGGAGCACACACCAAGGTTTGCATTAGGGAGATAGGGTACATACAATaGGATGCAGAAGGCACCCAC | + |
Preference number: 4 (lower is better) Translates to: GALPGQELGAHTKVCIREIGYIQ*DAEGTH Trigger: GTGGGTGCCTTCTGCATCCCATTGTATGTACCCTAT...CTCCCTAATGCAAACCTTGGTGTGTGCTCCCAGCTCCTGCCCTGGCAATGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | CATCGCCCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGACCTTGAGCTTCTaGGGGCAGAGGAGCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: HRPRSSWEREGIASVWWKWTLSF*GQRSLV Trigger: CACCAAGCTCCTCTGCCCCCAGAAGCTCAAGGTCCA...CTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CAA 72 bp | AGACAGCGGCAGCAAAGGGCATCGCCCCAGATCGTCTaGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAA | + |
Preference number: 4 (lower is better) Translates to: RQRQQRASPQIV*GERRYCKCVVE Trigger: TTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGCGATGCCCTTTGCTGCCGCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR TCA 90 bp | GCCCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCCGGAGATGGCGAGGTTaGGCAGAAAGAAGTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: APDRLGREKVLQVCGGSGRRWRG*AERSCS Trigger: AGAACAACTTCTTTCTGCTCAACCTCGCCATCTCCG...GCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CCA 90 bp | CTTGTCCCGCGACAGCCGAAAGCGCTGGGTGATGCTTTGGGATACCATCTTCATAGAAAGAAGTTGTTCTaGGTGCGGAGGCTCGAATCC | + |
Preference number: 4 (lower is better) Translates to: LVPRQPKALGDALGYHLHRKKLF*VRRLES Trigger: GGATTCGAGCCTCCGCACCCAGAACAACTTCTTTCT...ATGAAGATGGTATCCCAAAGCATCACCCAGCGCTTTCGGCTGTCGCGGGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR GCA 90 bp | TTAGGGAGGACACCAACCACTAAGTATGCAAAGGAGGACATCACTGGCACTGCAGGGATACCATCTTCATaGGCTTCTCCAAGGACGCTG | + |
Preference number: 4 (lower is better) Translates to: LGRTPTTKYAKEDITGTAGIPSS*ASPRTL Trigger: CAGCGTCCTTGGAGAAGCGCATGAAGATGGTATCCC...TGCAGTGCCAGTGATGTCCTCCTTTGCATACTTAGTGGTTGGTGTCCTCCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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3UTR CAA 72 bp | ACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTaGTCTCTCTTGATTAAACATCCAAGGAACATCAAG | + |
Preference number: 4 (lower is better) Translates to: TPANPAPSSSAI*SLLIKHPRNIK Trigger: CTTGATGTTCCTTGGATGTTTAATCAAGAGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR TCA 90 bp | TTGATTAAACATCCAAGGAACATCAAGTTCACAGACTTGATGTTTTCTTCTCCTGGAGCCCCTTTTGAGTaGGCGTGGCCTCTCAGTGCC | + |
Preference number: 4 (lower is better) Translates to: LIKHPRNIKFTDLMFSSPGAPFE*AWPLSA Trigger: GGCACTGAGAGGCCACGCTCACTCAAAAGGGGCTCC...AGGAGAAGAAAACATCAAGTCTGTGAACTTGATGTTCCTTGGATGTTTAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | AATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTGGTGGAGGTGGCGAGGGTaGGGCATCAGGTGGGGGTTC | + |
Preference number: 5 (lower is better) Translates to: NSDCADGASRAGLSSRAWWRWRG*GIRWGF Trigger: GAACCCCCACCTGATGCCCAACCCTCGCCACCTCCA...CCAGGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | GGCCCACGCTCGGGCTCCCCCTCAGAACAGGTACAAGGGCCTGGCCGTAGAAGGGACTTGGCTACCTTCTaGTCCCGCGACAGCCGAAAG | + |
Preference number: 5 (lower is better) Translates to: GPRSGSPSEQVQGPGRRRDLATF*SRDSRK Trigger: CTTTCGGCTGTCGCGGGACAAGAAGGTAGCCAAGTC...CCTTCTACGGCCAGGCCCTTGTACCTGTTCTGAGGGGGAGCCCGAGCGTGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | CCACCCCCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCCATGGGGCTGGACCTaGAGCTTCTGGGGGCAGAGG | + |
Preference number: 5 (lower is better) Translates to: PPPNSDCADGASRAGLSSPWGWT*SFWGQR Trigger: CCTCTGCCCCCAGAAGCTCAAGGTCCAGCCCCATGG...GGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGGGGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | GGTGGGGGTTCTGGACCAGCCTCTCGGCCCCCATCCAGCCGAAGACGAGTGCGCTTGAGCAGAAAGAAGTaGTTCTGGGTGCGGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: GGGSGPASRPPSSRRRVRLSRKK*FWVRRL Trigger: GAGCCTCCGCACCCAGAACAACTTCTTTCTGCTCAA...GCGCACTCGTCTTCGGCTGGATGGGGGCCGAGAGGCTGGTCCAGAACCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR CAA 90 bp | TGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTCGGGTTGACGGCCGAGTaGGCCCACAGAAGCCAGAAG | + |
Preference number: 5 (lower is better) Translates to: WEPTPANPAPSSSAILSLGLTAE*AHRSQK Trigger: CTTCTGGCTTCTGTGGGCCAACTCGGCCGTCAACCC...GAGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS GCA 90 bp | AGACTGAGGAGGCACACAGTAGGTAGTCTACCACCAGCCACAGCTTaGAGAGGCCCCGGCCAAAGGTCCAACGGCCGGTCAGCACATAGG | + |
Preference number: 5 (lower is better) Translates to: RLRRHTVGSLPPATA*RGPGQRSNGRSAHR Trigger: CCTATGTGCTGACCGGCCGTTGGACCTTTGGCCGGGGCCTCTGCAAGCTGTGGCTGGTGGTAGACTACCTACTGTGTGCCTCCTCAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056480.10 ENSMUST00000163215.8 ENSMUST00000164442.2 ENSMUST00000165248.8 ENSMUST00000165762.8 ENSMUST00000171736.8 |
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CDS-3UTR CAA 90 bp | GCCCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCTCCGAACAGCCCGTCTaGTGTCCCCCTGCTGGGCCC | + |
Preference number: 5 (lower is better) Translates to: APDRLGREKVLQVCGGSGSEQPV*CPPAGP Trigger: GGGCCCAGCAGGGGGACACAAGACGGGCTGTTCGGA...GCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS CCA 90 bp | TTCCAGCACTGCTCCAGGGAGCCATGGGGCTGGACCTTGAGCTTCTaGGGGCAGAGGAGCTTGGTGAAGGCTCTACGGAAGCTGTGCAAT | + |
Preference number: 5 (lower is better) Translates to: FQHCSREPWGWTLSF*GQRSLVKALRKLCN Trigger: ATTGCACAGCTTCCGTAGAGCCTTCACCAAGCTCCTCTGCCCCCAGAAGCTCAAGGTCCAGCCCCATGGCTCCCTGGAGCAGTGCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171736.8 |
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CDS-3UTR CAA 90 bp | CTGAGGAAGGGTGTGAAGAACTCGAGGGTGGAGGCCGTGATGAGAAAGTACCAGAGCATGACCAGCGCGTaGCCCAGCACTGTGGCCACG | + |
Preference number: 5 (lower is better) Translates to: LRKGVKNSRVEAVMRKYQSMTSA*PSTVAT Trigger: CGTGGCCACAGTGCTGGGCAACGCGCTGGTCATGCT...CTGGTACTTTCTCATCACGGCCTCCACCCTCGAGTTCTTCACACCCTTCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |
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CDS-3UTR CAA 90 bp | GGTGAAGGAGAATGTGGCGGCAAAGCCAGCCAGCACACTCCAGTTCCACCAACGGGCTTGGAGCCCCTTTaGAGTGAGCGTGGCCTCTCA | + |
Preference number: 5 (lower is better) Translates to: GEGECGGKASQHTPVPPTGLEPL*SERGLS Trigger: TGAGAGGCCACGCTCACTCAAAAGGGGCTCCAAGCC...CGTTGGTGGAACTGGAGTGTGCTGGCTGGCTTTGCCGCCACATTCTCCTTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | CCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGAGCATGACCAGCGCGTaGCCCAGCACTGTGGCCACG | + |
Preference number: 5 (lower is better) Translates to: PRSSWEREGIASVWWKWQSMTSA*PSTVAT Trigger: CGTGGCCACAGTGCTGGGCAACGCGCTGGTCATGCT...CTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | CCAAATTCTGACTGCGCAGATGGGGCAAGCAGGGCAGGGCTATCGTCCCGAGCCTTGAGCAGAAAGAAGTaGTTCTGGGTGCGGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: PNSDCADGASRAGLSSRALSRKK*FWVRRL Trigger: GAGCCTCCGCACCCAGAACAACTTCTTTCTGCTCAA...GGCTCGGGACGATAGCCCTGCCCTGCTTGCCCCATCTGCGCAGTCAGAATTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | CGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGGTGTGTGACCACCAGCCACAGCTaGCAGAGGCCCCGGCCAAAG | + |
Preference number: 5 (lower is better) Translates to: RLGREKVLQVCGGSGRCVTTSHS*QRPRPK Trigger: CTTTGGCCGGGGCCTCTGCAAGCTGTGGCTGGTGGT...CACACACCTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | TGGGAGCCCACACCTGCCAATCCAGCCCCGAGCTCCTCGGCAATTTTGTCTCTCGCGCTGGGTGATGCTTaGGGATACCATCTTCATGCG | + |
Preference number: 5 (lower is better) Translates to: WEPTPANPAPSSSAILSLALGDA*GYHLHA Trigger: CGCATGAAGATGGTATCCCAAAGCATCACCCAGCGC...GAGAGACAAAATTGCCGAGGAGCTCGGGGCTGGATTGGCAGGTGTGGGCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | CCCAGATCGTCTTGGGAGAGAGAAGGTATTGCAAGTGTGTGGTGGAAGTGGCAGTGGGGGCAGAGGAGCTaGGTGAAGGCTCTACGGAAG | + |
Preference number: 5 (lower is better) Translates to: PRSSWEREGIASVWWKWQWGQRS*VKALRK Trigger: CTTCCGTAGAGCCTTCACCAAGCTCCTCTGCCCCCA...CTGCCACTTCCACCACACACTTGCAATACCTTCTCTCTCCCAAGACGATCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS-3UTR CAA 90 bp | TTAGGGAGGACACCAACCACTAAGTATGCAAAGGAGGACATCACTGGCACTGCACTGATCAGCACGATGTaGAAGACTGAGGAGGCACAC | + |
Preference number: 5 (lower is better) Translates to: LGRTPTTKYAKEDITGTALISTM*KTEEAH Trigger: GTGTGCCTCCTCAGTCTTCAACATCGTGCTGATCAG...TGCAGTGCCAGTGATGTCCTCCTTTGCATACTTAGTGGTTGGTGTCCTCCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056480.10 |
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CDS GCA 72 bp | AGGCACACAGTAGGTAGTCTACCACCAGCCACAGCTTaGAGAGGCCCCGGCCAAAGGTCCAACGGCCGGTCA | + |
Preference number: 6 (lower is better) Translates to: RHTVGSLPPATA*RGPGQRSNGRS Trigger: TGACCGGCCGTTGGACCTTTGGCCGGGGCCTCTGCAAGCTGTGGCTGGTGGTAGACTACCTACTGTGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056480.10 ENSMUST00000163215.8 ENSMUST00000164442.2 ENSMUST00000165248.8 ENSMUST00000165762.8 ENSMUST00000171736.8 |
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CDS CAA 90 bp | TCCATCTTCTTCCAGCACTGCTCCAGGGAGCCATGGGGCTGGACCTaGAGCTTCTGGGGGCAGAGGAGCTTGGTGAAGGCTCTACGGAAG | + |
Preference number: 6 (lower is better) Translates to: SIFFQHCSREPWGWT*SFWGQRSLVKALRK Trigger: CTTCCGTAGAGCCTTCACCAAGCTCCTCTGCCCCCAGAAGCTCAAGGTCCAGCCCCATGGCTCCCTGGAGCAGTGCTGGAAGAAGATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165248.8 ENSMUST00000165762.8 |
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CDS CCA 72 bp | TCGGAGATGGCGAGGTTGAGCAGAAAGAAGTTGTTCTaGGTGCGGAGGCTCGAATCCGCCACGAAGGCGAGC | + |
Preference number: 6 (lower is better) Translates to: SEMARLSRKKLF*VRRLESATKAS Trigger: GCTCGCCTTCGTGGCGGATTCGAGCCTCCGCACCCAGAACAACTTCTTTCTGCTCAACCTCGCCATCTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000056480.10 ENSMUST00000163215.8 ENSMUST00000164442.2 ENSMUST00000165248.8 ENSMUST00000165762.8 ENSMUST00000166724.2 ENSMUST00000171736.8 |
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CDS CAA 90 bp | ATACAATGGGATGCAGAAGGCACGAGGAAGTCGGAGATGGCGAGGTaGAGCAGAAAGAAGTTGTTCTGGGTGCGGAGGCTCGAATCCGCC | + |
Preference number: 6 (lower is better) Translates to: IQWDAEGTRKSEMAR*SRKKLFWVRRLESA Trigger: GGCGGATTCGAGCCTCCGCACCCAGAACAACTTCTTTCTGCTCAACCTCGCCATCTCCGACTTCCTCGTGCCTTCTGCATCCCATTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166724.2 |