RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HRH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034987

Ensembl transcript IDs: ENSMUST00000038101.4, ENSMUST00000209846.2, ENSMUST00000211742.2

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAGTGGCTCCCCCAGTTGCTCCTTTGAGGGTCCTTCTGGGTGTTaGTGGAGGAAACGAAGCCTCCACAGGCTCTTGCAGCAGCTTAGG +
Preference number: 1 (lower is better)
Translates to: DSGSPSCSFEGPSGC*WRKRSLHRLLQQLR
Trigger: CCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 90 bp AAGGAGTCGTTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTaGGGACTGGCAGTGCTCCAGTGTCCCTCAAGCTTTTCAGGGATG +
Preference number: 1 (lower is better)
Translates to: KESFWRRGPLGGAAT*GLAVLQCPSSFSGM
Trigger: CATCCCTGAAAAGCTTGAGGGACACTGGAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAACGACTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 90 bp AGTGGCTCCCCCAGTTGCTCCTTTGAGGGTCCTTCTGGGTGTTGCTaGAGGAAACGAAGCCTCCACAGGCTCTTGCAGCAGCTTAGGAGG +
Preference number: 1 (lower is better)
Translates to: SGSPSCSFEGPSGCC*RKRSLHRLLQQLRR
Trigger: CCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 90 bp GTACAGTCAGGCACTTCCCCGCCATCTCTCTTGAATGGCAGTCGGTaGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACC +
Preference number: 1 (lower is better)
Translates to: VQSGTSPPSLLNGSR*VMVVCGQSVLQHCT
Trigger: GGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCGACTGCCATTCAAGAGAGATGGCGGGGAAGTGCCTGACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 90 bp CGCACACGCTCCTGTGACCCCAGGAAACCCATCAACATGCTTGTCTaGCCCTGGGTGGATGGACTTGTATCCCTGGACTCTTTCTGCCCT +
Preference number: 1 (lower is better)
Translates to: RTRSCDPRKPINMLV*PWVDGLVSLDSFCP
Trigger: AGGGCAGAAAGAGTCCAGGGATACAAGTCCATCCACCCAGGGCCAGACAAGCATGTTGATGGGTTTCCTGGGGTCACAGGAGCGTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR GCA 90 bp CCAACACTGTACCGTGCACAGTCTTATGTGGGCTGTGAGGTAGTGTaGCCTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAG +
Preference number: 1 (lower is better)
Translates to: PTLYRAQSYVGCEVV*PVPCGFSMGHTQDK
Trigger: CTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAGGGCACACTACCTCACAGCCCACATAAGACTGTGCACGGTACAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR TCA 90 bp TCAAGCTTTTCAGGGATGCAGCTGTTGGAATCGCACACGCTCCTGTaGCCCCAGGAAACCCATCAACATGCTTGTCTGGCCCTGGGTGGA +
Preference number: 1 (lower is better)
Translates to: SSFSGMQLLESHTLL*PQETHQHACLALGG
Trigger: TCCACCCAGGGCCAGACAAGCATGTTGATGGGTTTCCTGGGGTCACAGGAGCGTGTGCGATTCCAACAGCTGCATCCCTGAAAAGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR GCA 90 bp CTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTTGTaGATAAGCGATGTCCTGACCTGGCCCTGTTCTGGCACTTGTAGC +
Preference number: 1 (lower is better)
Translates to: LPVCKAGVLACRVTL*ISDVLTWPCSGTCS
Trigger: GCTACAAGTGCCAGAACAGGGCCAGGTCAGGACATCGCTTATGCACAAGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 90 bp CCTGTGACCCCAGGAAACCCATCAACATGCTTGTCTGGCCCTGGGTaGATGGACTTGTATCCCTGGACTCTTTCTGCCCTTTGTGTCTGG +
Preference number: 1 (lower is better)
Translates to: PVTPGNPSTCLSGPG*MDLYPWTLSALCVW
Trigger: CCAGACACAAAGGGCAGAAAGAGTCCAGGGATACAAGTCCATCCACCCAGGGCCAGACAAGCATGTTGATGGGTTTCCTGGGGTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 90 bp GTGTGTTCTGTGAGCCTCCAGGCTCAGGCTGAAGTTTGTCCTCAGTaGTTTGGTGGGGCTTGGTATACAGGGGCTCCAGAAAGGAGATCC +
Preference number: 1 (lower is better)
Translates to: VCSVSLQAQAEVCPQ*FGGAWYTGAPERRS
Trigger: GGATCTCCTTTCTGGAGCCCCTGTATACCAAGCCCCACCAAACCACTGAGGACAAACTTCAGCCTGAGCCTGGAGGCTCACAGAACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 90 bp TGTGATGGTGTCCTTTCTGTCTCTTCAGACAGTGGCTCCCCCAGTTaGTCCTTTGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGC +
Preference number: 1 (lower is better)
Translates to: CDGVLSVSSDSGSPS*SFEGPSGCCWRKRS
Trigger: GCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACTGTCTGAAGAGACAGAAAGGACACCATCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 90 bp TACAGGGGCTCCAGAAAGGAGATCCAAGTGATAAGGCCAGCATCTTaGTGTCCTGGGCAGGATCTAGACAGCCTCATAGGACAACAGCCC +
Preference number: 1 (lower is better)
Translates to: YRGSRKEIQVIRPAS*CPGQDLDSLIGQQP
Trigger: GGGCTGTTGTCCTATGAGGCTGTCTAGATCCTGCCCAGGACACCAAGATGCTGGCCTTATCACTTGGATCTCCTTTCTGGAGCCCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR TCA 90 bp ATTGGAACATGGAAACACAGAATGGACTTGAAGTTCCACCTCGGCTaGTGCTCCCCCAGGCTTCATGCACCCCGTTTGTGCTGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: IGTWKHRMDLKFHLG*CSPRLHAPRLCCQE
Trigger: TTCCTGGCAGCACAAACGGGGTGCATGAAGCCTGGGGGAGCATCAGCCGAGGTGGAACTTCAAGTCCATTCTGTGTTTCCATGTTCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 90 bp CAGGATCTAGACAGCCTCATAGGACAACAGCCCCATTCCTTCCTGTaGTGGTGTCCTTTCTGTCTCTTCAGACAGTGGCTCCCCCAGTTG +
Preference number: 1 (lower is better)
Translates to: QDLDSLIGQQPHSFL*WCPFCLFRQWLPQL
Trigger: CAACTGGGGGAGCCACTGTCTGAAGAGACAGAAAGGACACCATCACAGGAAGGAATGGGGCTGTTGTCCTATGAGGCTGTCTAGATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR GCA 90 bp CCCCGTTTGTGCTGCCAGGAAAGGCTCCAGAAGAAAGTTTACATGTaGAGGAATCTTCTGATGTGGCAGGTTGTCCCTGGGCACTGTGGT +
Preference number: 1 (lower is better)
Translates to: PRLCCQERLQKKVYM*RNLLMWQVVPGHCG
Trigger: ACCACAGTGCCCAGGGACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCTTTCCTGGCAGCACAAACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 90 bp AATGGACTTGAAGTTCCACCTCGGCTGATGCTCCCCCAGGCTTCATaGACCCCGTTTGTGCTGCCAGGAAAGGCTCCAGAAGAAAGTTTA +
Preference number: 1 (lower is better)
Translates to: NGLEVPPRLMLPQAS*TPFVLPGKAPEESL
Trigger: TAAACTTTCTTCTGGAGCCTTTCCTGGCAGCACAAACGGGGTGCATGAAGCCTGGGGGAGCATCAGCCGAGGTGGAACTTCAAGTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 90 bp GGGTGGATGGACTTGTATCCCTGGACTCTTTCTGCCCTTTGTGTCTaGGATGAATTGAAAGCAGTACAGTCAGGCACTTCCCCGCCATCT +
Preference number: 1 (lower is better)
Translates to: GWMDLYPWTLSALCV*DELKAVQSGTSPPS
Trigger: AGATGGCGGGGAAGTGCCTGACTGTACTGCTTTCAATTCATCCCAGACACAAAGGGCAGAAAGAGTCCAGGGATACAAGTCCATCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 90 bp AGCCAATGGCTTCTACATAAAGTCCCATGGTGTGTGGCAAGGGCCTaGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGG +
Preference number: 1 (lower is better)
Translates to: SQWLLHKVPWCVARA*YRKGQNRQGGNPQG
Trigger: CCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCACACACCATGGGACTTTATGTAGAAGCCATTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 90 bp GGAAACGAAGCCTCCACAGGCTCTTGCAGCAGCTTAGGAGGTTATTaGAGCATATGGTGCAAGACAATGCTGTTTTCCCCAGAGGCTGGA +
Preference number: 1 (lower is better)
Translates to: GNEASTGSCSSLGGY*SIWCKTMLFSPEAG
Trigger: TCCAGCCTCTGGGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR TCA 90 bp GCCAGGAAAGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTaGTGTGGCAGGTTGTCCCTGGGCACTGTGGTCTTGAGTCTGACT +
Preference number: 1 (lower is better)
Translates to: ARKGSRRKFTCAGIF*CGRLSLGTVVLSLT
Trigger: AGTCAGACTCAAGACCACAGTGCCCAGGGACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCTTTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 90 bp GAAAGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTaGCAGGTTGTCCCTGGGCACTGTGGTCTTGAGTCTGACTGGCTG +
Preference number: 1 (lower is better)
Translates to: ERLQKKVYMCRNLLM*QVVPGHCGLESDWL
Trigger: CAGCCAGTCAGACTCAAGACCACAGTGCCCAGGGACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 90 bp GATGGACTTGTATCCCTGGACTCTTTCTGCCCTTTGTGTCTGGGATaGATTGAAAGCAGTACAGTCAGGCACTTCCCCGCCATCTCTCTT +
Preference number: 1 (lower is better)
Translates to: DGLVSLDSFCPLCLG*IESSTVRHFPAISL
Trigger: AAGAGAGATGGCGGGGAAGTGCCTGACTGTACTGCTTTCAATTCATCCCAGACACAAAGGGCAGAAAGAGTCCAGGGATACAAGTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR TCA 90 bp GGCTCACTGCTATTTCTGCAGGAGCAGGACCAGCTCTTTTACAGGTaGGAAAATTGGGTCTCTGAGAAAGATGTGACCTTCTCAGAGTCG +
Preference number: 1 (lower is better)
Translates to: GSLLFLQEQDQLFYR*ENWVSEKDVTFSES
Trigger: CGACTCTGAGAAGGTCACATCTTTCTCAGAGACCCAATTTTCTCACCTGTAAAAGAGCTGGTCCTGCTCCTGCAGAAATAGCAGTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR GCA 90 bp TTTTCTGCTCACATTGAGACCTCGCAGGGAAGCGAGGCTTCTCAGTaGTTTATGATAGTATCCTTTGCCCTGCTTGGCAGATGTGCATGT +
Preference number: 1 (lower is better)
Translates to: FSAHIETSQGSEASQ*FMIVSFALLGRCAC
Trigger: ACATGCACATCTGCCAAGCAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTTCCCTGCGAGGTCTCAATGTGAGCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 90 bp ACTCCTAGGGCCAGCACCAACATGAGCTTTGAACCCAAGGAATTCTaGCTAAGGATTTTAACCTGTCTGAAATCTGCTCCCAGGGAAGAT +
Preference number: 1 (lower is better)
Translates to: TPRASTNMSFEPKEF*LRILTCLKSAPRED
Trigger: ATCTTCCCTGGGAGCAGATTTCAGACAGGTTAAAATCCTTAGGCAGAATTCCTTGGGTTCAAAGCTCATGTTGGTGCTGGCCCTAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 90 bp ACTCTTCCAGAGACCCAACAGGCAAAGGTCAGCAGAAGGAACTCATaGATAGAGGAGGAAGATAGTGTCCAAGAAACCACAGCTGACTAT +
Preference number: 1 (lower is better)
Translates to: TLPETQQAKVSRRNS*IEEEDSVQETTADY
Trigger: ATAGTCAGCTGTGGTTTCTTGGACACTATCTTCCTCCTCTATGCATGAGTTCCTTCTGCTGACCTTTGCCTGTTGGGTCTCTGGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 90 bp ACTCACCTGCCATTGGCTCCCAAGAAGATGTCTAAGTGGGTCTCTTaGGCTTTCAGAGGGAATTTGATAAAGATACTCAGTGGTCATCTC +
Preference number: 1 (lower is better)
Translates to: THLPLAPKKMSKWVS*AFRGNLIKILSGHL
Trigger: GAGATGACCACTGAGTATCTTTATCAAATTCCCTCTGAAAGCCCAAGAGACCCACTTAGACATCTTCTTGGGAGCCAATGGCAGGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 90 bp CAAATTCATTGTATCTGCCTCTACACACTAAGCAACTCATCAGGATaGAAACCACGTTCCCCATTGCCACTGCCAGAGATTCTTGACACG +
Preference number: 1 (lower is better)
Translates to: QIHCICLYTLSNSSG*KPRSPLPLPEILDT
Trigger: CGTGTCAAGAATCTCTGGCAGTGGCAATGGGGAACGTGGTTTTCATCCTGATGAGTTGCTTAGTGTGTAGAGGCAGATACAATGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 90 bp AAGCGAGGCTTCTCAGTGCTTTATGATAGTATCCTTTGCCCTGCTTaGCAGATGTGCATGTTTTCTATAGAAGCACGTCCATGTACACCT +
Preference number: 1 (lower is better)
Translates to: KRGFSVLYDSILCPA*QMCMFSIEARPCTP
Trigger: AGGTGTACATGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 90 bp CAAGGAGGAAATCCCCAAGGGAATGGTATTTTCGATGAGATCTCATaGTGTCAAGTTGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGG +
Preference number: 1 (lower is better)
Translates to: QGGNPQGNGIFDEIS*CQVVQKRKEHLRSW
Trigger: CCATGACCTCAAATGCTCCTTTCTCTTCTGGACAACTTGACATCATGAGATCTCATCGAAAATACCATTCCCTTGGGGATTTCCTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 90 bp TTCTCAGTGCTTTATGATAGTATCCTTTGCCCTGCTTGGCAGATGTaGATGTTTTCTATAGAAGCACGTCCATGTACACCTGTGTATCCA +
Preference number: 1 (lower is better)
Translates to: FSVLYDSILCPAWQM*MFSIEARPCTPVYP
Trigger: TGGATACACAGGTGTACATGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACTATCATAAAGCACTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 90 bp GTGGGTCTCTTGGGCTTTCAGAGGGAATTTGATAAAGATACTCAGTaGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTTGAAGTTT +
Preference number: 1 (lower is better)
Translates to: VGLLGFQREFDKDTQ*SSLGVIRPNYSLKF
Trigger: AAACTTCAAGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAAATTCCCTCTGAAAGCCCAAGAGACCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 90 bp TCAGAACAGACAAGGAGGAAATCCCCAAGGGAATGGTATTTTCGATaGGATCTCATGATGTCAAGTTGTCCAGAAGAGAAAGGAGCATTT +
Preference number: 1 (lower is better)
Translates to: SEQTRRKSPREWYFR*DLMMSSCPEEKGAF
Trigger: AAATGCTCCTTTCTCTTCTGGACAACTTGACATCATGAGATCTCATCGAAAATACCATTCCCTTGGGGATTTCCTCCTTGTCTGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTGCTCATGGCAGTCGGTGGGTaGTGGTGGTGTGTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: FWRRGPLGGAATWGLAVLMAVGG*WWCVGS
Trigger: ACTGCCCACACACCACCATCACCCACCGACTGCCAT...GAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CCA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGAGGACATGGCGGGGGTTaGGGGTGGGCGTGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGGHGGG*GWAWRR
Trigger: CCGCCTCCACGCCCACCCCCAACCCCCGCCATGTCC...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp CGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCACAGCGATGTCCTGACCTaGCCCTGTTCTGGCACTTGT +
Preference number: 2 (lower is better)
Translates to: RWVMVVCGQSVLQHCTVHSDVLT*PCSGTC
Trigger: ACAAGTGCCAGAACAGGGCCAGGTCAGGACATCGCT...GTGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CCA 90 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTGCTCCTACTTATGGTTGCGTaGCAATCCCTGCCACCCTTC +
Preference number: 2 (lower is better)
Translates to: FWRRGPLGGAATWGLAVLLLMVA*QSLPPF
Trigger: GAAGGGTGGCAGGGATTGCCACGCAACCATAAGTAG...GAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CCA 90 bp CATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCCACAGATATCCCCAGAGGCTGGAGGTaGGGCGAGTCCTGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: HGRATAMRSPRGEKSTDIPRGWR*GESCSD
Trigger: GTCACTGCAGGACTCGCCCCACCTCCAGCCTCTGGG...GATATCTGTGGACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GCAAAGCAGGAAGCTGGAGGAACATGGAAGCTGACAAGGCCAGGTTGGCGGGCTGGCAGGAGAGGGTCTTaGAAACCCAAGGAAACCTGG +
Preference number: 2 (lower is better)
Translates to: AKQEAGGTWKLTRPGWRAGRRGS*KPKETW
Trigger: CCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCC...AGCCCGCCAACCTGGCCTTGTCAGCTTCCATGTTCCTCCAGCTTCCTGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCGGGCCAGCACCAACATaGGCTTTGAACCCAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GVLGERSPQISSSLWGSRGPAPT*ALNPRN
Trigger: ATTCCTTGGGTTCAAAGCTCATGTTGGTGCTGGCCC...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 90 bp AGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTaGTGCATAAGCGATGTCCTGACCTGGCCCTGTTCTGGCACTTGT +
Preference number: 2 (lower is better)
Translates to: RLPVCKAGVLACRVT*CISDVLTWPCSGTC
Trigger: ACAAGTGCCAGAACAGGGCCAGGTCAGGACATCGCTTATGCACAAGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 90 bp GGAATCGCACACGCTCCTGTGACCCCAGGAAACCCATCAACATGCTaGTCTGGCCCTGGGTGGATGGACTTGTATCCCTGGACTCTTTCT +
Preference number: 2 (lower is better)
Translates to: GIAHAPVTPGNPSTC*SGPGWMDLYPWTLS
Trigger: AGAAAGAGTCCAGGGATACAAGTCCATCCACCCAGGGCCAGACAAGCATGTTGATGGGTTTCCTGGGGTCACAGGAGCGTGTGCGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 90 bp GTGTCCTTTCTGTCTCTTCAGACAGTGGCTCCCCCAGTTGCTCCTTaGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGCCTCCACA +
Preference number: 2 (lower is better)
Translates to: VSFLSLQTVAPPVAP*RVLLGVAGGNEAST
Trigger: TGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACTGTCTGAAGAGACAGAAAGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp TGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGTGCTCTCTCTGCTCATaGCTCCTAGGGCCAGCACCA +
Preference number: 2 (lower is better)
Translates to: WQGPGIGRVRTDKEEIPKCSLCS*LLGPAP
Trigger: TGGTGCTGGCCCTAGGAGTCATGAGCAGAGAGAGCA...CTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp CGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCACTGGCTCCTAGCACTCTaGTGTAAACAGCTTCAGTGT +
Preference number: 2 (lower is better)
Translates to: RWVMVVCGQSVLQHCTVHWLLAL*CKQLQC
Trigger: ACACTGAAGCTGTTTACAGCAGAGTGCTAGGAGCCA...GTGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR TCA 90 bp GGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAAGGAGGCCAACTCCACCTCCTTaGATCTCTCAGTCATTCTCT +
Preference number: 2 (lower is better)
Translates to: GGGRRGSWKPKETWVSRRPTPPP*ISQSFS
Trigger: AGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGG...CCTCCTTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCTATGGTGCAAGACAATaGTGTTTTCCCCAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GVLGERSPQISSSLWGSRYGARQ*CFPQRL
Trigger: CAGCCTCTGGGGAAAACAGCATTGTCTTGCACCATA...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp CATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCCACAGATATCAGTGGCTCCCCCAGTTaGTCCTTTGAGGGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HGRATAMRSPRGEKSTDISGSPS*SFEGPS
Trigger: AGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACT...GATATCTGTGGACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GAGTTGAGGTCATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCCCCAGACATACTTTCTaGCTGAGTGGCCTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: ELRSWKGNSNEESSGREVPRHTF*LSGLRY
Trigger: GTACCTCAGGCCACTCAGCCAGAAAGTATGTCTGGG...GACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATGACCTCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTTCTCTGAGAAAGATGTaGCCTTCTCAGAGTCGCCGG +
Preference number: 2 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGSLRKM*PSQSRR
Trigger: CCGGCGACTCTGAGAAGGTCACATCTTTCTCAGAGA...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR TCA 90 bp GTGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGCCAGCACCAACATaGGCTTTGAACCCAAGGAAT +
Preference number: 2 (lower is better)
Translates to: VARAWYRKGQNRQGGNPQGPAPT*ALNPRN
Trigger: ATTCCTTGGGTTCAAAGCTCATGTTGGTGCTGGCCC...TTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCTATGATAGTATCCTTTaGCCTGCTTGGCAGATGTGC +
Preference number: 2 (lower is better)
Translates to: GVLGERSPQISSSLWGSRYDSIL*PAWQMC
Trigger: GCACATCTGCCAAGCAGGGCAAAGGATACTATCATA...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGAAACCACATAAAAGGTaGACATGGCGGGGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: WQGPGIGRVRTDKEEIPKKPHKR*TWRGLG
Trigger: CCCCAACCCCCGCCATGTCCACCTTTTATGTGGTTT...CTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGATTCCAGTTGTCCCGATaGAGACTACAGCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGFQLSR*RLQQQG
Trigger: ACCCTGCTGCTGTAGTCTCCATCGGGACAACTGGAA...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 90 bp AGGAAACGAAGCCTCCACAGGCTCTTGCAGCAGCTTAGGAGGTTATaGGAGCATATGGTGCAAGACAATGCTGTTTTCCCCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RKRSLHRLLQQLRRL*EHMVQDNAVFPRGW
Trigger: CCAGCCTCTGGGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CAA 90 bp GGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGCCTCCACAGGCTCTaGCAGCAGCTTAGGAGGTTATTGGAGCATATGGTGCAAGACAAT +
Preference number: 2 (lower is better)
Translates to: GPSGCCWRKRSLHRL*QQLRRLLEHMVQDN
Trigger: ATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTAACCACGTTCCCCATTaGCACTGCCAGAGATTCTTG +
Preference number: 2 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGNHVPH*HCQRFL
Trigger: CAAGAATCTCTGGCAGTGGCAATGGGGAACGTGGTT...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CCA 90 bp GAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCTTAGTTAGGTGTCCATaGAGGGCAATTTCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: ESSGREVHRYPLLSGALALVRCP*RAISFL
Trigger: GAGGAAAGAAATTGCCCTCCATGGACACCTAACTAA...GGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp CATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCCACAGATATCGCCAGGGATTTGTTCTaGTCATGTAGCCAGATGAGG +
Preference number: 2 (lower is better)
Translates to: HGRATAMRSPRGEKSTDIARDLF*SCSQMR
Trigger: CCTCATCTGGCTACATGACCAGAACAAATCCCTGGC...GATATCTGTGGACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGAGAGGAGTTGAGGTCATaGAAGGGCAACAGCAATGAG +
Preference number: 2 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGEELRS*KGNSNE
Trigger: CTCATTGCTGTTGCCCTTCCATGACCTCAACTCCTC...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp GATGAGGGTGGCATTAGGTCAACCTACACATTTGTACTCTCTGCATCTTCCCAGGGTCCTTCTGGGTGTTaGTGGAGGAAACGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: DEGGIRSTYTFVLSASSQGPSGC*WRKRSL
Trigger: GAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACC...CTGGGAAGATGCAGAGAGTACAAATGTGTAGGTTGACCTAATGCCACCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTGGCTGTGACTTAACTGAGGCTGTTGTGTaGAGAACTGATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: DHAGPPEILCLQLVGCDLTEAVV*RTDGGK
Trigger: CTTACCCCCATCAGTTCTCCACACAACAGCCTCAGT...TAAGTCACAGCCAACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 90 bp TGGTCATGTAGCCAGATGAGGGTGGCATTAGGTCAACCTACACATTaGTACTCTCTGCATCTTCCCAGCTTCTGTCTGTGCTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: WSCSQMRVALGQPTH*YSLHLPSFCLCFPG
Trigger: CCCAGGAAAGCACAGACAGAAGCTGGGAAGATGCAGAGAGTACAAATGTGTAGGTTGACCTAATGCCACCCTCATCTGGCTACATGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTCCCCATTCCTTCCTGTaGTGGTGTCCTTTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPPHSFL*WCPFCL
Trigger: GAGACAGAAAGGACACCATCACAGGAAGGAATGGGG...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTATATCCTCTTCTCTCTaGGGCTCTCGCCAACTCCAC +
Preference number: 2 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPISSSL*GSRQLH
Trigger: GTGGAGTTGGCGAGAGCCCCAGAGAGAAGAGGATAT...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GGCTGTCTCTCTGATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTAGGGAGAAGTTGGAGTaGGTAGTTGTGGACTTGTTA +
Preference number: 2 (lower is better)
Translates to: GCLSDHAGPPEILCLQLVREKLE*VVVDLL
Trigger: TAACAAGTCCACAACTACCCACTCCAACTTCTCCCT...AACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATCAGAGAGACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTGGCAAAGCAGGAAGCTaGAGGAACATGGAAGCTGAC +
Preference number: 2 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPGKAGS*RNMEAD
Trigger: GTCAGCTTCCATGTTCCTCCAGCTTCCTGCTTTGCC...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 90 bp GACTTGTATCCCTGGACTCTTTCTGCCCTTTGTGTCTGGGATGAATaGAAAGCAGTACAGTCAGGCACTTCCCCGCCATCTCTCTTGAAT +
Preference number: 2 (lower is better)
Translates to: DLYPWTLSALCVWDE*KAVQSGTSPPSLLN
Trigger: ATTCAAGAGAGATGGCGGGGAAGTGCCTGACTGTACTGCTTTCAATTCATCCCAGACACAAAGGGCAGAAAGAGTCCAGGGATACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 90 bp TTCCCAGCTTCTGTCTGTGCTTTCCTGGGACTCAGTAGACACACTTaGCCCCACAAGCCCACTGTACACTACTTCTTGTTGAAAATGAGC +
Preference number: 2 (lower is better)
Translates to: FPASVCAFLGLSRHT*PHKPTVHYFLLKMS
Trigger: GCTCATTTTCAACAAGAAGTAGTGTACAGTGGGCTTGTGGGGCAAAGTGTGTCTACTGAGTCCCAGGAAAGCACAGACAGAAGCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp TGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGCCTGCTTGGCAGATGTaGATGTTTTCTATAGAAGCA +
Preference number: 2 (lower is better)
Translates to: WQGPGIGRVRTDKEEIPKPAWQM*MFSIEA
Trigger: TGCTTCTATAGAAAACATGCACATCTGCCAAGCAGG...CTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp ACTCGCTTCTCTTCTTTTCTGCTCACATTGAGACCTCGCAGGGAAGCGAGGCTTTATGATAGTATCCTTTaGCCTGCTTGGCAGATGTGC +
Preference number: 2 (lower is better)
Translates to: TRFSSFLLTLRPRREARLYDSIL*PAWQMC
Trigger: GCACATCTGCCAAGCAGGGCAAAGGATACTATCATA...AAGCCTCGCTTCCCTGCGAGGTCTCAATGTGAGCAGAAAAGAAGAGAAGCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp CACACTACCCTGACTCTCAGTTTCCATCTCTGTAAAGACTGGAGAGTGATGCTTCCCAGACATACTTTCTaGCTGAGTGGCCTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: HTTLTLSFHLCKDWRVMLPRHTF*LSGLRY
Trigger: GTACCTCAGGCCACTCAGCCAGAAAGTATGTCTGGG...AAGCATCACTCTCCAGTCTTTACAGAGATGGAAACTGAGAGTCAGGGTAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTGCCAGGGATTTGTTCTaGTCATGTAGCCAGATGAGG +
Preference number: 2 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPARDLF*SCSQMR
Trigger: CCTCATCTGGCTACATGACCAGAACAAATCCCTGGC...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GTGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAACATCTAATGGTTGTGTaGAGGACAGCAAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: VARAWYRKGQNRQGGNPQHLMVV*RTASHK
Trigger: TTTGTGACTTGCTGTCCTCCACACAACCATTAGATG...TTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGCATCTAATGGTTGTGTaGAGGACAGCAAGTCACAAA +
Preference number: 2 (lower is better)
Translates to: WQGPGIGRVRTDKEEIPKHLMVV*RTASHK
Trigger: TTTGTGACTTGCTGTCCTCCACACAACCATTAGATG...CTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp CTCATGATGTCAAGTTGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATATGCTCTCTCTGCTCATaGCTCCTAGGGCCAGCACCA +
Preference number: 2 (lower is better)
Translates to: LMMSSCPEEKGAFEVMEICSLCS*LLGPAP
Trigger: TGGTGCTGGCCCTAGGAGTCATGAGCAGAGAGAGCA...TATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACAACTTGACATCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp AGTAAGGTACCTTTGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGGGTCACAGATGGAAGTaGCAGAGTTGTCTGACACTG +
Preference number: 2 (lower is better)
Translates to: SKVPLKYADGGDPVSHALGHRWK*QSCLTL
Trigger: CAGTGTCAGACAACTCTGTCACTTCCATCTGTGACC...CAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp CTAAGACTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTGCCTCCACAGGCTCTTaGAGCAGCTTAGGAGGTTAT +
Preference number: 2 (lower is better)
Translates to: LRLARGGLAELRNCLGFSASTGS*SSLGGY
Trigger: ATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGC...AGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAGTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TTCCAAGAGGGTAAAGGGAGGCTAAGAAGGTCATGGAACTTACAAGAAACTTTCTTGAATGGCAGTCGGTaGGTGATGGTGGTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: FQEGKGRLRRSWNLQETFLNGSR*VMVVCG
Trigger: CCCACACACCACCATCACCCACCGACTGCCATTCAA...GAAAGTTTCTTGTAAGTTCCATGACCTTCTTAGCCTCCCTTTACCCTCTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CCA 90 bp AGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGTATCAGTGTCTCTTCAGACAGTaGCTCCCCCAGTTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: RGGLAELRNCLGFSSEYQCLFRQ*LPQLLL
Trigger: AAGGAGCAACTGGGGGAGCCACTGTCTGAAGAGACA...CTGATACTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CAA 90 bp GAAGTTGGAGTGGGTAGTTGTGGACTTGTTAACAGTAAGGTACCTTaGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: EVGVGSCGLVNSKVP*KYADGGDPVSHALP
Trigger: AGGCAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACTGTTAACAAGTCCACAACTACCCACTCCAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp ACCTCGCAGGGAAGCGAGGCTTCTCAGTGCTTTATGATAGTATCCTTTGCCCTGGAACCCAAGGAATTCTaGCTAAGGATTTTAACCTGT +
Preference number: 2 (lower is better)
Translates to: TSQGSEASQCFMIVSFALEPKEF*LRILTC
Trigger: ACAGGTTAAAATCCTTAGGCAGAATTCCTTGGGTTC...CAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTTCCCTGCGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp GATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTGGCTGTGACTTAAGCGAGGCTTCTCAGTaGTTTATGATAGTATCCTTT +
Preference number: 2 (lower is better)
Translates to: DHAGPPEILCLQLVGCDLSEASQ*FMIVSF
Trigger: AAAGGATACTATCATAAAGCACTGAGAAGCCTCGCT...TAAGTCACAGCCAACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGTGTGGAGGACAGCAAGTCACAAAGAGGGCTGGAAAACCACATAAAAGGTGGAATCCTTTGCCCTGCTTaGCAGATGTGCATGTTTTCT +
Preference number: 2 (lower is better)
Translates to: CVEDSKSQRGLENHIKGGILCPA*QMCMFS
Trigger: AGAAAACATGCACATCTGCCAAGCAGGGCAAAGGAT...TCCACCTTTTATGTGGTTTTCCAGCCCTCTTTGTGACTTGCTGTCCTCCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp AGTAAGGTACCTTTGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGCTGTCTGTGCTTTCCTaGGACTCAGTAGACACACTT +
Preference number: 2 (lower is better)
Translates to: SKVPLKYADGGDPVSHALLSVLS*DSVDTL
Trigger: AAGTGTGTCTACTGAGTCCCAGGAAAGCACAGACAG...CAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTAGGGAGAAGTTGGAGTaGGTAGTTGTGGACTTGTTA +
Preference number: 2 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPREKLE*VVVDLL
Trigger: TAACAAGTCCACAACTACCCACTCCAACTTCTCCCT...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTAGCAGCAGGGTCATGTaGGACAGGGAAGATGAGGAT +
Preference number: 2 (lower is better)
Translates to: LIKILSGHLWELSGQITPSSRVM*DREDED
Trigger: ATCCTCATCTTCCCTGTCTCACATGACCCTGCTGCT...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR GCA 90 bp GATGAGGGTGGCATTAGGTCAACCTACACATTTGTACTCTCTGCATCTTCCCAGCCTGCTTGGCAGATGTaGATGTTTTCTATAGAAGCA +
Preference number: 2 (lower is better)
Translates to: DEGGIRSTYTFVLSASSQPAWQM*MFSIEA
Trigger: TGCTTCTATAGAAAACATGCACATCTGCCAAGCAGG...CTGGGAAGATGCAGAGAGTACAAATGTGTAGGTTGACCTAATGCCACCCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GAATTCTGCCTAAGGATTTTAACCTGTCTGAAATCTGCTCCCAGGGAAGATGTTTTGTCCTCAGTGGTTTaGTGGGGCTTGGTATACAGG +
Preference number: 2 (lower is better)
Translates to: EFCLRILTCLKSAPREDVLSSVV*WGLVYR
Trigger: CCTGTATACCAAGCCCCACCAAACCACTGAGGACAA...AACATCTTCCCTGGGAGCAGATTTCAGACAGGTTAAAATCCTTAGGCAGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTCTACATAAAGTCCCATaGTGTGTGGCAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LIKILSGHLWELSGQITPLHKVP*CVARAW
Trigger: CCAGGCCCTTGCCACACACCATGGGACTTTATGTAG...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GGCTGTCTCTCTGATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTCTTAAAATATTGCTGTaGACCATTCTTTGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: GCLSDHAGPPEILCLQLVLKILL*TILCLF
Trigger: AAACAGGCAAAGAATGGTCCACAGCAATATTTTAAG...AACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATCAGAGAGACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CCA 90 bp GATGAGGGTGGCATTAGGTCAACCTACACATTTGTACTCTCTGCATCTTCCCAGAGCTTAGGAGGTTATTaGAGCATATGGTGCAAGACA +
Preference number: 2 (lower is better)
Translates to: DEGGIRSTYTFVLSASSQSLGGY*SIWCKT
Trigger: TGTCTTGCACCATATGCTCCAATAACCTCCTAAGCT...CTGGGAAGATGCAGAGAGTACAAATGTGTAGGTTGACCTAATGCCACCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp TGGCTCCTAGCACTCTGCTGTAAACAGCTTCAGTGTTACATAAATACCAGTGTCCAGCTCTTTTACAGGTaGGAAAATTGGGTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: WLLALCCKQLQCYINTSVQLFYR*ENWVSE
Trigger: CTCAGAGACCCAATTTTCTCACCTGTAAAAGAGCTG...GACACTGGTATTTATGTAACACTGAAGCTGTTTACAGCAGAGTGCTAGGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR GCA 90 bp GGTTGTGTGGAGGACAGCAAGTCACAAAGAGGGCTGGAAAACCACATAAAAGGTAGCGAGGCTTCTCAGTaGTTTATGATAGTATCCTTT +
Preference number: 2 (lower is better)
Translates to: GCVEDSKSQRGLENHIKGSEASQ*FMIVSF
Trigger: AAAGGATACTATCATAAAGCACTGAGAAGCCTCGCT...ACCTTTTATGTGGTTTTCCAGCCCTCTTTGTGACTTGCTGTCCTCCACACAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 90 bp CATGCTTTGCCTACAGTTGTGAATCAGCAAATAATTTCCTTATGTTaGGTGACTAAGGTCATGGATGCAGATGAGGTCTCAAAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: HALPTVVNQQIISLC*VTKVMDADEVSKGD
Trigger: GTCTCCCTTTGAGACCTCATCTGCATCCATGACCTTAGTCACCAAACATAAGGAAATTATTTGCTGATTCACAACTGTAGGCAAAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR TCA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTGAATGGTATTTTCGATaGGATCTCATGATGTCAAGT +
Preference number: 2 (lower is better)
Translates to: LIKILSGHLWELSGQITPEWYFR*DLMMSS
Trigger: ACTTGACATCATGAGATCTCATCGAAAATACCATTC...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp GACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTaGTCCAGTGTCCCTCAAGCTTTTCAGGGATGCAGC +
Preference number: 3 (lower is better)
Translates to: DPWVVQPLGDWQ*SSVPQAFQGCS
Trigger: GCTGCATCCCTGAAAAGCTTGAGGGACACTGGAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp GGCACTTCCCCGCCATCTCTCTTGAATGGCAGTCGGTaGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: GTSPPSLLNGSR*VMVVCGQSVLQ
Trigger: TTGGAGGACTGACTGCCCACACACCACCATCACCCACCGACTGCCATTCAAGAGAGATGGCGGGGAAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTaGGGACTGGCAGTGCTCCAGTGTCCCTCAAGCTTT +
Preference number: 3 (lower is better)
Translates to: FWRRGPLGGAAT*GLAVLQCPSSF
Trigger: AAAGCTTGAGGGACACTGGAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CAA 90 bp GAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCGGGTCCTTCTGGGTGTaGCTGGAGGAAACGAAGCCT +
Preference number: 3 (lower is better)
Translates to: ESSGREVHRYPLLSGALAGSFWV*LEETKP
Trigger: AGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCC...GGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR GCA 72 bp TCCCCCAGTTGCTCCTTTGAGGGTCCTTCTGGGTGTTaGTGGAGGAAACGAAGCCTCCACAGGCTCTTGCAG +
Preference number: 3 (lower is better)
Translates to: SPSCSFEGPSGC*WRKRSLHRLLQ
Trigger: CTGCAAGAGCCTGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 72 bp AGTACAGTCAGGCACTTCCCCGCCATCTCTCTTGAATaGCAGTCGGTGGGTGATGGTGGTGTGTGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: STVRHFPAISLE*QSVGDGGVWAV
Trigger: GACTGCCCACACACCACCATCACCCACCGACTGCCATTCAAGAGAGATGGCGGGGAAGTGCCTGACTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp CCCAGTTGCTCCTTTGAGGGTCCTTCTGGGTGTTGCTaGAGGAAACGAAGCCTCCACAGGCTCTTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: PSCSFEGPSGCC*RKRSLHRLLQQ
Trigger: CTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR TCA 72 bp TCAGGGATGCAGCTGTTGGAATCGCACACGCTCCTGTaGCCCCAGGAAACCCATCAACATGCTTGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: SGMQLLESHTLL*PQETHQHACLA
Trigger: GGCCAGACAAGCATGTTGATGGGTTTCCTGGGGTCACAGGAGCGTGTGCGATTCCAACAGCTGCATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR TCA 72 bp GGGCACTGTGGTCTTGAGTCTGACTGGCTGTCTCTCTaGTCACGCAGGTCCACCAGAGATCTTGTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: GHCGLESDWLSL*SRRSTRDLVPP
Trigger: TGGAGGCACAAGATCTCTGGTGGACCTGCGTGATCAGAGAGACAGCCAGTCAGACTCAAGACCACAGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp CCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTaGAGAGTCACCTTGTGCATAAGCGATGTCCTGACC +
Preference number: 3 (lower is better)
Translates to: PRLPVCKAGVLA*RVTLCISDVLT
Trigger: GGTCAGGACATCGCTTATGCACAAGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR GCA 72 bp TACCGTGCACAGTCTTATGTGGGCTGTGAGGTAGTGTaGCCTGTGCCCTGTGGCTTTAGCATGGGGCACACA +
Preference number: 3 (lower is better)
Translates to: YRAQSYVGCEVV*PVPCGFSMGHT
Trigger: TGTGTGCCCCATGCTAAAGCCACAGGGCACAGGGCACACTACCTCACAGCCCACATAAGACTGTGCACGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp GTGAGCCTCCAGGCTCAGGCTGAAGTTTGTCCTCAGTaGTTTGGTGGGGCTTGGTATACAGGGGCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: VSLQAQAEVCPQ*FGGAWYTGAPE
Trigger: TTCTGGAGCCCCTGTATACCAAGCCCCACCAAACCACTGAGGACAAACTTCAGCCTGAGCCTGGAGGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp GTGCAAGACAATGCTGTTTTCCCCAGAGGCTGGAGGTaGGGCGAGTCCTGCAGTGACTACCTTCAGCATCCA +
Preference number: 3 (lower is better)
Translates to: VQDNAVFPRGWR*GESCSDYLQHP
Trigger: TGGATGCTGAAGGTAGTCACTGCAGGACTCGCCCCACCTCCAGCCTCTGGGGAAAACAGCATTGTCTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GCAAAGCAGGAAGCTGGAGGAACATGGAAGCTGACAAGGCCAGGTTGGCGGGCTGCCAACTCCACCTCCTaGAATCTCTCAGTCATTCTC +
Preference number: 3 (lower is better)
Translates to: AKQEAGGTWKLTRPGWRAANSTS*NLSVIL
Trigger: GAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGGC...AGCCCGCCAACCTGGCCTTGTCAGCTTCCATGTTCCTCCAGCTTCCTGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp TGGAAACACAGAATGGACTTGAAGTTCCACCTCGGCTaGTGCTCCCCCAGGCTTCATGCACCCCGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: WKHRMDLKFHLG*CSPRLHAPRLC
Trigger: GCACAAACGGGGTGCATGAAGCCTGGGGGAGCATCAGCCGAGGTGGAACTTCAAGTCCATTCTGTGTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp GACCCCAGGAAACCCATCAACATGCTTGTCTGGCCCTaGGTGGATGGACTTGTATCCCTGGACTCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: DPRKPINMLVWP*VDGLVSLDSFC
Trigger: GCAGAAAGAGTCCAGGGATACAAGTCCATCCACCCAGGGCCAGACAAGCATGTTGATGGGTTTCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp CTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTaGGGCTCTCGCCAACTCCACCTCCTTGAATCTCTC +
Preference number: 3 (lower is better)
Translates to: LGERSPQISSSL*GSRQLHLLESL
Trigger: GAGAGATTCAAGGAGGTGGAGTTGGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp TACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTCACTGCCAGAGATTCTaGACACGGCACAGTTGGGGT +
Preference number: 3 (lower is better)
Translates to: YLYRTGRGCLSVRLGFLLHCQRF*TRHSWG
Trigger: ACCCCAACTGTGCCGTGTCAAGAATCTCTGGCAGTG...AAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CAA 90 bp GGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAAGGAGGTATCCTTTGCCCTGCTaGGCAGATGTGCATGTTTTC +
Preference number: 3 (lower is better)
Translates to: GGGRRGSWKPKETWVSRRYPLPC*ADVHVF
Trigger: GAAAACATGCACATCTGCCAAGCAGGGCAAAGGATA...CCTCCTTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp CCAGGAAACCCATCAACATGCTTGTCTGGCCCTGGGTaGATGGACTTGTATCCCTGGACTCTTTCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: PGNPSTCLSGPG*MDLYPWTLSAL
Trigger: AAGGGCAGAAAGAGTCCAGGGATACAAGTCCATCCACCCAGGGCCAGACAAGCATGTTGATGGGTTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp CAAGGAAACCTGGGTATCAAGGAGGAGTTGAGGTCATaGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGA +
Preference number: 3 (lower is better)
Translates to: QGNLGIKEELRS*KGNSNEESSGR
Trigger: TCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATGACCTCAACTCCTCCTTGATACCCAGGTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp GAAGCTGGAGGAACATGGAAGCTGACAAGGCCAGGTTaGCGGGCTGGTCTAAAGAAGGTTCTATCCTGGATG +
Preference number: 3 (lower is better)
Translates to: EAGGTWKLTRPG*RAGLKKVLSWM
Trigger: CATCCAGGATAGAACCTTCTTTAGACCAGCCCGCCAACCTGGCCTTGTCAGCTTCCATGTTCCTCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp GGAGATCCAAGTGATAAGGCCAGCATCTTGGTGTCCTaGGCAGGATCTAGACAGCCTCATAGGACAACAGCC +
Preference number: 3 (lower is better)
Translates to: GDPSDKASILVS*AGSRQPHRTTA
Trigger: GGCTGTTGTCCTATGAGGCTGTCTAGATCCTGCCCAGGACACCAAGATGCTGGCCTTATCACTTGGATCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR TCA 72 bp CCTGGACTCTTTCTGCCCTTTGTGTCTGGGATGAATTaGAAGCAGTACAGTCAGGCACTTCCCCGCCATCTC +
Preference number: 3 (lower is better)
Translates to: PGLFLPFVSGMN*KQYSQALPRHL
Trigger: GAGATGGCGGGGAAGTGCCTGACTGTACTGCTTTCAATTCATCCCAGACACAAAGGGCAGAAAGAGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR TCA 72 bp GTATCCCTGGACTCTTTCTGCCCTTTGTGTCTGGGATaGATTGAAAGCAGTACAGTCAGGCACTTCCCCGCC +
Preference number: 3 (lower is better)
Translates to: VSLDSFCPLCLG*IESSTVRHFPA
Trigger: GGCGGGGAAGTGCCTGACTGTACTGCTTTCAATTCATCCCAGACACAAAGGGCAGAAAGAGTCCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CAA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTAAACCACGTTCCCCATaGCCACTGCCAGAGATTCTT +
Preference number: 3 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGKPRSP*PLPEIL
Trigger: AAGAATCTCTGGCAGTGGCAATGGGGAACGTGGTTT...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CAA 90 bp CCTCAGTGGTTTGGTGGGGCTTGGTATACAGGGGCTCCAGAAAGGAGATCCAAGTATCCTTTGCCCTGCTaGGCAGATGTGCATGTTTTC +
Preference number: 3 (lower is better)
Translates to: PQWFGGAWYTGAPERRSKYPLPC*ADVHVF
Trigger: GAAAACATGCACATCTGCCAAGCAGGGCAAAGGATA...CTTGGATCTCCTTTCTGGAGCCCCTGTATACCAAGCCCCACCAAACCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GCAAAGCAGGAAGCTGGAGGAACATGGAAGCTGACAAGGCCAGGTTGGCGGGCTTGGGTAGTTGTGGACTaGTTAACAGTAAGGTACCTT +
Preference number: 3 (lower is better)
Translates to: AKQEAGGTWKLTRPGWRAWVVVD*LTVRYL
Trigger: AAGGTACCTTACTGTTAACAAGTCCACAACTACCCA...AGCCCGCCAACCTGGCCTTGTCAGCTTCCATGTTCCTCCAGCTTCCTGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GTGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGATATATCCTCTGCTaGAGAAGGAGGGCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: VARAWYRKGQNRQGGNPQGYILC*RRRALE
Trigger: CTCCAAAGCCCTCCTTCTCAAGCAGAGGATATATCC...TTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp TGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGAAGCAGCTTTTCCAGTaGTCCCGATGGAGACTACAG +
Preference number: 3 (lower is better)
Translates to: WQGPGIGRVRTDKEEIPKKQLFQ*SRWRLQ
Trigger: CTGTAGTCTCCATCGGGACAACTGGAAAAGCTGCTT...CTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GCAAAGCAGGAAGCTGGAGGAACATGGAAGCTGACAAGGCCAGGTTGGCGGGCTACTGTACACTACTTCTaGTTGAAAATGAGCACCATC +
Preference number: 3 (lower is better)
Translates to: AKQEAGGTWKLTRPGWRATVHYF*LKMSTI
Trigger: GATGGTGCTCATTTTCAACAAGAAGTAGTGTACAGT...AGCCCGCCAACCTGGCCTTGTCAGCTTCCATGTTCCTCCAGCTTCCTGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp AGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTGGCAGGTTGTCCAGGCGAGGGAGAAGTaGGAGTGGGTAGTTGTGGAC +
Preference number: 3 (lower is better)
Translates to: RLQKKVYMCRNLLMWQVVQAREK*EWVVVD
Trigger: GTCCACAACTACCCACTCCAACTTCTCCCTCGCCTG...GACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp AGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTGGCAGGTTGTCCTTCATGCACCCCGTTaGTGCTGCCAGGAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: RLQKKVYMCRNLLMWQVVLHAPR*CCQERL
Trigger: GAGCCTTTCCTGGCAGCACAAACGGGGTGCATGAAG...GACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp ATGTTTTGTGTGTTCTGTGAGCCTCCAGGCTCAGGCTaGAGTTTGTCCTCAGTGGTTTGGTGGGGCTTGGTA +
Preference number: 3 (lower is better)
Translates to: MFCVFCEPPGSG*SLSSVVWWGLV
Trigger: TACCAAGCCCCACCAAACCACTGAGGACAAACTTCAGCCTGAGCCTGGAGGCTCACAGAACACACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp ACCAAGGGTTTTGAAACCCAGGATATATCCTCTGCTTaGGAAGGAGGGCTTTGGAGAAGCAGGCGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: TKGFETQDISSA*EGGLWRSRRGR
Trigger: TCTCCCTCGCCTGCTTCTCCAAAGCCCTCCTTCTCAAGCAGAGGATATATCCTGGGTTTCAAAACCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp AAGGTAGAAAGAGGGGCCGAGGCTGACCAAGGGTTTTaGAACCCAGGATATATCCTCTGCTTGAGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: KVERGAEADQGF*NPGYILCLRRR
Trigger: CCTCCTTCTCAAGCAGAGGATATATCCTGGGTTTCAAAACCCTTGGTCAGCCTCGGCCCCTCTTTCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp TCCACCAGAGATCTTGTGCCTCCAGTTAGTTGGCTGTaGCTTAAGAGACTCACCTGCCATTGGCTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: STRDLVPPVSWL*LKRLTCHWLPR
Trigger: TCTTGGGAGCCAATGGCAGGTGAGTCTCTTAAGTCACAGCCAACTAACTGGAGGCACAAGATCTCTGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp CACATTGAGACCTCGCAGGGAAGCGAGGCTTCTCAGTaGTTTATGATAGTATCCTTTGCCCTGCTTGGCAGA +
Preference number: 3 (lower is better)
Translates to: HIETSQGSEASQ*FMIVSFALLGR
Trigger: TCTGCCAAGCAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTTCCCTGCGAGGTCTCAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp TGCTGCCAGGAAAGGCTCCAGAAGAAAGTTTACATGTaGAGGAATCTTCTGATGTGGCAGGTTGTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: CCQERLQKKVYM*RNLLMWQVVPG
Trigger: CCCAGGGACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCTTTCCTGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp AGAGCCAATGGCTTCTACATAAAGTCCCATGGTGTGTaGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGAC +
Preference number: 3 (lower is better)
Translates to: RANGFYIKSHGV*QGPGIGRVRTD
Trigger: GTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCACACACCATGGGACTTTATGTAGAAGCCATTGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp GGCTCTTGCAGCAGCTTAGGAGGTTATTGGAGCATATaGTGCAAGACAATGCTGTTTTCCCCAGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: GSCSSLGGYWSI*CKTMLFSPEAG
Trigger: TCCAGCCTCTGGGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 72 bp GCCTCCACAGGCTCTTGCAGCAGCTTAGGAGGTTATTaGAGCATATGGTGCAAGACAATGCTGTTTTCCCCA +
Preference number: 3 (lower is better)
Translates to: ASTGSCSSLGGY*SIWCKTMLFSP
Trigger: TGGGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 72 bp TCCAGAAAGGAGATCCAAGTGATAAGGCCAGCATCTTaGTGTCCTGGGCAGGATCTAGACAGCCTCATAGGA +
Preference number: 3 (lower is better)
Translates to: SRKEIQVIRPAS*CPGQDLDSLIG
Trigger: TCCTATGAGGCTGTCTAGATCCTGCCCAGGACACCAAGATGCTGGCCTTATCACTTGGATCTCCTTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp TCGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCAACAAGAACAAATTCATaGTATCTGCCTCTACACACT +
Preference number: 3 (lower is better)
Translates to: SVGDGGVWAVSPPTLYRATRTNS*YLPLHT
Trigger: AGTGTGTAGAGGCAGATACAATGAATTTGTTCTTGT...TGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CAA 90 bp GGCGTGGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAAGTACACTACTTCTTGTaGAAAATGAGCACCATCAAT +
Preference number: 3 (lower is better)
Translates to: GVEAAGEGLGNPRKPGYQVHYFL*KMSTIN
Trigger: ATTGATGGTGCTCATTTTCAACAAGAAGTAGTGTAC...TTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCGTACACTACTTCTTGTaGAAAATGAGCACCATCAAT +
Preference number: 3 (lower is better)
Translates to: GVLGERSPQISSSLWGSRVHYFL*KMSTIN
Trigger: ATTGATGGTGCTCATTTTCAACAAGAAGTAGTGTAC...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp TCTTGCAGCAGCTTAGGAGGTTATTGGAGCATATGGTaGAAGACAATGCTGTTTTCCCCAGAGGCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SCSSLGGYWSIW*KTMLFSPEAGG
Trigger: ACCTCCAGCCTCTGGGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CCA 72 bp CTGAACTCCAAGGGACAGTCACATCTAATGGTTGTGTaGAGGACAGCAAGTCACAAAGAGGGCTGGAAAACC +
Preference number: 3 (lower is better)
Translates to: LNSKGQSHLMVV*RTASHKEGWKT
Trigger: GGTTTTCCAGCCCTCTTTGTGACTTGCTGTCCTCCACACAACCATTAGATGTGACTGTCCCTTGGAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GATGAGGGTGGCATTAGGTCAACCTACACATTTGTACTCTCTGCATCTTCCCAGTTTGTCCTCAGTGGTTaGGTGGGGCTTGGTATACAG +
Preference number: 3 (lower is better)
Translates to: DEGGIRSTYTFVLSASSQFVLSG*VGLGIQ
Trigger: CTGTATACCAAGCCCCACCAAACCACTGAGGACAAA...CTGGGAAGATGCAGAGAGTACAAATGTGTAGGTTGACCTAATGCCACCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp GGCTGTCTCTCTGATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTAGGCCAAATTACTCCTaGAAGTTTATTGGCAGGCTA +
Preference number: 3 (lower is better)
Translates to: GCLSDHAGPPEILCLQLVRPNYS*KFIGRL
Trigger: TAGCCTGCCAATAAACTTCAAGGAGTAATTTGGCCT...AACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATCAGAGAGACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp CTAAGACTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTAGCCTCCACAGGCTCTaGCAGCAGCTTAGGAGGTTA +
Preference number: 3 (lower is better)
Translates to: LRLARGGLAELRNCLGFSSLHRL*QQLRRL
Trigger: TAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCT...AGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR TCA 72 bp CTCTTCTCTCTGGGGCTCTCGCCAACTCCACCTCCTTaGATCTCTCAGTCATTCTCTAACTATAGAAAGGGA +
Preference number: 3 (lower is better)
Translates to: LFSLGLSPTPPP*ISQSFSNYRKG
Trigger: TCCCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGGCGAGAGCCCCAGAGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp GACTTGTATCCCTGGACTCTTTCTGCCCTTTGTGTCTaGGATGAATTGAAAGCAGTACAGTCAGGCACTTCC +
Preference number: 3 (lower is better)
Translates to: DLYPWTLSALCV*DELKAVQSGTS
Trigger: GGAAGTGCCTGACTGTACTGCTTTCAATTCATCCCAGACACAAAGGGCAGAAAGAGTCCAGGGATACAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CCA 72 bp CTTCTACATAAAGTCCCATGGTGTGTGGCAAGGGCCTaGTATAGGAAGGGTCAGAACAGACAAGGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: LLHKVPWCVARA*YRKGQNRQGGN
Trigger: ATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCACACACCATGGGACTTTATGTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp CAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTaGCAGGTTGTCCCTGGGCACTGTGGTCTTGAGTCT +
Preference number: 3 (lower is better)
Translates to: QKKVYMCRNLLM*QVVPGHCGLES
Trigger: AGACTCAAGACCACAGTGCCCAGGGACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp AGTATCCTTTGCCCTGCTTGGCAGATGTGCATGTTTTCTATAGAAGCACGTCCATTTGTCCTCAGTGGTTaGGTGGGGCTTGGTATACAG +
Preference number: 3 (lower is better)
Translates to: SILCPAWQMCMFSIEARPFVLSG*VGLGIQ
Trigger: CTGTATACCAAGCCCCACCAAACCACTGAGGACAAA...TGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTCGGCAGGAGAGGGTCTaGGAAACCCAAGGAAACCTG +
Preference number: 3 (lower is better)
Translates to: LIKILSGHLWELSGQITPRQERV*ETQGNL
Trigger: CAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCG...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR-3UTR CAA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTTTGAGAAGGAGGGCTTaGGAGAAGCAGGCGAGGGAG +
Preference number: 3 (lower is better)
Translates to: LIKILSGHLWELSGQITPLRRRA*EKQARE
Trigger: CTCCCTCGCCTGCTTCTCCAAAGCCCTCCTTCTCAA...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp TGTATCTGCCTCTACACACTAAGCAACTCATCAGGATaGAAACCACGTTCCCCATTGCCACTGCCAGAGATT +
Preference number: 3 (lower is better)
Translates to: CICLYTLSNSSG*KPRSPLPLPEI
Trigger: AATCTCTGGCAGTGGCAATGGGGAACGTGGTTTTCATCCTGATGAGTTGCTTAGTGTGTAGAGGCAGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR GCA 72 bp GCCAGCACCAACATGAGCTTTGAACCCAAGGAATTCTaGCTAAGGATTTTAACCTGTCTGAAATCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: ASTNMSFEPKEF*LRILTCLKSAP
Trigger: GGGAGCAGATTTCAGACAGGTTAAAATCCTTAGGCAGAATTCCTTGGGTTCAAAGCTCATGTTGGTGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp ACTCACCTGCCATTGGCTCCCAAGAAGATGTCTAAGTaGGTCTCTTGGGCTTTCAGAGGGAATTTGATAAAG +
Preference number: 3 (lower is better)
Translates to: THLPLAPKKMSK*VSWAFRGNLIK
Trigger: CTTTATCAAATTCCCTCTGAAAGCCCAAGAGACCCACTTAGACATCTTCTTGGGAGCCAATGGCAGGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp CTATTTCTGCAGGAGCAGGACCAGCTCTTTTACAGGTaGGAAAATTGGGTCTCTGAGAAAGATGTGACCTTC +
Preference number: 3 (lower is better)
Translates to: LFLQEQDQLFYR*ENWVSEKDVTF
Trigger: GAAGGTCACATCTTTCTCAGAGACCCAATTTTCTCACCTGTAAAAGAGCTGGTCCTGCTCCTGCAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR TCA 72 bp TGGGTAGTTGTGGACTTGTTAACAGTAAGGTACCTTTaGAGTATGCAGATGGAGGTGACCCAGTGTCTCATG +
Preference number: 3 (lower is better)
Translates to: WVVVDLLTVRYL*SMQMEVTQCLM
Trigger: CATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACTGTTAACAAGTCCACAACTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp CTCTGTCATGCTATCCCATCCTGGCTCCTAGCACTCTaGTGTAAACAGCTTCAGTGTTACATAAATACCAGT +
Preference number: 3 (lower is better)
Translates to: LCHAIPSWLLAL*CKQLQCYINTS
Trigger: ACTGGTATTTATGTAACACTGAAGCTGTTTACAGCAGAGTGCTAGGAGCCAGGATGGGATAGCATGACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR-3UTR CAA 90 bp GAAGGGCTAAGACTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCACTGTACACTACTTCTaGTTGAAAATGAGCACCATC +
Preference number: 3 (lower is better)
Translates to: EGLRLARGGLAELRNCLGTVHYF*LKMSTI
Trigger: GATGGTGCTCATTTTCAACAAGAAGTAGTGTACAGT...GCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAGTCTTAGCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp GGAATTCTGCCTAAGGATTTTAACCTGTCTGAAATCTaGTCCCAGGGAAGATGTTTTGTGTGTTCTGTGAGC +
Preference number: 3 (lower is better)
Translates to: GILPKDFNLSEI*SQGRCFVCSVS
Trigger: GCTCACAGAACACACAAAACATCTTCCCTGGGAGCAGATTTCAGACAGGTTAAAATCCTTAGGCAGAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp CCATTGGCTCCCAAGAAGATGTCTAAGTGGGTCTCTTaGGCTTTCAGAGGGAATTTGATAAAGATACTCAGT +
Preference number: 3 (lower is better)
Translates to: PLAPKKMSKWVS*AFRGNLIKILS
Trigger: ACTGAGTATCTTTATCAAATTCCCTCTGAAAGCCCAAGAGACCCACTTAGACATCTTCTTGGGAGCCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp CTTTATGATAGTATCCTTTGCCCTGCTTGGCAGATGTaGATGTTTTCTATAGAAGCACGTCCATGTACACCT +
Preference number: 3 (lower is better)
Translates to: LYDSILCPAWQM*MFSIEARPCTP
Trigger: AGGTGTACATGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACTATCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR GCA 72 bp AAGCGAGGCTTCTCAGTGCTTTATGATAGTATCCTTTaGCCTGCTTGGCAGATGTGCATGTTTTCTATAGAA +
Preference number: 3 (lower is better)
Translates to: KRGFSVLYDSIL*PAWQMCMFSIE
Trigger: TTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp TTCTCAGTGCTTTATGATAGTATCCTTTGCCCTGCTTaGCAGATGTGCATGTTTTCTATAGAAGCACGTCCA +
Preference number: 3 (lower is better)
Translates to: FSVLYDSILCPA*QMCMFSIEARP
Trigger: TGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACTATCATAAAGCACTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp TTGGGCTTTCAGAGGGAATTTGATAAAGATACTCAGTaGTCATCTCTGGGAGTTATCAGGCCAAATTACTCC +
Preference number: 3 (lower is better)
Translates to: LGFQREFDKDTQ*SSLGVIRPNYS
Trigger: GGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAAATTCCCTCTGAAAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR TCA 72 bp ACAAGGAGGAAATCCCCAAGGGAATGGTATTTTCGATaGGATCTCATGATGTCAAGTTGTCCAGAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: TRRKSPREWYFR*DLMMSSCPEEK
Trigger: TTTCTCTTCTGGACAACTTGACATCATGAGATCTCATCGAAAATACCATTCCCTTGGGGATTTCCTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CCA 72 bp TATATAAATTATGAGAGCCTGTGTAGGCAAAGTATCTaGAACTTAGTTAGGTGTCCATGGAGGGCAATTTCT +
Preference number: 3 (lower is better)
Translates to: YINYESLCRQSI*NLVRCPWRAIS
Trigger: AGAAATTGCCCTCCATGGACACCTAACTAAGTTCCAGATACTTTGCCTACACAGGCTCTCATAATTTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTTGACCGCAGTGGGTCCGTaGCAGCGCAGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: RPRLPVCKAGVLACRVTLTAVGP*QRSSGP
Trigger: TGGACCGCTACTGCGCTGTCACGGACCCACTGCGGT...CAAGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp GAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCACCGCAGTGGGTCCGTaGCAGCGCAGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: ESSGREVHRYPLLSGALATAVGP*QRSSGP
Trigger: TGGACCGCTACTGCGCTGTCACGGACCCACTGCGGT...GGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTTGGACTCAGTCGTGTCCTaGCTGGGCTTCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RPRLPVCKAGVLACRVTLDSVVS*LGFPGG
Trigger: ACCCCCAGGGAAGCCCAGTCAGGACACGACTGAGTC...CAAGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 72 bp GTTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTaGGGGACTGGCAGTGCTCCAGTGTCCCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLEKGTLGWCSH*GTGSAPVSLKL
Trigger: AAGCTTGAGGGACACTGGAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp TCGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCATTCCCTGGGGGTGTGTaGGTTCTGTCCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: SVGDGGVWAVSPPTLYRAFPGGV*VLSHST
Trigger: TGTGGAGTGGGACAGAACTCACACACCCCCAGGGAA...TGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp CACGTTCCCCATTGCCACTGCCAGAGATTCTTGACACGGCACAGTTGGGGTTGTCACGGGGTACCGCAGTaGGTCCGTGACAGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: HVPHCHCQRFLTRHSWGCHGVPQ*VRDSAV
Trigger: TACTGCGCTGTCACGGACCCACTGCGGTACCCCGTG...ACAACCCCAACTGTGCCGTGTCAAGAATCTCTGGCAGTGGCAATGGGGAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp GTCGCCGGCAGCAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGGGGTGGCGTACAGGATaGGGTTCAGGGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: VAGSRYLYRTGRGCLSVRGWRTG*GSGLNW
Trigger: CCAATTCAGCCCTGAACCCCATCCTGTACGCCACCC...CCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTGCTGCCGGCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp GAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCGGGTGGCGTACAGGATaGGGTTCAGGGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: ESSGREVHRYPLLSGALAGWRTG*GSGLNW
Trigger: CCAATTCAGCCCTGAACCCCATCCTGTACGCCACCC...GGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTGCTCCTCGGCTTTGGCTCCTaGACAGCAGAGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FWRRGPLGGAATWGLAVLLGFGS*TAESCS
Trigger: TGAACAACTCTCTGCTGTCCAGGAGCCAAAGCCGAG...GAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp CACGTTCCCCATTGCCACTGCCAGAGATTCTTGACACGGCACAGTTGGGGTTGTGTCCCACTCCACACCTaGAGCTTCAGGGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HVPHCHCQRFLTRHSWGCVPLHT*SFRGFS
Trigger: GGAGAAGCCCCTGAAGCTTCAGGTGTGGAGTGGGAC...ACAACCCCAACTGTGCCGTGTCAAGAATCTCTGGCAGTGGCAATGGGGAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp GGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAAGGAGGAGTGGCTCCCCCAGTTaGTCCTTTGAGGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGGRRGSWKPKETWVSRRSGSPS*SFEGPS
Trigger: AGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACT...CCTCCTTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR CCA 90 bp GTGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAACACGGGGTACCGCAGTaGGTCCGTGACAGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: VARAWYRKGQNRQGGNPQHGVPQ*VRDSAV
Trigger: TACTGCGCTGTCACGGACCCACTGCGGTACCCCGTG...TTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTTGGATGGGGTTCAGGGCTaGATTGGCATAACCCAACCA +
Preference number: 4 (lower is better)
Translates to: RPRLPVCKAGVLACRVTLDGVQG*IGITQP
Trigger: TGGTTGGGTTATGCCAATTCAGCCCTGAACCCCATC...CAAGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp GAGTTGAGGTCATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCTGCGGAAGTCTCTGTTaGGGGTGGCGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: ELRSWKGNSNEESSGREVCGSLC*GWRTGW
Trigger: CCATCCTGTACGCCACCCTCAACAGAGACTTCCGCA...GACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATGACCTCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp GTTGCTCCTTTGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGCCTCCACATGCGGAAGTCTCTGTTaGGGGTGGCGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: VAPLRVLLGVAGGNEASTCGSLC*GWRTGW
Trigger: CCATCCTGTACGCCACCCTCAACAGAGACTTCCGCA...TGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp CATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCCACAGATATCGTCCCACTCCACACCTaGAGCTTCAGGGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HGRATAMRSPRGEKSTDIVPLHT*SFRGFS
Trigger: GGAGAAGCCCCTGAAGCTTCAGGTGTGGAGTGGGAC...GATATCTGTGGACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp CACGTTCCCCATTGCCACTGCCAGAGATTCTTGACACGGCACAGTTGGGGTTGTTTCCCAGCTTCCAGATaGAGGACAGGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HVPHCHCQRFLTRHSWGCFPASR*RTGGSG
Trigger: GCCTGAGCCTCCTGTCCTTCATCTGGAAGCTGGGAA...ACAACCCCAACTGTGCCGTGTCAAGAATCTCTGGCAGTGGCAATGGGGAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp TCGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCAGGCTGGTGTAGATGTTaGAGAAGACCTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVGDGGVWAVSPPTLYRAGWCRC*RRPGQS
Trigger: GCTTTGGCCAGGTCTTCTGCAACATCTACACCAGCC...TGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp CGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCACTTCCAGGAGCTGATGTaGTTGATCCTCTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RWVMVVCGQSVLQHCTVHFQELM*LILLAC
Trigger: GCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAA...GTGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp TCGGTGGGTGATGGTGGTGTGTGGGCAGTCAGTCCTCCAACACTGTACCGTGCACAGTGGAAGAGCTGTTaGTACGCCATGCGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SVGDGGVWAVSPPTLYRAQWKSC*YAMRKS
Trigger: AGACTTCCGCATGGCGTACCAACAGCTCTTCCACTG...TGCACGGTACAGTGTTGGAGGACTGACTGCCCACACACCACCATCACCCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCTCGGCTTTGGCTCCTaGACAGCAGAGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GVLGERSPQISSSLWGSRLGFGS*TAESCS
Trigger: TGAACAACTCTCTGCTGTCCAGGAGCCAAAGCCGAG...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 72 bp AAAGCAGTACAGTCAGGCACTTCCCCGCCATCTCTCTaGAATGGCAGTCGGTGGGTGATGGTGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KAVQSGTSPPSL*NGSRWVMVVCG
Trigger: CCCACACACCACCATCACCCACCGACTGCCATTCAAGAGAGATGGCGGGGAAGTGCCTGACTGTACTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 72 bp GCCTCCAGGCTCAGGCTGAAGTTTGTCCTCAGTGGTTaGGTGGGGCTTGGTATACAGGGGCTCCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ASRLRLKFVLSG*VGLGIQGLQKG
Trigger: TCCTTTCTGGAGCCCCTGTATACCAAGCCCCACCAAACCACTGAGGACAAACTTCAGCCTGAGCCTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp ACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTCTGTTCCATCCTAGGTaGATAGAGAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGRGCLSVRLGFLLAESPLFHPR*IERKER
Trigger: CCTCTCCTTCCTCTCTATTCACCTAGGATGGAACAG...AGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCTGTTCCATCCTAGGTaGATAGAGAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GVLGERSPQISSSLWGSRLFHPR*IERKER
Trigger: CCTCTCCTTCCTCTCTATTCACCTAGGATGGAACAG...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTGAGGCAGGTAGAAGGTaGCCATCCCATCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGEAGRR*PSHPPV
Trigger: GACTGGTGGATGGGATGGTCACCTTCTACCTGCCTC...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp GGCTGTCTCTCTGATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTGAGGCAGGTAGAAGGTaGCCATCCCATCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: GCLSDHAGPPEILCLQLVEAGRR*PSHPPV
Trigger: GACTGGTGGATGGGATGGTCACCTTCTACCTGCCTC...AACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATCAGAGAGACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGATTCCCTGGGGGTGTGTaGGTTCTGTCCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGFPGGV*VLSHST
Trigger: TGTGGAGTGGGACAGAACTCACACACCCCCAGGGAA...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTCCAGCAGACGATGAATaGTCCCATGACGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLPADDE*SHDGSQ
Trigger: CTGGCTGCCGTCATGGGAGCATTCATCGTCTGCTGG...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTCTGACTGGGCTTCCCTaGGGGTGTGTGAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLLTGLP*GCVSSV
Trigger: GACAGAACTCACACACCCCCAGGGAAGCCCAGTCAG...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 72 bp CTGTCTCTTCAGACAGTGGCTCCCCCAGTTGCTCCTTaGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAA +
Preference number: 4 (lower is better)
Translates to: LSLQTVAPPVAP*RVLLGVAGGNE
Trigger: TTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAACTGGGGGAGCCACTGTCTGAAGAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp GTTGCTCCTTTGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGCCTCCACAGATGGGGTTCAGGGCTaGATTGGCATAACCCAACCA +
Preference number: 4 (lower is better)
Translates to: VAPLRVLLGVAGGNEASTDGVQG*IGITQP
Trigger: TGGTTGGGTTATGCCAATTCAGCCCTGAACCCCATC...TGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp CACGTTCCCCATTGCCACTGCCAGAGATTCTTGACACGGCACAGTTGGGGTTGTAGCAATTGGTCAGACTaGGGAGCCGACGATTCAAGC +
Preference number: 4 (lower is better)
Translates to: HVPHCHCQRFLTRHSWGCSNWSD*GADDSS
Trigger: GCTTGAATCGTCGGCTCCGCAGTCTGACCAATTGCT...ACAACCCCAACTGTGCCGTGTCAAGAATCTCTGGCAGTGGCAATGGGGAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp ACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTATGTTGCAGAAGACCTaGCCAAAGCTCCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: TGRGCLSVRLGFLLAESPMLQKT*PKLHLK
Trigger: CTTCAAGTGGAGCTTTGGCCAGGTCTTCTGCAACAT...AGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp GGAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCGGTTCAGGGCTGAATTaGCATAACCCAACCATAGGA +
Preference number: 4 (lower is better)
Translates to: GVLGERSPQISSSLWGSRGSGLN*HNPTIG
Trigger: TCCTATGGTTGGGTTATGCCAATTCAGCCCTGAACC...GCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp ACTCGCTTCTCTTCTTTTCTGCTCACATTGAGACCTCGCAGGGAAGCGAGGCTTGGGTGGCGTACAGGATaGGGTTCAGGGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: TRFSSFLLTLRPRREARLGWRTG*GSGLNW
Trigger: CCAATTCAGCCCTGAACCCCATCCTGTACGCCACCC...AAGCCTCGCTTCCCTGCGAGGTCTCAATGTGAGCAGAAAAGAAGAGAAGCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTCTACCTTCTCGGCTTTaGCTCCTGGACAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGLPSRL*LLDSRE
Trigger: CTCTCTGCTGTCCAGGAGCCAAAGCCGAGAAGGTAG...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp ACCTCGCAGGGAAGCGAGGCTTCTCAGTGCTTTATGATAGTATCCTTTGCCCTGCTGACTGGGCTTCCCTaGGGGTGTGTGAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TSQGSEASQCFMIVSFALLTGLP*GCVSSV
Trigger: GACAGAACTCACACACCCCCAGGGAAGCCCAGTCAG...CAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTTCCCTGCGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 72 bp GGGTGTTGCTGGAGGAAACGAAGCCTCCACAGGCTCTaGCAGCAGCTTAGGAGGTTATTGGAGCATATGGTG +
Preference number: 4 (lower is better)
Translates to: GCCWRKRSLHRL*QQLRRLLEHMV
Trigger: CACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCTCCAGCAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp TGCAGTGACTACCTTCAGCATCCAGAGTCACTGGGGTCACAGATGGAAGTGACACCTGCACTTTGCACTTaGAGGTGTCATTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSDYLQHPESLGSQMEVTPALCT*RCHCPL
Trigger: GAGGGGGCAATGACACCTTCAAGTGCAAAGTGCAGG...TGTCACTTCCATCTGTGACCCCAGTGACTCTGGATGCTGAAGGTAGTCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTGCTCGATGGTGACTTTCAATaGAATAGAGTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: FWRRGPLGGAATWGLAVLDGDFQ*NRVQTA
Trigger: TGCTGTTTGGACTCTATTGCATTGAAAGTCACCATC...GAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp CATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCCACAGATATCGGCTGGTGTAGATGTTaGAGAAGACCTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HGRATAMRSPRGEKSTDIGWCRC*RRPGQS
Trigger: GCTTTGGCCAGGTCTTCTGCAACATCTACACCAGCC...GATATCTGTGGACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp AGTATCCTTTGCCCTGCTTGGCAGATGTGCATGTTTTCTATAGAAGCACGTCCACACGGGGTACCGCAGTaGGTCCGTGACAGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: SILCPAWQMCMFSIEARPHGVPQ*VRDSAV
Trigger: TACTGCGCTGTCACGGACCCACTGCGGTACCCCGTG...TGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTTGTCATTGCCCCCTCTaGTCCCATTTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLCHCPL*SHFCCS
Trigger: GGAACAGCAGAAATGGGACCAGAGGGGGCAATGACA...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGGCCAAAGCTCCACTTaGAGGACAACTGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLGQSST*RTTGKW
Trigger: CCATTTACCAGTTGTCCTTCAAGTGGAGCTTTGGCC...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGAGGCCAAAGCTCCACTTaGAGGACAACTGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGGQSST*RTTGKW
Trigger: CCATTTACCAGTTGTCCTTCAAGTGGAGCTTTGGCC...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp GTTGCTCCTTTGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGCCTCCACAGGTAAACGAAGGCAGTaGAGTAAGGAAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VAPLRVLLGVAGGNEASTGKRRQ*SKETSR
Trigger: TCTGCTGGTTTCCTTACTTCACTGCCTTCGTTTACC...TGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTCTCAGGGAAGTTTTGTaGGAGTTGTGGCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLLREVL*ELWLAS
Trigger: GCTTGCAAGCCACAACTCTCACAAAACTTCCCTGAG...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp TGGGGCTTGGTATACAGGGGCTCCAGAAAGGAGATCCAAGTGATAAGGCCAGCACTCAGGGAAGTTTTGTaGGAGTTGTGGCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: WGLVYRGSRKEIQVIRPALREVL*ELWLAS
Trigger: GCTTGCAAGCCACAACTCTCACAAAACTTCCCTGAG...TGCTGGCCTTATCACTTGGATCTCCTTTCTGGAGCCCCTGTATACCAAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp GAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTTGTTTGGTCCCACTCCACACCTaGAGCTTCAGGGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EEKGAFEVMEIALRVPCLVPLHT*SFRGFS
Trigger: GGAGAAGCCCCTGAAGCTTCAGGTGTGGAGTGGGAC...CAAACAAGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTCCAGCAGACGATGAATaGTCCCATGACGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPPADDE*SHDGSQ
Trigger: CTGGCTGCCGTCATGGGAGCATTCATCGTCTGCTGG...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp TGCTATTTCTGCAGGAGCAGGACCAGCTCTTTTACAGGTGAGAAAATTGGGTCTTGCGGAAGTCTCTGTTaGGGGTGGCGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: CYFCRSRTSSFTGEKIGSCGSLC*GWRTGW
Trigger: CCATCCTGTACGCCACCCTCAACAGAGACTTCCGCA...AGACCCAATTTTCTCACCTGTAAAAGAGCTGGTCCTGCTCCTGCAGAAATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp GGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAAGGAGGGATGGTGACTTTCAATaGAATAGAGTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: GGGRRGSWKPKETWVSRRDGDFQ*NRVQTA
Trigger: TGCTGTTTGGACTCTATTGCATTGAAAGTCACCATC...CCTCCTTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTCTCTGGTCCCATTTCTaGTGTTCCATCCTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLLWSHF*CSILGE
Trigger: TTCACCTAGGATGGAACAGCAGAAATGGGACCAGAG...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp TACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTTTGATCCTCTTGGCTTaGTCCCTGGCGATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: YLYRTGRGCLSVRLGFLLLILLA*SLAILK
Trigger: CTTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAA...AAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp CTCAGTGGTTTGGTGGGGCTTGGTATACAGGGGCTCCAGAAAGGAGATCCAAGTTTGATCCTCTTGGCTTaGTCCCTGGCGATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LSGLVGLGIQGLQKGDPSLILLA*SLAILK
Trigger: CTTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAA...ACTTGGATCTCCTTTCTGGAGCCCCTGTATACCAAGCCCCACCAAACCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp GAGTTGAGGTCATGGAAGGGCAACAGCAATGAGGAGTCCTCGGGGAGAGAAGTCTATGGTGCAAGACAATaGTGTTTTCCTGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: ELRSWKGNSNEESSGREVYGARQ*CFPDWA
Trigger: AGCCCAGTCAGGAAAACAGCATTGTCTTGCACCATA...GACTTCTCTCCCCGAGGACTCCTCATTGCTGTTGCCCTTCCATGACCTCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR CCA 90 bp TGGGGCTTGGTATACAGGGGCTCCAGAAAGGAGATCCAAGTGATAAGGCCAGCAAGGACAACTGGTAAATaGCAGAGAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: WGLVYRGSRKEIQVIRPARTTGK*QRRASP
Trigger: TGGTGATGCCCTTCTCTGCCATTTACCAGTTGTCCT...TGCTGGCCTTATCACTTGGATCTCCTTTCTGGAGCCCCTGTATACCAAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp AGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTGGCAGGTTGTCCTGACTGGGCTTCCCTaGGGGTGTGTGAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RLQKKVYMCRNLLMWQVVLTGLP*GCVSSV
Trigger: GACAGAACTCACACACCCCCAGGGAAGCCCAGTCAG...GACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 72 bp AGCCTCCACAGGCTCTTGCAGCAGCTTAGGAGGTTATaGGAGCATATGGTGCAAGACAATGCTGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SLHRLLQQLRRL*EHMVQDNAVFP
Trigger: GGGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp TGCTATTTCTGCAGGAGCAGGACCAGCTCTTTTACAGGTGAGAAAATTGGGTCTCCTGCACTTTGCACTTaGAGGTGTCATTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: CYFCRSRTSSFTGEKIGSPALCT*RCHCPL
Trigger: GAGGGGGCAATGACACCTTCAAGTGCAAAGTGCAGG...AGACCCAATTTTCTCACCTGTAAAAGAGCTGGTCCTGCTCCTGCAGAAATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR TCA 90 bp TCTCGCCAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGGAGGCAGGTAGAAGGTaGCCATCCCATCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: SRQLHLLESLSHSLTIEREAGRR*PSHPPV
Trigger: GACTGGTGGATGGGATGGTCACCTTCTACCTGCCTC...CCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGGCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp TCTCGCCAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGTTCCCTGGGGGTGTGTaGGTTCTGTCCCACTCCACA +
Preference number: 4 (lower is better)
Translates to: SRQLHLLESLSHSLTIERFPGGV*VLSHST
Trigger: TGTGGAGTGGGACAGAACTCACACACCCCCAGGGAA...CCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGGCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp GGTTGTGTGGAGGACAGCAAGTCACAAAGAGGGCTGGAAAACCACATAAAAGGTAGCAATTGGTCAGACTaGGGAGCCGACGATTCAAGC +
Preference number: 4 (lower is better)
Translates to: GCVEDSKSQRGLENHIKGSNWSD*GADDSS
Trigger: GCTTGAATCGTCGGCTCCGCAGTCTGACCAATTGCT...ACCTTTTATGTGGTTTTCCAGCCCTCTTTGTGACTTGCTGTCCTCCACACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp GAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTTGTTTGAAATCGTGGTCTGTCTaGTCCCTGACTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EEKGAFEVMEIALRVPCLKSWSV*SLTGLP
Trigger: GGGAAGCCCAGTCAGGGAGCAGACAGACCACGATTT...CAAACAAGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp CACACTACCCTGACTCTCAGTTTCCATCTCTGTAAAGACTGGAGAGTGATGCTTCTACCTTCTCGGCTTTaGCTCCTGGACAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HTTLTLSFHLCKDWRVMLLPSRL*LLDSRE
Trigger: CTCTCTGCTGTCCAGGAGCCAAAGCCGAGAAGGTAG...AAGCATCACTCTCCAGTCTTTACAGAGATGGAAACTGAGAGTCAGGGTAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp TGTAGGCAAAGTATCTGGAACTTAGTTAGGTGTCCATGGAGGGCAATTTCTTTCTGTCTGCTCCCTGACTaGGCTTCCCTGGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CRQSIWNLVRCPWRAISFCLLPD*ASLGVC
Trigger: ACACACCCCCAGGGAAGCCCAGTCAGGGAGCAGACA...GAAAGAAATTGCCCTCCATGGACACCTAACTAAGTTCCAGATACTTTGCCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
3UTR CAA 72 bp TCTGTCTGTGCTTTCCTGGGACTCAGTAGACACACTTaGCCCCACAAGCCCACTGTACACTACTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SVCAFLGLSRHT*PHKPTVHYFLL
Trigger: CAACAAGAAGTAGTGTACAGTGGGCTTGTGGGGCAAAGTGTGTCTACTGAGTCCCAGGAAAGCACAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 72 bp GTGAGTGTAGGAAAGAGATCTAAGCAGCTTTTCCAGTaGTCCCGATGGAGACTACAGCAGCAGGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: VSVGKRSKQLFQ*SRWRLQQQGHV
Trigger: CACATGACCCTGCTGCTGTAGTCTCCATCGGGACAACTGGAAAAGCTGCTTAGATCTCTTTCCTACACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGTATCAGCCTGCACTTTGCACTTaGAGGTGTCATTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGGLAELRNCLGFSSEYQPALCT*RCHCPL
Trigger: GAGGGGGCAATGACACCTTCAAGTGCAAAGTGCAGG...CTGATACTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp GCCAGCACCAACATGAGCTTTGAACCCAAGGAATTCTGCCTAAGGATTTTAACCGATGGGGTTCAGGGCTaGATTGGCATAACCCAACCA +
Preference number: 4 (lower is better)
Translates to: ASTNMSFEPKEFCLRILTDGVQG*IGITQP
Trigger: TGGTTGGGTTATGCCAATTCAGCCCTGAACCCCATC...GGTTAAAATCCTTAGGCAGAATTCCTTGGGTTCAAAGCTCATGTTGGTGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp TGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTCTCAGGGAAGTTTTGTaGGAGTTGTGGCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CPEEKGAFEVMEIALRVPLREVL*ELWLAS
Trigger: GCTTGCAAGCCACAACTCTCACAAAACTTCCCTGAG...AGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGTAAGGTACCTTTGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGCCCCATTCCTTCCTGTaGTGGTGTCCTTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SKVPLKYADGGDPVSHALPHSFL*WCPFCL
Trigger: GAGACAGAAAGGACACCATCACAGGAAGGAATGGGG...CAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR GCA 90 bp CTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGGGCTGGTGTAGATGTTaGAGAAGACCTGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LARGGLAELRNCLGFSSEGWCRC*RRPGQS
Trigger: GCTTTGGCCAGGTCTTCTGCAACATCTACACCAGCC...CTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp CAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGGAGTCTCCAGCAGACGATGAATaGTCCCATGACGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QLHLLESLSHSLTIERESPADDE*SHDGSQ
Trigger: CTGGCTGCCGTCATGGGAGCATTCATCGTCTGCTGG...AGACTCCCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp CTAAGACTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTGGTCCTTCTGGGTGTTaGTGGAGGAAACGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LRLARGGLAELRNCLGFSGPSGC*WRKRSL
Trigger: GAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACC...AGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR CCA 90 bp AGTAAGGTACCTTTGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGTGTCATTGCCCCCTCTaGTCCCATTTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SKVPLKYADGGDPVSHALCHCPL*SHFCCS
Trigger: GGAACAGCAGAAATGGGACCAGAGGGGGCAATGACA...CAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp GGTTGTGTGGAGGACAGCAAGTCACAAAGAGGGCTGGAAAACCACATAAAAGGTTTCCAGGAGCTGATGTaGTTGATCCTCTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GCVEDSKSQRGLENHIKGFQELM*LILLAC
Trigger: GCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAA...ACCTTTTATGTGGTTTTCCAGCCCTCTTTGTGACTTGCTGTCCTCCACACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp CTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGCAGTGGAAGAGCTGTTaGTACGCCATGCGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LARGGLAELRNCLGFSSEQWKSC*YAMRKS
Trigger: AGACTTCCGCATGGCGTACCAACAGCTCTTCCACTG...CTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp GAAGAGAAAGGAGCATTTGAGGTCATGGAAATAGCACTCCGAGTGCCTTGTTTGCTCGGCTTTGGCTCCTaGACAGCAGAGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EEKGAFEVMEIALRVPCLLGFGS*TAESCS
Trigger: TGAACAACTCTCTGCTGTCCAGGAGCCAAAGCCGAG...CAAACAAGGCACTCGGAGTGCTATTTCCATGACCTCAAATGCTCCTTTCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp AGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGTATCAGCTACCTTCTCGGCTTTaGCTCCTGGACAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RGGLAELRNCLGFSSEYQLPSRL*LLDSRE
Trigger: CTCTCTGCTGTCCAGGAGCCAAAGCCGAGAAGGTAG...CTGATACTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp GGCTGTCTCTCTGATCACGCAGGTCCACCAGAGATCTTGTGCCTCCAGTTAGTTAGCTTAGGAGGTTATTaGAGCATATGGTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: GCLSDHAGPPEILCLQLVSLGGY*SIWCKT
Trigger: TGTCTTGCACCATATGCTCCAATAACCTCCTAAGCT...AACTAACTGGAGGCACAAGATCTCTGGTGGACCTGCGTGATCAGAGAGACAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR TCA 90 bp CTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGGGCCAAAGCTCCACTTaGAGGACAACTGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: LARGGLAELRNCLGFSSEGQSST*RTTGKW
Trigger: CCATTTACCAGTTGTCCTTCAAGTGGAGCTTTGGCC...CTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTGGCAGGTTGTCCTGTTCCATCCTAGGTaGATAGAGAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLQKKVYMCRNLLMWQVVLFHPR*IERKER
Trigger: CCTCTCCTTCCTCTCTATTCACCTAGGATGGAACAG...GACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp GAATTCTGCCTAAGGATTTTAACCTGTCTGAAATCTGCTCCCAGGGAAGATGTTACAATGCTGTTTTCCTaGCTGGGCTTCCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: EFCLRILTCLKSAPREDVTMLFS*LGFPGG
Trigger: ACCCCCAGGGAAGCCCAGTCAGGAAAACAGCATTGT...AACATCTTCCCTGGGAGCAGATTTCAGACAGGTTAAAATCCTTAGGCAGAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR CCA 90 bp CTAAGACTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTCAGTGGAAGAGCTGTTaGTACGCCATGCGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LRLARGGLAELRNCLGFSQWKSC*YAMRKS
Trigger: AGACTTCCGCATGGCGTACCAACAGCTCTTCCACTG...AGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAGTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp TCTCGCCAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGCTTGCAAGCTTGCAGTaGAAGAGCTGTTGGTACGCC +
Preference number: 4 (lower is better)
Translates to: SRQLHLLESLSHSLTIERLASLQ*KSCWYA
Trigger: GGCGTACCAACAGCTCTTCCACTGCAAGCTTGCAAG...CCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGGCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp AGTAAGGTACCTTTGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGGGTAAACGAAGGCAGTaGAGTAAGGAAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SKVPLKYADGGDPVSHALGKRRQ*SKETSR
Trigger: TCTGCTGGTTTCCTTACTTCACTGCCTTCGTTTACC...CAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp TGCAGTGACTACCTTCAGCATCCAGAGTCACTGGGGTCACAGATGGAAGTGACAGATGGTGACTTTCAATaGAATAGAGTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: CSDYLQHPESLGSQMEVTDGDFQ*NRVQTA
Trigger: TGCTGTTTGGACTCTATTGCATTGAAAGTCACCATC...TGTCACTTCCATCTGTGACCCCAGTGACTCTGGATGCTGAAGGTAGTCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp AGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGTATCAGGTGAGAGTTGTGGCTTaGAAGCTTGCAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RGGLAELRNCLGFSSEYQVRVVA*KLAVEE
Trigger: CTCTTCCACTGCAAGCTTGCAAGCCACAACTCTCAC...CTGATACTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp AGTAAGGTACCTTTGAAGTATGCAGATGGAGGTGACCCAGTGTCTCATGCTTTGATGTTGCAGAAGACCTaGCCAAAGCTCCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: SKVPLKYADGGDPVSHALMLQKT*PKLHLK
Trigger: CTTCAAGTGGAGCTTTGGCCAGGTCTTCTGCAACAT...CAAAGCATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp GAATTCTGCCTAAGGATTTTAACCTGTCTGAAATCTGCTCCCAGGGAAGATGTTTGTCATTGCCCCCTCTaGTCCCATTTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: EFCLRILTCLKSAPREDVCHCPL*SHFCCS
Trigger: GGAACAGCAGAAATGGGACCAGAGGGGGCAATGACA...AACATCTTCCCTGGGAGCAGATTTCAGACAGGTTAAAATCCTTAGGCAGAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp AGTATCCTTTGCCCTGCTTGGCAGATGTGCATGTTTTCTATAGAAGCACGTCCAGGTTCAGGGCTGAATTaGCATAACCCAACCATAGGA +
Preference number: 4 (lower is better)
Translates to: SILCPAWQMCMFSIEARPGSGLN*HNPTIG
Trigger: TCCTATGGTTGGGTTATGCCAATTCAGCCCTGAACC...TGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp TTCCAAGAGGGTAAAGGGAGGCTAAGAAGGTCATGGAACTTACAAGAAACTTTCCTTGCAAGCTTGCAGTaGAAGAGCTGTTGGTACGCC +
Preference number: 4 (lower is better)
Translates to: FQEGKGRLRRSWNLQETFLASLQ*KSCWYA
Trigger: GGCGTACCAACAGCTCTTCCACTGCAAGCTTGCAAG...GAAAGTTTCTTGTAAGTTCCATGACCTTCTTAGCCTCCCTTTACCCTCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp CAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGGAGTCTTGTCTCTTCAGACAGTaGCTCCCCCAGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QLHLLESLSHSLTIERESCLFRQ*LPQLLL
Trigger: AAGGAGCAACTGGGGGAGCCACTGTCTGAAGAGACA...AGACTCCCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR TCA 90 bp TTCCAAGAGGGTAAAGGGAGGCTAAGAAGGTCATGGAACTTACAAGAAACTTTCAGGAGACAACTTGAGTaGCTCAGTCGTGTCCTGACT +
Preference number: 4 (lower is better)
Translates to: FQEGKGRLRRSWNLQETFRRQLE*LSRVLT
Trigger: AGTCAGGACACGACTGAGTCACTCAAGTTGTCTCCT...GAAAGTTTCTTGTAAGTTCCATGACCTTCTTAGCCTCCCTTTACCCTCTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp AGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGTATCAGCTCTGGTCCCATTTCTaGTGTTCCATCCTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RGGLAELRNCLGFSSEYQLWSHF*CSILGE
Trigger: TTCACCTAGGATGGAACAGCAGAAATGGGACCAGAG...CTGATACTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp CTAAGACTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTCTCTGGTCCCATTTCTaGTGTTCCATCCTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LRLARGGLAELRNCLGFSLWSHF*CSILGE
Trigger: TTCACCTAGGATGGAACAGCAGAAATGGGACCAGAG...AGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp TTCCAAGAGGGTAAAGGGAGGCTAAGAAGGTCATGGAACTTACAAGAAACTTTCGTGAGAGTTGTGGCTTaGAAGCTTGCAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FQEGKGRLRRSWNLQETFVRVVA*KLAVEE
Trigger: CTCTTCCACTGCAAGCTTGCAAGCCACAACTCTCAC...GAAAGTTTCTTGTAAGTTCCATGACCTTCTTAGCCTCCCTTTACCCTCTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTGCCTCCACAGGCTCTTaGAGCAGCTTAGGAGGTTAT +
Preference number: 4 (lower is better)
Translates to: LIKILSGHLWELSGQITPASTGS*SSLGGY
Trigger: ATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGC...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR CCA 90 bp TGGCTCCTAGCACTCTGCTGTAAACAGCTTCAGTGTTACATAAATACCAGTGTCGGTTCAGGGCTGAATTaGCATAACCCAACCATAGGA +
Preference number: 4 (lower is better)
Translates to: WLLALCCKQLQCYINTSVGSGLN*HNPTIG
Trigger: TCCTATGGTTGGGTTATGCCAATTCAGCCCTGAACC...GACACTGGTATTTATGTAACACTGAAGCTGTTTACAGCAGAGTGCTAGGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
3UTR CAA 72 bp GTGGGTAGTTGTGGACTTGTTAACAGTAAGGTACCTTaGAAGTATGCAGATGGAGGTGACCCAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VGSCGLVNSKVP*KYADGGDPVSH
Trigger: ATGAGACACTGGGTCACCTCCATCTGCATACTTCAAAGGTACCTTACTGTTAACAAGTCCACAACTACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR TCA 90 bp TTCCAAGAGGGTAAAGGGAGGCTAAGAAGGTCATGGAACTTACAAGAAACTTTCGGTAAACGAAGGCAGTaGAGTAAGGAAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FQEGKGRLRRSWNLQETFGKRRQ*SKETSR
Trigger: TCTGCTGGTTTCCTTACTTCACTGCCTTCGTTTACC...GAAAGTTTCTTGTAAGTTCCATGACCTTCTTAGCCTCCCTTTACCCTCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR GCA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTGTGAGAGTTGTGGCTTaGAAGCTTGCAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LIKILSGHLWELSGQITPVRVVA*KLAVEE
Trigger: CTCTTCCACTGCAAGCTTGCAAGCCACAACTCTCAC...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp TTCCAAGAGGGTAAAGGGAGGCTAAGAAGGTCATGGAACTTACAAGAAACTTTCAGGACAACTGGTAAATaGCAGAGAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: FQEGKGRLRRSWNLQETFRTTGK*QRRASP
Trigger: TGGTGATGCCCTTCTCTGCCATTTACCAGTTGTCCT...GAAAGTTTCTTGTAAGTTCCATGACCTTCTTAGCCTCCCTTTACCCTCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CCA 90 bp CTCATGATGTCAAGTTGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATATTCCAGGAGCTGATGTaGTTGATCCTCTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LMMSSCPEEKGAFEVMEIFQELM*LILLAC
Trigger: GCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAA...TATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACAACTTGACATCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR GCA 90 bp TTGATAAAGATACTCAGTGGTCATCTCTGGGAGTTATCAGGCCAAATTACTCCTTTGATCCTCTTGGCTTaGTCCCTGGCGATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LIKILSGHLWELSGQITPLILLA*SLAILK
Trigger: CTTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAA...AGGAGTAATTTGGCCTGATAACTCCCAGAGATGACCACTGAGTATCTTTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CCA 90 bp CTCATGATGTCAAGTTGTCCAGAAGAGAAAGGAGCATTTGAGGTCATGGAAATAAGGACAACTGGTAAATaGCAGAGAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: LMMSSCPEEKGAFEVMEIRTTGK*QRRASP
Trigger: TGGTGATGCCCTTCTCTGCCATTTACCAGTTGTCCT...TATTTCCATGACCTCAAATGCTCCTTTCTCTTCTGGACAACTTGACATCATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
3UTR CAA 72 bp ATGTCTAAGTGGGTCTCTTGGGCTTTCAGAGGGAATTaGATAAAGATACTCAGTGGTCATCTCTGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: MSKWVSWAFRGN*IKILSGHLWEL
Trigger: TAACTCCCAGAGATGACCACTGAGTATCTTTATCAAATTCCCTCTGAAAGCCCAAGAGACCCACTTAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS GCA 90 bp GGCAGAGAAGGGCATCACCAGGAGGCCAAGAAGCAGGTCAGTGGCTaGCAGGGACACAATGAAGCAATTGGTCAGACTGCGGAGCCGACG +
Preference number: 5 (lower is better)
Translates to: GREGHHQEAKKQVSG*QGHNEAIGQTAEPT
Trigger: CGTCGGCTCCGCAGTCTGACCAATTGCTTCATTGTGTCCCTGGCAGCCACTGACCTGCTTCTTGGCCTCCTGGTGATGCCCTTCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CCA 90 bp AGAGATGGCAACGCGAACAGGGGTGACCAACACGGGGTACCGCAGTaGGTCCGTGACAGCGCAGTAGCGGTCCAAGCTGATCATGAAGAG +
Preference number: 5 (lower is better)
Translates to: RDGNANRGDQHGVPQ*VRDSAVAVQADHEE
Trigger: CTCTTCATGATCAGCTTGGACCGCTACTGCGCTGTCACGGACCCACTGCGGTACCCCGTGTTGGTCACCCCTGTTCGCGTTGCCATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS GCA 90 bp GACGGCAGCCAGGGTCACGGTGGCTTTGTGTTCTCTGATGGTGGCTaGCTTCCAGGAGCTGATGTGGTTGATCCTCTTGGCTTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: DGSQGHGGFVFSDGG*LPGADVVDPLGLLP
Trigger: AGGGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAAGGCAGCCACCATCAGAGAACACAAAGCCACCGTGACCCTGGCTGCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTGCTCAGGCAGACGACCACATaGCCAGCAACAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: FWRRGPLGGAATWGLAVLRQTTT*PATVMK
Trigger: CTTCATCACTGTTGCTGGCAATGTGGTCGTCTGCCT...GAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS TCA 90 bp CAGCTTCCAGATGAAGGACAGGAGGCTCAGGCTCAGGAGACAACTTaGGTGACTCAGTCGTGTCCTGACTGGGCTTCCCTGGGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: QLPDEGQEAQAQETT*VTQSCPDWASLGVC
Trigger: ACACACCCCCAGGGAAGCCCAGTCAGGACACGACTGAGTCACTCAAGTTGTCTCCTGAGCCTGAGCCTCCTGTCCTTCATCTGGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp GAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCATGTGGTTGATCCTCTaGGCTTGCTCCCTGGCGATC +
Preference number: 5 (lower is better)
Translates to: ESSGREVHRYPLLSGALAMWLIL*ACSLAI
Trigger: GATCGCCAGGGAGCAAGCCAAGAGGATCAACCACAT...GGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp GGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAAGGAGGAGGGTCACGGTGGCTTaGTGTTCTCTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GGGRRGSWKPKETWVSRRRVTVA*CSLMVA
Trigger: AGCCACCATCAGAGAACACAAAGCCACCGTGACCCT...CCTCCTTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp ACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTGCAGAGTCACCTCACTTGAAGGTGTCATaGCCCCCTCTGGTCCCATTT +
Preference number: 5 (lower is better)
Translates to: TGRGCLSVRLGFLLAESPHLKVS*PPLVPF
Trigger: AAATGGGACCAGAGGGGGCAATGACACCTTCAAGTG...AGGTGACTCTGCAAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp TTCTGGAGAAGGGGACCCTTGGGTGGTGCAGCCACTTGGGGACTGGCAGTGCTCTCGTTGACCTGCACTTaGCACTTGAAGGTGTCATTG +
Preference number: 5 (lower is better)
Translates to: FWRRGPLGGAATWGLAVLSLTCT*HLKVSL
Trigger: CAATGACACCTTCAAGTGCAAAGTGCAGGTCAACGA...GAGCACTGCCAGTCCCCAAGTGGCTGCACCACCCAAGGGTCCCCTTCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp CACGTTCCCCATTGCCACTGCCAGAGATTCTTGACACGGCACAGTTGGGGTTGTATGTGGTTGATCCTCTaGGCTTGCTCCCTGGCGATC +
Preference number: 5 (lower is better)
Translates to: HVPHCHCQRFLTRHSWGCMWLIL*ACSLAI
Trigger: GATCGCCAGGGAGCAAGCCAAGAGGATCAACCACAT...ACAACCCCAACTGTGCCGTGTCAAGAATCTCTGGCAGTGGCAATGGGGAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp GTTGCTCCTTTGAGGGTCCTTCTGGGTGTTGCTGGAGGAAACGAAGCCTCCACAAGGGTCACGGTGGCTTaGTGTTCTCTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VAPLRVLLGVAGGNEASTRVTVA*CSLMVA
Trigger: AGCCACCATCAGAGAACACAAAGCCACCGTGACCCT...TGTGGAGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCCTCAAAGGAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp GGCGTGGAGGCGGCAGGAGAGGGTCTTGGAAACCCAAGGAAACCTGGGTATCAATGTGAGAGTTGTGGCTaGCAAGCTTGCAGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GVEAAGEGLGNPRKPGYQCESCG*QACSGR
Trigger: TCTTCCACTGCAAGCTTGCAAGCCACAACTCTCACA...TTGATACCCAGGTTTCCTTGGGTTTCCAAGACCCTCTCCTGCCGCCTCCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CTCAGTGGTTTGGTGGGGCTTGGTATACAGGGGCTCCAGAAAGGAGATCCAAGTGGGTCCTTCTGGGTGTaGCTGGAGGAAACGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LSGLVGLGIQGLQKGDPSGSFWV*LEETKP
Trigger: AGGCTTCGTTTCCTCCAGCAACACCCAGAAGGACCC...ACTTGGATCTCCTTTCTGGAGCCCCTGTATACCAAGCCCCACCAAACCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS-3UTR CAA 90 bp GAGTCCTCGGGGAGAGAAGTCCACAGATATCCTCTTCTCTCTGGGGCTCTCGCCTCGTTGACCTGCACTTaGCACTTGAAGGTGTCATTG +
Preference number: 5 (lower is better)
Translates to: ESSGREVHRYPLLSGALASLTCT*HLKVSL
Trigger: CAATGACACCTTCAAGTGCAAAGTGCAGGTCAACGA...GGCGAGAGCCCCAGAGAGAAGAGGATATCTGTGGACTTCTCTCCCCGAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTCAGGAGCTGATGTGGTaGATCCTCTTGGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGQELMW*ILLACS
Trigger: GGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTG...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp GTGGCAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAACAGGAGCTGATGTGGTaGATCCTCTTGGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: VARAWYRKGQNRQGGNPQQELMW*ILLACS
Trigger: GGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTG...TTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CAGATACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTAGGGTCACGGTGGCTTaGTGTTCTCTGATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: QIPLQNRPRLPVCKAGVLRVTVA*CSLMVA
Trigger: AGCCACCATCAGAGAACACAAAGCCACCGTGACCCT...AAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp CTGTGCCCTGTGGCTTTAGCATGGGGCACACACAGGACAAGACCTACTTATGGTATGCGGAAGTCTCTGTaGAGGGTGGCGTACAGGATG +
Preference number: 5 (lower is better)
Translates to: LCPVALAWGTHRTRPTYGMRKSL*RVAYRM
Trigger: CATCCTGTACGCCACCCTCAACAGAGACTTCCGCAT...ACCATAAGTAGGTCTTGTCCTGTGTGTGCCCCATGCTAAAGCCACAGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS GCA 90 bp ACGGTAAACGAAGGCAGTGAAGTAAGGAAACCAGCAGACGATGAATaGTCCCATGACGGCAGCCAGGGTCACGGTGGCTTTGTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TVNEGSEVRKPADDE*SHDGSQGHGGFVFS
Trigger: AGAGAACACAAAGCCACCGTGACCCTGGCTGCCGTCATGGGAGCATTCATCGTCTGCTGGTTTCCTTACTTCACTGCCTTCGTTTACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGAAGGCAGACGACCACATaGCCAGCAACAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGRQTTT*PATVMK
Trigger: CTTCATCACTGTTGCTGGCAATGTGGTCGTCTGCCT...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CCA 90 bp GTGGCTTTGTGTTCTCTGATGGTGGCTGCCTTCCAGGAGCTGATGTaGTTGATCCTCTTGGCTTGCTCCCTGGCGATCTTAAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: VALCSLMVAAFQELM*LILLACSLAILKIL
Trigger: CAGAATCTTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAAGGCAGCCACCATCAGAGAACACAAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp ACCTCGCAGGGAAGCGAGGCTTCTCAGTGCTTTATGATAGTATCCTTTGCCCTGAGGCAGACGACCACATaGCCAGCAACAGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TSQGSEASQCFMIVSFALRQTTT*PATVMK
Trigger: CTTCATCACTGTTGCTGGCAATGTGGTCGTCTGCCT...CAGGGCAAAGGATACTATCATAAAGCACTGAGAAGCCTCGCTTCCCTGCGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp ACTCGCTTCTCTTCTTTTCTGCTCACATTGAGACCTCGCAGGGAAGCGAGGCTTCACTTGAAGGTGTCATaGCCCCCTCTGGTCCCATTT +
Preference number: 5 (lower is better)
Translates to: TRFSSFLLTLRPRREARLHLKVS*PPLVPF
Trigger: AAATGGGACCAGAGGGGGCAATGACACCTTCAAGTG...AAGCCTCGCTTCCCTGCGAGGTCTCAATGTGAGCAGAAAAGAAGAGAAGCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CAAGGGCCTGGTATAGGAAGGGTCAGAACAGACAAGGAGGAAATCCCCAAGGGAGTTGATCCTCTTGGCTaGCTCCCTGGCGATCTTAAA +
Preference number: 5 (lower is better)
Translates to: QGPGIGRVRTDKEEIPKGVDPLG*LPGDLK
Trigger: TTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAAC...TCCCTTGGGGATTTCCTCCTTGTCTGTTCTGACCCTTCCTATACCAGGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp TACCTTTACAGAACAGGCCGAGGCTGCCTGTCTGTAAGGCTGGGGTTCTTGCTTTGTGAGAGTTGTGGCTaGCAAGCTTGCAGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: YLYRTGRGCLSVRLGFLLCESCG*QACSGR
Trigger: TCTTCCACTGCAAGCTTGCAAGCCACAACTCTCACA...AAGCAAGAACCCCAGCCTTACAGACAGGCAGCCTCGGCCTGTTCTGTAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS TCA 90 bp TGGCTCCTGGACAGCAGAGAGTTGTTCAACCTCAGGGAAGTTTTGTaGGAGTTGTGGCTTGCAAGCTTGCAGTGGAAGAGCTGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: WLLDSRELFNLREVL*ELWLASLQWKSCWY
Trigger: GTACCAACAGCTCTTCCACTGCAAGCTTGCAAGCCACAACTCTCACAAAACTTCCCTGAGGTTGAACAACTCTCTGCTGTCCAGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp AGTATCCTTTGCCCTGCTTGGCAGATGTGCATGTTTTCTATAGAAGCACGTCCACAGGAGCTGATGTGGTaGATCCTCTTGGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SILCPAWQMCMFSIEARPQELMW*ILLACS
Trigger: GGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTG...TGGACGTGCTTCTATAGAAAACATGCACATCTGCCAAGCAGGGCAAAGGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CTTGCTAGAGGAGGGTTAGCTGAGTTAAGGAATTGTCTTGGCTTCTCTTCTGAGATGCGGAAGTCTCTGTaGAGGGTGGCGTACAGGATG +
Preference number: 5 (lower is better)
Translates to: LARGGLAELRNCLGFSSEMRKSL*RVAYRM
Trigger: CATCCTGTACGCCACCCTCAACAGAGACTTCCGCAT...CTCAGAAGAGAAGCCAAGACAATTCCTTAACTCAGCTAACCCTCCTCTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp TGGCTCCTAGCACTCTGCTGTAAACAGCTTCAGTGTTACATAAATACCAGTGTCGGCTCAGGAGACAACTaGAGTGACTCAGTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: WLLALCCKQLQCYINTSVGSGDN*SDSVVS
Trigger: GGACACGACTGAGTCACTCAAGTTGTCTCCTGAGCC...GACACTGGTATTTATGTAACACTGAAGCTGTTTACAGCAGAGTGCTAGGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp TGCTATTTCTGCAGGAGCAGGACCAGCTCTTTTACAGGTGAGAAAATTGGGTCTGTTGATCCTCTTGGCTaGCTCCCTGGCGATCTTAAA +
Preference number: 5 (lower is better)
Translates to: CYFCRSRTSSFTGEKIGSVDPLG*LPGDLK
Trigger: TTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAAC...AGACCCAATTTTCTCACCTGTAAAAGAGCTGGTCCTGCTCCTGCAGAAATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS-3UTR CAA 90 bp TGTAGGCAAAGTATCTGGAACTTAGTTAGGTGTCCATGGAGGGCAATTTCTTTCATGTGGTTGATCCTCTaGGCTTGCTCCCTGGCGATC +
Preference number: 5 (lower is better)
Translates to: CRQSIWNLVRCPWRAISFMWLIL*ACSLAI
Trigger: GATCGCCAGGGAGCAAGCCAAGAGGATCAACCACAT...GAAAGAAATTGCCCTCCATGGACACCTAACTAAGTTCCAGATACTTTGCCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp CAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGGAGTCTATGCGGAAGTCTCTGTaGAGGGTGGCGTACAGGATG +
Preference number: 5 (lower is better)
Translates to: QLHLLESLSHSLTIERESMRKSL*RVAYRM
Trigger: CATCCTGTACGCCACCCTCAACAGAGACTTCCGCAT...AGACTCCCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp AGGCTCCAGAAGAAAGTTTACATGTGCAGGAATCTTCTGATGTGGCAGGTTGTCTGTGAGAGTTGTGGCTaGCAAGCTTGCAGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RLQKKVYMCRNLLMWQVVCESCG*QACSGR
Trigger: TCTTCCACTGCAAGCTTGCAAGCCACAACTCTCACA...GACAACCTGCCACATCAGAAGATTCCTGCACATGTAAACTTTCTTCTGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp TCTCGCCAACTCCACCTCCTTGAATCTCTCAGTCATTCTCTAACTATAGAAAGGGTTGATCCTCTTGGCTaGCTCCCTGGCGATCTTAAA +
Preference number: 5 (lower is better)
Translates to: SRQLHLLESLSHSLTIERVDPLG*LPGDLK
Trigger: TTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAAC...CCTTTCTATAGTTAGAGAATGACTGAGAGATTCAAGGAGGTGGAGTTGGCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS-3UTR CAA 90 bp TGTAGGCAAAGTATCTGGAACTTAGTTAGGTGTCCATGGAGGGCAATTTCTTTCTCGTTGACCTGCACTTaGCACTTGAAGGTGTCATTG +
Preference number: 5 (lower is better)
Translates to: CRQSIWNLVRCPWRAISFSLTCT*HLKVSL
Trigger: CAATGACACCTTCAAGTGCAAAGTGCAGGTCAACGA...GAAAGAAATTGCCCTCCATGGACACCTAACTAAGTTCCAGATACTTTGCCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CCA 72 bp AACGCGAACAGGGGTGACCAACACGGGGTACCGCAGTaGGTCCGTGACAGCGCAGTAGCGGTCCAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: NANRGDQHGVPQ*VRDSAVAVQAD
Trigger: ATCAGCTTGGACCGCTACTGCGCTGTCACGGACCCACTGCGGTACCCCGTGTTGGTCACCCCTGTTCGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS TCA 72 bp AAGGACAGGAGGCTCAGGCTCAGGAGACAACTTGAGTaGCTCAGTCGTGTCCTGACTGGGCTTCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: KDRRLRLRRQLE*LSRVLTGLPWG
Trigger: CCCCCAGGGAAGCCCAGTCAGGACACGACTGAGTCACTCAAGTTGTCTCCTGAGCCTGAGCCTCCTGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038101.4
CDS CAA 72 bp AATGCTCCCATGACGGCAGCCAGGGTCACGGTGGCTTaGTGTTCTCTGATGGTGGCTGCCTTCCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: NAPMTAARVTVA*CSLMVAAFQEL
Trigger: CAGCTCCTGGAAGGCAGCCACCATCAGAGAACACAAAGCCACCGTGACCCTGGCTGCCGTCATGGGAGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp CTGCGGAGCCGACGATTCAAGCTGACAGCCAGGCAGACGACCACATaGCCAGCAACAGTGATGAAGATGAGGGTGGTGAGGACCACACTG +
Preference number: 6 (lower is better)
Translates to: LRSRRFKLTARQTTT*PATVMKMRVVRTTL
Trigger: CAGTGTGGTCCTCACCACCCTCATCTTCATCACTGTTGCTGGCAATGTGGTCGTCTGCCTGGCTGTCAGCTTGAATCGTCGGCTCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp CAGACGATGAATGCTCCCATGACGGCAGCCAGGGTCACGGTGGCTTaGTGTTCTCTGATGGTGGCTGCCTTCCAGGAGCTGATGTGGTTG +
Preference number: 6 (lower is better)
Translates to: QTMNAPMTAARVTVA*CSLMVAAFQELMWL
Trigger: CAACCACATCAGCTCCTGGAAGGCAGCCACCATCAGAGAACACAAAGCCACCGTGACCCTGGCTGCCGTCATGGGAGCATTCATCGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CCA 72 bp GAGTTGTGGCTTGCAAGCTTGCAGTGGAAGAGCTGTTaGTACGCCATGCGGAAGTCTCTGTTGAGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: ELWLASLQWKSC*YAMRKSLLRVA
Trigger: CGCCACCCTCAACAGAGACTTCCGCATGGCGTACCAACAGCTCTTCCACTGCAAGCTTGCAAGCCACAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 72 bp CGACGATTCAAGCTGACAGCCAGGCAGACGACCACATaGCCAGCAACAGTGATGAAGATGAGGGTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RRFKLTARQTTT*PATVMKMRVVR
Trigger: CCTCACCACCCTCATCTTCATCACTGTTGCTGGCAATGTGGTCGTCTGCCTGGCTGTCAGCTTGAATCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 72 bp AGCAGGTCAGTGGCTGCCAGGGACACAATGAAGCAATaGGTCAGACTGCGGAGCCGACGATTCAAGCTGACA +
Preference number: 6 (lower is better)
Translates to: SRSVAARDTMKQ*VRLRSRRFKLT
Trigger: TGTCAGCTTGAATCGTCGGCTCCGCAGTCTGACCAATTGCTTCATTGTGTCCCTGGCAGCCACTGACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 72 bp AGAGTTGTGGCTTGCAAGCTTGCAGTGGAAGAGCTGTaGGTACGCCATGCGGAAGTCTCTGTTGAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RVVACKLAVEEL*VRHAEVSVEGG
Trigger: GCCACCCTCAACAGAGACTTCCGCATGGCGTACCAACAGCTCTTCCACTGCAAGCTTGCAAGCCACAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 72 bp CCATCCACCAGTCCATATACCTCGTTGACCTGCACTTaGCACTTGAAGGTGTCATTGCCCCCTCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: PSTSPYTSLTCT*HLKVSLPPLVP
Trigger: TGGGACCAGAGGGGGCAATGACACCTTCAAGTGCAAAGTGCAGGTCAACGAGGTATATGGACTGGTGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp GTGACCATCCCATCCACCAGTCCATATACCTCGTTGACCTGCACTTaGCACTTGAAGGTGTCATTGCCCCCTCTGGTCCCATTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: VTIPSTSPYTSLTCT*HLKVSLPPLVPFLL
Trigger: CAGCAGAAATGGGACCAGAGGGGGCAATGACACCTTCAAGTGCAAAGTGCAGGTCAACGAGGTATATGGACTGGTGGATGGGATGGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp AGTTTTGTGAGAGTTGTGGCTTGCAAGCTTGCAGTGGAAGAGCTGTaGGTACGCCATGCGGAAGTCTCTGTTGAGGGTGGCGTACAGGAT +
Preference number: 6 (lower is better)
Translates to: SFVRVVACKLAVEEL*VRHAEVSVEGGVQD
Trigger: ATCCTGTACGCCACCCTCAACAGAGACTTCCGCATGGCGTACCAACAGCTCTTCCACTGCAAGCTTGCAAGCCACAACTCTCACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp ATCCCATCCACCAGTCCATATACCTCGTTGACCTGCACTTTGCACTaGAAGGTGTCATTGCCCCCTCTGGTCCCATTTCTGCTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: IPSTSPYTSLTCTLH*KVSLPPLVPFLLFH
Trigger: ATGGAACAGCAGAAATGGGACCAGAGGGGGCAATGACACCTTCAAGTGCAAAGTGCAGGTCAACGAGGTATATGGACTGGTGGATGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp GATGGTGGCTGCCTTCCAGGAGCTGATGTGGTTGATCCTCTTGGCTaGCTCCCTGGCGATCTTAAAGATTCTGTAGTAGGTGACACACAT +
Preference number: 6 (lower is better)
Translates to: DGGCLPGADVVDPLG*LPGDLKDSVVGDTH
Trigger: ATGTGTGTCACCTACTACAGAATCTTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAAGGCAGCCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp GCAGAGAGTTGTTCAACCTCAGGGAAGTTTTGTGAGAGTTGTGGCTaGCAAGCTTGCAGTGGAAGAGCTGTTGGTACGCCATGCGGAAGT +
Preference number: 6 (lower is better)
Translates to: AESCSTSGKFCESCG*QACSGRAVGTPCGS
Trigger: ACTTCCGCATGGCGTACCAACAGCTCTTCCACTGCAAGCTTGCAAGCCACAACTCTCACAAAACTTCCCTGAGGTTGAACAACTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 90 bp AGGAAACGAAGCCTCCACAGGCTCTTGCAGCAGCTTAGGAGGTTATaGGAGCATATGGTGCAAGACAATGCTGTTTTCCTGACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: RKRSLHRLLQQLRRL*EHMVQDNAVFLTGL
Trigger: AAGCCCAGTCAGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCTTCGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2
CDS CAA 72 bp TGCCTTCCAGGAGCTGATGTGGTTGATCCTCTTGGCTaGCTCCCTGGCGATCTTAAAGATTCTGTAGTAGGT +
Preference number: 6 (lower is better)
Translates to: CLPGADVVDPLG*LPGDLKDSVVG
Trigger: ACCTACTACAGAATCTTTAAGATCGCCAGGGAGCAAGCCAAGAGGATCAACCACATCAGCTCCTGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000038101.4
ENSMUST00000209846.2
ENSMUST00000211742.2
CDS CAA 72 bp AGCCTCCACAGGCTCTTGCAGCAGCTTAGGAGGTTATaGGAGCATATGGTGCAAGACAATGCTGTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: SLHRLLQQLRRL*EHMVQDNAVFL
Trigger: CAGGAAAACAGCATTGTCTTGCACCATATGCTCCAATAACCTCCTAAGCTGCTGCAAGAGCCTGTGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209846.2