Pregenerated sensors for HPSE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074852Ensembl transcript IDs: ENSMUST00000099428.5
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGAGCCTCTCTGGGTGAGCAGTCTCATGGGCCACCCTTCCAGATaGTGCTGGGTCCAGCCTGTCTTCAGTCCTCTGCCCTTGCATGCC | + |
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Preference number: 1 (lower is better) Translates to: WEPLWVSSLMGHPSR*CWVQPVFSPLPLHA Trigger: GGCATGCAAGGGCAGAGGACTGAAGACAGGCTGGACCCAGCAGCATCTGGAAGGGTGGCCCATGAGACTGCTCACCCAGAGAGGCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 90 bp | CCTCTCTGGGTGAGCAGTCTCATGGGCCACCCTTCCAGATGCTGCTaGGTCCAGCCTGTCTTCAGTCCTCTGCCCTTGCATGCCCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: PLWVSSLMGHPSRCC*VQPVFSPLPLHALV Trigger: CACTAGGGCATGCAAGGGCAGAGGACTGAAGACAGGCTGGACCCAGCAGCATCTGGAAGGGTGGCCCATGAGACTGCTCACCCAGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 90 bp | GCTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGGGAAGCTCCCTaGGAGCCTCTCTGGGTGAGCAGTCTCATGGGCCACCCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: AMLGFHGRCLRREAP*EPLWVSSLMGHPSR Trigger: TCTGGAAGGGTGGCCCATGAGACTGCTCACCCAGAGAGGCTCCCAGGGAGCTTCCCTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | TTCCTTCTTCCCTCCTTCCCTTCCTCCCTCCCCTCCGACCTCCAGTaGTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGGGAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: FLLPSFPSSLPSDLQ*YAGLPWKVPEKGSS Trigger: GGAGCTTCCCTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAGGGAGGAAGGGAAGGAGGGAAGAAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 90 bp | GCTGTGTGGTCAGGACCGCAGGCAGCTGGTTTGCAAACACTGCTCTaGAAGCTTGCTGTCAGCTGTCCATGCGTAAACAGACACACCAGA | + |
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Preference number: 1 (lower is better) Translates to: AVWSGPQAAGLQTLL*KLAVSCPCVNRHTR Trigger: TCTGGTGTGTCTGTTTACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCCTGACCACACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | GTCAGGACCGCAGGCAGCTGGTTTGCAAACACTGCTCTGGAAGCTTaGTGTCAGCTGTCCATGCGTAAACAGACACACCAGAGGATGTCT | + |
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Preference number: 1 (lower is better) Translates to: VRTAGSWFANTALEA*CQLSMRKQTHQRMS Trigger: AGACATCCTCTGGTGTGTCTGTTTACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | TTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATaGCACTGTCAGAAACCCAGATGCACGCACTCATACATCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: FYLRSTRSQRTSSDG*HCQKPRCTHSYISQ Trigger: CTGGCTGATGTATGAGTGCGTGCATCTGGGTTTCTGACAGTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR TCA 90 bp | ACTGTCATTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTaGTGGATGCCACTGTCAGAAACCCAGATGCACGCACTCATACAT | + |
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Preference number: 1 (lower is better) Translates to: TVILLAKHPFPEDQQ*WMPLSETQMHALIH Trigger: ATGTATGAGTGCGTGCATCTGGGTTTCTGACAGTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | GCTGGTTTGCAAACACTGCTCTGGAAGCTTGCTGTCAGCTGTCCATaGGTAAACAGACACACCAGAGGATGTCTACCTTTTCCTTACGGA | + |
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Preference number: 1 (lower is better) Translates to: AGLQTLLWKLAVSCP*VNRHTRGCLPFPYG Trigger: TCCGTAAGGAAAAGGTAGACATCCTCTGGTGTGTCTGTTTACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | GATCCCCAGAGGAATAGAACTTTAGAGTATGACTGTCATTCTACTTaGGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATGCCACT | + |
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Preference number: 1 (lower is better) Translates to: DPQRNRTLEYDCHST*EAPVPRGPAVMDAT Trigger: AGTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGACAGTCATACTCTAAAGTTCTATTCCTCTGGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | TGTGTGTGTGTGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTaGTTTTTCTTTGTACTACAACTCCCTCCCTCCCAGCAGCATAAA | + |
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Preference number: 1 (lower is better) Translates to: CVCVCSRTLGFDVSV*FFFVLQLPPSQQHK Trigger: TTTATGCTGCTGGGAGGGAGGGAGTTGTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACACACACACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | CTGCCTGCCCAACTCAGAAGCCCTCCACATAGCATTCATCTGTTTTaGTATCAGACCAGTTTCCCATCCTTCCTTAATAGAGCCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: LPAQLRSPPHSIHLF*YQTSFPSFLNRANR Trigger: TCTGTTGGCTCTATTAAGGAAGGATGGGAAACTGGTCTGATAGCAAAACAGATGAATGCTATGTGGAGGGCTTCTGAGTTGGGCAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 90 bp | AACTCCCTCCCTCCCAGCAGCATAAAGAATGATGATTTCTTCTTGTaGAGCCTAATACATTGCTCTCCACTCAGTGAATATTGTTACCTG | + |
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Preference number: 1 (lower is better) Translates to: NSLPPSSIKNDDFFL*SLIHCSPLSEYCYL Trigger: CAGGTAACAATATTCACTGAGTGGAGAGCAATGTATTAGGCTCCACAAGAAGAAATCATCATTCTTTATGCTGCTGGGAGGGAGGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 90 bp | AGCAGCATAAAGAATGATGATTTCTTCTTGTGGAGCCTAATACATTaGTCTCCACTCAGTGAATATTGTTACCTGACCCCCATTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: SSIKNDDFFLWSLIH*SPLSEYCYLTPILS Trigger: GCTCAGAATGGGGGTCAGGTAACAATATTCACTGAGTGGAGAGCAATGTATTAGGCTCCACAAGAAGAAATCATCATTCTTTATGCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCTCCGACCTCCAGTGCTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGGAAGACTTTGCACCATaGGTAAGCACACCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: LPSDLQCYAGLPWKVPEKEDFAP*VSTPTW Trigger: CCAGGTGGGTGTGCTTACGCATGGTGCAAAGTCTTC...CTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | ATCACCTTGCTGTTATCAGCGGCCCTGCAGCTGCCCCCAGACAAGTACTTAGAAGGCCACCCTTCCAGATaGTGCTGGGTCCAGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ITLLLSAALQLPPDKYLEGHPSR*CWVQPV Trigger: GACAGGCTGGACCCAGCAGCATCTGGAAGGGTGGCC...TTCTAAGTACTTGTCTGGGGGCAGCTGCAGGGCCGCTGATAACAGCAAGGTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR CCA 90 bp | GAATCAGATGGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTCCACCTGGGGTAGGGTaGAACTGGTCACCTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: ESDGWLPSTKSPALQAESPPGVG*NWSPSS Trigger: GCTTGAAGGTGACCAGTTCCACCCTACCCCAGGTGG...ACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CAA 90 bp | GGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTCTaGGGCACCTTGCGGTCTAACCTTCCTCTTGTCTCTCACTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GGSPLPNPQLSKLKV*GTLRSNLPLVSHFA Trigger: TGCAAAGTGAGAGACAAGAGGAAGGTTAGACCGCAAGGTGCCCAAGACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR CCA 90 bp | ATCACCTTGCTGTTATCAGCGGCCCTGCAGCTGCCCCCAGACAAGTACTTAGAAAGGACGCTACGTGTGTaGAAGAGCAGAGAGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ITLLLSAALQLPPDKYLERTLRV*KSREQS Trigger: GGACTGCTCTCTGCTCTTCCACACACGTAGCGTCCT...TTCTAAGTACTTGTCTGGGGGCAGCTGCAGGGCCGCTGATAACAGCAAGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR CCA 90 bp | GGCATCTTAGGCACACCTCTGCTGCTCCCCCAGGCCTGTCTATTCACACCAAAAACCCCCATTCTGAGCTaGAGGGAATCTAGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GILGTPLLLPQACLFTPKTPILS*RESRSP Trigger: TGGGGATCTAGATTCCCTCCAGCTCAGAATGGGGGT...TTTTGGTGTGAATAGACAGGCCTGGGGGAGCAGCAGAGGTGTGCCTAAGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCAGACTGTCATTCTACTTaGGAAGCACCCGTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSDCHST*EAPVPR Trigger: TCTGGGAACGGGTGCTTCGCAAGTAGAATGACAGTC...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | ATCACCTTGCTGTTATCAGCGGCCCTGCAGCTGCCCCCAGACAAGTACTTAGAATTTAAGTCCCTCTCCTaGCTGCCCAACTCAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ITLLLSAALQLPPDKYLEFKSLS*LPNSEA Trigger: GGCTTCTGAGTTGGGCAGGCAGGAGAGGGACTTAAA...TTCTAAGTACTTGTCTGGGGGCAGCTGCAGGGCCGCTGATAACAGCAAGGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CAA 90 bp | ACAGTTAGTTACATTGCTGTGTGGTCAGGACCGCAGGCAGCTGGTTaGCAAACACTGCTCTGGAAGCTTGCTGTCAGCTGTCCATGCGTA | + |
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Preference number: 2 (lower is better) Translates to: TVSYIAVWSGPQAAG*QTLLWKLAVSCPCV Trigger: TACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCCTGACCACACAGCAATGTAACTAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | TCATTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATGCCACCTGGTTTGCAAACACTaGTCTGGAAGCTTGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SFYLRSTRSQRTSSDGCHLVCKH*SGSLLS Trigger: TGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAG...GTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CAA 90 bp | CCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTCTTGGGCACCTaGCGGTCTAACCTTCCTCTTGTCTCTCACTTTGCAAACAGGACT | + |
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Preference number: 2 (lower is better) Translates to: PLPNPQLSKLKVLGT*RSNLPLVSHFANRT Trigger: AGTCCTGTTTGCAAAGTGAGAGACAAGAGGAAGGTTAGACCGCAAGGTGCCCAAGACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACCGTCCTCCCACATTCTTCCTaGCTTTGGTCCACCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ILQTNPFHCVMLGSLATVLPHSS*LWSTCL Trigger: CAAACAGGTGGACCAAAGTCAGGAAGAATGTGGGAG...GACGGTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CAA 90 bp | TTCCTGAGGTCAGCCATGTCCACAGAAAGTCCGTGTGACTGCAACTaGCTTCCAAAGACTCCCATACCCTGTTGCCAAATAAAGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FLRSAMSTESPCDCN*LPKTPIPCCQIKVP Trigger: TGGGACCTTTATTTGGCAACAGGGTATGGGAGTCTTTGGAAGCAAGTTGCAGTCACACGGACTTTCTGTGGACATGGCTGACCTCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACCGTCGCTAAAGAAGGTGTCTaGGGAATAAGGACGCTACGT | + |
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Preference number: 2 (lower is better) Translates to: ILQTNPFHCVMLGSLATVAKEGV*GIRTLR Trigger: ACGTAGCGTCCTTATTCCTCAGACACCTTCTTTAGC...GACGGTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | GGCATCTTAGGCACACCTCTGCTGCTCCCCCAGGCCTGTCTATTCACACCAAAAGAAATCCTTTCAGTTTaGGGGCAAGGTCTAAATTGC | + |
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Preference number: 2 (lower is better) Translates to: GILGTPLLLPQACLFTPKEILSV*GQGLNC Trigger: GCAATTTAGACCTTGCCCTCAAACTGAAAGGATTTC...TTTTGGTGTGAATAGACAGGCCTGGGGGAGCAGCAGAGGTGTGCCTAAGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | GATGATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACACCAGCAGTGATGGATaGCACTGTCAGAAACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: DDSSNQPISLCDAGQPSDTSSDG*HCQKPR Trigger: TCTGGGTTTCTGACAGTGGCATCCATCACTGCTGGT...GTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTCCAGAGGACCAGCAGTaGTGGATGCCACTGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LCDAHSVLKISTPKSNPTPEDQQ*WMPLSE Trigger: TTCTGACAGTGGCATCCATCACTGCTGGTCCTCTGG...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGTACTACACTGCTCTGGAAGCTTaGTGTCAGCTGTCCATGCGT | + |
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Preference number: 2 (lower is better) Translates to: CARAHLGLMFPCAFSLYYTALEA*CQLSMR Trigger: ACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGT...GTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | GAATCAGATGGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTGGGCAAGGTCTAAATTaGTTTGTTGGATTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ESDGWLPSTKSPALQAESGQGLN*FVGLVC Trigger: ACACACCAATCCAACAAAGCAATTTAGACCTTGCCC...ACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGTACTACTTGCTCTCCACTCAGTaGATATTGTTACCTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: CARAHLGLMFPCAFSLYYLLSTQ*ILLPDP Trigger: GGGGTCAGGTAACAATATTCACTGAGTGGAGAGCAA...GTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTGCCCCCAGACAAGTACTTAGAAGAGATTCTGATACATGTTCAAGGAAATGTCAGAAACCCAGATaGACGCACTCATACATCAGC | + |
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Preference number: 2 (lower is better) Translates to: AAAPRQVLRRDSDTCSRKCQKPR*THSYIS Trigger: GCTGATGTATGAGTGCGTGCATCTGGGTTTCTGACA...TTTCCTTGAACATGTATCAGAATCTCTTCTAAGTACTTGTCTGGGGGCAGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGAAAGTCCGTGTGACTaGAACTTGCTTCCAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: LCDAHSVLKISTPKSNPTESPCD*NLLPKT Trigger: AGTCTTTGGAAGCAAGTTGCAGTCACACGGACTTTC...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR CCA 90 bp | GATGATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACTCTAAATTGCTTTGTTaGATTGGTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DDSSNQPISLCDAGQPSDSKLLC*IGVCVC Trigger: ACACACACACACACCAATCCAACAAAGCAATTTAGA...GTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTGGGATAACAACAGTAACTTTATTATGCGGCTTCTATATATGTAAAGCATATGCTGGGCTTCCATaGAAGGTGCCTGAGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: VLGITTVTLLCGFYICKAYAGLP*KVPEKG Trigger: TCCCTTCTCAGGCACCTTCCATGGAAGCCCAGCATA...TGCTTTACATATATAGAAGCCGCATAATAAAGTTACTGTTGTTATCCCAAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTACAGAAAATGTGTTTGGGTGGGGCTCTGGAAGTCTTGGCTATACCGAACAGCCTTCTTACTGTTTTaGGTCTTTGAAATCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: IYRKCVWVGLWKSWLYRTAFLLF*VFEILS Trigger: TGAAAGGATTTCAAAGACTCAAAACAGTAAGAAGGC...TGTTCGGTATAGCCAAGACTTCCAGAGCCCCACCCAAACACATTTTCTGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGCCCCCAGACAAGTACTTAGAAGAGATTCTGATACATGTTCAAGGAAAGATGATTTCTTCTTGTaGAGCCTAATACATTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AAAPRQVLRRDSDTCSRKDDFFL*SLIHCS Trigger: AGAGCAATGTATTAGGCTCCACAAGAAGAAATCATC...TTTCCTTGAACATGTATCAGAATCTCTTCTAAGTACTTGTCTGGGGGCAGCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGGGATAACAACAGTAACTTTATTATGCGGCTTCTATATATGTAAAGCAGCGCACACTTGGGTTTaGTGTTTCCGTGTGCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: VLGITTVTLLCGFYICKAAHTWV*CFRVLF Trigger: AAAAAGCACACGGAAACATCAAACCCAAGTGTGCGC...TGCTTTACATATATAGAAGCCGCATAATAAAGTTACTGTTGTTATCCCAAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CAA 90 bp | TACTTGGGAAGAGACAGAAAAGTTCGACTGTCTGCAGTGACTTCATaGATACTTTCTTCTTCTAAATGGTTTTTGGTCAACCAGACAACT | + |
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Preference number: 2 (lower is better) Translates to: YLGRDRKVRLSAVTS*ILSSSKWFLVNQTT Trigger: AGTTGTCTGGTTGACCAAAAACCATTTAGAAGAAGAAAGTATCAATGAAGTCACTGCAGACAGTCGAACTTTTCTGTCTCTTCCCAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 72 bp | CTCCCCTCCGACCTCCAGTGCTATGCTGGGCTTCCATaGAAGGTGCCTGAGAAGGGAAGCTCCCTGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: LPSDLQCYAGLP*KVPEKGSSLGA Trigger: GGCTCCCAGGGAGCTTCCCTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR GCA 72 bp | CCCTCCTTCCCTTCCTCCCTCCCCTCCGACCTCCAGTaGTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PSFPSSLPSDLQ*YAGLPWKVPEK Trigger: CTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAGGGAGGAAGGGAAGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 72 bp | GGCTTCCATGGAAGGTGCCTGAGAAGGGAAGCTCCCTaGGAGCCTCTCTGGGTGAGCAGTCTCATGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GFHGRCLRREAP*EPLWVSSLMGH Trigger: GTGGCCCATGAGACTGCTCACCCAGAGAGGCTCCCAGGGAGCTTCCCTTCTCAGGCACCTTCCATGGAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 72 bp | CAGCAGGCCAGAGCTGACTCACCCATTAGCTCCCTATaGGAAGAGAGGTGTCAGGAAACCCGAGGCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QQARADSPISSL*EERCQETRGSS Trigger: GCTGCTGCCTCGGGTTTCCTGACACCTCTCTTCCCATAGGGAGCTAATGGGTGAGTCAGCTCTGGCCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| 3UTR CCA 72 bp | GTGAGCAGTCTCATGGGCCACCCTTCCAGATGCTGCTaGGTCCAGCCTGTCTTCAGTCCTCTGCCCTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VSSLMGHPSRCC*VQPVFSPLPLH Trigger: ATGCAAGGGCAGAGGACTGAAGACAGGCTGGACCCAGCAGCATCTGGAAGGGTGGCCCATGAGACTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR TCA 72 bp | AAGCAAACTAGCCTGGGGCCTGGCATTAAGGGCCTCTaGTCACCTTGCTGTTATCAGCGGCCCTGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KQTSLGPGIKGL*SPCCYQRPCSC Trigger: GCAGCTGCAGGGCCGCTGATAACAGCAAGGTGATCAGAGGCCCTTAATGCCAGGCCCCAGGCTAGTTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR TCA 72 bp | CTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTaGTGGATGCCACTGTCAGAAACCCAGATGCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLAKHPFPEDQQ*WMPLSETQMHA Trigger: TGCGTGCATCTGGGTTTCTGACAGTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR TCA 72 bp | GTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTaGAAGTCTTGGGCACCTTGCGGTCTAACCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VAPLYQIPSSPS*KSWAPCGLTFL Trigger: GAGGAAGGTTAGACCGCAAGGTGCCCAAGACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | CGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATaGCACTGTCAGAAACCCAGATGCACGCACTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: RSTRSQRTSSDG*HCQKPRCTHSY Trigger: GTATGAGTGCGTGCATCTGGGTTTCTGACAGTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCAAGCTGAAAGTCTTGGGCACCTTGCGGTCTAACCTTCCTCTTGTCTCTCCGCAGGCAGCTGGTTaGCAAACACTGCTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSKLKVLGTLRSNLPLVSPQAAG*QTLLWK Trigger: CTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGG...AGAGACAAGAGGAAGGTTAGACCGCAAGGTGCCCAAGACTTTCAGCTTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR TCA 72 bp | CCCCAGGCCTGTCTATTCACACCAAAACAGTGTCCCTaGCTTATCTGGTACCCAGGAGAGTCAAGGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQACLFTPKQCP*LIWYPGESRVL Trigger: GAGGACCCTTGACTCTCCTGGGTACCAGATAAGTCAGGGACACTGTTTTGGTGTGAATAGACAGGCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | GCAGGCAGCTGGTTTGCAAACACTGCTCTGGAAGCTTaGTGTCAGCTGTCCATGCGTAAACAGACACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: AGSWFANTALEA*CQLSMRKQTHQ Trigger: CTGGTGTGTCTGTTTACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CCA 72 bp | TCAGGACCGCAGGCAGCTGGTTTGCAAACACTGCTCTaGAAGCTTGCTGTCAGCTGTCCATGCGTAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGPQAAGLQTLL*KLAVSCPCVNR Trigger: TCTGTTTACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | GAATCAGATGGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTGGGAGTAGAGGCTGGTaGCTAAAGAAGGTGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ESDGWLPSTKSPALQAESGSRGW*LKKVSE Trigger: CTCAGACACCTTCTTTAGCAACCAGCCTCTACTCCC...ACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCACCTTGCTGTTATCAGCGGCCCTGCAGCTGCCCCCAGACAAGTACTTAGAATTCAGTCCTCTGCCCTaGCATGCCCTAGTGTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: ITLLLSAALQLPPDKYLEFSPLP*HALVYL Trigger: CAGATACACTAGGGCATGCAAGGGCAGAGGACTGAA...TTCTAAGTACTTGTCTGGGGGCAGCTGCAGGGCCGCTGATAACAGCAAGGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CCA 72 bp | ACAGAAGACTTTGCACCATGCGTAAGCACACCCACCTaGGGTAGGGTGGAACTGGTCACCTTCAAGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TEDFAPCVSTPT*GRVELVTFKLS Trigger: AGAAAGCTTGAAGGTGACCAGTTCCACCCTACCCCAGGTGGGTGTGCTTACGCATGGTGCAAAGTCTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CCA 72 bp | TCCAATCCCACTGTCTTCCTTATAGGGAGAATCAGATaGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SNPTVFLIGRIR*VAPLYQIPSSP Trigger: TGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTCTCCCTATAAGGAAGACAGTGGGATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CCA 72 bp | TACAGAAAATGTGTTTGGGTGGGGCTCTGGAAGTCTTaGCTATACCGAACAAGCAGTCCACCAGGTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YRKCVWVGLWKS*LYRTSSPPGEG Trigger: CCCCTCACCTGGTGGACTGCTTGTTCGGTATAGCCAAGACTTCCAGAGCCCCACCCAAACACATTTTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCATTACAGTTAGTTACATaGCTGTGTGGTCAGGACCGC | + |
|
Preference number: 3 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSLQLVT*LCGQDR Trigger: GCGGTCCTGACCACACAGCAATGTAACTAACTGTAA...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACCGTCCCGTGTGACTGCAACTaGCTTCCAAAGACTCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: ILQTNPFHCVMLGSLATVPCDCN*LPKTPI Trigger: TATGGGAGTCTTTGGAAGCAAGTTGCAGTCACACGG...GACGGTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | ACTATGACGGTTAGACTCCCTTTGGAGAGTCTATGTTaGTCCCAGCAGCATGGGAGTAGAGGCTGGTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TMTVRLPLESLC*SQQHGSRGWLL Trigger: TAGCAACCAGCCTCTACTCCCATGCTGCTGGGAGCAACATAGACTCTCCAAAGGGAGTCTAACCGTCATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | GTGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTaGTTTTTCTTTGTACTACAACTCCCTCCCTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VCSRTLGFDVSV*FFFVLQLPPSQ Trigger: CTGGGAGGGAGGGAGTTGTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | GACTGCAACTTGCTTCCAAAGACTCCCATACCCTGTTaGCAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DCNLLPKTPIPC*QIKVPGVGFKS Trigger: GGACTTAAAGCCCACGCCTGGGACCTTTATTTGGCAACAGGGTATGGGAGTCTTTGGAAGCAAGTTGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | GATGATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACACAAGAGGATTAGAGTaGCACCCCCATCTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DDSSNQPISLCDAGQPSDTRGLE*HPHLFL Trigger: GAGGAAGAGATGGGGGTGCAACTCTAATCCTCTTGT...GTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAATCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR TCA 72 bp | GGGCAAGTCGGTGACAGGAAAAGCCGCTGTGCTTGGTaGCTAAGTAGGTTCTGGATGATTCTTCAAACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GQVGDRKSRCAW*LSRFWMILQTN Trigger: GTTGGTTTGAAGAATCATCCAGAACCTACTTAGTCACCAAGCACAGCGGCTTTTCCTGTCACCGACTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CCA 72 bp | GGCAGCCTAGCGACCGTCCCATGCCTCACAAGTGCTTaGGATAACAACAGTAACTTTATTATGCGGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSLATVPCLTSA*DNNSNFIMRLL Trigger: TAGAAGCCGCATAATAAAGTTACTGTTGTTATCCCAAGCACTTGTGAGGCATGGGACGGTCGCTAGGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | ACACCAGAGGATGTCTACCTTTTCCTTACGGACAGATaGCACCTACCTAGACTAAGCTCACACTATGACGGT | + |
|
Preference number: 3 (lower is better) Translates to: TPEDVYLFLTDR*HLPRLSSHYDG Trigger: ACCGTCATAGTGTGAGCTTAGTCTAGGTAGGTGGCATCTGTCCGTAAGGAAAAGGTAGACATCCTCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | CAAACACTGCTCTGGAAGCTTGCTGTCAGCTGTCCATaGGTAAACAGACACACCAGAGGATGTCTACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QTLLWKLAVSCP*VNRHTRGCLPF Trigger: AAAAGGTAGACATCCTCTGGTGTGTCTGTTTACGCATGGACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR TCA 72 bp | TCCTCTGCCCTTGCATGCCCTAGTGTATCTGCTGTGTaGTGCTCATTCTGTACTGAAAATAAGCACCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSALACPSVSAV*CSFCTENKHPK Trigger: TTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAGCAGATACACTAGGGCATGCAAGGGCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | GGTGGAACTGGTCACCTTCAAGCTTTCTCCCTAAAATaGACTAAGACTCGGCTACTTGGGAAGAGACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGTGHLQAFSLK*TKTRLLGKRQK Trigger: TTTCTGTCTCTTCCCAAGTAGCCGAGTCTTAGTGCATTTTAGGGAGAAAGCTTGAAGGTGACCAGTTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGTCTTCCTAAGACTCGGCTACTaGGGAAGAGACAGAAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: DAHSVLKISTPKSNPTVFLRLGY*GRDRKV Trigger: AACTTTTCTGTCTCTTCCCAAGTAGCCGAGTCTTAG...GAAGACAGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | CAACTCAGAAGCCCTCCACATAGCATTCATCTGTTTTaGTATCAGACCAGTTTCCCATCCTTCCTTAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLRSPPHSIHLF*YQTSFPSFLNR Trigger: TCTATTAAGGAAGGATGGGAAACTGGTCTGATAGCAAAACAGATGAATGCTATGTGGAGGGCTTCTGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR-3UTR CAA 90 bp | CGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGTACTACAACTCCAATGATGATTTCTTCTaGTGGAGCCTAATACATTGC | + |
|
Preference number: 3 (lower is better) Translates to: RAHLGLMFPCAFSLYYNSNDDFF*WSLIHC Trigger: GCAATGTATTAGGCTCCACAAGAAGAAATCATCATT...GGAGTTGTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR GCA 72 bp | AAGAATGATGATTTCTTCTTGTGGAGCCTAATACATTaGTCTCCACTCAGTGAATATTGTTACCTGACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KNDDFFLWSLIH*SPLSEYCYLTP Trigger: GGGGGTCAGGTAACAATATTCACTGAGTGGAGAGCAATGTATTAGGCTCCACAAGAAGAAATCATCATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CCA 72 bp | CCTCCCAGCAGCATAAAGAATGATGATTTCTTCTTGTaGAGCCTAATACATTGCTCTCCACTCAGTGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: PPSSIKNDDFFL*SLIHCSPLSEY Trigger: ATATTCACTGAGTGGAGAGCAATGTATTAGGCTCCACAAGAAGAAATCATCATTCTTTATGCTGCTGGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTCCGACCTCCAGTGCTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGTGCCTCCAGCTGAGGTaGTCACCACGCCTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSDLQCYAGLPWKVPEKCLQLR*SPRLPA Trigger: GGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCA...CTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCATCGGATGACTCTTCCTaGCCGAGGCTTCCGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSSDDSS*PRLPLE Trigger: CTCCAGCGGAAGCCTCGGCCAGGAAGAGTCATCCGA...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTCTTGGGCACCTTGCGCCGACAGATTGTTTGTaGCTCCAGCTGAGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSTKSPALQAESLGHLAPTDCL*LQLRWS Trigger: TGACCACCTCAGCTGGAGGCACAAACAATCTGTCGG...CGCAAGGTGCCCAAGACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCAAGCTGCTGGAGGCCATaGCTTCAGGGAAAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSSCWRP*LQGKHR Trigger: TCTGTGCTTTCCCTGAAGCCATGGCCTCCAGCAGCT...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTCCGACCTCCAGTGCTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGATTGACTGTCCTGACTaGGTTCTTGGTGCTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSDLQCYAGLPWKVPEKIDCPD*VLGAHI Trigger: GATGTGAGCACCAAGAACCCAGTCAGGACAGTCAAT...CTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCTGAGGAATAAGGACGCTACGTGTGTGGAAGAGCAGAGAGCAGTCCAGTCGAGCCAGCCATCATaGATGATGGAGGGATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCLRNKDATCVEEQRAVQSSQPS*MMEGSS Trigger: GCTGGATCCCTCCATCATTCATGATGGCTGGCTCGA...CTGGACTGCTCTCTGCTCTTCCACACACGTAGCGTCCTTATTCCTCAGACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCTGAGGAATAAGGACGCTACGTGTGTGGAAGAGCAGAGAGCAGTCCAGGGAAATCCGTCCTTTTaGCCCCGAAGCGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCLRNKDATCVEEQRAVQGNPSF*PRSAER Trigger: CCTTTCTGCGCTTCGGGGGCAAAAGGACGGATTTCC...CTGGACTGCTCTCTGCTCTTCCACACACGTAGCGTCCTTATTCCTCAGACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | ATAGGGAGAATCAGATGGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCCAGATGCATCTGCGATaGCTTCTCTCTCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGRIRWVAPLYQIPSSPSQMHLR*LLSLEL Trigger: GAGCTCCAGAGAGAGAAGGCATCGCAGATGCATCTG...GCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTCTCCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAAACAGACAAAGGAGGAGTTACAAGAGGATTAGAGTTGCACCCCCATGCGGGGCTTCAGTTCTaGAAGGGTCCCGTCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQETDKGGVTRGLELHPHAGLQF*KGPVVH Trigger: GTGGACGACGGGACCCTTCCAGAACTGAAGCCCCGC...ATGGGGGTGCAACTCTAATCCTCTTGTAACTCCTCCTTTGTCTGTTTCCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CAA 72 bp | TACATTGCTGTGTGGTCAGGACCGCAGGCAGCTGGTTaGCAAACACTGCTCTGGAAGCTTGCTGTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YIAVWSGPQAAG*QTLLWKLAVSC Trigger: ACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCCTGACCACACAGCAATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACCGTCCTAAGGGCTGGCCATTaGGCTGCACTGACTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ILQTNPFHCVMLGSLATVLRAGH*AALTWT Trigger: AGTCCAAGTCAGTGCAGCTCAATGGCCAGCCCTTAG...GACGGTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | GATGATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACTGGAGCCCAGCTACATaGACTGCCAGGACTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DDSSNQPISLCDAGQPSDWSPAT*TARTLG Trigger: CCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCA...GTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGGACGCTACGTGTGTGGAAGAGCAGAGAGCAGTCCAGCAGGCCCACCAGTATGACATCAGGGTGCTaGGCAATCTTACAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRTLRVWKSREQSSRPTSMTSGC*AILQPF Trigger: GAAAGGCTGTAAGATTGCCCAGCACCCTGATGTCAT...ACTGGTGGGCCTGCTGGACTGCTCTCTGCTCTTCCACACACGTAGCGTCCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTCCGACCTCCAGTGCTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGCCAAATCTTCTTTCCTaGAGTGTATGTGTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSDLQCYAGLPWKVPEKPNLLS*SVCVDH Trigger: GTGGTCAACACATACACTCCAGGAAAGAAGATTTGG...CTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCAGCTGTCCATGCGTAAACAGACACACCAGAGGATGTCTACCTTTTCCGGCTGCAGCAGATACTaGTGCACGAGCTTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCQLSMRKQTHQRMSTFSGCSRY*CTSLSL Trigger: GAGGGACAAGCTCGTGCACCAGTATCTGCTGCAGCC...GGAAAAGGTAGACATCCTCTGGTGTGTCTGTTTACGCATGGACAGCTGACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CAA 72 bp | CCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTCTaGGGCACCTTGCGGTCTAACCTTCCTCTTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPNPQLSKLKV*GTLRSNLPLVS Trigger: AGAGACAAGAGGAAGGTTAGACCGCAAGGTGCCCAAGACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGTACTACGTTTGTGCCTCCAGCTaGGGTGGTCACCACGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CARAHLGLMFPCAFSLYYVCASS*GGHHAF Trigger: GAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAAC...GTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACCGTCTGCAGCAGATACTGGTaGACGAGCTTGTCCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILQTNPFHCVMLGSLATVCSRYW*TSLSLR Trigger: TCTGAGGGACAAGCTCGTGCACCAGTATCTGCTGCA...GACGGTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | TCATTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATGCCACTTCTGGTCCACCAGATaGTTGTATCCGTGGTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFYLRSTRSQRTSSDGCHFWSTR*LYPWSK Trigger: TTTCGACCACGGATACAACCATCTGGTGGACCAGAA...GTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | CTCAGTGAATATTGTTACCTGACCCCCATTCTGAGCTGGAGGGAATCTAGATCCGCCAGCCATCATGAATaGTGGAGGGATCCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSEYCYLTPILSWRESRSASHHE*WRDPAA Trigger: TGCAGCTGGATCCCTCCATCATTCATGATGGCTGGC...GGATCTAGATTCCCTCCAGCTCAGAATGGGGGTCAGGTAACAATATTCACTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCAACGACATCAATGCCCTaGTTGGCCAACATTCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSTTSMP*LANIPK Trigger: TTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGT...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | GCTCCCCCAGGCCTGTCTATTCACACCAAAACAGTGTCCCTGACTTATCTGGTAATGGAGGGATCCAGCTaGAGAGAGAGGAAGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: APPGLSIHTKTVSLTYLVMEGSS*RERKFS Trigger: TGAGAACTTCCTCTCTCTGCAGCTGGATCCCTCCAT...TACCAGATAAGTCAGGGACACTGTTTTGGTGTGAATAGACAGGCCTGGGGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGCCCAGCTACATGCACTaGCAGGACTTTGGGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCARAHLGLMFPCAFSLPSYMH*QDFGAN Trigger: ATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGG...CAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACACACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | GAATCAGATGGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCTGAAAGTGGATTTCTCAGGTTCTaGAACTGCAGGAAATCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESDGWLPSTKSPALQAESGFLRF*NCRKSV Trigger: GACGGATTTCCTGCAGTTCCAGAACCTGAGAAATCC...ACTTTCAGCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCAAGAGCAAATATCAGGTaGAGTCCAGAGCAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSRANIR*SPEQSA Trigger: TGCTGATTGCTCTGGACTCCACCTGATATTTGCTCT...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | TCATTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATGCCACGCTCCGATAGTTATTTaGCTCATTACCCAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYLRSTRSQRTSSDGCHAPIVI*LITQFP Trigger: TGGGAACTGGGTAATGAGCCAAATAACTATCGGAGC...GTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | GCTCCCCCAGGCCTGTCTATTCACACCAAAACAGTGTCCCTGACTTATCTGGTACATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: APPGLSIHTKTVSLTYLVHPHSF*DSNPGP Trigger: CGGGCCCGGATTACTATCTCAAAAACTATGAGGATG...TACCAGATAAGTCAGGGACACTGTTTTGGTGTGAATAGACAGGCCTGGGGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | GGCATCTTAGGCACACCTCTGCTGCTCCCCCAGGCCTGTCTATTCACACCAAAACTGGAGTGTATGTGTTaGCCACTTTCTGAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GILGTPLLLPQACLFTPKLECMC*PLSEFS Trigger: GGAAAATTCAGAAAGTGGTCAACACATACACTCCAG...TTTTGGTGTGAATAGACAGGCCTGGGGGAGCAGCAGAGGTGTGCCTAAGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | CAAATAAAGGTCCCAGGCGTGGGCTTTAAGTCCCTCTCCTGCCTGCCCAACTCAGAGTCCCAGCCAGTTTaGTTTTCTTTCTTGATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QIKVPGVGFKSLSCLPNSESQPV*FSFLID Trigger: ATCGATCAAGAAAGAAAATCAAACTGGCTGGGACTC...TGAGTTGGGCAGGCAGGAGAGGGACTTAAAGCCCACGCCTGGGACCTTTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | ATCACCTTGCTGTTATCAGCGGCCCTGCAGCTGCCCCCAGACAAGTACTTAGAATGTTCCAGGAGTTATTaGGATTACGACGCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITLLLSAALQLPPDKYLECSRSY*DYDAVH Trigger: ATGCACTGCGTCGTAATCCCAATAACTCCTGGAACA...TTCTAAGTACTTGTCTGGGGGCAGCTGCAGGGCCGCTGATAACAGCAAGGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAAACAGACAAAGGAGGAGTTACAAGAGGATTAGAGTTGCACCCCCATACCATCACTAAGGGCTaGCCATTGAGCTGCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QQETDKGGVTRGLELHPHTITKG*PLSCTD Trigger: GTCAGTGCAGCTCAATGGCCAGCCCTTAGTGATGGT...ATGGGGGTGCAACTCTAATCCTCTTGTAACTCCTCCTTTGTCTGTTTCCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAAACAGACAAAGGAGGAGTTACAAGAGGATTAGAGTTGCACCCCCATAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQETDKGGVTRGLELHPHKAHGD*RDDQCP Trigger: CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT...ATGGGGGTGCAACTCTAATCCTCTTGTAACTCCTCCTTTGTCTGTTTCCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LCDAHSVLKISTPKSNPTGSPSP*PPGHQC Trigger: ACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCC...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACCGTCTCCGTGGTCGAAAAATaGATGTCGTATCACGACATC | + |
|
Preference number: 4 (lower is better) Translates to: ILQTNPFHCVMLGSLATVSVVEK*MSYHDI Trigger: GATGTCGTGATACGACATTCATTTTTCGACCACGGA...GACGGTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | ATCACCTTGCTGTTATCAGCGGCCCTGCAGCTGCCCCCAGACAAGTACTTAGAAATCTTACAGCCTTTCTaGTTGTCCAAGGCAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLLLSAALQLPPDKYLEILQPF*LSKATS Trigger: TGATGTTGCCTTGGACAAGCAGAAAGGCTGTAAGAT...TTCTAAGTACTTGTCTGGGGGCAGCTGCAGGGCCGCTGATAACAGCAAGGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | GATGATTCTTCAAACCAACCCATTTCACTGTGTGATGCTGGGCAGCCTAGCGACATCCACTGTGCTTCCTaGCACCTTCATGAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DDSSNQPISLCDAGQPSDIHCAS*HLHESI Trigger: GATGGATTCATGAAGGTGGCAGGAAGCACAGTGGAT...GTCGCTAGGCTGCCCAGCATCACACAGTGAAATGGGTTGGTTTGAAGAATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | GGACCGCAGGCAGCTGGTTTGCAAACACTGCTCTGGAAGCTTGCTGTCAGCTGTAATGGGTTAAAATTCTaGTCCACCAGATGGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GPQAAGLQTLLWKLAVSCNGLKF*STRWLY Trigger: ATACAACCATCTGGTGGACCAGAATTTTAACCCATT...ACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CAA 72 bp | TCAGCCATGTCCACAGAAAGTCCGTGTGACTGCAACTaGCTTCCAAAGACTCCCATACCCTGTTGCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SAMSTESPCDCN*LPKTPIPCCQI Trigger: TATTTGGCAACAGGGTATGGGAGTCTTTGGAAGCAAGTTGCAGTCACACGGACTTTCTGTGGACATGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CAA 72 bp | GCACCTTGCGGTCTAACCTTCCTCTTGTCTCTCACTTaGCAAACAGGACTAAGCCCTTATTCTTCAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: APCGLTFLLSLT*QTGLSPYSSGI Trigger: GATGCCTGAAGAATAAGGGCTTAGTCCTGTTTGCAAAGTGAGAGACAAGAGGAAGGTTAGACCGCAAGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGGACGCTACGTGTGTGGAAGAGCAGAGAGCAGTCCAGCAGGCCCACCAGTAAATGTTGTACTTTTTaGTGGCACTGTACTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: IRTLRVWKSREQSSRPTSKCCTF*WHCTST Trigger: TGTTGAAGTACAGTGCCAGCAAAAAGTACAACATTT...ACTGGTGGGCCTGCTGGACTGCTCTCTGCTCTTCCACACACGTAGCGTCCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTCTGCCCGGCCATGGATaGTCCGATAGTTATTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCDAHSVLKISTPKSNPTLPGHG*SDSYLA Trigger: AGCCAAATAACTATCGGAGCATCCATGGCCGGGCAG...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | GCTCCCCCAGGCCTGTCTATTCACACCAAAACAGTGTCCCTGACTTATCTGGTAGGTTGTGGTGGTTTGTaGAGTGAGCATAGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: APPGLSIHTKTVSLTYLVGCGGL*SEHRFL Trigger: TAAGAATCTATGCTCACTGCACAAACCACCACAACC...TACCAGATAAGTCAGGGACACTGTTTTGGTGTGAATAGACAGGCCTGGGGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | ATTTACAGAAAATGTGTTTGGGTGGGGCTCTGGAAGTCTTGGCTATACCGAACATGGAGTAAACCCGGATaGGTTGGAGCAGGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYRKCVWVGLWKSWLYRTWSKPG*VGAGSS Trigger: TGAAGAGCCTGCTCCAACCCATCCGGGTTTACTCCA...TGTTCGGTATAGCCAAGACTTCCAGAGCCCCACCCAAACACATTTTCTGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGCTCGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGGTATCACGACATCAATaGCCTGATTGGCCAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCARAHLGLMFPCAFSLVSRHQ*PDWPTF Trigger: GAATGTTGGCCAATCAGGGCATTGATGTCGTGATAC...CAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | GATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGTCTTCAGGTCACCAGACGCTTaGAGCTTAAGAAATCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DAHSVLKISTPKSNPTVFRSPDA*SLRNRA Trigger: GGCTCGATTTCTTAAGCTCCAAGCGTCTGGTGACCT...GAAGACAGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGCTCGCGCACACTTGGGTTaGATGTTTCCGTGTGCTTTTTCTTTGTACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCARAHLG*MFPCAFSLYYN Trigger: GTTGTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCGAGCACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGAATATTGTTACCTGACCCCCATTCTGAGCTGGAGGGAATCTAGATCCTGTTGTACTTTTTGCTaGCACTGTACTTCAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSEYCYLTPILSWRESRSCCTFC*HCTSTG Trigger: GCCTGTTGAAGTACAGTGCCAGCAAAAAGTACAACA...GGATCTAGATTCCCTCCAGCTCAGAATGGGGGTCAGGTAACAATATTCACTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTTTCAGAAGAACCAGATaGATCTGCGATGCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCDAHSVLKISTPKSNPTFRRTR*ICDAFS Trigger: AGAGAAGGCATCGCAGATGCATCTGGTTCTTCTGAA...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGCCCCCAGACAAGTACTTAGAAGAGATTCTGATACATGTTCAAGGAAAACCTGGCTGTTAATATaGGGTTACTGTAAGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAPRQVLRRDSDTCSRKTWLLI*GYCKYW Trigger: CCAATACTTACAGTAACCTCATATTAACAGCCAGGT...TTTCCTTGAACATGTATCAGAATCTCTTCTAAGTACTTGTCTGGGGGCAGCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | CGTTCTTCCTGGGCCGTCCGATGTTGGGGCCGTACAGGCTGGCTCTaGAGTAAACCCGGATGGGTTGGAGCAGGCTCTTCAGCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RSSWAVRCWGRTGWL*SKPGWVGAGSSAGC Trigger: ACATCCAGCTGAAGAGCCTGCTCCAACCCATCCGGGTTTACTCCAGAGCCAGCCTGTACGGCCCCAACATCGGACGGCCCAGGAAGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | GGCCAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCGGCCGGCCCGCAGCGGGCGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQSIDILDHIKAHGD*RDDQCPAGPQRAGL Trigger: AAGCCCCGCCCGCTGCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CTCCCCTCCGACCTCCAGTGCTATGCTGGGCTTCCATGGAAGGTGCCTGAGAAGACTAAGGGCTGGCCATaGAGCTGCACTGACTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSDLQCYAGLPWKVPEKTKGWP*SCTDLD Trigger: GTCCAAGTCAGTGCAGCTCAATGGCCAGCCCTTAGT...CTTCTCAGGCACCTTCCATGGAAGCCCAGCATAGCACTGGAGGTCGGAGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 90 bp | GACTCTTCCTGGCCGAGGCTTCCGCTGGAGCCCAGCTACATGCACTaGCAGGACTTTGGGGCCAATCAGACGCTTGTAAAGCAGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSSWPRLPLEPSYMH*QDFGANQTLVKQRK Trigger: CTTTCTCTGCTTTACAAGCGTCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGAAGCCTCGGCCAGGAAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | GTCCGATGTTGGGGCCGTACAGGCTGGCTCTGGAGTAAACCCGGATaGGTTGGAGCAGGCTCTTCAGCTGGATGTAATCCTTTCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VRCWGRTGWLWSKPG*VGAGSSAGCNPFPT Trigger: AGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGCTCCAACCCATCCGGGTTTACTCCAGAGCCAGCCTGTACGGCCCCAACATCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | GCCGAGGCTTCCGCTGGAGCCCAGCTACATGCACTGCCAGGACTTTaGGGCCAATCAGACGCTTGTAAAGCAGAGAAAGCCAATAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AEASAGAQLHALPGL*GQSDACKAEKANSL Trigger: CAGACTATTGGCTTTCTCTGCTTTACAAGCGTCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGAAGCCTCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GGACCGCAGGCAGCTGGTTTGCAAACACTGCTCTGGAAGCTTGCTGTCAGCTGTAGGAAATCCGTCCTTTaGCCCCCGAAGCGCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPQAAGLQTLLWKLAVSCRKSVL*PPKRRK Trigger: CTTTCTGCGCTTCGGGGGCAAAAGGACGGATTTCCT...ACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGGAGAATCAGATGGGTGGCTCCCCTCTACCAAATCCCCAGCTCTCCAAGCGTAAACCCGGATGGGTaGGAGCAGGCTCTTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGRIRWVAPLYQIPSSPSVNPDG*EQALQL Trigger: CAGCTGAAGAGCCTGCTCCAACCCATCCGGGTTTAC...GCTTGGAGAGCTGGGGATTTGGTAGAGGGGAGCCACCCATCTGATTCTCCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | ATTCTTAGTTTGTCTCGGATGACTCTTCCTGGCCGAGGCTTCCGCTaGAGCCCAGCTACATGCACTGCCAGGACTTTGGGGCCAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ILSLSRMTLPGRGFR*SPATCTARTLGPIR Trigger: TCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGAAGCCTCGGCCAGGAAGAGTCATCCGAGACAAACTAAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CTCTCCAAGCTGAAAGTCTTGGGCACCTTGCGGTCTAACCTTCCTCTTGTCTCTTACTGGTGCACGAGCTaGTCCCTCAGAGTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSKLKVLGTLRSNLPLVSYWCTS*SLRVPA Trigger: GGCTGGGACTCTGAGGGACAAGCTCGTGCACCAGTA...AGAGACAAGAGGAAGGTTAGACCGCAAGGTGCCCAAGACTTTCAGCTTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GGACCGCAGGCAGCTGGTTTGCAAACACTGCTCTGGAAGCTTGCTGTCAGCTGTGAGAGGAAGTTCTCATaGACTGTCCTGACTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPQAAGLQTLLWKLAVSCERKFS*TVLTGF Trigger: GAACCCAGTCAGGACAGTCAATGAGAACTTCCTCTC...ACAGCTGACAGCAAGCTTCCAGAGCAGTGTTTGCAAACCAGCTGCCTGCGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GGCATCTTAGGCACACCTCTGCTGCTCCCCCAGGCCTGTCTATTCACACCAAAAAATCCGACAGATTGTTaGTGCCTCCAGCTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GILGTPLLLPQACLFTPKNPTDC*CLQLRW Trigger: CCACCTCAGCTGGAGGCACAAACAATCTGTCGGATT...TTTTGGTGTGAATAGACAGGCCTGGGGGAGCAGCAGAGGTGTGCCTAAGATGCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 90 bp | GAATCCTGCAGCGTAGGAATCCGACAGATTGTTTGTGCCTCCAGCTaGGGTGGTCACCACGCCTTCCAGCCAAATCTTCTTTCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESCSVGIRQIVCASS*GGHHAFQPNLLSWS Trigger: ACTCCAGGAAAGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCTACGCTGCAGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 90 bp | TGTGGTGGTTTGTGCAGTGAGCATAGATTCTTAGTTTGTCTCGGATaGCTCTTCCTGGCCGAGGCTTCCGCTGGAGCCCAGCTACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGGLCSEHRFLVCLG*LFLAEASAGAQLHA Trigger: TGCATGTAGCTGGGCTCCAGCGGAAGCCTCGGCCAGGAAGAGTCATCCGAGACAAACTAAGAATCTATGCTCACTGCACAAACCACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | CTGCAGCGTAGGAATCCGACAGATTGTTTGTGCCTCCAGCTGAGGTaGTCACCACGCCTTCCAGCCAAATCTTCTTTCCTGGAGTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: LQRRNPTDCLCLQLR*SPRLPAKSSFLECM Trigger: CATACACTCCAGGAAAGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCTACGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | TCATTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATGCCACCTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFYLRSTRSQRTSSDGCHLFQEL*GLRRSA Trigger: TGCACTGCGTCGTAATCCCAATAACTCCTGGAACAG...GTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | TCATTCTACTTGCGAAGCACCCGTTCCCAGAGGACCAGCAGTGATGGATGCCACTTACAGCCTTTCTGCTaGTCCAAGGCAACATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SFYLRSTRSQRTSSDGCHLQPFC*SKATSL Trigger: GAGTGATGTTGCCTTGGACAAGCAGAAAGGCTGTAA...GTGGCATCCATCACTGCTGGTCCTCTGGGAACGGGTGCTTCGCAAGTAGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 90 bp | TTAGCCATAAGAATCCTGCAGCGTAGGAATCCGACAGATTGTTTGTaGCTCCAGCTGAGGTGGTCACCACGCCTTCCAGCCAAATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAIRILQRRNPTDCL*LQLRWSPRLPAKSS Trigger: AGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCTACGCTGCAGGATTCTTATGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 90 bp | AAGGTCACCAGACGCTTGGAGCTTAAGAAATCGAGCCAGCCATCATaGATGATGGAGGGATCCAGCTGCAGAGAGAGGAAGTTCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KVTRRLELKKSSQPS*MMEGSSCRERKFSL Trigger: CAATGAGAACTTCCTCTCTCTGCAGCTGGATCCCTCCATCATTCATGATGGCTGGCTCGATTTCTTAAGCTCCAAGCGTCTGGTGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 90 bp | GCTCTTCAGCTGGATGTAATCCTTTCCCAACTGGCTACCATTTACTaGCCGGCCATGGATGCTCCGATAGTTATTTGGCTCATTACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALQLDVILSQLATIY*PAMDAPIVIWLITQ Trigger: CTGGGTAATGAGCCAAATAACTATCGGAGCATCCATGGCCGGGCAGTAAATGGTAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTAGGAAGTCCATCACCTaGACCACCCGGCCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LCDAHSVLKISTPKSNPTRKSIT*TTRPSM Trigger: CATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCT...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGTCTTCTTGAGCTGCACTGACTaGGACTTTAGGCCTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DAHSVLKISTPKSNPTVFLSCTD*DFRPSC Trigger: GCAGGAAGGCCTAAAGTCCAAGTCAGTGCAGCTCAA...GAAGACAGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 90 bp | TGTAATCCTTTCCCAACTGGCTACCATTTACTGCCCGGCCATGGATaGTCCGATAGTTATTTGGCTCATTACCCAGTTCCCAAGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: CNPFPTGYHLLPGHG*SDSYLAHYPVPKKC Trigger: ACATTTCTTGGGAACTGGGTAATGAGCCAAATAACTATCGGAGCATCCATGGCCGGGCAGTAAATGGTAGCCAGTTGGGAAAGGATTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LCDAHSVLKISTPKSNPTVLTGF*VLTSSR Trigger: TCTACTTGATGTGAGCACCAAGAACCCAGTCAGGAC...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTTGCTCCGATAGTTATTaGGCTCATTACCCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCDAHSVLKISTPKSNPTCSDSY*AHYPVP Trigger: GGGAACTGGGTAATGAGCCAAATAACTATCGGAGCA...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCCCCAGACAAGTACTTAGAAGAGATTCTGATACATGTTCAAGGAAAATCAATGTAGCAATGTaGCCAGGTAACCGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAAPRQVLRRDSDTCSRKINVAM*PGNRIH Trigger: GTGGATGCGGTTACCTGGCAACATTGCTACATTGAT...TTTCCTTGAACATGTATCAGAATCTCTTCTAAGTACTTGTCTGGGGGCAGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCCCCAGACAAGTACTTAGAAGAGATTCTGATACATGTTCAAGGAAATGTGGTTGTGGTGGTTaGTGCAGTGAGCATAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: AAAPRQVLRRDSDTCSRKCGCGG*CSEHRF Trigger: GAATCTATGCTCACTGCACAAACCACCACAACCACA...TTTCCTTGAACATGTATCAGAATCTCTTCTAAGTACTTGTCTGGGGGCAGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 90 bp | GTTAAAATTCTGGTCCACCAGATGGTTGTATCCGTGGTCGAAAAATaGATGTCGTATCACGACATCAATGCCCTGATTGGCCAACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKILVHQMVVSVVEK*MSYHDINALIGQHS Trigger: GGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGACCACGGATACAACCATCTGGTGGACCAGAATTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 90 bp | CGTGGTCGAAAAATGAATGTCGTATCACGACATCAATGCCCTGATTaGCCAACATTCCTAAAGTGTTTAGCCATAAGAATCCTGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RGRKMNVVSRHQCPD*PTFLKCLAIRILQR Trigger: ACGCTGCAGGATTCTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGACCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CGCGCACACTTGGGTTTGATGTTTCCGTGTGCTTTTTCTTTGTACTACAACTCCAGAGTCCCAGCCAGTTaGATTTTCTTTCTTGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: RAHLGLMFPCAFSLYYNSRVPAS*IFFLDR Trigger: TCGATCAAGAAAGAAAATCAAACTGGCTGGGACTCT...GGAGTTGTAGTACAAAGAAAAAGCACACGGAAACATCAAACCCAAGTGTGCGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGCCCCCAGACAAGTACTTAGAAGAGATTCTGATACATGTTCAAGGAAAGTAAGTATTGGAGTATaGCTCCTTCAGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAPRQVLRRDSDTCSRKVSIGV*LLQKNQ Trigger: CTGGTTCTTCTGAAGGAGCAATACTCCAATACTTAC...TTTCCTTGAACATGTATCAGAATCTCTTCTAAGTACTTGTCTGGGGGCAGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 90 bp | TATCCGTGGTCGAAAAATGAATGTCGTATCACGACATCAATGCCCTaGTTGGCCAACATTCCTAAAGTGTTTAGCCATAAGAATCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YPWSKNECRITTSMP*LANIPKVFSHKNPA Trigger: TGCAGGATTCTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGACCACGGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 90 bp | GGTTGTATCCGTGGTCGAAAAATGAATGTCGTATCACGACATCAATaGCCTGATTGGCCAACATTCCTAAAGTGTTTAGCCATAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: GCIRGRKMNVVSRHQ*PDWPTFLKCLAIRI Trigger: GATTCTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGACCACGGATACAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGATGCTCATTCTGTACTGAAAATAAGCACCCCAAAGTCCAATCCCACTGAAATGTTGTACTTTTaGCTGGCACTGTACTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCDAHSVLKISTPKSNPTEMLYF*LALYFN Trigger: GTTGAAGTACAGTGCCAGCAAAAAGTACAACATTTC...AGTGGGATTGGACTTTGGGGTGCTTATTTTCAGTACAGAATGAGCATCACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 72 bp | CTTCCTGGCCGAGGCTTCCGCTGGAGCCCAGCTACATaGACTGCCAGGACTTTGGGGCCAATCAGACGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPGRGFRWSPAT*TARTLGPIRRL Trigger: CAAGCGTCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGAAGCCTCGGCCAGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 72 bp | TGGGCCGTCCGATGTTGGGGCCGTACAGGCTGGCTCTaGAGTAAACCCGGATGGGTTGGAGCAGGCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WAVRCWGRTGWL*SKPGWVGAGSS Trigger: TGAAGAGCCTGCTCCAACCCATCCGGGTTTACTCCAGAGCCAGCCTGTACGGCCCCAACATCGGACGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 72 bp | TTCTCAGGTTCTGGAACTGCAGGAAATCCGTCCTTTTaGCCCCGAAGCGCAGAAAGGCGGGCGAGAGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSGSGTAGNPSF*PRSAERRARVP Trigger: GGGGACTCTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACGGATTTCCTGCAGTTCCAGAACCTGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 72 bp | TGGCCGAGGCTTCCGCTGGAGCCCAGCTACATGCACTaGCAGGACTTTGGGGCCAATCAGACGCTTGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WPRLPLEPSYMH*QDFGANQTLVK Trigger: CTTTACAAGCGTCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGAAGCCTCGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | TTTCTCAGGTTCTGGAACTGCAGGAAATCCGTCCTTTaGCCCCCGAAGCGCAGAAAGGCGGGCGAGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLRFWNCRKSVL*PPKRRKAGESP Trigger: GGGACTCTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACGGATTTCCTGCAGTTCCAGAACCTGAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 90 bp | GATGTTGGGGCCGTACAGGCTGGCTCTGGAGTAAACCCGGATGGGTaGGAGCAGGCTCTTCAGCTGGATGTAATCCTTTCCCAACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DVGAVQAGSGVNPDG*EQALQLDVILSQLA Trigger: AGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGCTCCAACCCATCCGGGTTTACTCCAGAGCCAGCCTGTACGGCCCCAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 72 bp | TCCGCTGGAGCCCAGCTACATGCACTGCCAGGACTTTaGGGCCAATCAGACGCTTGTAAAGCAGAGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAGAQLHALPGL*GQSDACKAEKA Trigger: GGCTTTCTCTGCTTTACAAGCGTCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 72 bp | TCTGGAAGGGTCCCGTCGTCCACCATCACTAAGGGCTaGCCATTGAGCTGCACTGACTTGGACTTTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGRVPSSTITKG*PLSCTDLDFRP Trigger: AGGCCTAAAGTCCAAGTCAGTGCAGCTCAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 72 bp | ATTGACATTCTTGACCACATAAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCGGCCGGCCCGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: IDILDHIKAHGD*RDDQCPAGPQR Trigger: CCGCTGCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | CAACATCACTCCGGACAATGTCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCGGGCCCCCGCGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QHHSGQCHPHSF*DSNPGPGPRGF Trigger: AAAGCCGCGGGGGCCCGGGCCCGGATTACTATCTCAAAAACTATGAGGATGACATTGTCCGGAGTGATGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | TTGTGCAGTGAGCATAGATTCTTAGTTTGTCTCGGATaGCTCTTCCTGGCCGAGGCTTCCGCTGGAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCSEHRFLVCLG*LFLAEASAGAQ Trigger: CTGGGCTCCAGCGGAAGCCTCGGCCAGGAAGAGTCATCCGAGACAAACTAAGAATCTATGCTCACTGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | AGCGTAGGAATCCGACAGATTGTTTGTGCCTCCAGCTaGGGTGGTCACCACGCCTTCCAGCCAAATCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVGIRQIVCASS*GGHHAFQPNLL Trigger: AAGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCTACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 72 bp | AGGAATCCGACAGATTGTTTGTGCCTCCAGCTGAGGTaGTCACCACGCCTTCCAGCCAAATCTTCTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RNPTDCLCLQLR*SPRLPAKSSFL Trigger: CAGGAAAGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | ATAAGAATCCTGCAGCGTAGGAATCCGACAGATTGTTaGTGCCTCCAGCTGAGGTGGTCACCACGCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IRILQRRNPTDC*CLQLRWSPRLP Trigger: TGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCTACGCTGCAGGATTCTTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 90 bp | TGTTTAGCCATAAGAATCCTGCAGCGTAGGAATCCGACAGATTGTTaGTGCCTCCAGCTGAGGTGGTCACCACGCCTTCCAGCCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: CLAIRILQRRNPTDC*CLQLRWSPRLPAKS Trigger: AGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGATTCCTACGCTGCAGGATTCTTATGGCTAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | AGACGCTTGGAGCTTAAGAAATCGAGCCAGCCATCATaGATGATGGAGGGATCCAGCTGCAGAGAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRLELKKSSQPS*MMEGSSCRERK Trigger: CTTCCTCTCTCTGCAGCTGGATCCCTCCATCATTCATGATGGCTGGCTCGATTTCTTAAGCTCCAAGCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 72 bp | TTCCCAACTGGCTACCATTTACTGCCCGGCCATGGATaGTCCGATAGTTATTTGGCTCATTACCCAGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPTGYHLLPGHG*SDSYLAHYPVP Trigger: GGGAACTGGGTAATGAGCCAAATAACTATCGGAGCATCCATGGCCGGGCAGTAAATGGTAGCCAGTTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | ACATCAGGGTGCTGGGCAATCTTACAGCCTTTCTGCTaGTCCAAGGCAACATCACTCCGGACAATGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TSGCWAILQPFC*SKATSLRTMSS Trigger: GGATGACATTGTCCGGAGTGATGTTGCCTTGGACAAGCAGAAAGGCTGTAAGATTGCCCAGCACCCTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | TATCTAACAGACGAGTTTTCAGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGTAGCAATGTTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YLTDEFSGSPSP*PPGHQCSNVAR Trigger: CCTGGCAACATTGCTACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCTGAAAACTCGTCTGTTAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | CTGGTCCACCAGATGGTTGTATCCGTGGTCGAAAAATaGATGTCGTATCACGACATCAATGCCCTGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVHQMVVSVVEK*MSYHDINALIG Trigger: GCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGACCACGGATACAACCATCTGGTGGACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 90 bp | AGCTGCAGAGAGAGGAAGTTCTCATTGACTGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGAATCAGGGTCTTTTCCTTCAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: SCRERKFSLTVLTGF*VLTSSRIRVFSFKP Trigger: AGGTTTGAAGGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTCAATGAGAACTTCCTCTCTCTGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 90 bp | CTGTACTTCAACAGGCTCAGGGCACTAGAACTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCATTTAGAGCAAATATCAGGTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LYFNRLRALELFQEL*GLRRSAFRANIRWS Trigger: ACTCCACCTGATATTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGCCTGTTGAAGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | GAGAGGAAGTTCTCATTGACTGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGAATCAGGGTCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERKFSLTVLTGF*VLTSSRIRVFS Trigger: GGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTCAATGAGAACTTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | TGGTGCACGAGCTTGTCCCTCAGAGTCCCAGCCAGTTaGATTTTCTTTCTTGATCGATGTAGGTTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: WCTSLSLRVPAS*IFFLDRCRLMM Trigger: CATCATCAACCTACATCGATCAAGAAAGAAAATCAAACTGGCTGGGACTCTGAGGGACAAGCTCGTGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 90 bp | AGCAGATACTGGTGCACGAGCTTGTCCCTCAGAGTCCCAGCCAGTTaGATTTTCTTTCTTGATCGATGTAGGTTGATGATGAAAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRYWCTSLSLRVPAS*IFFLDRCRLMMKSV Trigger: CACACTTTTCATCATCAACCTACATCGATCAAGAAAGAAAATCAAACTGGCTGGGACTCTGAGGGACAAGCTCGTGCACCAGTATCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | AACAGGCTCAGGGCACTAGAACTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCATTTAGAGCAAATATC | + |
|
Preference number: 6 (lower is better) Translates to: NRLRALELFQEL*GLRRSAFRANI Trigger: GATATTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGCCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS GCA 72 bp | CGTGGTCGAAAAATGAATGTCGTATCACGACATCAATaGCCTGATTGGCCAACATTCCTAAAGTGTTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGRKMNVVSRHQ*PDWPTFLKCLA Trigger: GGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGACCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CCA 72 bp | GGGTTAAAATTCTGGTCCACCAGATGGTTGTATCCGTaGTCGAAAAATGAATGTCGTATCACGACATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: GLKFWSTRWLYP*SKNECRITTSM Trigger: CATTGATGTCGTGATACGACATTCATTTTTCGACCACGGATACAACCATCTGGTGGACCAGAATTTTAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS CAA 72 bp | TCTGGTAATGGGTTAAAATTCTGGTCCACCAGATGGTaGTATCCGTGGTCGAAAAATGAATGTCGTATCACG | + |
|
Preference number: 6 (lower is better) Translates to: SGNGLKFWSTRW*YPWSKNECRIT Trigger: CGTGATACGACATTCATTTTTCGACCACGGATACAACCATCTGGTGGACCAGAATTTTAACCCATTACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
||
| CDS TCA 72 bp | TCGAAAAATGAATGTCGTATCACGACATCAATGCCCTaGTTGGCCAACATTCCTAAAGTGTTTAGCCATAAG | + |
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Preference number: 6 (lower is better) Translates to: SKNECRITTSMP*LANIPKVFSHK Trigger: CTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTTTCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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| CDS CCA 72 bp | AAAATGAATGTCGTATCACGACATCAATGCCCTGATTaGCCAACATTCCTAAAGTGTTTAGCCATAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: KMNVVSRHQCPD*PTFLKCLAIRI Trigger: GATTCTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATACGACATTCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099428.5 |
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