Pregenerated sensors for HPSE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035273Ensembl transcript IDs: ENSMUST00000045617.15, ENSMUST00000112908.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTTACCGTCATTTCCAAACCACAGGCATCGCTTCCCTCTCGGCTaGTCTTTTATTCGCCTTTGTTTAAGACTACTCCACCCAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: PLPSFPNHRHRFPLG*SFIRLCLRLLHPAI Trigger: GATGGCTGGGTGGAGTAGTCTTAAACAAAGGCGAATAAAAGACCAGCCGAGAGGGAAGCGATGCCTGTGGTTTGGAAATGACGGTAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR GCA 90 bp | ACCTCTCTGCCCCAGGGAGTATTGCTTGAATACAGTTGTAGGCATTaGTACTCATGGATGGTGACGAGAAATGACCACAGACCTATTCCT | + |
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Preference number: 1 (lower is better) Translates to: TSLPQGVLLEYSCRH*YSWMVTRNDHRPIP Trigger: AGGAATAGGTCTGTGGTCATTTCTCGTCACCATCCATGAGTAGCAATGCCTACAACTGTATTCAAGCAATACTCCCTGGGGCAGAGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR GCA 90 bp | GGGCTAAGCGTCATTTGCCACACAGTGCTATTAACTGTCACCACCTaGAGTATTCTTCTTAGAGGAGAACACCACACTGAATGTAATACT | + |
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Preference number: 1 (lower is better) Translates to: GLSVICHTVLLTVTT*SILLRGEHHTECNT Trigger: AGTATTACATTCAGTGTGGTGTTCTCCTCTAAGAAGAATACTGCAGGTGGTGACAGTTAATAGCACTGTGTGGCAAATGACGCTTAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCGGGCTAAGCGTCATTTaGCACACAGTGCTATTAACT | + |
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Preference number: 2 (lower is better) Translates to: SQWGVTAMRLPPLELERGGLSVI*HTVLLT Trigger: AGTTAATAGCACTGTGTGGCAAATGACGCTTAGCCC...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGCTAGAGAGAGGCCCCTaGAGGTCATATTTGACAATC | + |
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Preference number: 2 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRLERGP*RSYLTI Trigger: GATTGTCAAATATGACCTTCAGGGGCCTCTCTCTAG...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR CAA 90 bp | AAACCACAGGCATCGCTTCCCTCTCGGCTGGTCTTTTATTCGCCTTaGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: KPQASLPSRLVFYSP*FKTTPPSHLSFPRL Trigger: AAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAAAGGCGAATAAAAGACCAGCCGAGAGGGAAGCGATGCCTGTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR GCA 90 bp | GACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGCTGACATGCTCAGCTTATCCTCCACTTATTTaGCTTTTGGTCACATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DIGTEREKEDGPLLTCSAYPPLI*LLVTLE Trigger: CTCCAATGTGACCAAAAGGCAAATAAGTGGAGGATA...AGCTGAGCATGTCAGCAGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR CCA 90 bp | GACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGCTGACATGCTCAGCTGCCTTTTGGTCACATTaGAGGCATTCCTATACATTT | + |
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Preference number: 2 (lower is better) Translates to: DIGTEREKEDGPLLTCSAAFWSH*RHSYTF Trigger: AAATGTATAGGAATGCCTCCAATGTGACCAAAAGGC...AGCTGAGCATGTCAGCAGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR CCA 90 bp | GGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGACAAAGCAACAGCTATTaGTGTAGAAAAAGTAAACCC | + |
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Preference number: 2 (lower is better) Translates to: GQEGSQHYRHRDREGERRQSNSY*CRKSKP Trigger: GGGTTTACTTTTTCTACACCAATAGCTGTTGCTTTG...TCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACCACTTATTTGCCTTTTaGTCACATTGGAGGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: LFKTTPPSHLSFPRLVKDHLFAF*SHWRHS Trigger: GGAATGCCTCCAATGTGACCAAAAGGCAAATAAGTG...GTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR GCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAACTTACATAAAGTTTaGAGCCAACAGGAGACTTTA | + |
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Preference number: 2 (lower is better) Translates to: YTEWILICEDIWDCRYSSNLHKV*SQQETL Trigger: TAAAGTCTCCTGTTGGCTGCAAACTTTATGTAAGTT...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| 3UTR TCA 72 bp | TCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGCTaGCATGCTCAGCTGTCCAACCCTACCTCACTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SGQRGRKKMGPC*HAQLSNPTSLQ Trigger: TTGAAGTGAGGTAGGGTTGGACAGCTGAGCATGTCAGCAGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR CCA 72 bp | TGTAATACTGAAGTGTACCCCACCCTCCCGAAGCTCTaGAACTCGGCAAGGAGGTGGCCTCCTAAACTAGGG | + |
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Preference number: 3 (lower is better) Translates to: CNTEVYPTLPKL*NSARRWPPKLG Trigger: CCCTAGTTTAGGAGGCCACCTCCTTGCCGAGTTCCAGAGCTTCGGGAGGGTGGGGTACACTTCAGTATTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCATATCCTCCACTTATTaGCCTTTTGGTCACATTGGA | + |
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Preference number: 3 (lower is better) Translates to: SQWGVTAMRLPPLELERGISSTY*PFGHIG Trigger: TCCAATGTGACCAAAAGGCAAATAAGTGGAGGATAT...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGTGCCTTTTGGTCACATaGGAGGCATTCCTATACATT | + |
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Preference number: 3 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRCLLVT*EAFLYI Trigger: AATGTATAGGAATGCCTCCAATGTGACCAAAAGGCA...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR GCA 72 bp | GTGGACTCCACTAAACCTCTCTGCCCCAGGGAGTATTaGTTGAATACAGTTGTAGGCATTGCTACTCATGGA | + |
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Preference number: 3 (lower is better) Translates to: VDSTKPLCPREY*LNTVVGIATHG Trigger: TCCATGAGTAGCAATGCCTACAACTGTATTCAAGCAATACTCCCTGGGGCAGAGAGGTTTAGTGGAGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR GCA 72 bp | CCCCAGGGAGTATTGCTTGAATACAGTTGTAGGCATTaGTACTCATGGATGGTGACGAGAAATGACCACAGA | + |
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Preference number: 3 (lower is better) Translates to: PQGVLLEYSCRH*YSWMVTRNDHR Trigger: TCTGTGGTCATTTCTCGTCACCATCCATGAGTAGCAATGCCTACAACTGTATTCAAGCAATACTCCCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR CCA 72 bp | TTTTGTTACTTAATCCAAAGCAAGTGTCCAGTGCCGTaGACTCCACTAAACCTCTCTGCCCCAGGGAGTATT | + |
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Preference number: 3 (lower is better) Translates to: FCYLIQSKCPVP*TPLNLSAPGSI Trigger: AATACTCCCTGGGGCAGAGAGGTTTAGTGGAGTCCACGGCACTGGACACTTGCTTTGGATTAAGTAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR TCA 72 bp | CAGACCTATTCCTTGCCGGTAAGACTTGAGGAGACTTaGGGAAAGGCTTGCGAAGATAACTTCCAAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: QTYSLPVRLEET*GKACEDNFQER Trigger: TCTTTCTTGGAAGTTATCTTCGCAAGCCTTTCCTCAAGTCTCCTCAAGTCTTACCGGCAAGGAATAGGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR GCA 72 bp | GTCATTTGCCACACAGTGCTATTAACTGTCACCACCTaGAGTATTCTTCTTAGAGGAGAACACCACACTGAA | + |
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Preference number: 3 (lower is better) Translates to: VICHTVLLTVTT*SILLRGEHHTE Trigger: TTCAGTGTGGTGTTCTCCTCTAAGAAGAATACTGCAGGTGGTGACAGTTAATAGCACTGTGTGGCAAATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR CCA 72 bp | GTATTGCTTGAATACAGTTGTAGGCATTGCTACTCATaGATGGTGACGAGAAATGACCACAGACCTATTCCT | + |
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Preference number: 3 (lower is better) Translates to: VLLEYSCRHCYS*MVTRNDHRPIP Trigger: AGGAATAGGTCTGTGGTCATTTCTCGTCACCATCCATGAGTAGCAATGCCTACAACTGTATTCAAGCAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCGAGAGCCCAGGAAGGTaGGGAAGCGCGGGTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SQWGVTAMRLPPLELERGESPGR*GSAGRW Trigger: CCACCGACCCGCGCTTCCTCACCTTCCTGGGCTCTC...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCGGCTGGCGTCGATGGTaGTGGACAGGAACGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SQWGVTAMRLPPLELERGGWRRW*WTGTRD Trigger: GTCCCTCGTTCCTGTCCATCACCATCGACGCCAGCC...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | GACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGCTGACATGCTCAGCTAGCAGCAACAGCTCCTaGAAGGGCCATTCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: DIGTEREKEDGPLLTCSASSNSS*KGHSTW Trigger: CCAGGTGGAATGGCCCTTCCAGGAGCTGTTGCTGCT...AGCTGAGCATGTCAGCAGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | AGCCATCACGTGCCCAGGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGCCACATAAAGCCAGCTaGAAAGGTGTTGGACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SHHVPRPRREPALQTSGQPHKAS*KGVGQQ Trigger: TTGCTGTCCAACACCTTTGCAGCTGGCTTTATGTGG...CTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCCTGGGCACGTGATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | GGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTAAAGCTGGCAGGGTCTaGTCATCCACCATCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GSQHYRHRDREGERRWAPKAGRV*SSTIFR Trigger: TCTGAAGATGGTGGATGAGCAGACCCTGCCAGCTTT...AGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGGGAGAAGCTGGGCGTTaGAGCTGTTCCACCGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRGEAGR*SCSTVS Trigger: ACTTACGGTGGAACAGCTCCAACGCCCAGCTTCTCC...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGTCATCACGACTTCTATaGCCATCTGGGCTGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRSSRLL*PSGLTG Trigger: GCCTGTCAGCCCAGATGGGCATAGAAGTCGTGATGA...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCTGCAAATATCATGGTTaGCTTGAGATTTCCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: SQWGVTAMRLPPLELERGCKYHG*LEISSN Trigger: GTTACTGGAAATCTCAAGTCAACCATGATATTTGCA...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | GACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGCTGACATGCTCAGCTGACCTACCAGTTTCTTaGACAGAAGAGAGAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DIGTEREKEDGPLLTCSADLPVS*TEERAS Trigger: ACTGGCTCTCTCTTCTGTTCAAGAAACTGGTAGGTC...AGCTGAGCATGTCAGCAGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | GGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGGAAGTCAGTCTTTGTaGCGCCAAATCTCAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: GSQHYRHRDREGERRWAPGSQSL*RQISSM Trigger: CATACTTGAGATTTGGCGGCACAAAGACTGACTTCC...AGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | AGCCATCACGTGCCCAGGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGAAGTCTTCTCCTAACTaGAACCCATCGATGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: SHHVPRPRREPALQTSGQKSSPN*NPSMRM Trigger: CATTCTCATCGATGGGTTGCAGTTAGGAGAAGACTT...CTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCCTGGGCACGTGATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGGATACACTCGGAGTTTaGTCCTGTCTGGGCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRDTLGV*SCLGLS Trigger: TGAAAGGCCCAGACAGGAGCAAACTCCGAGTGTATC...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | TTGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACCAGAGCACGGAGCCTTaGAGAGCCCAGGAAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LFKTTPPSHLSFPRLVKDQSTEP*RAQEGE Trigger: CTCACCTTCCTGGGCTCTCCAAGGCTCCGTGCTCTG...GTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGTCTTCCAGAAACTGTTaGGCTCATTGCCCAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRSSRNC*AHCPVP Trigger: GGGAACTGGGCAATGAGCCCAACAGTTTCTGGAAGA...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | GGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGACCTTCAAGTGCTTGGTaGCATTATGGAGGTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQEGSQHYRHRDREGERRPSSAW*HYGGSG Trigger: TCCTGAACCTCCATAATGTCACCAAGCACTTGAAGG...TCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | AGCCATCACGTGCCCAGGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGAGATGTTATAACCCTTaGAAGAGCAGTAGTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SHHVPRPRREPALQTSGQRCYNP*KSSSQG Trigger: TCCTTGACTACTGCTCTTCCAAGGGTTATAACATCT...CTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCCTGGGCACGTGATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | TTGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACCAGCTGCAAAGGTGTTaGACAGCAAGGGTGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: LFKTTPPSHLSFPRLVKDQLQRC*TARVHR Trigger: GCGGTGCACCCTTGCTGTCCAACACCTTTGCAGCTG...GTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | GGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATCAGTTGGACAGATTTaGAAAGTAATCCATCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GQEGSQHYRHRDREGERRSVGQI*KVIHPA Trigger: GGCCGGATGGATTACTTTCCAAATCTGTCCAACTGA...TCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTGAGAGCCCAGGAAGGTaGGGAAGCGCGGGTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSESPGR*GSAGRW Trigger: CCACCGACCCGCGCTTCCTCACCTTCCTGGGCTCTC...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | GGCCAAGAAGGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATGCTTGGTGACATTATaGAGGTTCAGGACATACAGA | + |
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Preference number: 4 (lower is better) Translates to: GQEGSQHYRHRDREGERRCLVTL*RFRTYR Trigger: TCTGTATGTCCTGAACCTCCATAATGTCACCAAGCA...TCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCCTTCTTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| 3UTR CAA 72 bp | GACTCCACTAAACCTCTCTGCCCCAGGGAGTATTGCTaGAATACAGTTGTAGGCATTGCTACTCATGGATGG | + |
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Preference number: 4 (lower is better) Translates to: DSTKPLCPREYC*NTVVGIATHGW Trigger: CCATCCATGAGTAGCAATGCCTACAACTGTATTCAAGCAATACTCCCTGGGGCAGAGAGGTTTAGTGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | TTGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACACTTCTATGCCCATCTaGGCTGACAGGCCCAATTTA | + |
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Preference number: 4 (lower is better) Translates to: LFKTTPPSHLSFPRLVKDTSMPI*ADRPNL Trigger: TAAATTGGGCCTGTCAGCCCAGATGGGCATAGAAGT...GTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR TCA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTGGCTGGCGTCGATGGTaGTGGACAGGAACGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ILICEDIWDCRYSSRLLVGWRRW*WTGTRD Trigger: GTCCCTCGTTCCTGTCCATCACCATCGACGCCAGCC...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR TCA 90 bp | TTGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACAGTAGGTGCTGTTCTTaGACTCCTTTTGGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFKTTPPSHLSFPRLVKDSRCCS*TPFGTA Trigger: AGCAGTACCAAAAGGAGTTCAAGAACAGCACCTACT...GTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CCA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTCAGAGCACGGAGCCTTaGAGAGCCCAGGAAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSQSTEP*RAQEGE Trigger: CTCACCTTCCTGGGCTCTCCAAGGCTCCGTGCTCTG...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTAGCAGCAACAGCTCCTaGAAGGGCCATTCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILICEDIWDCRYSSRLLVSSNSS*KGHSTW Trigger: CCAGGTGGAATGGCCCTTCCAGGAGCTGTTGCTGCT...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCCAGCTGCAAAGGTGTTaGACAGCAAGGGTGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: YTEWILICEDIWDCRYSSQLQRC*TARVHR Trigger: GCGGTGCACCCTTGCTGTCCAACACCTTTGCAGCTG...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTAAGACTACTCCACCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACCTTTGTAGAAGTTTATaGAACTCCACAAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFKTTPPSHLSFPRLVKDLCRSL*NSTKSS Trigger: AGAAGACTTTGTGGAGTTGCATAAACTTCTACAAAG...GTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGGTGGAGTAGTCTTAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR GCA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTTCATCACGACTTCTATaGCCATCTGGGCTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILICEDIWDCRYSSRLLVSSRLL*PSGLTG Trigger: GCCTGTCAGCCCAGATGGGCATAGAAGTCGTGATGA...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR GCA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTGATACACTCGGAGTTTaGTCCTGTCTGGGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSDTLGV*SCLGLS Trigger: TGAAAGGCCCAGACAGGAGCAAACTCCGAGTGTATC...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTTCTTCCAGAAACTGTTaGGCTCATTGCCCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSSSRNC*AHCPVP Trigger: GGGAACTGGGCAATGAGCCCAACAGTTTCTGGAAGA...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTACTTCTATGCCCATCTaGGCTGACAGGCCCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSTSMPI*ADRPNL Trigger: TAAATTGGGCCTGTCAGCCCAGATGGGCATAGAAGT...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR TCA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTGACCTACCAGTTTCTTaGACAGAAGAGAGAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILICEDIWDCRYSSRLLVDLPVS*TEERAS Trigger: ACTGGCTCTCTCTTCTGTTCAAGAAACTGGTAGGTC...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR TCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCCCTTCAAGTGCTTGGTaGCATTATGGAGGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTEWILICEDIWDCRYSSPSSAW*HYGGSG Trigger: TCCTGAACCTCCATAATGTCACCAAGCACTTGAAGG...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR GCA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTCCACATAAAGCCAGCTaGAAAGGTGTTGGACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILICEDIWDCRYSSRLLVPHKAS*KGVGQQ Trigger: TTGCTGTCCAACACCTTTGCAGCTGGCTTTATGTGG...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTAGTAGGTGCTGTTCTTaGACTCCTTTTGGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILICEDIWDCRYSSRLLVSRCCS*TPFGTA Trigger: AGCAGTACCAAAAGGAGTTCAAGAACAGCACCTACT...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR GCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCGGAAGTCAGTCTTTGTaGCGCCAAATCTCAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: YTEWILICEDIWDCRYSSGSQSL*RQISSM Trigger: CATACTTGAGATTTGGCGGCACAAAGACTGACTTCC...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR GCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAAGTCTTCTCCTAACTaGAACCCATCGATGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: YTEWILICEDIWDCRYSSKSSPN*NPSMRM Trigger: CATTCTCATCGATGGGTTGCAGTTAGGAGAAGACTT...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCTGCTTGGTGACATTATaGAGGTTCAGGACATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTEWILICEDIWDCRYSSCLVTL*RFRTYR Trigger: TCTGTATGTCCTGAACCTCCATAATGTCACCAAGCA...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CCA 90 bp | TATACTGAATGGATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGATGTTATAACCCTTaGAAGAGCAGTAGTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTEWILICEDIWDCRYSSRCYNP*KSSSQG Trigger: TCCTTGACTACTGCTCTTCCAAGGGTTATAACATCT...GGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGATCCATTCAGTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCAGATACACTCGGAGTTaGCTCCTGTCTGGGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQWGVTAMRLPPLELERGRYTRS*LLSGPF Trigger: GAAAGGCCCAGACAGGAGCAAACTCCGAGTGTATCT...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS CCA 90 bp | TACTGCTCTCGGAGCAGCAACAGCTCCTGGAAGGGCCATTCCACCTaGAGTTTCCTCAACACCGCAGCAGAGACCGGCTCAGACCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YCSRSSNSSWKGHST*SFLNTAAETGSDLQ Trigger: TTGCAGGTCTGAGCCGGTCTCTGCTGCGGTGTTGAGGAAACTCCAGGTGGAATGGCCCTTCCAGGAGCTGTTGCTGCTCCGAGAGCAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCTTCTTCCAGAAACTGTaGGGCTCATTGCCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQWGVTAMRLPPLELERGFFQKL*GSLPSS Trigger: GGAACTGGGCAATGAGCCCAACAGTTTCTGGAAGAA...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CAA 90 bp | GACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTGCTGACATGCTCAGCTCCAGCTGCAAAGGTGTaGGACAGCAAGGGTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: DIGTEREKEDGPLLTCSAPAAKV*DSKGAP Trigger: CGGTGCACCCTTGCTGTCCAACACCTTTGCAGCTGG...AGCTGAGCATGTCAGCAGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS TCA 90 bp | AGCTGCAAAGGTGTTGGACAGCAAGGGTGCACCGCCACCGTAAGCTaGGCTCGTCTCTCCCAACCAGACCTTCTTGCCAGGTGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCKGVGQQGCTATVS*ARLSQPDLLARCDL Trigger: GAGATCACACCTGGCAAGAAGGTCTGGTTGGGAGAGACGAGCTCAGCTTACGGTGGCGGTGCACCCTTGCTGTCCAACACCTTTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTCTGGGCCTTTCACTCTaGACAGTAACACCCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSQHYRHRDREGERRWAPLGLSL*TVTPWD Trigger: GTCCCAGGGTGTTACTGTCAAGAGTGAAAGGCCCAG...AGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CAA 90 bp | AGCCAGTGGGGCGTTACGGCAATGCGCCTTCCCCCACTGGAGCTAGAGAGAGGCCACCATCTTCAGAATTaGACCGTTCAGTTGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQWGVTAMRLPPLELERGHHLQN*TVQLDR Trigger: TCTGTCCAACTGAACGGTCAAATTCTGAAGATGGTG...GCCTCTCTCTAGCTCCAGTGGGGGAAGGCGCATTGCCGTAACGCCCCACTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS CCA 90 bp | TTCTTGAACTCCTTTTGGTACTGCTCTCGGAGCAGCAACAGCTCCTaGAAGGGCCATTCCACCTGGAGTTTCCTCAACACCGCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLNSFWYCSRSSNSS*KGHSTWSFLNTAAE Trigger: CTCTGCTGCGGTGTTGAGGAAACTCCAGGTGGAATGGCCCTTCCAGGAGCTGTTGCTGCTCCGAGAGCAGTACCAAAAGGAGTTCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 90 bp | CCTGCTCCGAAGAACACCTGCCTCATCACGACTTCTATGCCCATCTaGGCTGACAGGCCCAATTTATCCAGCCACATAAAGCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPKNTCLITTSMPI*ADRPNLSSHIKPAA Trigger: TGCAGCTGGCTTTATGTGGCTGGATAAATTGGGCCTGTCAGCCCAGATGGGCATAGAAGTCGTGATGAGGCAGGTGTTCTTCGGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTCAGGACCATAGAGTTTaGCATTTTGGAAAGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GSQHYRHRDREGERRWAPQDHRV*HFGKLT Trigger: GGTCAGCTTTCCAAAATGCAAAACTCTATGGTCCTG...AGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CAA 90 bp | GGGAGCCAGCACTACAGACATCGGGACAGAGAGGGAGAAAGAAGATGGGCCCCTCTCAGAAAATCTTCTTaGGTAGCGATGCGTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GSQHYRHRDREGERRWAPLRKSS*VAMRPF Trigger: GAATGGACGCATCGCTACCAAAGAAGATTTTCTGAG...AGGGGCCCATCTTCTTTCTCCCTCTCTGTCCCGATGTCTGTAGTGCTGGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CAA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGGGACCTACCAGTTTCTaGAACAGAAGAGAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRGPTSF*NRRESQ Trigger: CTGGCTCTCTCTTCTGTTCAAGAAACTGGTAGGTCC...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS TCA 90 bp | TCCGAAGAACACCTGCCTCATCACGACTTCTATGCCCATCTGGGCTaGCAGGCCCAATTTATCCAGCCACATAAAGCCAGCTGCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEEHLPHHDFYAHLG*QAQFIQPHKASCKG Trigger: ACCTTTGCAGCTGGCTTTATGTGGCTGGATAAATTGGGCCTGTCAGCCCAGATGGGCATAGAAGTCGTGATGAGGCAGGTGTTCTTCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 90 bp | AACTGTTGGGCTCATTGCCCAGTTCCCAGGAGATGTTATAACCCTTaGAAGAGCAGTAGTCAAGGAGAAGCTGGGCGTTGGAGCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCWAHCPVPRRCYNP*KSSSQGEAGRWSCS Trigger: GGAACAGCTCCAACGCCCAGCTTCTCCTTGACTACTGCTCTTCCAAGGGTTATAACATCTCCTGGGAACTGGGCAATGAGCCCAACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGGGTACCTTCAAGTGCTaGGTGACATTATGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRGTFKC*VTLWRF Trigger: GAACCTCCATAATGTCACCAAGCACTTGAAGGTACC...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS-3UTR CAA 90 bp | CCCAGCCATCTGTCCTTTCCCAGACTTGTGAAGGACGAAGAGAAGAGGCACAGGTTCAGTTGGACAGATTaGGAAAGTAATCCATCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSHLSFPRLVKDEEKRHRFSWTD*ESNPSG Trigger: GCCGGATGGATTACTTTCCAAATCTGTCCAACTGAA...CCTGTGCCTCTTCTCTTCGTCCTTCACAAGTCTGGGAAAGGACAGATGGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS TCA 90 bp | AACTGTAGAGCATGTCCACTGAGCTTCTTGAGTAGGTGCTGTTCTTaGACTCCTTTTGGTACTGCTCTCGGAGCAGCAACAGCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NCRACPLSFLSRCCS*TPFGTALGAATAPG Trigger: TCCAGGAGCTGTTGCTGCTCCGAGAGCAGTACCAAAAGGAGTTCAAGAACAGCACCTACTCAAGAAGCTCAGTGGACATGCTCTACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 90 bp | TCTGTCAAAGCTGGCAGGGTCTGCTCATCCACCATCTTCAGAATTTaGCCGTTCAGTTGGACAGATTTGGAAAGTAATCCATCCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVKAGRVCSSTIFRI*PFSWTDLESNPSGP Trigger: GGGGCCGGATGGATTACTTTCCAAATCTGTCCAACTGAACGGTCAAATTCTGAAGATGGTGGATGAGCAGACCCTGCCAGCTTTGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS CCA 90 bp | TGTTATAACCCTTGGAAGAGCAGTAGTCAAGGAGAAGCTGGGCGTTaGAGCTGTTCCACCGTAAGTCTGGGGTTCGTAGTAACGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: CYNPWKSSSQGEAGR*SCSTVSLGFVVTHL Trigger: TAAATGCGTTACTACGAACCCCAGACTTACGGTGGAACAGCTCCAACGCCCAGCTTCTCCTTGACTACTGCTCTTCCAAGGGTTATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 90 bp | TCAACACCGCAGCAGAGACCGGCTCAGACCTGCAAATATCATGGTTaGCTTGAGATTTCCAGTAACTTCTTTCTTCGGAAGTCGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STPQQRPAQTCKYHG*LEISSNFFLRKSVP Trigger: AGGAACCGACTTCCGAAGAAAGAAGTTACTGGAAATCTCAAGTCAACCATGATATTTGCAGGTCTGAGCCGGTCTCTGCTGCGGTGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 90 bp | AACTCCACAAAGTCTTCTCCTAACTGCAACCCATCGATGAGAATGTaGGCTTTCTTCCAGAAACTGTTGGGCTCATTGCCCAGTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTKSSPNCNPSMRM*AFFQKLLGSLPSSQ Trigger: CTGGGAACTGGGCAATGAGCCCAACAGTTTCTGGAAGAAAGCTCACATTCTCATCGATGGGTTGCAGTTAGGAGAAGACTTTGTGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 90 bp | GTAGTAACGCATTTAGACCAAAGATCAGGTCTAACCCCGAGCACTTaGCAAAACTGTAGAGCATGTCCACTGAGCTTCTTGAGTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVTHLDQRSGLTPST*QNCRACPLSFLSRC Trigger: GCACCTACTCAAGAAGCTCAGTGGACATGCTCTACAGTTTTGCCAAGTGCTCGGGGTTAGACCTGATCTTTGGTCTAAATGCGTTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS GCA 90 bp | AGTAATCAGGTAAAGGCTCAAAGTTTTCATCCACTAAGTGGTAGTTaGCTGCTCCGAAGAACACCTGCCTCATCACGACTTCTATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SNQVKAQSFHPLSGS*LLRRTPASSRLLCP Trigger: TGGGCATAGAAGTCGTGATGAGGCAGGTGTTCTTCGGAGCAGGCAACTACCACTTAGTGGATGAAAACTTTGAGCCTTTACCTGATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS GCA 90 bp | TACGTATCCACTGGTTTCCTGAACAACGGAGGCGGTACCTTCAAGTaGTTGGTGACATTATGGAGGTTCAGGACATACAGAGTTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: YVSTGFLNNGGGTFK*LVTLWRFRTYRVRS Trigger: AGATCTAACTCTGTATGTCCTGAACCTCCATAATGTCACCAAGCACTTGAAGGTACCGCCTCCGTTGTTCAGGAAACCAGTGGATACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 90 bp | GTTTATGCAACTCCACAAAGTCTTCTCCTAACTGCAACCCATCGATaGGAATGTGAGCTTTCTTCCAGAAACTGTTGGGCTCATTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYATPQSLLLTATHR*ECELSSRNCWAHCP Trigger: TGGGCAATGAGCCCAACAGTTTCTGGAAGAAAGCTCACATTCTCATCGATGGGTTGCAGTTAGGAGAAGACTTTGTGGAGTTGCATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTCCAGCTGCAAAGGTGTaGGACAGCAAGGGTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ILICEDIWDCRYSSRLLVPAAKV*DSKGAP Trigger: CGGTGCACCCTTGCTGTCCAACACCTTTGCAGCTGG...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTCTGGGCCTTTCACTCTaGACAGTAACACCCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILICEDIWDCRYSSRLLVLGLSL*TVTPWD Trigger: GTCCCAGGGTGTTACTGTCAAGAGTGAAAGGCCCAG...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTAGATACACTCGGAGTTaGCTCCTGTCTGGGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSRYTRS*LLSGPF Trigger: GAAAGGCCCAGACAGGAGCAAACTCCGAGTGTATCT...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTGGACCTACCAGTTTCTaGAACAGAAGAGAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSGPTSF*NRRESQ Trigger: CTGGCTCTCTCTTCTGTTCAAGAAACTGGTAGGTCC...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTGATATGTGAAGATATTTGGGACTGCAGATATTCTTCCAGGCTATTAGTTTTCTTCCAGAAACTGTaGGGCTCATTGCCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILICEDIWDCRYSSRLLVFFQKL*GSLPSS Trigger: GGAACTGGGCAATGAGCCCAACAGTTTCTGGAAGAA...AACTAATAGCCTGGAAGAATATCTGCAGTCCCAAATATCTTCACATATCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTGGTACCTTCAAGTGCTaGGTGACATTATGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSGTFKC*VTLWRF Trigger: GAACCTCCATAATGTCACCAAGCACTTGAAGGTACC...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS-3UTR CAA 90 bp | GGGATCTGGGAGGACTTGAGAAAAGAAGGATACGATTCAAATATATTTAAGAGTCAGGACCATAGAGTTTaGCATTTTGGAAAGCTGACC | + |
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Preference number: 5 (lower is better) Translates to: GIWEDLRKEGYDSNIFKSQDHRV*HFGKLT Trigger: GGTCAGCTTTCCAAAATGCAAAACTCTATGGTCCTG...ACTCTTAAATATATTTGAATCGTATCCTTCTTTTCTCAAGTCCTCCCAGATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112908.2 |
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| CDS TCA 72 bp | GGTGTTGGACAGCAAGGGTGCACCGCCACCGTAAGCTaGGCTCGTCTCTCCCAACCAGACCTTCTTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GVGQQGCTATVS*ARLSQPDLLAR Trigger: CCTGGCAAGAAGGTCTGGTTGGGAGAGACGAGCTCAGCTTACGGTGGCGGTGCACCCTTGCTGTCCAACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | CGGAGCAGCAACAGCTCCTGGAAGGGCCATTCCACCTaGAGTTTCCTCAACACCGCAGCAGAGACCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSSNSSWKGHST*SFLNTAAETGS Trigger: TGAGCCGGTCTCTGCTGCGGTGTTGAGGAAACTCCAGGTGGAATGGCCCTTCCAGGAGCTGTTGCTGCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | ACAGGAACGAGGGACTCACGCTTCGGAGCGGCCGCTTaGTGTAAAACTCCAAGTCTACCACGTCGTCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: TGTRDSRFGAAA*CKTPSLPRRRS Trigger: CGACCGACGACGTGGTAGACTTGGAGTTTTACACCAAGCGGCCGCTCCGAAGCGTGAGTCCCTCGTTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS GCA 72 bp | CTGCTCCGAAGAACACCTGCCTCATCACGACTTCTATaGCCATCTGGGCTGACAGGCCCAATTTATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLRRTPASSRLL*PSGLTGPIYPA Trigger: GGCTGGATAAATTGGGCCTGTCAGCCCAGATGGGCATAGAAGTCGTGATGAGGCAGGTGTTCTTCGGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | TCCTTTTGGTACTGCTCTCGGAGCAGCAACAGCTCCTaGAAGGGCCATTCCACCTGGAGTTTCCTCAACACC | + |
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Preference number: 6 (lower is better) Translates to: SFWYCSRSSNSS*KGHSTWSFLNT Trigger: GGTGTTGAGGAAACTCCAGGTGGAATGGCCCTTCCAGGAGCTGTTGCTGCTCCGAGAGCAGTACCAAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | GCTCATTGCCCAGTTCCCAGGAGATGTTATAACCCTTaGAAGAGCAGTAGTCAAGGAGAAGCTGGGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: AHCPVPRRCYNP*KSSSQGEAGRW Trigger: CCAACGCCCAGCTTCTCCTTGACTACTGCTCTTCCAAGGGTTATAACATCTCCTGGGAACTGGGCAATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | TGCACTTCCTGCGGGGAGAGGTTTTTCTGTCAAAGCTaGCAGGGTCTGCTCATCCACCATCTTCAGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: CTSCGERFFCQS*QGLLIHHLQNL Trigger: CAAATTCTGAAGATGGTGGATGAGCAGACCCTGCCAGCTTTGACAGAAAAACCTCTCCCCGCAGGAAGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS TCA 72 bp | GCATGTCCACTGAGCTTCTTGAGTAGGTGCTGTTCTTaGACTCCTTTTGGTACTGCTCTCGGAGCAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: ACPLSFLSRCCS*TPFGTALGAAT Trigger: TGTTGCTGCTCCGAGAGCAGTACCAAAAGGAGTTCAAGAACAGCACCTACTCAAGAAGCTCAGTGGACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | AAGAACACCTGCCTCATCACGACTTCTATGCCCATCTaGGCTGACAGGCCCAATTTATCCAGCCACATAAAG | + |
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Preference number: 6 (lower is better) Translates to: KNTCLITTSMPI*ADRPNLSSHIK Trigger: CTTTATGTGGCTGGATAAATTGGGCCTGTCAGCCCAGATGGGCATAGAAGTCGTGATGAGGCAGGTGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CAA 90 bp | CACCGCAGCAGAGACCGGCTCAGACCTGCAAATATCATGGTTGACTaGAGATTTCCAGTAACTTCTTTCTTCGGAAGTCGGTTCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: HRSRDRLRPANIMVD*RFPVTSFFGSRFLV Trigger: GACAAGGAACCGACTTCCGAAGAAAGAAGTTACTGGAAATCTCAAGTCAACCATGATATTTGCAGGTCTGAGCCGGTCTCTGCTGCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS GCA 72 bp | ACTGGTTTCCTGAACAACGGAGGCGGTACCTTCAAGTaGTTGGTGACATTATGGAGGTTCAGGACATACAGA | + |
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Preference number: 6 (lower is better) Translates to: TGFLNNGGGTFK*LVTLWRFRTYR Trigger: TCTGTATGTCCTGAACCTCCATAATGTCACCAAGCACTTGAAGGTACCGCCTCCGTTGTTCAGGAAACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | AACGGAGGCGGTACCTTCAAGTGCTTGGTGACATTATaGAGGTTCAGGACATACAGAGTTAGATCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NGGGTFKCLVTL*RFRTYRVRSPS Trigger: GGAAGGAGATCTAACTCTGTATGTCCTGAACCTCCATAATGTCACCAAGCACTTGAAGGTACCGCCTCCGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CAA 72 bp | GGTTTCCTGAACAACGGAGGCGGTACCTTCAAGTGCTaGGTGACATTATGGAGGTTCAGGACATACAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: GFLNNGGGTFKC*VTLWRFRTYRV Trigger: AACTCTGTATGTCCTGAACCTCCATAATGTCACCAAGCACTTGAAGGTACCGCCTCCGTTGTTCAGGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CAA 90 bp | GTATCCACTGGTTTCCTGAACAACGGAGGCGGTACCTTCAAGTGCTaGGTGACATTATGGAGGTTCAGGACATACAGAGTTAGATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSTGFLNNGGGTFKC*VTLWRFRTYRVRSP Trigger: AGGAGATCTAACTCTGTATGTCCTGAACCTCCATAATGTCACCAAGCACTTGAAGGTACCGCCTCCGTTGTTCAGGAAACCAGTGGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 72 bp | AAGTCTTCTCCTAACTGCAACCCATCGATGAGAATGTaGGCTTTCTTCCAGAAACTGTTGGGCTCATTGCCC | + |
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Preference number: 6 (lower is better) Translates to: KSSPNCNPSMRM*AFFQKLLGSLP Trigger: GGGCAATGAGCCCAACAGTTTCTGGAAGAAAGCTCACATTCTCATCGATGGGTTGCAGTTAGGAGAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 72 bp | CTCTTGACAGTAACACCCTGGGACCTACCAGTTTCTTaGACAGAAGAGAGAGCCAGTAATCAGGTAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLTVTPWDLPVS*TEERASNQVKA Trigger: AGCCTTTACCTGATTACTGGCTCTCTCTTCTGTTCAAGAAACTGGTAGGTCCCAGGGTGTTACTGTCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 72 bp | GCTGGCAGGGTCTGCTCATCCACCATCTTCAGAATTTaGCCGTTCAGTTGGACAGATTTGGAAAGTAATCCA | + |
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Preference number: 6 (lower is better) Translates to: AGRVCSSTIFRI*PFSWTDLESNP Trigger: TGGATTACTTTCCAAATCTGTCCAACTGAACGGTCAAATTCTGAAGATGGTGGATGAGCAGACCCTGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS GCA 72 bp | GAATGTGAGCTTTCTTCCAGAAACTGTTGGGCTCATTaGCCAGTTCCCAGGAGATGTTATAACCCTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ECELSSRNCWAH*PVPRRCYNPWK Trigger: CTTCCAAGGGTTATAACATCTCCTGGGAACTGGGCAATGAGCCCAACAGTTTCTGGAAGAAAGCTCACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS GCA 72 bp | GTAAAGGCTCAAAGTTTTCATCCACTAAGTGGTAGTTaGCTGCTCCGAAGAACACCTGCCTCATCACGACTT | + |
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Preference number: 6 (lower is better) Translates to: VKAQSFHPLSGS*LLRRTPASSRL Trigger: AAGTCGTGATGAGGCAGGTGTTCTTCGGAGCAGGCAACTACCACTTAGTGGATGAAAACTTTGAGCCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | CATTTAGACCAAAGATCAGGTCTAACCCCGAGCACTTaGCAAAACTGTAGAGCATGTCCACTGAGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HLDQRSGLTPST*QNCRACPLSFL Trigger: CAAGAAGCTCAGTGGACATGCTCTACAGTTTTGCCAAGTGCTCGGGGTTAGACCTGATCTTTGGTCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CCA 72 bp | CCATCTTCAGAATTTGACCGTTCAGTTGGACAGATTTaGAAAGTAATCCATCCGGCCCCGAAGGCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PSSEFDRSVGQI*KVIHPAPKASE Trigger: TTCTGAAGCCTTCGGGGCCGGATGGATTACTTTCCAAATCTGTCCAACTGAACGGTCAAATTCTGAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045617.15 |
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| CDS TCA 72 bp | CAGCAGAGACCGGCTCAGACCTGCAAATATCATGGTTaGCTTGAGATTTCCAGTAACTTCTTTCTTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QQRPAQTCKYHG*LEISSNFFLRK Trigger: CTTCCGAAGAAAGAAGTTACTGGAAATCTCAAGTCAACCATGATATTTGCAGGTCTGAGCCGGTCTCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS TCA 72 bp | ACTCCACAAAGTCTTCTCCTAACTGCAACCCATCGATaGGAATGTGAGCTTTCTTCCAGAAACTGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TPQSLLLTATHR*ECELSSRNCWA Trigger: AGCCCAACAGTTTCTGGAAGAAAGCTCACATTCTCATCGATGGGTTGCAGTTAGGAGAAGACTTTGTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CAA 72 bp | AGAGACCGGCTCAGACCTGCAAATATCATGGTTGACTaGAGATTTCCAGTAACTTCTTTCTTCGGAAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RDRLRPANIMVD*RFPVTSFFGSR Trigger: CCGACTTCCGAAGAAAGAAGTTACTGGAAATCTCAAGTCAACCATGATATTTGCAGGTCTGAGCCGGTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS CAA 90 bp | GACCTTCTTGCCAGGTGTGATCTCTTTAGTGACCTTCAGAATTTTTaGCACAGAGAGAATAAAAGTGTCCAGCACATCAGAGCTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DLLARCDLFSDLQNF*HRENKSVQHIRAQK Trigger: TTTCTGAGCTCTGATGTGCTGGACACTTTTATTCTCTCTGTGCAAAAAATTCTGAAGGTCACTAAAGAGATCACACCTGGCAAGAAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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| CDS GCA 72 bp | TTTGCATTTTGGAAAGCTGACCTTTGTAGAAGTTTATaGAACTCCACAAAGTCTTCTCCTAACTGCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: FAFWKADLCRSL*NSTKSSPNCNP Trigger: TGGGTTGCAGTTAGGAGAAGACTTTGTGGAGTTGCATAAACTTCTACAAAGGTCAGCTTTCCAAAATGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045617.15 ENSMUST00000112908.2 |
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