Pregenerated sensors for HPS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074811Ensembl transcript IDs: ENSMUST00000099393.4
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TTGGTATTTGCATGTATTTTAAAAATTGTTCCACAACAGACAGTATaGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACC | + |
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Preference number: 2 (lower is better) Translates to: LVFACILKIVPQQTV*HTQVPPSCFITLGT Trigger: GGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTTTAAAATACATGCAAATACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| 3UTR GCA 72 bp | CAACAGACAGTATTGCACACACAAGTCCCACCTTCGTaGTTCATAACCCTAGGTACCCTTCCCTTCGCATCT | + |
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Preference number: 3 (lower is better) Translates to: QQTVLHTQVPPS*FITLGTLPFAS Trigger: AGATGCGAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCGGGTGCAGCCTAGTTTaGTGCCAGCCTCCCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFGCSLV*CQPPRW Trigger: CCAGCGGGGAGGCTGGCACCAAACTAGGCTGCACCC...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | ATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTATGGAGGCCAGGGCCTaGGGTGCCCGAAACATGCTG | + |
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Preference number: 4 (lower is better) Translates to: IAHTSPTFVLHNPRYPSLMEARA*GARNML Trigger: CAGCATGTTTCGGGCACCTCAGGCCCTGGCCTCCAT...AAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCTGGTCTCCTGTCAACTaGGTTCTCAGCAGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFWSPVN*VLSRRA Trigger: GGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCA...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTTGGAGCTGCAGTGCCTaGAGGGTGGCACCCCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: IAHTSPTFVLHNPRYPSLWSCSA*RVAPQA Trigger: AGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCA...AAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCCCTGCCACTCCTATCTaGCTGGAGCTGCAGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFPATPI*LELQCL Trigger: CAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGG...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | GACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTCTTCCTCGTTCTTCATaGCCGGGGCTGGAGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: DSIAHTSPTFVLHNPRYPLPRSS*PGLEAP Trigger: TGGAGCCTCCAGCCCCGGGCATGAAGAACGAGGAAG...AGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGCCATACATCCGGGGGTaGTTGGGACCTCAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TTDSIAHTSPTFVLHNPRPYIRG*LGPQPA Trigger: GGCAGGCTGAGGTCCCAAGCACCCCCGGATGTATGG...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCGCCACCCTGCTGCTGTaGCAGTTTCACAAATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFATLLL*QFHKWG Trigger: CCCCCATTTGTGAAACTGGCACAGCAGCAGGGTGGC...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCAACTCCCACATCAGCTaGACCGAGCCCTTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFNSHIS*TEPLSR Trigger: CCTGGACAAGGGCTCGGTGCAGCTGATGTGGGAGTT...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACTTCGAAGCAGGGGGCTaGAGGCATCCAGGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CSTTDSIAHTSPTFVLHNFEAGG*RHPGPA Trigger: GGCTGGCCCTGGATGCCTCCAGCCCCCTGCTTCGAA...GTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACAGTGGGTCCACGAGGTaGTGTAGGGGGTGGAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYSGSTR*CRGWSA Trigger: GGCACTCCACCCCCTACACCACCTCGTGGACCCACT...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACAGCTGGCCCAGGCACTaGCACAGGAGTTCAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYSWPRH*HRSSKG Trigger: GCCCTTTGAACTCCTGTGTCAGTGCCTGGGCCAGCT...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCAGACGGCCTTCCTTaGGCCCCAGTCTGTTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYPDGLP*APVCSS Trigger: GCTAGAACAGACTGGGGCTCAAGGAAGGCCGTCTGG...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | GACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTGCAGCCTAGTTTGGTaGCAGCCTCCCCGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: DSIAHTSPTFVLHNPRYPCSLVW*QPPRWF Trigger: AAACCAGCGGGGAGGCTGGCACCAAACTAGGCTGCA...AGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCAGCAACAACAAGCCCTaGGAAGATGGGGCCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFSNNKP*EDGAQV Trigger: CACTTGGGCCCCATCTTCGCAGGGCTTGTTGTTGCT...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | ATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAGCATCCAGGCGGCGGTaGTGGGCAAACTCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: IVPQQTVLHTQVPPSCFIASRRR*WANSAS Trigger: GCTGGCAGAGTTTGCCCAGCACCGCCGCCTGGATGC...TATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTAATAGCAGCAAGTaGCGGCCGTCAGGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSLNSSK*RPSGLQ Trigger: CTGCAGCCCTGACGGCCGCCACTTGCTGCTATTAAG...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | GACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTAGTGTGTACAGCCAGTaGCTCCCTGGGGGACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: DSIAHTSPTFVLHNPRYPSVYSQ*LPGGQE Trigger: TTCCTGTCCCCCAGGGAGCCACTGGCTGTACACACT...AGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGCCACTCCTATCTGGCTaGAGCTGCAGTGCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TTDSIAHTSPTFVLHNPRPLLSG*SCSAWR Trigger: CCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGG...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCTGCCAGTTTCACAAATaGGGGGAGCCACTGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFCQFHK*GEPLRL Trigger: GAGCCTCAGTGGCTCCCCCCATTTGTGAAACTGGCA...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCACAGCTCAGTGCTCTaGAGTAGCTTCCATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSHSSVL*SSFHPG Trigger: GCCTGGATGGAAGCTACTTCAGAGCACTGAGCTGTG...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGGTGGCTGAAGGCCGTTaGAAGCTGCTCTGGTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TTDSIAHTSPTFVLHNPRVAEGR*KLLWLV Trigger: GACCAACCAGAGCAGCTTTCAACGGCCTTCAGCCAC...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | GACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTCCAGGAAGAGGTCCTTaGGGGAGGCTATCAGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: DSIAHTSPTFVLHNPRYPPGRGP*GRLSVQ Trigger: TTGGACTGATAGCCTCCCGCAAGGACCTCTTCCTGG...AGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCGTACCACCATGGCACTaGACTAGGCTCACCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSVPPWH*TRLTFP Trigger: AGGGAAGGTGAGCCTAGTGCAGTGCCATGGTGGTAC...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGGGTGGCACCCCAAGCTaGTGTAGGAAGGGCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TTDSIAHTSPTFVLHNPRGGTPS*CRKGLE Trigger: TTCCAAGCCCTTCCTACAGCAGCTTGGGGTGCCACC...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCAGCCGGGGCCACCCTaGTGCTGTGCCAGTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFQPGPP*CCASFT Trigger: TGTGAAACTGGCACAGCAGCAGGGTGGCCCCGGCTG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCTGGTGTAGCAGGATGTaGGTGCAGCCTAGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFWCSRM*VQPSLV Trigger: CACCAAACTAGGCTGCACCCACATCCTGCTACACCA...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCAAGCCCTGCGAAGATaGGGCCCAAGTGTGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYQALRR*GPSVYS Trigger: GCTGTACACACTTGGGCCCCATCTTCGCAGGGCTTG...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCCAGTAGTTCCAAGGTaGAGCCCAGGACACAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: IAHTSPTFVLHNPRYPSLPVVPR*SPGHRL Trigger: TAGCCTGTGTCCTGGGCTCCACCTTGGAACTACTGG...AAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | AAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATGCTTGGGCTCCAGATaGGCAGAAGGTGGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: KLFHNRQYCTHKSHLRASCLGSR*AEGGPH Trigger: GTGTGGCCCACCTTCTGCTCATCTGGAGCCCAAGCA...TGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | TGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCACCAGGTCCTTGTCTaGAGGCAGCTCAAGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CSTTDSIAHTSPTFVLHNHQVLV*RQLKAL Trigger: CAAGGCCTTGAGCTGCCTTCAGACAAGGACCTGGTG...GTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR TCA 90 bp | ATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCCACCAGCTGGGCCTTaGGCTGTTCTATACTACGAT | + |
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Preference number: 4 (lower is better) Translates to: IAHTSPTFVLHNPRYPSLPPAGP*AVLYYD Trigger: ATCGTAGTATAGAACAGCTCAAGGCCCAGCTGGTGG...AAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCAGATGTCCTCATAGGTaGTTTGAACTGGGCCAGACG | + |
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Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFRCPHR*FELGQT Trigger: CGTCTGGCCCAGTTCAAAGCACCTATGAGGACATCT...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCAGCCAGTGGCTCCCTaGGGGACAGGAATCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFQPVAP*GTGIQE Trigger: TTCCTGGATTCCTGTCCCCCAGGGAGCCACTGGCTG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCGTGTCTCAGTTCTTCTaGGGTAAGCTGGGTACCTCG | + |
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Preference number: 4 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSVSQFF*GKLGTS Trigger: CGAGGTACCCAGCTTACCCCAGAAGAACTGAGACAC...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTCCCCAGCCACCAGCTaGGCCTTGAGCTGTTCTATA | + |
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Preference number: 4 (lower is better) Translates to: TTDSIAHTSPTFVLHNPRSPATS*ALSCSI Trigger: TATAGAACAGCTCAAGGCCCAGCTGGTGGCTGGGGA...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCAACAGCCGCCCACTaGTCATGTCCAGTAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CSTTDSIAHTSPTFVLHNPTAAH*SCPVVP Trigger: TGGAACTACTGGACATGAGCAGTGGGCGGCTGTTGG...GTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCTTGGGACCTCAGCCTaGCACTCCTATCTGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFLGTSA*HSYLAG Trigger: TCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR GCA 90 bp | AAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCACCGGGGCCACCCTGCTaGTGTGCCAGTTTCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: KLFHNRQYCTHKSHLRASPGPPC*CASFTN Trigger: ATTTGTGAAACTGGCACAGCAGCAGGGTGGCCCCGG...TGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCTTCATGCCCGGGGCTaGAGGCTCCAGCAAATGTAC | + |
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Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFLHARG*RLQQMY Trigger: GTACATTTGCTGGAGCCTCCAGCCCCGGGCATGAAG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCAGATGAGCAGAAGGTaGGCCACACCAGACCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFQMSRR*ATPDQV Trigger: CACTTGGTCTGGTGTGGCCCACCTTCTGCTCATCTG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | ATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAGGCAGCTCAAGGCCTTaGGGAGTTTCCCAACACACA | + |
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Preference number: 4 (lower is better) Translates to: IVPQQTVLHTQVPPSCFIGSSRP*GVSQHT Trigger: TGTGTGTTGGGAAACTCCCCAAGGCCTTGAGCTGCC...TATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCTCTTCTGGGGTAAGCTaGGTACCTCGAAGGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFSSGVS*VPRRLR Trigger: TCGGAGCCTTCGAGGTACCCAGCTTACCCCAGAAGA...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | GACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTAAAATGGTGTTGAATTaGGCCAGCTGGTCTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: DSIAHTSPTFVLHNPRYPKMVLN*ASWSPV Trigger: GACAGGAGACCAGCTGGCCCAATTCAACACCATTTT...AGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CCA 90 bp | TGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACGGTTCCCTCATCATCTaGGAGATGTGTCCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSTTDSIAHTSPTFVLHNGSLII*EMCPQQ Trigger: CTGCTGAGGACACATCTCCCAGATGATGAGGGAACC...GTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCGCTCAGGGAAAGGGGTaGTTCCCTCATCATCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFAQGKG*FPHHLG Trigger: TCCCAGATGATGAGGGAACCACCCCTTTCCCTGAGC...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR GCA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGGAGGTGCCCGAAACATaGTGTTGTGTCTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTDSIAHTSPTFVLHNPREVPET*CCVSVL Trigger: AAGAACTGAGACACAACAGCATGTTTCGGGCACCTC...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR GCA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCTCTTTCTTTATCAGCTaGCTTACAGCTTGTAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LHTQVPPSCFITLGTLPFSFFIS*LTACST Trigger: CGTGCTACAAGCTGTAAGGCAGCTGATAAAGAAAGA...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCCAAAAAGGGGGCAATaGTGTAGCAGGATGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFPKRGQ*CSRMWV Trigger: CACCCACATCCTGCTACACCATTGCCCCCTTTTTGG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CCA 90 bp | ATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATATACCTTCCCCTTGCTTaGGCTCCAGATGAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPQQTVLHTQVPPSCFIYLPLA*APDEQK Trigger: CTTCTGCTCATCTGGAGCCCAAGCAAGGGGAAGGTA...TATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR GCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCGTGCTGGGCAAACTCTaGCAGCAGCAGCTTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFVLGKL*QQQLKD Trigger: ATCTTTAAGCTGCTGCTGGCAGAGTTTGCCCAGCAC...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR TCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCCAGGCTTTTACTGTGTaGAAGACCAAGAGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFQAFTV*KTKRWS Trigger: GCTCCATCTCTTGGTCTTTCACACAGTAAAAGCCTG...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CCA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCGCTGTAGGAAGGGCTTaGAAAATGGTGTTGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFAVGRA*KMVLNW Trigger: CCAATTCAACACCATTTTCCAAGCCCTTCCTACAGC...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS TCA 90 bp | CAGCTGGGTCCCCCGCCAACAACTCGCGGAGCCGGGCCGCGCCGGTaGAGTTGCTCAGATCCGAAAGCAGGCGCAGAGTTCCTGCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLGPPPTTRGAGPRR*SCSDPKAGAEFLHA Trigger: AGCGTGCAGGAACTCTGCGCCTGCTTTCGGATCTGAGCAACTTCACCGGCGCGGCCCGGCTCCGCGAGTTGTTGGCGGGGGACCCAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS GCA 90 bp | CGGCCACGGCCATCACGCGGGCTCCACCATCCGGACACAGCTCAGTaGTCTGAAGTAGCTTCCATCCAGGCTCCATCCCCACGCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPRPSRGLHHPDTAQ*SEVASIQAPSPRPK Trigger: TTTGGGGCGTGGGGATGGAGCCTGGATGGAAGCTACTTCAGAGCACTGAGCTGTGTCCGGATGGTGGAGCCCGCGTGATGGCCGTGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS GCA 90 bp | AGCTGGTCTCCTGTCAACTGGGTTCTCAGCAGGCGGGCCACCTCGTaGTCCGCTAACTCAGTCCAGCCAGCCTCCTCATCGTCCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWSPVNWVLSRRATS*SANSVQPASSSSPA Trigger: GGCTGGGGACGATGAGGAGGCTGGCTGGACTGAGTTAGCGGAGCACGAGGTGGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | AGCCCTGCGAAGATGGGGCCCAAGTGTGTACAGCCAGTGGCTCCCTaGGGGACAGGAATCCAGGAAGGCCTCGCAGCAGGGTCCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPAKMGPKCVQPVAP*GTGIQEGLAAGSGS Trigger: ACTTCCGGACCCTGCTGCGAGGCCTTCCTGGATTCCTGTCCCCCAGGGAGCCACTGGCTGTACACACTTGGGCCCCATCTTCGCAGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | ACATCCGGGGGTGCTTGGGACCTCAGCCTGCCACTCCTATCTGGCTaGAGCTGCAGTGCCTGGAGGGTGGCACCCCAAGCTGCTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSGGAWDLSLPLLSG*SCSAWRVAPQAAVG Trigger: TCCTACAGCAGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACCCCCGGATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | CCATACATCCGGGGGTGCTTGGGACCTCAGCCTGCCACTCCTATCTaGCTGGAGCTGCAGTGCCTGGAGGGTGGCACCCCAAGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PYIRGCLGPQPATPI*LELQCLEGGTPSCC Trigger: ACAGCAGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACCCCCGGATGTATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS TCA 90 bp | CTGAAGGCCGTTGAAAGCTGCTCTGGTTGGTCCTTAACACCCGGCTaGCGCTCCTCGCACCAAACTAGGCGGCCTCGGGTTGCGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LKAVESCSGWSLTPG*RSSHQTRRPRVAAT Trigger: CGTGGCCGCAACCCGAGGCCGCCTAGTTTGGTGCGAGGAGCGTCAGCCGGGTGTTAAGGACCAACCAGAGCAGCTTTCAACGGCCTTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | CAACAACAAGCCCTGCGAAGATGGGGCCCAAGTGTGTACAGCCAGTaGCTCCCTGGGGGACAGGAATCCAGGAAGGCCTCGCAGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QQQALRRWGPSVYSQ*LPGGQESRKASQQG Trigger: ACCCTGCTGCGAGGCCTTCCTGGATTCCTGTCCCCCAGGGAGCCACTGGCTGTACACACTTGGGCCCCATCTTCGCAGGGCTTGTTGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS GCA 90 bp | TTAGGACCTTCTTCCATACATCCGGGGGTGCTTGGGACCTCAGCCTaGCACTCCTATCTGGCTGGAGCTGCAGTGCCTGGAGGGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGPSSIHPGVLGTSA*HSYLAGAAVPGGWH Trigger: GTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACCCCCGGATGTATGGAAGAAGGTCCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | GCTGTTGGAGCCCTTAGGACCTTCTTCCATACATCCGGGGGTGCTTaGGACCTCAGCCTGCCACTCCTATCTGGCTGGAGCTGCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGALRTFFHTSGGA*DLSLPLLSGWSCSA Trigger: GGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACCCCCGGATGTATGGAAGAAGGTCCTAAGGGCTCCAACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | TTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTCCTAGGCGGCCTCGGGTaGCGGCCACGGCCATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LHTQVPPSCFITLGTLPFLGGLG*RPRPSR Trigger: GCGTGATGGCCGTGGCCGCAACCCGAGGCCGCCTAG...GAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS GCA 90 bp | CCTATCTGGCTGGAGCTGCAGTGCCTGGAGGGTGGCACCCCAAGCTaGTGTAGGAAGGGCTTGGAAAATGGTGTTGAATTGGGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PIWLELQCLEGGTPS*CRKGLENGVELGQL Trigger: CAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | CAGGGCCTGAGGTGCCCGAAACATGCTGTTGTGTCTCAGTTCTTCTaGGGTAAGCTGGGTACCTCGAAGGCTCCGACGCTGGTAGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: QGLRCPKHAVVSQFF*GKLGTSKAPTLVVP Trigger: GGGTACTACCAGCGTCGGAGCCTTCGAGGTACCCAGCTTACCCCAGAAGAACTGAGACACAACAGCATGTTTCGGGCACCTCAGGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | GCTGCTGTAGGAAGGGCTTGGAAAATGGTGTTGAATTGGGCCAGCTaGTCTCCTGTCAACTGGGTTCTCAGCAGGCGGGCCACCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAVGRAWKMVLNWAS*SPVNWVLSRRATSC Trigger: GCACGAGGTGGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | GCACCCCAAGCTGCTGTAGGAAGGGCTTGGAAAATGGTGTTGAATTaGGCCAGCTGGTCTCCTGTCAACTGGGTTCTCAGCAGGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: APQAAVGRAWKMVLN*ASWSPVNWVLSRRA Trigger: GGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 90 bp | GCTCACCTTCCCTTTCAAGTCAAGCAACAACAAGCCCTGCGAAGATaGGGCCCAAGTGTGTACAGCCAGTGGCTCCCTGGGGGACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AHLPFQVKQQQALRR*GPSVYSQWLPGGQE Trigger: TTCCTGTCCCCCAGGGAGCCACTGGCTGTACACACTTGGGCCCCATCTTCGCAGGGCTTGTTGTTGCTTGACTTGAAAGGGAAGGTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 90 bp | GCTTGGAAAATGGTGTTGAATTGGGCCAGCTGGTCTCCTGTCAACTaGGTTCTCAGCAGGCGGGCCACCTCGTGCTCCGCTAACTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AWKMVLNWASWSPVN*VLSRRATSCSANSV Trigger: GACTGAGTTAGCGGAGCACGAGGTGGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 90 bp | AGCCCGGCTTCCAGAGCCCGTTCCCACTCTTCTTTCTTTATCAGCTaGCTTACAGCTTGTAGCACGGCTTTGGGTCGCCCACTGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPASRARSHSSFFIS*LTACSTALGRPLPK Trigger: TTTGGGCAGTGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGCAGCTGATAAAGAAAGAAGAGTGGGAACGGGCTCTGGAAGCCGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 90 bp | TTATCAGCTGCCTTACAGCTTGTAGCACGGCTTTGGGTCGCCCACTaGCCAAAAGCAACTCGAGTTCCAGAGCCTCAGGCCTCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSAALQLVARLWVAH*PKATRVPEPQASSL Trigger: AAGGGAAGAGGCCTGAGGCTCTGGAACTCGAGTTGCTTTTGGGCAGTGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGCAGCTGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 90 bp | GCAACTATTACCTTCCCCTTGCTTGGGCTCCAGATGAGCAGAAGGTaGGCCACACCAGACCAAGTGTTGGTAGTAGGCACCAGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATITFPLLGLQMSRR*ATPDQVLVVGTRKR Trigger: CCTCTTCCTGGTGCCTACTACCAACACTTGGTCTGGTGTGGCCCACCTTCTGCTCATCTGGAGCCCAAGCAAGGGGAAGGTAATAGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 90 bp | GGCTCCTCGGGTCTCCAGCTCTTCCTCGTTCTTCATGCCCGGGGCTaGAGGCTCCAGCAAATGTACTCTGTCTGTACTGAGAACCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSGLQLFLVLHARG*RLQQMYSVCTENLF Trigger: AAAAAGGTTCTCAGTACAGACAGAGTACATTTGCTGGAGCCTCCAGCCCCGGGCATGAAGAACGAGGAAGAGCTGGAGACCCGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CAA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCTACATCCGGGGGTGCTaGGGACCTCAGCCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSYIRGC*GPQPAT Trigger: AGTGGCAGGCTGAGGTCCCAAGCACCCCCGGATGTA...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS-3UTR CAA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACAGCTGCACCGAGCCCTaGTCCAGGTGGTACCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYSCTEP*SRWYPG Trigger: GCCTGGGTACCACCTGGACAAGGGCTCGGTGCAGCT...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS TCA 90 bp | ACGCTGGTAGTACCCACAGGCCTCCTCAAACACCAGGTCCTTGTCTaGAGGCAGCTCAAGGCCTTGGGGAGTTTCCCAACACACACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLVVPTGLLKHQVLV*RQLKALGSFPTHTK Trigger: TTTTGTGTGTGTTGGGAAACTCCCCAAGGCCTTGAGCTGCCTTCAGACAAGGACCTGGTGTTTGAGGAGGCCTGTGGGTACTACCAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS GCA 90 bp | TCATGTCCAGTAGTTCCAAGGTGGAGCCCAGGACACAGGCTAAAGTaGCGTGAAATGTCCCCAGGGCTGCAGACCCTTTTAGGCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SCPVVPRWSPGHRLK*REMSPGLQTLLGLQ Trigger: CTGTAAGCCTAAAAGGGTCTGCAGCCCTGGGGACATTTCACGGCACTTTAGCCTGTGTCCTGGGCTCCACCTTGGAACTACTGGACATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | GCCTCCTCAAACACCAGGTCCTTGTCTGAAGGCAGCTCAAGGCCTTaGGGAGTTTCCCAACACACACAAAAGAGACCCAAGGCTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSNTRSLSEGSSRP*GVSQHTQKRPKAES Trigger: GCTTTCAGCCTTGGGTCTCTTTTGTGTGTGTTGGGAAACTCCCCAAGGCCTTGAGCTGCCTTCAGACAAGGACCTGGTGTTTGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS CCA 90 bp | ACTCTTCTTTCTTTATCAGCTGCCTTACAGCTTGTAGCACGGCTTTaGGTCGCCCACTGCCCAAAAGCAACTCGAGTTCCAGAGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLSLSAALQLVARL*VAHCPKATRVPEPQ Trigger: CTGAGGCTCTGGAACTCGAGTTGCTTTTGGGCAGTGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGCAGCTGATAAAGAAAGAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | AAAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCGCCGCGCCGGTGAAGTaGCTCAGATCCGAAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KIVPQQTVLHTQVPPSCFAAPVK*LRSESR Trigger: CCTGCTTTCGGATCTGAGCAACTTCACCGGCGCGGC...GAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCTCAAACACCAGGTCCTaGTCTGAAGGCAGCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSSNTRS*SEGSSR Trigger: CCTTGAGCTGCCTTCAGACAAGGACCTGGTGTTTGA...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | ATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCCTTGCCCGAAACATGCTGTaGTGTCTCAGTTCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IAHTSPTFVLHNPRYPSLARNML*CLSSSG Trigger: CCCAGAAGAACTGAGACACAACAGCATGTTTCGGGC...AAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACGCCACCAGCTGGGCCTaGAGCTGTTCTATACTACGA | + |
|
Preference number: 5 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYATSWA*SCSILR Trigger: TCGTAGTATAGAACAGCTCAAGGCCCAGCTGGTGGC...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | AGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACCCTTCCGGCGGCAGTATTCCATaGGGATGTTCCTTTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIAHTSPTFVLHNPRYPSGGSIP*GCSFPA Trigger: AGCTGGAAAGGAACATCCCAATGGAATACTGCCGCC...GGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | ACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGACACCAGACCAAGTGTaGGTAGTAGGCACCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTDSIAHTSPTFVLHNPRTPDQV*VVGTRK Trigger: CTTCCTGGTGCCTACTACCAACACTTGGTCTGGTGT...CCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAACCCTAGGTACACTATTACCTTCCCCTaGCTTGGGCTCCAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSIAHTSPTFVLHNPRYTITFP*LGLQMS Trigger: GCTCATCTGGAGCCCAAGCAAGGGGAAGGTAATAGT...GTACCTAGGGTTATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATAAGGCAGCTCAAGGCCTaGGGGAGTTTCCCAACACAC | + |
|
Preference number: 5 (lower is better) Translates to: IVPQQTVLHTQVPPSCFIRQLKA*GSFPTH Trigger: GTGTGTTGGGAAACTCCCCAAGGCCTTGAGCTGCCT...TATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | AAATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCAGTCCTCATAGGTGCTTaGAACTGGGCCAGACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLFHNRQYCTHKSHLRASVLIGA*NWARRP Trigger: AGGCCGTCTGGCCCAGTTCAAAGCACCTATGAGGAC...TGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTTCCACAACAGACAGTATTGCACACACAAGTCCCACCTTCGTGCTTCATATGCTGTAGGAAGGGCTaGGAAAATGGTGTTGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: IVPQQTVLHTQVPPSCFICCRKG*ENGVEL Trigger: CAATTCAACACCATTTTCCAAGCCCTTCCTACAGCA...TATGAAGCACGAAGGTGGGACTTGTGTGTGCAATACTGTCTGTTGTGGAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
||
| CDS TCA 72 bp | CCCCCGCCAACAACTCGCGGAGCCGGGCCGCGCCGGTaGAGTTGCTCAGATCCGAAAGCAGGCGCAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPPTTRGAGPRR*SCSDPKAGAEF Trigger: GAACTCTGCGCCTGCTTTCGGATCTGAGCAACTTCACCGGCGCGGCCCGGCTCCGCGAGTTGTTGGCGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | CGGGGGTGCTTGGGACCTCAGCCTGCCACTCCTATCTaGCTGGAGCTGCAGTGCCTGGAGGGTGGCACCCCA | + |
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Preference number: 6 (lower is better) Translates to: RGCLGPQPATPI*LELQCLEGGTP Trigger: TGGGGTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACCCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | GGGGTCTTAATAGCAGCAAGTGGCGGCCGTCAGGGCTaGAGCGGACTAGGACAGCTGGGTCCCCCGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: GVLIAASGGRQG*SGLGQLGPPPT Trigger: TGTTGGCGGGGGACCCAGCTGTCCTAGTCCGCTGCAGCCCTGACGGCCGCCACTTGCTGCTATTAAGACCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | GCCCTGCGAAGATGGGGCCCAAGTGTGTACAGCCAGTaGCTCCCTGGGGGACAGGAATCCAGGAAGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ALRRWGPSVYSQ*LPGGQESRKAS Trigger: CGAGGCCTTCCTGGATTCCTGTCCCCCAGGGAGCCACTGGCTGTACACACTTGGGCCCCATCTTCGCAGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | GGTGCTTGGGACCTCAGCCTGCCACTCCTATCTGGCTaGAGCTGCAGTGCCTGGAGGGTGGCACCCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GAWDLSLPLLSG*SCSAWRVAPQA Trigger: AGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | GCCAACAACTCGCGGAGCCGGGCCGCGCCGGTGAAGTaGCTCAGATCCGAAAGCAGGCGCAGAGTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ANNSRSRAAPVK*LRSESRRRVPA Trigger: TGCAGGAACTCTGCGCCTGCTTTCGGATCTGAGCAACTTCACCGGCGCGGCCCGGCTCCGCGAGTTGTTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | CCTGTCAACTGGGTTCTCAGCAGGCGGGCCACCTCGTaGTCCGCTAACTCAGTCCAGCCAGCCTCCTCATCG | + |
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Preference number: 6 (lower is better) Translates to: PVNWVLSRRATS*SANSVQPASSS Trigger: CGATGAGGAGGCTGGCTGGACTGAGTTAGCGGAGCACGAGGTGGCCCGCCTGCTGAGAACCCAGTTGACAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | TGGGACCTCAGCCTGCCACTCCTATCTGGCTGGAGCTaGAGTGCCTGGAGGGTGGCACCCCAAGCTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: WDLSLPLLSGWS*SAWRVAPQAAV Trigger: TACAGCAGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | AAGATGGGGCCCAAGTGTGTACAGCCAGTGGCTCCCTaGGGGACAGGAATCCAGGAAGGCCTCGCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KMGPKCVQPVAP*GTGIQEGLAAG Trigger: CCCTGCTGCGAGGCCTTCCTGGATTCCTGTCCCCCAGGGAGCCACTGGCTGTACACACTTGGGCCCCATCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | CCATCACGCGGGCTCCACCATCCGGACACAGCTCAGTaGTCTGAAGTAGCTTCCATCCAGGCTCCATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSRGLHHPDTAQ*SEVASIQAPSP Trigger: TGGGGATGGAGCCTGGATGGAAGCTACTTCAGAGCACTGAGCTGTGTCCGGATGGTGGAGCCCGCGTGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | TCTTCCATACATCCGGGGGTGCTTGGGACCTCAGCCTaGCACTCCTATCTGGCTGGAGCTGCAGTGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSIHPGVLGTSA*HSYLAGAAVPG Trigger: TCCAGGCACTGCAGCTCCAGCCAGATAGGAGTGGCAGGCTGAGGTCCCAAGCACCCCCGGATGTATGGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | ATGGTGTTGAATTGGGCCAGCTGGTCTCCTGTCAACTaGGTTCTCAGCAGGCGGGCCACCTCGTGCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: MVLNWASWSPVN*VLSRRATSCSA Trigger: AGCGGAGCACGAGGTGGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS TCA 72 bp | GTTGAAAGCTGCTCTGGTTGGTCCTTAACACCCGGCTaGCGCTCCTCGCACCAAACTAGGCGGCCTCGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VESCSGWSLTPG*RSSHQTRRPRV Trigger: AACCCGAGGCCGCCTAGTTTGGTGCGAGGAGCGTCAGCCGGGTGTTAAGGACCAACCAGAGCAGCTTTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | AGGGCTGCAGACCCTTTTAGGCTTACAGGGGCCTCCTaGAGGATTCCCACGGTTCGAGTACCACCATGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAADPFRLTGAS*RIPTVRVPPWH Trigger: GTGCCATGGTGGTACTCGAACCGTGGGAATCCTGCAGGAGGCCCCTGTAAGCCTAAAAGGGTCTGCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | GCCTTACAGCTTGTAGCACGGCTTTGGGTCGCCCACTaGCCAAAAGCAACTCGAGTTCCAGAGCCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALQLVARLWVAH*PKATRVPEPQA Trigger: GGCCTGAGGCTCTGGAACTCGAGTTGCTTTTGGGCAGTGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | CCTTGTCCAGGTGGTACCCAGGCTTCTTGTCCTGGATaGTCTGATGCCGGGAGAGAAGCAGTGGGTCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PCPGGTQASCPG*SDAGREAVGPR Trigger: TCGTGGACCCACTGCTTCTCTCCCGGCATCAGACCATCCAGGACAAGAAGCCTGGGTACCACCTGGACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | AGTTTGGTGCCAGCCTCCCCGCTGGTTTCCAGGGTCTaGAAGCACACACGGTGGCTGAAGGCCGTTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLVPASPLVSRV*KHTRWLKAVES Trigger: GCTTTCAACGGCCTTCAGCCACCGTGTGTGCTTCAAGACCCTGGAAACCAGCGGGGAGGCTGGCACCAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | GGCACCCCAAGCTGCTGTAGGAAGGGCTTGGAAAATGGTGTTGAATaGGGCCAGCTGGTCTCCTGTCAACTGGGTTCTCAGCAGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTPSCCRKGLENGVE*GQLVSCQLGSQQAG Trigger: GCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | CTTGGGCTCCAGATGAGCAGAAGGTGGGCCACACCAGACCAAGTGTaGGTAGTAGGCACCAGGAAGAGGTCCTTGCGGGAGGCTATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGLQMSRRWATPDQV*VVGTRKRSLREAIS Trigger: ACTGATAGCCTCCCGCAAGGACCTCTTCCTGGTGCCTACTACCAACACTTGGTCTGGTGTGGCCCACCTTCTGCTCATCTGGAGCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS TCA 72 bp | CAGCCTCCTCATCGTCCCCAGCCACCAGCTGGGCCTTaGGCTGTTCTATACTACGATAATCCCGGAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPPHRPQPPAGP*AVLYYDNPGAQ Trigger: CTGAGCTCCGGGATTATCGTAGTATAGAACAGCTCAAGGCCCAGCTGGTGGCTGGGGACGATGAGGAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | ACCTTCCCCTTGCTTGGGCTCCAGATGAGCAGAAGGTaGGCCACACCAGACCAAGTGTTGGTAGTAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TFPLLGLQMSRR*ATPDQVLVVGT Trigger: GGTGCCTACTACCAACACTTGGTCTGGTGTGGCCCACCTTCTGCTCATCTGGAGCCCAAGCAAGGGGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | CCCTTTCAAGTCAAGCAACAACAAGCCCTGCGAAGATaGGGCCCAAGTGTGTACAGCCAGTGGCTCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PFQVKQQQALRR*GPSVYSQWLPG Trigger: CCCAGGGAGCCACTGGCTGTACACACTTGGGCCCCATCTTCGCAGGGCTTGTTGTTGCTTGACTTGAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | GGAAGGGCTTGGAAAATGGTGTTGAATTGGGCCAGCTaGTCTCCTGTCAACTGGGTTCTCAGCAGGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRAWKMVLNWAS*SPVNWVLSRRA Trigger: GGCCCGCCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | CAGATGAGCAGAAGGTGGGCCACACCAGACCAAGTGTaGGTAGTAGGCACCAGGAAGAGGTCCTTGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QMSRRWATPDQV*VVGTRKRSLRE Trigger: CTCCCGCAAGGACCTCTTCCTGGTGCCTACTACCAACACTTGGTCTGGTGTGGCCCACCTTCTGCTCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | GCCACACCAGACCAAGTGTTGGTAGTAGGCACCAGGAAGAGGTCCTaGCGGGAGGCTATCAGTCCAAAAAGGGGGCAATGGTGTAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATPDQVLVVGTRKRS*REAISPKRGQWCSR Trigger: CCTGCTACACCATTGCCCCCTTTTTGGACTGATAGCCTCCCGCAAGGACCTCTTCCTGGTGCCTACTACCAACACTTGGTCTGGTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | AGGGTGGCACCCCAAGCTGCTGTAGGAAGGGCTTGGAAAATGGTGTaGAATTGGGCCAGCTGGTCTCCTGTCAACTGGGTTCTCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RVAPQAAVGRAWKMV*NWASWSPVNWVLSR Trigger: CCTGCTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGGTGCCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | CTGGAGCTGCAGTGCCTGGAGGGTGGCACCCCAAGCTaGTGTAGGAAGGGCTTGGAAAATGGTGTTGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: LELQCLEGGTPS*CRKGLENGVEL Trigger: CAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGGTGCCACCCTCCAGGCACTGCAGCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | ACAGCCGCCCACTGCTCATGTCCAGTAGTTCCAAGGTaGAGCCCAGGACACAGGCTAAAGTGCCGTGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: TAAHCSCPVVPR*SPGHRLKCREM Trigger: CATTTCACGGCACTTTAGCCTGTGTCCTGGGCTCCACCTTGGAACTACTGGACATGAGCAGTGGGCGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | GGTCTCCAGCTCTTCCTCGTTCTTCATGCCCGGGGCTaGAGGCTCCAGCAAATGTACTCTGTCTGTACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLQLFLVLHARG*RLQQMYSVCTE Trigger: CTCAGTACAGACAGAGTACATTTGCTGGAGCCTCCAGCCCCGGGCATGAAGAACGAGGAAGAGCTGGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | AGGTGCCCGAAACATGCTGTTGTGTCTCAGTTCTTCTaGGGTAAGCTGGGTACCTCGAAGGCTCCGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RCPKHAVVSQFF*GKLGTSKAPTL Trigger: CAGCGTCGGAGCCTTCGAGGTACCCAGCTTACCCCAGAAGAACTGAGACACAACAGCATGTTTCGGGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | TGGAGGGTGGCACCCCAAGCTGCTGTAGGAAGGGCTTaGAAAATGGTGTTGAATTGGGCCAGCTGGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WRVAPQAAVGRA*KMVLNWASWSP Trigger: AGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGGTGCCACCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | CTCACCTTCCCTTTCAAGTCAAGCAACAACAAGCCCTaGGAAGATGGGGCCCAAGTGTGTACAGCCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LTFPFKSSNNKP*EDGAQVCTASG Trigger: GCCACTGGCTGTACACACTTGGGCCCCATCTTCGCAGGGCTTGTTGTTGCTTGACTTGAAAGGGAAGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | TCCTTGCGGGAGGCTATCAGTCCAAAAAGGGGGCAATaGTGTAGCAGGATGTGGGTGCAGCCTAGTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLREAISPKRGQ*CSRMWVQPSLV Trigger: CACCAAACTAGGCTGCACCCACATCCTGCTACACCATTGCCCCCTTTTTGGACTGATAGCCTCCCGCAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | GACCAAGTGTTGGTAGTAGGCACCAGGAAGAGGTCCTaGCGGGAGGCTATCAGTCCAAAAAGGGGGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: DQVLVVGTRKRS*REAISPKRGQW Trigger: CCATTGCCCCCTTTTTGGACTGATAGCCTCCCGCAAGGACCTCTTCCTGGTGCCTACTACCAACACTTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | CTACAAATGAACTCCCACATCAGCTGCACCGAGCCCTaGTCCAGGTGGTACCCAGGCTTCTTGTCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LQMNSHISCTEP*SRWYPGFLSWM Trigger: CATCCAGGACAAGAAGCCTGGGTACCACCTGGACAAGGGCTCGGTGCAGCTGATGTGGGAGTTCATTTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | GTTCAAAGGGCGGCAGTATTCCATTGGGATGTTCCTTTCCAGCTGTaGGAGCCCTTAGGACCTTCTTCCATACATCCGGGGGTGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQRAAVFHWDVPFQL*EPLGPSSIHPGVLG Trigger: CCCAAGCACCCCCGGATGTATGGAAGAAGGTCCTAAGGGCTCCAACAGCTGGAAAGGAACATCCCAATGGAATACTGCCGCCCTTTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS GCA 72 bp | TCCAGAGCCCGTTCCCACTCTTCTTTCTTTATCAGCTaGCTTACAGCTTGTAGCACGGCTTTGGGTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRARSHSSFFIS*LTACSTALGRP Trigger: TGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGCAGCTGATAAAGAAAGAAGAGTGGGAACGGGCTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | AGACCAAGAGATGGAGCAGCAACTATTACCTTCCCCTaGCTTGGGCTCCAGATGAGCAGAAGGTGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RPRDGAATITFP*LGLQMSRRWAT Trigger: TGTGGCCCACCTTCTGCTCATCTGGAGCCCAAGCAAGGGGAAGGTAATAGTTGCTGCTCCATCTCTTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | CCCCAAGCTGCTGTAGGAAGGGCTTGGAAAATGGTGTaGAATTGGGCCAGCTGGTCTCCTGTCAACTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PQAAVGRAWKMV*NWASWSPVNWV Trigger: AACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | GCGGCAGTATTCCATTGGGATGTTCCTTTCCAGCTGTaGGAGCCCTTAGGACCTTCTTCCATACATCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAVFHWDVPFQL*EPLGPSSIHPG Trigger: CCCCGGATGTATGGAAGAAGGTCCTAAGGGCTCCAACAGCTGGAAAGGAACATCCCAATGGAATACTGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | CTGTGTGAAAGACCAAGAGATGGAGCAGCAACTATTACCTTCCCCTaGCTTGGGCTCCAGATGAGCAGAAGGTGGGCCACACCAGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LCERPRDGAATITFP*LGLQMSRRWATPDQ Trigger: TTGGTCTGGTGTGGCCCACCTTCTGCTCATCTGGAGCCCAAGCAAGGGGAAGGTAATAGTTGCTGCTCCATCTCTTGGTCTTTCACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CCA 72 bp | TCTTTATCAGCTGCCTTACAGCTTGTAGCACGGCTTTaGGTCGCCCACTGCCCAAAAGCAACTCGAGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSAALQLVARL*VAHCPKATRVP Trigger: TGGAACTCGAGTTGCTTTTGGGCAGTGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGCAGCTGATAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | CGCAGCAGGGTCCGGAAGTCCCAAGTGTCCCCTTGTTaGGGATTCAGGCTTTTACTGTGTGAAAGACCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSRVRKSQVSPC*GFRLLLCERPR Trigger: TCTTGGTCTTTCACACAGTAAAAGCCTGAATCCCAAACAAGGGGACACTTGGGACTTCCGGACCCTGCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 72 bp | AGCTGCTGTAGGAAGGGCTTGGAAAATGGTGTTGAATaGGGCCAGCTGGTCTCCTGTCAACTGGGTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCCRKGLENGVE*GQLVSCQLGSQ Trigger: CTGAGAACCCAGTTGACAGGAGACCAGCTGGCCCAATTCAACACCATTTTCCAAGCCCTTCCTACAGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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| CDS CAA 90 bp | CACTCTTCTTTCTTTATCAGCTGCCTTACAGCTTGTAGCACGGCTTaGGGTCGCCCACTGCCCAAAAGCAACTCGAGTTCCAGAGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSSFFISCLTACSTA*GRPLPKSNSSSRAS Trigger: TGAGGCTCTGGAACTCGAGTTGCTTTTGGGCAGTGGGCGACCCAAAGCCGTGCTACAAGCTGTAAGGCAGCTGATAAAGAAAGAAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099393.4 |
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